{"text_format":"2","workbook":"xlsx","n_sheets":8,"sheets":["DEEPEST-Fusion_TCGA_fusions","Recurrent_fusions","Novel_fusions","Novel_recurrent_fusions","Marker fusions","DEEPEST-Fusion_GTEx_fusions","TCGA_RNA_Seq_files","filtered_fusions_by_SBT"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"DEEPEST-Fusion_TCGA_fusions","index":0,"n_rows":36322,"n_cols":12,"rows_kept":4500,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["This sheet shows the coordinates, statistical scores and number of aligned reads for fusions called by DEEPEST-Fusion on TCGA tumor samples"]
["Note: in this sheet we provide all fusion variants of a specific gene pair that has been detected for each sample, but for the analyses throughout the paper all fusion variants of the same gene pair for a sample are collectively counted as one fusion"]
[]
["Column descriptions:"]
["junction:  the complete coordinate of the fusion junction in the format of chr1:gene1:pos1:strand1:chr2:gene2:pos2:strand2:type ",{"$nulls":4},"junction types: fusion: partners are on different chromosomes, strandcross: partners on the chromosome but on opposite strands, reg: partners on the same chromosome and strand and exons are joined in the canonical order, rev: partners on the same chromosome and strands but the exons are joind in the non-canonical order "]
["numReads: number of aligned reads to the fusion junction"]
["SBT_count: number of hits found by SBT query across the entire TCGA database"]
["DEEPEST-Fusion_count: number of times the junction is found by the first componenet of DEEPEST across the entire TCGA database"]
["DEEPEST-Fusion_count_2: number of samples for which both the first componenet of DEEPEST and SBT detects the fusion"]
["junction_cdf: the junction_cdf statistical score computed by the first componenet of DEEPEST"]
["emp.p: the empirical p-value computed by the first componenet"]
[]
["TCGA_Project","Sample","junction","fusion","gene_id_1","gene_id_2","numReads","SBT_count","DEEPEST-Fusion_count","DEEPEST-Fusion_count_2","junction_cdf","emp.p"]
["TCGA_ACC","TCGA-OR-A5J1-01A","12:LINC01089:121801707:-:17:HEXDC:82440997:+:fusion","LINC01089--HEXDC","ENSG00000139725","ENSG00000169660",80.0,1.0,1.0,1.0,0.627077487079378,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","12:NCAPD2:6494154:+:11:MRPL48:73805027:+:fusion","NCAPD2--MRPL48","ENSG00000010292","ENSG00000175581",29.0,1.0,1.0,1.0,0.775259322253748,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","12:SCARB1:124863595:-:17:UBB:16381902:+:fusion","SCARB1--UBB","ENSG00000073060","ENSG00000170315",2.0,1.0,1.0,1.0,0.825,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","14:MEG3:100826217:+:17:UBB:16381902:+:fusion","MEG3--UBB","ENSG00000214548","ENSG00000170315",2.0,1.0,1.0,1.0,0.283,0.0138408304498]
["TCGA_ACC","TCGA-OR-A5J1-01A","17:RPAIN:5422829:+:11:TAF10:6611818:-:fusion","RPAIN--TAF10","ENSG00000129197","ENSG00000166337",1.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","17:TBCD:82884202:+:9:GLIPR2:36147786:+:fusion","TBCD--GLIPR2","ENSG00000141556","ENSG00000122694",3.0,1.0,1.0,1.0,0.777,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","17:TBCD:82884202:+:9:GLIPR2:36162362:+:fusion","TBCD--GLIPR2","ENSG00000141556","ENSG00000122694",1.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","2:PCBP1-AS1:70051203:-:11:C2CD3:74013525:-:fusion","PCBP1-AS1--C2CD3","ENSG00000179818","ENSG00000168014",7.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:CWC27:64885546:+:5:PLPP1:55426039:-:strandcross","CWC27--PLPP1","ENSG00000153015","ENSG00000067113",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:DAB2:39392365:-:5:ARSB:78969192:-:rev","DAB2--ARSB","ENSG00000153071","ENSG00000113273",19.0,1.0,1.0,1.0,0.888760045616053,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:DAB2:39424804:-:5:COL4A3BP:75459181:-:rev","DAB2--COL4A3BP","ENSG00000113600","ENSG00000113163",4.0,1.0,1.0,1.0,0.844,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:HEXB:74697106:+:5:AC112206.2:67793083:+:rev","HEXB--AC112206.2","ENSG00000049860","ENSG00000249364",4.0,1.0,1.0,1.0,0.931,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:IL6ST:55951464:-:5:LINC00604:40267356:+:strandcross","IL6ST--LINC00604","ENSG00000134352","ENSG00000250585",28.0,1.0,1.0,1.0,0.890328425733631,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:MIER3:56935428:-:5:KIF2A:62385484:+:strandcross","MIER3--KIF2A","ENSG00000155545","ENSG00000068796",4.0,1.0,1.0,1.0,0.934,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:PARP8:50829961:+:5:ANKRD55:56116782:-:strandcross","PARP8--ANKRD55","ENSG00000151883","ENSG00000164512",2.0,1.0,1.0,1.0,0.863,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:PRLR:35230268:-:5:CLPTM1L:1318453:-:reg","PRLR--CLPTM1L","ENSG00000113494","ENSG00000049656",41.0,1.0,1.0,1.0,0.900212903050946,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKIV2L2:55379195:+:5:AC016642.1:58742000:-:strandcross","SKIV2L2--AC016642.1","ENSG00000039123","ENSG00000248475",100.0,1.0,1.0,1.0,0.878493975062284,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC008808.2:50966132:-:strandcross","SKP2--AC008808.2","ENSG00000145604","ENSG00000250360",6.0,1.0,1.0,1.0,0.627,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44777101:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",2.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44777328:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",5.0,1.0,1.0,1.0,0.499,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44786952:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",3.0,1.0,1.0,1.0,0.829,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:TBCA:77708242:-:5:ARSB:78839426:-:rev","TBCA--ARSB","ENSG00000171530","ENSG00000113273",5.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","11:LSP1:1853197:+:11:SYT8:1835097:+:rev","LSP1--SYT8","ENSG00000130592","ENSG00000149043",6.0,1.0,1.0,1.0,0.516,"NA"]
["TCGA_ACC","TCGA-OR-A5J1-01A","11:RBM14:66618561:+:11:BBS1:66515540:+:rev","RBM14--BBS1","ENSG00000239306","ENSG00000256349",7.0,1.0,1.0,1.0,0.693,"NA"]
["TCGA_ACC","TCGA-OR-A5J1-01A","3:PPP1R2:195542904:-:3:APOD:195569135:-:rev","PPP1R2--APOD","ENSG00000184203","ENSG00000189058",8.0,1.0,1.0,1.0,0.84,"NA"]
["TCGA_ACC","TCGA-OR-A5J3-01A","12:SLC11A2:51026315:-:12:POU6F1:51199868:-:rev","SLC11A2--POU6F1","ENSG00000110911","ENSG00000184271",1.0,1.0,1.0,1.0,0.833,"NA"]
["TCGA_ACC","TCGA-OR-A5J5-01A","7:CALN1:72412058:-:7:TYW1B:72575719:-:rev","CALN1--TYW1B","ENSG00000183166","ENSG00000277149",2.0,1.0,1.0,1.0,0.978,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65531683:+:16:AC012184.3:70316142:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",4.0,1.0,1.0,1.0,0.299,0.0192307692308]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65531683:+:16:AC012184.3:70317373:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",10.0,1.0,1.0,1.0,0.846,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65532805:+:16:AC012184.3:70316142:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",13.0,1.0,1.0,1.0,0.167,0.0384615384615]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65532805:+:16:AC012184.3:70317373:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",16.0,1.0,1.0,1.0,0.852744876988883,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","12:PEBP1:118139551:+:1:DENND4B:153936188:-:fusion","PEBP1--DENND4B","ENSG00000089220","ENSG00000198837",25.0,1.0,1.0,1.0,0.888864849000951,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:DLK1:100734428:+:7:ZNF138:64831451:+:fusion","DLK1--ZNF138","ENSG00000185559","ENSG00000197008",2.0,1.0,1.0,1.0,0.784,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","15:CSNK1G1:64355988:-:12:AC073896.1:56286645:-:fusion","CSNK1G1--AC073896.1","ENSG00000169118","ENSG00000062485",16.0,1.0,1.0,1.0,0.462999945129608,0.00641025641026]
["TCGA_ACC","TCGA-OR-A5J7-01A","17:NDEL1:8454887:+:20:KCNB1:49299383:-:fusion","NDEL1--KCNB1","ENSG00000166579","ENSG00000158445",2.0,1.0,1.0,1.0,0.657,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","17:NDEL1:8454887:+:20:KCNB1:49310799:-:fusion","NDEL1--KCNB1","ENSG00000166579","ENSG00000158445",6.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","19:SBNO2:1168694:-:19:TULP2:48889631:-:rev","SBNO2--TULP2","ENSG00000064932","ENSG00000104804",6.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","19:SBNO2:1174172:-:19:TULP2:48889631:-:rev","SBNO2--TULP2","ENSG00000064932","ENSG00000104804",3.0,1.0,1.0,1.0,0.297,0.0192307692308]
["TCGA_ACC","TCGA-OR-A5J7-01A","1:KIF1B:10232434:+:X:FAM58A:153596187:-:fusion","KIF1B--FAM58A","ENSG00000054523","ENSG00000262919",160.0,1.0,1.0,1.0,0.993824350640842,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","1:SCMH1:41033983:-:1:CA6:8949263:+:strandcross","SCMH1--CA6","ENSG00000010803","ENSG00000131686",25.0,1.0,1.0,1.0,0.77427102945965,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","1:SCMH1:41037362:-:1:CA6:8949263:+:strandcross","SCMH1--CA6","ENSG00000010803","ENSG00000131686",7.0,1.0,1.0,1.0,0.736,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","2:TMEM87B:112081118:+:8:PVT1:127890589:+:fusion","TMEM87B--PVT1","ENSG00000153214","ENSG00000249859",5.0,1.0,1.0,1.0,0.311,0.0128205128205]
["TCGA_ACC","TCGA-OR-A5J7-01A","2:TMEM87B:112081518:+:8:PVT1:127890589:+:fusion","TMEM87B--PVT1","ENSG00000153214","ENSG00000249859",2.0,1.0,1.0,1.0,0.904,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","7:GTF2I:74658068:+:1:FLAD1:154988105:+:fusion","GTF2I--FLAD1","ENSG00000263001","ENSG00000160688",14.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","7:GTF2I:74658068:+:1:FLAD1:154992565:+:fusion","GTF2I--FLAD1","ENSG00000263001","ENSG00000160688",3.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_ACC","TCGA-OR-A5J7-01A","7:GTF2I:74658068:+:1:FLAD1:154992713:+:fusion","GTF2I--FLAD1","ENSG00000263001","ENSG00000160688",3.0,1.0,1.0,1.0,0.66,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","8:PVT1:127794734:+:2:MERTK:111965191:+:fusion","PVT1--MERTK","ENSG00000249859","ENSG00000153208",3.0,1.0,1.0,1.0,0.559,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","9:AL157935.2:127885186:-:19:MED16:868946:-:fusion","AL157935.2--MED16","ENSG00000257524","ENSG00000175221",3.0,1.0,1.0,1.0,0.357,0.00961538461538]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:AP2A2:977224:+:11:DRD4:639433:+:rev","AP2A2--DRD4","ENSG00000183020","ENSG00000069696",10.0,1.0,1.0,1.0,0.673,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:AP2A2:977224:+:11:DRD4:640401:+:rev","AP2A2--DRD4","ENSG00000183020","ENSG00000069696",12.0,1.0,1.0,1.0,0.948,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:LSP1:1871412:+:11:SYT8:1828542:+:rev","LSP1--SYT8","ENSG00000130592","ENSG00000149043",20.0,1.0,1.0,1.0,0.859379534913208,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:ELMSAN1:73787102:-:14:ALDH6A1:74075017:-:rev","ELMSAN1--ALDH6A1","ENSG00000156030","ENSG00000119711",3.0,1.0,1.0,1.0,0.704,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:LIN52:74095985:+:14:AC005520.2:73789027:+:rev","LIN52--AC005520.2","ENSG00000205659","ENSG00000259065",2.0,1.0,1.0,1.0,0.705,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:RCOR1:102681978:+:14:PPP2R5C:101856686:+:rev","RCOR1--PPP2R5C","ENSG00000089902","ENSG00000078304",6.0,1.0,1.0,1.0,0.731,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","16:RAB11FIP3:461497:+:16:NME4:398990:+:rev","RAB11FIP3--NME4","ENSG00000090565","ENSG00000103202",12.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","17:NFE2L1:48048462:+:17:NPEPPS:47596353:+:rev","NFE2L1--NPEPPS","ENSG00000082641","ENSG00000141279",7.0,1.0,1.0,1.0,0.853,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","17:NFE2L1:48048864:+:17:NPEPPS:47596353:+:rev","NFE2L1--NPEPPS","ENSG00000082641","ENSG00000141279",8.0,1.0,1.0,1.0,0.665,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","19:PRX:40398620:-:19:BLVRB:40448046:-:rev","PRX--BLVRB","ENSG00000105227","ENSG00000090013",47.0,1.0,2.0,1.0,0.597315528931003,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","21:IFNAR1:33325131:+:21:IL10RB:33288104:+:rev","IFNAR1--IL10RB","ENSG00000142166","ENSG00000243646",9.0,1.0,1.0,1.0,0.86,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","22:MKL1:40463221:-:22:SLC25A17:40779125:-:rev","MKL1--SLC25A17","ENSG00000196588","ENSG00000100372",3.0,1.0,1.0,1.0,0.5,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","2:CEP68:65056528:+:2:AC012368.1:64201748:+:rev","CEP68--AC012368.1","ENSG00000011523","ENSG00000225889",3.0,1.0,1.0,1.0,0.759,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","2:PGAP1:196885424:-:2:HSPD1:197497392:-:rev","PGAP1--HSPD1","ENSG00000197121","ENSG00000144381",10.0,1.0,1.0,1.0,0.425,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","3:ITGA9:37629336:+:3:GOLGA4:37302185:+:rev","ITGA9--GOLGA4","ENSG00000144668","ENSG00000144674",6.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","3:RAF1:12663813:-:3:TMEM40:12738588:-:rev","RAF1--TMEM40","ENSG00000132155","ENSG00000088726",2.0,1.0,1.0,1.0,0.709,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","3:RAF1:12663813:-:3:TMEM40:12742507:-:rev","RAF1--TMEM40","ENSG00000132155","ENSG00000088726",19.0,1.0,1.0,1.0,0.850789104278899,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","4:SCD5:82798306:-:4:SEC31A:82844509:-:rev","SCD5--SEC31A","ENSG00000145284","ENSG00000138674",2.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_ACC","TCGA-OR-A5J8-01A","11:CAPRIN1:34090678:+:11:CD151:838133:+:rev","CAPRIN1--CD151","ENSG00000135387","ENSG00000177697",14.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_ACC","TCGA-OR-A5J8-01A","1:ENO1:8874824:-:1:PRDX1:45519054:-:rev","ENO1--PRDX1","ENSG00000074800","ENSG00000117450",3.0,1.0,1.0,1.0,0.603,0.00712589073634]
["TCGA_ACC","TCGA-OR-A5J8-01A","1:ZNF670:247078594:-:6:LINC00240:27023254:+:fusion","ZNF670--LINC00240","ENSG00000135747","ENSG00000224843",2.0,1.0,1.0,1.0,0.822,0.00237529691211]
["TCGA_ACC","TCGA-OR-A5J8-01A","3:EDEM1:5199695:+:14:AC247036.6:106108278:-:fusion","EDEM1--AC247036.6","ENSG00000134109","ENSG00000282651",2.0,1.0,1.0,1.0,0.69,0.00475059382423]
["TCGA_ACC","TCGA-OR-A5J8-01A","3:EDEM1:5199695:+:14:IGHV3-11:106116941:-:fusion","EDEM1--IGHV3-11","ENSG00000134109","ENSG00000211941",3.0,1.0,1.0,1.0,0.804,0.00475059382423]
["TCGA_ACC","TCGA-OR-A5J8-01A","6:AARS2:44310299:-:6:SPATS1:44360446:+:strandcross","AARS2--SPATS1","ENSG00000124608","ENSG00000272442",28.0,1.0,1.0,1.0,0.621626507263798,0.00363636363636]
["TCGA_ACC","TCGA-OR-A5J8-01A","6:AARS2:44310994:-:6:SPATS1:44360446:+:strandcross","AARS2--SPATS1","ENSG00000124608","ENSG00000272442",362.0,1.0,1.0,1.0,0.999995333444088,0.0]
["TCGA_ACC","TCGA-OR-A5J8-01A","6:AARS2:44310994:-:6:SPATS1:44361831:+:strandcross","AARS2--SPATS1","ENSG00000124608","ENSG00000272442",5.0,1.0,1.0,1.0,0.676,0.00363636363636]
["TCGA_ACC","TCGA-OR-A5J8-01A","6:NFKBIE:44264982:-:6:FBXO9:53071057:+:strandcross","NFKBIE--FBXO9","ENSG00000146232","ENSG00000112146",5.0,1.0,1.0,1.0,0.803,0.00475059382423]
["TCGA_ACC","TCGA-OR-A5J8-01A","7:EIF4H:74174442:+:6:AARS2:44312263:-:fusion","EIF4H--AARS2","ENSG00000106682","ENSG00000124608",152.0,1.0,1.0,1.0,0.974742838949366,0.0]
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["TCGA_ACC","TCGA-OR-A5KX-01A","19:FKBP8:18541679:-:19:HAUS8:17073335:-:reg","FKBP8--HAUS8","ENSG00000105701","ENSG00000131351",7.0,1.0,1.0,1.0,0.196,0.040293040293]
["TCGA_ACC","TCGA-OR-A5KX-01A","19:ZNF626:20661444:-:19:ADGRE5:14388450:+:strandcross","ZNF626--ADGRE5","ENSG00000269110","ENSG00000123146",2.0,1.0,1.0,1.0,0.247,0.040293040293]
["TCGA_ACC","TCGA-OR-A5KX-01A","5:CDH12:22505270:-:8:BNIP3L:26505307:+:fusion","CDH12--BNIP3L","ENSG00000154162","ENSG00000104765",5.0,1.0,1.0,1.0,0.448,0.00732600732601]
["TCGA_ACC","TCGA-OR-A5KX-01A","5:PRLR:35118061:-:5:CDH12:22505364:-:reg","PRLR--CDH12","ENSG00000113494","ENSG00000154162",8.0,1.0,1.0,1.0,0.661,0.0]
["TCGA_ACC","TCGA-OR-A5KX-01A","5:TARS:33463825:+:12:AC090503.2:73129161:-:fusion","TARS--AC090503.2","ENSG00000113407","ENSG00000258294",2.0,1.0,1.0,1.0,0.227,0.040293040293]
["TCGA_ACC","TCGA-OR-A5KX-01A","5:TARS:33466985:+:12:AC090503.2:73129161:-:fusion","TARS--AC090503.2","ENSG00000113407","ENSG00000258294",7.0,1.0,1.0,1.0,0.679,0.0]
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["TCGA_ACC","TCGA-OR-A5KX-01A","14:DLST:74894409:+:14:YLPM1:74797580:+:rev","DLST--YLPM1","ENSG00000119689","ENSG00000119596",1.0,1.0,1.0,1.0,0.981,"NA"]
["TCGA_ACC","TCGA-OR-A5KX-01A","16:AC005736.2:3943260:-:16:UBALD1:4610555:-:rev","AC005736.2--UBALD1","ENSG00000262888","ENSG00000153443",2.0,1.0,1.0,1.0,0.404,"NA"]
["TCGA_ACC","TCGA-OR-A5KX-01A","8:PPP1R16A:144490212:+:8:SLC52A2:144359188:+:rev","PPP1R16A--SLC52A2","ENSG00000160972","ENSG00000185803",1.0,1.0,1.0,1.0,0.841,"NA"]
["TCGA_ACC","TCGA-OR-A5KY-01A","11:TSPAN18:44727287:+:19:AC007192.1:18166160:+:fusion","TSPAN18--AC007192.1","ENSG00000157570","ENSG00000105647",11.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_ACC","TCGA-OR-A5KY-01A","12:ALDH2:111798242:+:7:ACTB:5529663:-:fusion","ALDH2--ACTB","ENSG00000111275","ENSG00000075624",3.0,1.0,1.0,1.0,0.19,0.043321299639]
["TCGA_ACC","TCGA-OR-A5KY-01A","17:CHD3:7893935:+:17:RAD51C:58709859:+:reg","CHD3--RAD51C","ENSG00000170004","ENSG00000108384",28.0,1.0,1.0,1.0,0.86313919327163,0.0]
["TCGA_ACC","TCGA-OR-A5KY-01A","18:FHOD3:36372744:+:14:ESRRB:76482016:+:fusion","FHOD3--ESRRB","ENSG00000134775","ENSG00000119715",4.0,1.0,1.0,1.0,0.833,0.0]
["TCGA_ACC","TCGA-OR-A5KY-01A","20:B4GALT5:49713576:-:20:ASIP:34260365:+:strandcross","B4GALT5--ASIP","ENSG00000158470","ENSG00000101440",33.0,1.0,1.0,1.0,0.856223344630474,0.0]
["TCGA_ACC","TCGA-OR-A5KY-01A","2:ASB3:53786821:-:2:MTA3:42640173:+:strandcross","ASB3--MTA3","ENSG00000115239","ENSG00000057935",4.0,1.0,1.0,1.0,0.8,0.00361010830325]
["TCGA_ACC","TCGA-OR-A5KY-01A","3:NBEAL2:47002802:+:1:AL589765.4:151763501:-:fusion","NBEAL2--AL589765.4","ENSG00000160796","ENSG00000249602",3.0,1.0,1.0,1.0,0.788,0.00361010830325]
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["TCGA_ACC","TCGA-OR-A5KY-01A","19:PPP1R37:45093527:+:19:BCAM:44811225:+:rev","PPP1R37--BCAM","ENSG00000104866","ENSG00000187244",13.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_ACC","TCGA-OR-A5KY-01A","2:AHSA2:61186497:+:2:C2orf74:61162842:+:rev","AHSA2--C2orf74","ENSG00000173209","ENSG00000274769",2.0,1.0,1.0,1.0,0.986,"NA"]
["TCGA_ACC","TCGA-OR-A5KY-01A","2:PPP1CB:28751820:+:2:BABAM2:28298338:+:rev","PPP1CB--BABAM2","ENSG00000213639","ENSG00000158019",3.0,1.0,1.0,1.0,0.595,"NA"]
["TCGA_ACC","TCGA-OR-A5KZ-01A","7:VPS41:38754702:-:7:CEP41:130428018:-:rev","VPS41--CEP41","ENSG00000006715","ENSG00000106477",4.0,1.0,1.0,1.0,0.872,0.0]
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["TCGA_ACC","TCGA-OR-A5L4-01A","2:LINC01816:70125046:-:2:C2orf42:70150564:-:rev","LINC01816--C2orf42","ENSG00000231327","ENSG00000115998",2.0,2.0,2.0,2.0,0.752,"NA"]
["TCGA_ACC","TCGA-OR-A5L5-01A","15:AC026523.1:97558901:-:15:LINC00923:97653223:-:rev","AC026523.1--LINC00923","ENSG00000259582","ENSG00000251209",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_ACC","TCGA-OR-A5L6-01A","12:PLBD2:113358890:+:3:CIDEC:9878511:-:fusion","PLBD2--CIDEC","ENSG00000151176","ENSG00000187288",37.0,1.0,1.0,1.0,0.952826560502071,0.0]
["TCGA_ACC","TCGA-OR-A5L6-01A","2:CLK1:200854616:-:8:NAPRT:143577943:-:fusion","CLK1--NAPRT","ENSG00000013441","ENSG00000147813",21.0,1.0,1.0,1.0,0.823403668573383,0.0]
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["TCGA_ACC","TCGA-OR-A5LA-01A","19:LDLR:11107514:+:19:SMARCA4:11061784:+:rev","LDLR--SMARCA4","ENSG00000130164","ENSG00000127616",2.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_ACC","TCGA-OR-A5LB-01A","3:FAM19A4:68880730:-:3:TMF1:69048562:-:rev","FAM19A4--TMF1","ENSG00000163377","ENSG00000144747",11.0,1.0,1.0,1.0,0.659,"NA"]
["TCGA_ACC","TCGA-OR-A5LD-01A","7:AUTS2:70698620:+:16:CDH8:61901473:-:fusion","AUTS2--CDH8","ENSG00000158321","ENSG00000150394",4.0,1.0,1.0,1.0,0.818,0.0]
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["TCGA_ACC","TCGA-OR-A5LD-01A","11:GANAB:62646562:-:11:AP001458.2:62663333:-:rev","GANAB--AP001458.2","ENSG00000089597","ENSG00000255432",1.0,2.0,2.0,2.0,0.884,"NA"]
["TCGA_ACC","TCGA-OR-A5LD-01A","19:CSNK1G2:1969959:+:19:ADAT3:1911890:+:rev","CSNK1G2--ADAT3","ENSG00000133275","ENSG00000213638",4.0,1.0,1.0,1.0,0.986,"NA"]
["TCGA_ACC","TCGA-OR-A5LG-01A","16:FTO:53934109:+:11:AC090124.1:29336082:-:fusion","FTO--AC090124.1","ENSG00000140718","ENSG00000254530",64.0,1.0,1.0,1.0,0.98015889704947,0.0]
["TCGA_ACC","TCGA-OR-A5LG-01A","16:FTO:53934109:+:11:AC090124.1:29395452:-:fusion","FTO--AC090124.1","ENSG00000140718","ENSG00000254530",3.0,1.0,1.0,1.0,0.789,0.00333333333333]
["TCGA_ACC","TCGA-OR-A5LG-01A","14:MED6:70596611:-:14:MAP3K9:70761182:-:rev","MED6--MAP3K9","ENSG00000133997","ENSG00000006432",2.0,1.0,1.0,1.0,0.548,"NA"]
["TCGA_ACC","TCGA-OR-A5LG-01A","3:SLCO2A1:133973663:-:3:RYK:134222539:-:rev","SLCO2A1--RYK","ENSG00000174640","ENSG00000163785",1.0,1.0,1.0,1.0,0.856,"NA"]
["TCGA_ACC","TCGA-OR-A5LH-01A","4:DCLK2:150102812:+:4:LRBA:150325898:-:strandcross","DCLK2--LRBA","ENSG00000170390","ENSG00000198589",3.0,1.0,1.0,1.0,0.747,0.00518134715026]
["TCGA_ACC","TCGA-OR-A5LJ-01A","2:TNS1:217835091:-:2:CATIP-AS2:218327959:-:rev","TNS1--CATIP-AS2","ENSG00000079308","ENSG00000237281",11.0,1.0,1.0,1.0,0.6,"NA"]
["TCGA_ACC","TCGA-OR-A5LL-01A","1:ADGRL2:81981976:+:1:AL034417.2:8121474:+:rev","ADGRL2--AL034417.2","ENSG00000117114","ENSG00000238290",7.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_ACC","TCGA-OR-A5LL-01A","1:TRAF5:211326889:+:1:LINC01774:208975036:+:rev","TRAF5--LINC01774","ENSG00000082512","ENSG00000236950",3.0,1.0,1.0,1.0,0.871,0.0134529147982]
["TCGA_ACC","TCGA-OR-A5LL-01A","8:ASPH:61618978:-:8:ATP6V1H:53716024:-:reg","ASPH--ATP6V1H","ENSG00000198363","ENSG00000047249",2.0,1.0,1.0,1.0,0.724,0.0134529147982]
["TCGA_ACC","TCGA-OR-A5LM-01A","4:RNF4:2469258:+:4:AC016687.2:33979740:+:reg","RNF4--AC016687.2","ENSG00000063978","ENSG00000250723",2.0,1.0,1.0,1.0,0.832,0.00470588235294]
["TCGA_ACC","TCGA-OR-A5LM-01A","6:CMTR1:37473601:+:6:SMIM13:11134403:+:rev","CMTR1--SMIM13","ENSG00000137200","ENSG00000224531",9.0,1.0,1.0,1.0,0.344,0.0141176470588]
["TCGA_ACC","TCGA-OR-A5LM-01A","6:SMIM13:11094389:+:6:RCAN2:46456978:-:strandcross","SMIM13--RCAN2","ENSG00000224531","ENSG00000172348",7.0,1.0,1.0,1.0,0.56,0.0117647058824]
["TCGA_ACC","TCGA-OR-A5LN-01A","19:UBA52:18572607:+:10:ATP5C1:7802270:+:fusion","UBA52--ATP5C1","ENSG00000221983","ENSG00000165629",3.0,3.0,1.0,1.0,0.308,0.019801980198]
["TCGA_ACC","TCGA-OR-A5LO-01A","11:RAB6A:73760566:-:11:LRP4-AS1:46873074:+:strandcross","RAB6A--LRP4-AS1","ENSG00000175582","ENSG00000247675",72.0,1.0,1.0,1.0,0.651857798017074,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","16:CYB5B:69448144:+:16:AC012184.3:70333960:-:strandcross","CYB5B--AC012184.3","ENSG00000103018","ENSG00000261777",2.0,1.0,1.0,1.0,0.915,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","16:CYB5B:69459121:+:16:AC012184.3:70333960:-:strandcross","CYB5B--AC012184.3","ENSG00000103018","ENSG00000261777",3.0,1.0,1.0,1.0,0.869,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","17:WRAP53:7689701:+:20:AHCY:34281165:-:fusion","WRAP53--AHCY","ENSG00000141499","ENSG00000101444",7.0,1.0,1.0,1.0,0.949,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","19:PGPEP1:18342911:+:1:ALPL:21553978:+:fusion","PGPEP1--ALPL","ENSG00000130517","ENSG00000162551",15.0,1.0,1.0,1.0,0.361,0.0137457044674]
["TCGA_ACC","TCGA-OR-A5LO-01A","1:CAPZB:19485436:-:6:MUC22:31025502:+:fusion","CAPZB--MUC22","ENSG00000077549","ENSG00000261272",3.0,1.0,1.0,1.0,0.903,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","1:MINOS1:19597109:+:16:GSE1:85665976:+:fusion","MINOS1--GSE1","ENSG00000173436","ENSG00000131149",15.0,1.0,1.0,1.0,0.966,0.00687285223368]
["TCGA_ACC","TCGA-OR-A5LO-01A","1:TMEM57:25458892:+:19:AC005329.2:1377086:-:fusion","TMEM57--AC005329.2","ENSG00000204178","ENSG00000267755",18.0,1.0,1.0,1.0,0.874602897828997,0.00687285223368]
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["TCGA_ACC","TCGA-OR-A5LO-01A","11:CELF1:47483453:-:11:FNBP4:47720086:-:rev","CELF1--FNBP4","ENSG00000149187","ENSG00000109920",17.0,1.0,1.0,1.0,0.809687332068625,"NA"]
["TCGA_ACC","TCGA-OR-A5LO-01A","12:PXN:120265617:-:12:PLA2G1B:120326020:-:rev","PXN--PLA2G1B","ENSG00000089159","ENSG00000170890",76.0,4.0,2.0,2.0,0.978435858416552,"NA"]
["TCGA_ACC","TCGA-OR-A5LO-01A","16:RAB40C:618260:+:16:PRR35:563256:+:rev","RAB40C--PRR35","ENSG00000197562","ENSG00000161992",7.0,1.0,1.0,1.0,0.89,"NA"]
["TCGA_ACC","TCGA-OR-A5LO-01A","19:MEGF8:42326430:+:19:AC010247.2:42155707:+:rev","MEGF8--AC010247.2","ENSG00000105429","ENSG00000259436",2.0,1.0,1.0,1.0,0.582,"NA"]
["TCGA_ACC","TCGA-OR-A5LO-01A","9:FCN2:134886564:+:9:COL5A1:134822998:+:rev","FCN2--COL5A1","ENSG00000160339","ENSG00000130635",10.0,1.0,1.0,1.0,0.551,"NA"]
["TCGA_ACC","TCGA-OR-A5LO-01A","X:REPS2:17006344:+:X:TXLNG:16818574:+:rev","REPS2--TXLNG","ENSG00000169891","ENSG00000086712",2.0,1.0,1.0,1.0,0.723,"NA"]
["TCGA_ACC","TCGA-OU-A5PI-01A","20:PLCB1:8757178:+:19:WTIP:34490376:+:fusion","PLCB1--WTIP","ENSG00000182621","ENSG00000142279",3.0,1.0,1.0,1.0,0.721,0.00990099009901]
["TCGA_ACC","TCGA-OU-A5PI-01A","7:HNRNPA2B1:26200572:-:X:HSD17B10:53433886:-:fusion","HNRNPA2B1--HSD17B10","ENSG00000122566","ENSG00000072506",5.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_ACC","TCGA-OU-A5PI-01A","16:ST3GAL2:70438949:-:16:VAC14:70772172:-:rev","ST3GAL2--VAC14","ENSG00000157350","ENSG00000103043",2.0,1.0,1.0,1.0,0.784,"NA"]
["TCGA_ACC","TCGA-OU-A5PI-01A","18:FHOD3:36372744:+:18:ELP2:36142826:+:rev","FHOD3--ELP2","ENSG00000134775","ENSG00000134759",4.0,1.0,1.0,1.0,0.766,"NA"]
["TCGA_ACC","TCGA-OU-A5PI-01A","18:FHOD3:36372744:+:18:ELP2:36144939:+:rev","FHOD3--ELP2","ENSG00000134775","ENSG00000134759",2.0,1.0,1.0,1.0,0.859,"NA"]
["TCGA_ACC","TCGA-OU-A5PI-01A","18:SMAD2:47930361:-:18:ZBTB7C:48041123:-:rev","SMAD2--ZBTB7C","ENSG00000175387","ENSG00000184828",3.0,1.0,1.0,1.0,0.616,"NA"]
["TCGA_ACC","TCGA-P6-A5OF-01A","16:YPEL3:30095252:-:9:EXD3:137324143:-:fusion","YPEL3--EXD3","ENSG00000090238","ENSG00000187609",48.0,1.0,1.0,1.0,0.962226564946945,0.0]
["TCGA_ACC","TCGA-P6-A5OF-01A","19:ZNF536:30284141:+:19:AC007786.1:29215281:+:rev","ZNF536--AC007786.1","ENSG00000198597","ENSG00000267498",3.0,1.0,1.0,1.0,0.426,0.0108695652174]
["TCGA_ACC","TCGA-P6-A5OF-01A","1:GNB1:1839190:-:16:TSC2:2079032:+:fusion","GNB1--TSC2","ENSG00000078369","ENSG00000103197",8.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_ACC","TCGA-P6-A5OF-01A","1:GNB1:1839190:-:16:TSC2:2079035:+:fusion","GNB1--TSC2","ENSG00000078369","ENSG00000103197",2.0,1.0,1.0,1.0,0.737,0.0036231884058]
["TCGA_ACC","TCGA-P6-A5OF-01A","5:DCP2:112992770:+:5:IL17B:149377025:-:strandcross","DCP2--IL17B","ENSG00000172795","ENSG00000127743",10.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_ACC","TCGA-P6-A5OF-01A","1:AHDC1:27603397:-:1:FGR:27625151:-:rev","AHDC1--FGR","ENSG00000126705","ENSG00000000938",2.0,2.0,1.0,1.0,0.748,"NA"]
["TCGA_ACC","TCGA-P6-A5OF-01A","2:EML6:54820462:+:2:ACYP2:54304688:+:rev","EML6--ACYP2","ENSG00000214595","ENSG00000170634",1.0,1.0,1.0,1.0,0.942,"NA"]
["TCGA_ACC","TCGA-P6-A5OF-01A","3:FAM19A4:68932240:-:3:FRMD4B:69221923:-:rev","FAM19A4--FRMD4B","ENSG00000163377","ENSG00000114541",1.0,1.0,1.0,1.0,0.824,"NA"]
["TCGA_ACC","TCGA-P6-A5OF-01A","6:BCLAF1:136289713:-:6:MAP3K5:136614286:-:rev","BCLAF1--MAP3K5","ENSG00000029363","ENSG00000197442",2.0,1.0,1.0,1.0,0.895,"NA"]
["TCGA_ACC","TCGA-P6-A5OF-01A","8:CPSF1:144400924:-:8:TONSL:144429336:-:rev","CPSF1--TONSL","ENSG00000071894","ENSG00000160949",1.0,1.0,1.0,1.0,0.965,"NA"]
["TCGA_ACC","TCGA-P6-A5OG-01A","6:TRAM2:52576796:-:6:HCRTR2:55277380:+:strandcross","TRAM2--HCRTR2","ENSG00000065308","ENSG00000137252",2.0,1.0,1.0,1.0,0.971,0.00294117647059]
["TCGA_ACC","TCGA-PA-A5YG-01A","11:KCNQ1:2778037:+:11:DUSP8:1565934:-:strandcross","KCNQ1--DUSP8","ENSG00000053918","ENSG00000184545",19.0,1.0,1.0,1.0,0.838099783191625,0.00319488817891]
["TCGA_ACC","TCGA-PA-A5YG-01A","15:TPM1:63061273:+:19:KLK1:50820443:-:fusion","TPM1--KLK1","ENSG00000140416","ENSG00000167748",2.0,1.0,1.0,1.0,0.531,0.00958466453674]
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["TCGA_ACC","TCGA-PK-A5HA-01A","3:NEK4:52763470:-:3:TMEM110-MUSTN1:52855444:-:rev","NEK4--TMEM110-MUSTN1","ENSG00000114904","ENSG00000248592",1.0,1.0,1.0,1.0,0.902,"NA"]
["TCGA_ACC","TCGA-PK-A5HA-01A","8:MROH1:144148076:+:8:CYC1:144095833:+:rev","MROH1--CYC1","ENSG00000179832","ENSG00000179091",10.0,3.0,3.0,3.0,0.634,"NA"]
["TCGA_ACC","TCGA-PK-A5HA-01A","8:MROH1:144148076:+:8:CYC1:144096124:+:rev","MROH1--CYC1","ENSG00000179832","ENSG00000179091",38.0,3.0,3.0,3.0,0.930068501065113,"NA"]
["TCGA_ACC","TCGA-PK-A5HA-01A","8:MROH1:144148076:+:8:CYC1:144096337:+:rev","MROH1--CYC1","ENSG00000179832","ENSG00000179091",19.0,2.0,2.0,2.0,0.880216047704094,"NA"]
["TCGA_ACC","TCGA-PK-A5HA-01A","8:MROH1:144148712:+:8:CYC1:144095833:+:rev","MROH1--CYC1","ENSG00000179832","ENSG00000179091",1.0,2.0,2.0,2.0,0.805,"NA"]
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["TCGA_ACC","TCGA-PK-A5HA-01A","9:MAPKAP1:125706971:-:9:AL358074.1:125743937:-:rev","MAPKAP1--AL358074.1","ENSG00000119487","ENSG00000229582",2.0,1.0,1.0,1.0,0.491,"NA"]
["TCGA_ACC","TCGA-PK-A5HB-01A","9:RUSC2:35490172:+:X:PNMA6E:153398920:-:fusion","RUSC2--PNMA6E","ENSG00000198853","ENSG00000214897",49.0,1.0,1.0,1.0,0.700231356777699,0.0]
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["TCGA_ACC","TCGA-PK-A5HB-01A","10:PAPSS2:87727489:+:10:MINPP1:87552082:+:rev","PAPSS2--MINPP1","ENSG00000198682","ENSG00000107789",61.0,2.0,1.0,1.0,0.922947980740749,"NA"]
["TCGA_ACC","TCGA-PK-A5HB-01A","22:RRP7A:42519714:-:22:PACSIN2:42879169:-:rev","RRP7A--PACSIN2","ENSG00000189306","ENSG00000100266",6.0,1.0,1.0,1.0,0.678,"NA"]
["TCGA_BLCA","TCGA-2F-A9KO-01A","11:GUCY1A2:106776439:-:17:NLK:28185179:+:fusion","GUCY1A2--NLK","ENSG00000152402","ENSG00000087095",5.0,1.0,1.0,1.0,0.822,0.00411522633745]
["TCGA_BLCA","TCGA-2F-A9KO-01A","14:TOGARAM1:45054549:+:14:KCNK13:90184111:+:reg","TOGARAM1--KCNK13","ENSG00000198718","ENSG00000152315",10.0,1.0,1.0,1.0,0.999,0.0]
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["TCGA_BLCA","TCGA-2F-A9KO-01A","20:TAF4:62064451:-:20:OGFR-AS1:62802109:-:rev","TAF4--OGFR-AS1","ENSG00000130699","ENSG00000229873",3.0,1.0,1.0,1.0,0.679,"NA"]
["TCGA_BLCA","TCGA-2F-A9KO-01A","21:MIR548XHG:18737924:-:21:AL157359.2:18918217:-:rev","MIR548XHG--AL157359.2","ENSG00000224141","ENSG00000232193",3.0,1.0,1.0,1.0,0.749,"NA"]
["TCGA_BLCA","TCGA-2F-A9KO-01A","5:CANX:179709059:+:5:RUFY1:179593478:+:rev","CANX--RUFY1","ENSG00000127022","ENSG00000176783",16.0,1.0,1.0,1.0,0.861572295575936,"NA"]
["TCGA_BLCA","TCGA-2F-A9KO-01A","8:EIF3E:108248613:-:8:AC104248.1:109044127:-:rev","EIF3E--AC104248.1","ENSG00000104408","ENSG00000253796",2.0,1.0,1.0,1.0,0.906,"NA"]
["TCGA_BLCA","TCGA-2F-A9KP-01A","10:GBF1:102344182:+:9:UBE2R2:33886881:+:fusion","GBF1--UBE2R2","ENSG00000107862","ENSG00000107341",5.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_BLCA","TCGA-2F-A9KP-01A","11:PHF21A:46076754:-:16:NUTF2:67868340:+:fusion","PHF21A--NUTF2","ENSG00000135365","ENSG00000102898",26.0,1.0,1.0,1.0,0.84636552576766,0.00531914893617]
["TCGA_BLCA","TCGA-2F-A9KP-01A","14:DHRS2:23630235:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,4.0,4.0,3.0,0.727,0.00531914893617]
["TCGA_BLCA","TCGA-2F-A9KP-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",3.0,44.0,40.0,34.0,0.373,0.0212765957447]
["TCGA_BLCA","TCGA-2F-A9KP-01A","16:NFATC3:68191775:+:15:AC091117.2:45050666:-:fusion","NFATC3--AC091117.2","ENSG00000072736","ENSG00000259418",2.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_BLCA","TCGA-2F-A9KP-01A","17:PGAP3:39684597:-:17:ERBB2:39727689:+:strandcross","PGAP3--ERBB2","ENSG00000161395","ENSG00000141736",21.0,1.0,1.0,1.0,0.532705249319752,0.00625]
["TCGA_BLCA","TCGA-2F-A9KP-01A","1:EPB41:28997319:+:8:HGSNAT:43158575:+:fusion","EPB41--HGSNAT","ENSG00000159023","ENSG00000165102",79.0,1.0,1.0,1.0,0.982567857208453,0.0]
["TCGA_BLCA","TCGA-2F-A9KP-01A","1:EPB41:28997319:+:8:HGSNAT:43158923:+:fusion","EPB41--HGSNAT","ENSG00000159023","ENSG00000165102",2.0,1.0,1.0,1.0,0.737,0.00531914893617]
["TCGA_BLCA","TCGA-2F-A9KP-01A","1:ST3GAL3:43707693:+:8:ZMAT4:40532238:-:fusion","ST3GAL3--ZMAT4","ENSG00000126091","ENSG00000165061",1.0,1.0,1.0,1.0,0.824,0.00531914893617]
["TCGA_BLCA","TCGA-2F-A9KP-01A","1:ST3GAL3:43736380:+:8:ZMAT4:40532238:-:fusion","ST3GAL3--ZMAT4","ENSG00000126091","ENSG00000165061",20.0,1.0,1.0,1.0,0.86838969514575,0.00531914893617]
["TCGA_BLCA","TCGA-2F-A9KP-01A","20:SYS1-DBNDD2:45363693:+:8:IDO2:40015247:+:fusion","SYS1-DBNDD2--IDO2","ENSG00000204070","ENSG00000188676",3.0,1.0,1.0,1.0,0.573,0.0159574468085]
["TCGA_BLCA","TCGA-2F-A9KP-01A","20:SYS1:45365686:+:8:IDO2:40015247:+:fusion","SYS1--IDO2","ENSG00000204070","ENSG00000188676",44.0,1.0,1.0,1.0,0.939910055489073,0.0]
["TCGA_BLCA","TCGA-2F-A9KP-01A","5:SEMA5A:9437756:-:17:MYHAS:10608354:+:fusion","SEMA5A--MYHAS","ENSG00000112902","ENSG00000272975",4.0,1.0,1.0,1.0,0.334,0.0212765957447]
["TCGA_BLCA","TCGA-2F-A9KP-01A","8:HGSNAT:43197025:+:8:AC105999.2:40299454:-:strandcross","HGSNAT--AC105999.2","ENSG00000165102","ENSG00000253802",82.0,1.0,1.0,1.0,0.959558707141864,0.0]
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["TCGA_BLCA","TCGA-2F-A9KP-01A","12:AC023055.1:55817666:-:12:PAN2:56328641:-:rev","AC023055.1--PAN2","ENSG00000205323","ENSG00000135473",20.0,1.0,1.0,1.0,0.856661212024867,"NA"]
["TCGA_BLCA","TCGA-2F-A9KP-01A","14:TRMT61A:103530309:+:14:AMN:102928426:+:rev","TRMT61A--AMN","ENSG00000166166","ENSG00000166126",4.0,1.0,1.0,1.0,0.895,"NA"]
["TCGA_BLCA","TCGA-2F-A9KP-01A","3:IP6K1:49738212:-:3:MON1A:49913359:-:rev","IP6K1--MON1A","ENSG00000176095","ENSG00000164077",17.0,1.0,1.0,1.0,0.84183723882308,"NA"]
["TCGA_BLCA","TCGA-2F-A9KP-01A","3:RAF1:12663813:-:3:IQSEC1:12941865:-:rev","RAF1--IQSEC1","ENSG00000132155","ENSG00000144711",4.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_BLCA","TCGA-2F-A9KQ-01A","1:EDEM3:184723751:-:1:SMG7-AS1:183461668:-:reg","EDEM3--SMG7-AS1","ENSG00000116406","ENSG00000232860",21.0,1.0,1.0,1.0,0.534107558523089,0.0208333333333]
["TCGA_BLCA","TCGA-2F-A9KQ-01A","1:EDEM3:184723751:-:1:SMG7-AS1:183461839:-:reg","EDEM3--SMG7-AS1","ENSG00000116406","ENSG00000232860",55.0,1.0,1.0,1.0,0.776160017991274,0.00694444444444]
["TCGA_BLCA","TCGA-2F-A9KR-01A","17:MSI2:57652161:+:17:BCAS3:60808004:+:reg","MSI2--BCAS3","ENSG00000153944","ENSG00000141376",15.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_BLCA","TCGA-2F-A9KR-01A","1:ZNF326:89995273:+:1:CCDC18:93226333:+:reg","ZNF326--CCDC18","ENSG00000162664","ENSG00000122483",18.0,1.0,1.0,1.0,0.841331153739189,0.0077519379845]
["TCGA_BLCA","TCGA-2F-A9KT-01A","11:GSTP1:67586211:+:11:ELP4:31650115:+:rev","GSTP1--ELP4","ENSG00000084207","ENSG00000109911",3.0,1.0,1.0,1.0,0.201,0.020202020202]
["TCGA_BLCA","TCGA-2F-A9KT-01A","20:RALY:34031604:+:20:TTI1:38006397:-:strandcross","RALY--TTI1","ENSG00000125970","ENSG00000101407",7.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-2F-A9KT-01A","16:WWP2:69762391:+:16:SNTB2:69299590:+:rev","WWP2--SNTB2","ENSG00000198373","ENSG00000168807",1.0,1.0,1.0,1.0,0.927,"NA"]
["TCGA_BLCA","TCGA-2F-A9KT-01A","16:WWP2:69776241:+:16:SNTB2:69299590:+:rev","WWP2--SNTB2","ENSG00000198373","ENSG00000168807",3.0,1.0,1.0,1.0,0.532,"NA"]
["TCGA_BLCA","TCGA-2F-A9KW-01A","12:LRIG3:58876445:-:12:LINC02231:64921070:-:rev","LRIG3--LINC02231","ENSG00000139263","ENSG00000248995",38.0,1.0,1.0,1.0,0.596506753474433,0.0168539325843]
["TCGA_BLCA","TCGA-2F-A9KW-01A","12:LRIG3:58876445:-:12:LINC02231:64957857:-:rev","LRIG3--LINC02231","ENSG00000139263","ENSG00000248995",62.0,1.0,1.0,1.0,0.869166910577854,0.00561797752809]
["TCGA_BLCA","TCGA-2F-A9KW-01A","3:VGLL4:11601833:-:3:TMEM40:12749840:-:rev","VGLL4--TMEM40","ENSG00000144560","ENSG00000088726",11.0,1.0,1.0,1.0,0.89,0.00561797752809]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:CDS1:84609525:+:2:UGT1A5:233767034:+:fusion","CDS1--UGT1A5","ENSG00000163624","ENSG00000242366",28.0,1.0,1.0,1.0,0.856724582510807,0.00561797752809]
["TCGA_BLCA","TCGA-2F-A9KW-01A","9:IPPK:92634386:-:1:CDC42SE1:151059773:-:fusion","IPPK--CDC42SE1","ENSG00000127080","ENSG00000197622",3.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:LIMCH1:41359803:+:4:UCHL1:41256593:+:rev","LIMCH1--UCHL1","ENSG00000064042","ENSG00000154277",10.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:LIMCH1:41359803:+:4:UCHL1:41263225:+:rev","LIMCH1--UCHL1","ENSG00000064042","ENSG00000154277",8.0,1.0,1.0,1.0,0.517,"NA"]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:LIMCH1:41360936:+:4:UCHL1:41256593:+:rev","LIMCH1--UCHL1","ENSG00000064042","ENSG00000154277",22.0,1.0,2.0,1.0,0.870128790314,"NA"]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:LIMCH1:41360936:+:4:UCHL1:41263225:+:rev","LIMCH1--UCHL1","ENSG00000064042","ENSG00000154277",46.0,1.0,1.0,1.0,0.827582153700925,"NA"]
["TCGA_BLCA","TCGA-2F-A9KW-01A","4:LIMCH1:41360936:+:4:UCHL1:41264103:+:rev","LIMCH1--UCHL1","ENSG00000064042","ENSG00000154277",17.0,1.0,1.0,1.0,0.847385845206489,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","16:AC093515.1:7894253:-:16:FAM57B:30046387:-:rev","AC093515.1--FAM57B","ENSG00000260289","ENSG00000149926",5.0,1.0,1.0,1.0,0.786,0.0102564102564]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","16:USP31:23148638:-:16:PRKCB:23988508:+:strandcross","USP31--PRKCB","ENSG00000103404","ENSG00000166501",7.0,1.0,1.0,1.0,0.243,0.0307692307692]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","16:USP31:23148638:-:16:PRKCB:24032136:+:strandcross","USP31--PRKCB","ENSG00000103404","ENSG00000166501",3.0,1.0,1.0,1.0,0.982,0.0]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","17:TRIM37:59062567:-:3:ZNF385D:22169035:-:fusion","TRIM37--ZNF385D","ENSG00000108395","ENSG00000151789",9.0,1.0,1.0,1.0,0.507,0.0153846153846]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","19:IL4I1:49929417:-:19:VSTM2B:29563846:+:strandcross","IL4I1--VSTM2B","ENSG00000104951","ENSG00000187135",6.0,1.0,1.0,1.0,0.917,0.0]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","19:NUP62:49927694:-:19:VSTM2B:29563846:+:strandcross","NUP62--VSTM2B","ENSG00000104951","ENSG00000187135",174.0,1.0,1.0,1.0,0.992676991609776,0.0]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","19:NUP62:49929326:-:19:VSTM2B:29563846:+:strandcross","NUP62--VSTM2B","ENSG00000104951","ENSG00000187135",36.0,1.0,1.0,1.0,0.904820043517177,0.00512820512821]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","19:NUP62:49929350:-:19:VSTM2B:29563846:+:strandcross","NUP62--VSTM2B","ENSG00000213024","ENSG00000187135",4.0,1.0,1.0,1.0,0.876,0.00512820512821]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","9:MELK:36573007:+:9:CNTFR:34581205:-:strandcross","MELK--CNTFR","ENSG00000165304","ENSG00000122756",2.0,1.0,1.0,1.0,0.898,0.00512820512821]
["TCGA_BLCA","TCGA-4Z-AA7M-01A","17:PIGS:28556166:-:17:SPAG5:28578292:-:rev","PIGS--SPAG5","ENSG00000087111","ENSG00000076382",3.0,1.0,1.0,1.0,0.871,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7O-01A","11:PPFIA1:70272436:+:11:SHANK2:70698763:-:strandcross","PPFIA1--SHANK2","ENSG00000131626","ENSG00000162105",4.0,1.0,1.0,1.0,0.964,0.0]
["TCGA_BLCA","TCGA-4Z-AA7O-01A","11:RBM4B:66676668:-:11:FCHSD2:73015885:-:rev","RBM4B--FCHSD2","ENSG00000173914","ENSG00000137478",3.0,1.0,1.0,1.0,0.24,0.0398230088496]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","4:ACOX3:8374978:-:3:CD96:111665527:+:fusion","ACOX3--CD96","ENSG00000087008","ENSG00000153283",2.0,1.0,1.0,1.0,0.938,0.0]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","14:TOX4:21477564:+:14:AL161668.1:21116463:+:rev","TOX4--AL161668.1","ENSG00000092203","ENSG00000178107",10.0,1.0,1.0,1.0,0.499,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","17:PER1:8152337:-:17:AURKB:8205390:-:rev","PER1--AURKB","ENSG00000179094","ENSG00000178999",6.0,1.0,1.0,1.0,0.434,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","17:PER1:8156307:-:17:AURKB:8205390:-:rev","PER1--AURKB","ENSG00000179094","ENSG00000178999",5.0,1.0,1.0,1.0,0.46,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","17:RPS6KB1:59910611:+:17:VMP1:59838295:+:rev","RPS6KB1--VMP1","ENSG00000108443","ENSG00000062716",3.0,1.0,3.0,1.0,0.561,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","17:RPS6KB1:59914703:+:17:VMP1:59839768:+:rev","RPS6KB1--VMP1","ENSG00000108443","ENSG00000062716",56.0,2.0,2.0,1.0,0.974750554065468,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","1:FOXJ3:42227883:-:1:SVBP:42807500:-:rev","FOXJ3--SVBP","ENSG00000198815","ENSG00000177868",30.0,1.0,1.0,1.0,0.872673976575689,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","1:SKI:2229735:+:1:PRKCZ:2155995:+:rev","SKI--PRKCZ","ENSG00000157933","ENSG00000067606",4.0,2.0,4.0,1.0,0.447,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","3:MAP4:48088773:-:3:SPINK8:48309946:-:rev","MAP4--SPINK8","ENSG00000047849","ENSG00000229453",22.0,2.0,2.0,2.0,0.692780141398666,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","3:MLF1:158592581:+:3:RSRC1:158543335:+:rev","MLF1--RSRC1","ENSG00000178053","ENSG00000174891",5.0,1.0,1.0,1.0,0.786,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","3:NCK1:136862319:+:3:PCCB:136283837:+:rev","NCK1--PCCB","ENSG00000158092","ENSG00000114054",12.0,2.0,1.0,1.0,0.999,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","3:NCK1:136862353:+:3:PCCB:136283837:+:rev","NCK1--PCCB","ENSG00000158092","ENSG00000114054",4.0,1.0,2.0,1.0,0.873,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","3:PCYT1A:196287615:-:3:TCTEX1D2:196296069:-:rev","PCYT1A--TCTEX1D2","ENSG00000161217","ENSG00000213123",15.0,2.0,2.0,2.0,0.997,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","8:C8orf76:123226500:-:8:ATAD2:123323066:-:rev","C8orf76--ATAD2","ENSG00000189376","ENSG00000156802",2.0,1.0,1.0,1.0,0.932,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7Q-01A","8:PABPC1:100721391:-:8:AP001207.3:101461617:-:rev","PABPC1--AP001207.3","ENSG00000070756","ENSG00000254024",1.0,1.0,1.0,1.0,0.895,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","15:ADAM10:58717577:-:15:TERB2:44973867:+:strandcross","ADAM10--TERB2","ENSG00000137845","ENSG00000167014",18.0,1.0,1.0,1.0,0.806505444327359,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","15:ADAM10:58717577:-:15:TERB2:44978489:+:strandcross","ADAM10--TERB2","ENSG00000137845","ENSG00000167014",2.0,1.0,1.0,1.0,0.934,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","15:CHSY1:101235082:-:6:AL033397.1:53564889:-:fusion","CHSY1--AL033397.1","ENSG00000131873","ENSG00000001084",3.0,1.0,1.0,1.0,0.265,0.0145631067961]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","15:CHSY1:101235082:-:6:AL033397.1:53573275:-:fusion","CHSY1--AL033397.1","ENSG00000131873","ENSG00000231683",4.0,1.0,1.0,1.0,0.898,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","17:ACACA:37111531:-:6:AL513188.1:20756768:-:fusion","ACACA--AL513188.1","ENSG00000278540","ENSG00000233848",8.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","1:SWT1:185190642:+:1:DCAF8:160225663:-:strandcross","SWT1--DCAF8","ENSG00000116668","ENSG00000132716",13.0,1.0,1.0,1.0,0.868,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CASC15:21668899:+:6:AL035401.1:23016820:-:strandcross","CASC15--AL035401.1","ENSG00000272168","ENSG00000233358",9.0,1.0,1.0,1.0,0.535,0.00970873786408]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CASC15:21743042:+:6:AL035401.1:23016820:-:strandcross","CASC15--AL035401.1","ENSG00000272168","ENSG00000233358",4.0,1.0,1.0,1.0,0.837,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CASC15:21783708:+:6:AL035401.1:23016820:-:strandcross","CASC15--AL035401.1","ENSG00000272168","ENSG00000233358",11.0,1.0,1.0,1.0,0.929,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CASC15:21802740:+:6:AL035401.1:23016820:-:strandcross","CASC15--AL035401.1","ENSG00000272168","ENSG00000233358",13.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CDKAL1:20548705:+:6:OFCC1:9850469:-:strandcross","CDKAL1--OFCC1","ENSG00000145996","ENSG00000181355",4.0,1.0,1.0,1.0,0.81,0.00485436893204]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CDKAL1:20649377:+:4:AC105384.1:53916219:+:fusion","CDKAL1--AC105384.1","ENSG00000145996","ENSG00000249706",2.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:MCM3:52282045:-:6:ADGRF1:47024217:-:reg","MCM3--ADGRF1","ENSG00000112118","ENSG00000153292",5.0,1.0,1.0,1.0,0.333,0.0145631067961]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","13:ABCC4:95161189:-:13:UGGT2:95801812:-:rev","ABCC4--UGGT2","ENSG00000125257","ENSG00000102595",5.0,1.0,1.0,1.0,0.462,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7R-01A","6:CDKAL1:20548705:+:6:E2F3:20479846:+:rev","CDKAL1--E2F3","ENSG00000145996","ENSG00000112242",1.0,2.0,3.0,2.0,0.984,"NA"]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","12:CD63:55725813:-:12:OS9:57715760:+:strandcross","CD63--OS9","ENSG00000135404","ENSG00000135506",300.0,1.0,1.0,1.0,0.845205330408049,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","12:RAB3IP:69739031:+:12:CD63:55726261:-:strandcross","RAB3IP--CD63","ENSG00000127328","ENSG00000135404",887.0,1.0,2.0,1.0,0.999995178976334,0.0]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","12:RAB3IP:69739031:+:12:OS9:57715760:+:rev","RAB3IP--OS9","ENSG00000127328","ENSG00000135506",16.0,1.0,1.0,1.0,0.696403445953637,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","12:RAB3IP:69739869:+:12:CD63:55726261:-:strandcross","RAB3IP--CD63","ENSG00000127328","ENSG00000135404",19.0,1.0,1.0,1.0,0.839241753406571,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",7.0,44.0,40.0,34.0,0.368,0.0157894736842]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","17:PGAP3:39684597:-:17:MYOCD:12736161:+:strandcross","PGAP3--MYOCD","ENSG00000161395","ENSG00000141052",48.0,1.0,1.0,1.0,0.356729088914917,0.0157894736842]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","17:PGAP3:39684597:-:8:LRRC6:132610261:-:fusion","PGAP3--LRRC6","ENSG00000161395","ENSG00000129295",3.0,1.0,1.0,1.0,0.178,0.0263157894737]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","17:PGAP3:39687834:-:17:MYOCD:12736161:+:strandcross","PGAP3--MYOCD","ENSG00000161395","ENSG00000141052",46.0,1.0,1.0,1.0,0.920063370849329,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","8:AP001207.3:101492450:-:8:RGS22:99965430:-:reg","AP001207.3--RGS22","ENSG00000254024","ENSG00000132554",5.0,1.0,1.0,1.0,0.91,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","8:PABPC1:100704280:-:8:VPS13B:99766774:+:strandcross","PABPC1--VPS13B","ENSG00000070756","ENSG00000132549",8.0,1.0,1.0,1.0,0.717,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","8:PABPC1:100704297:-:8:VPS13B:99766774:+:strandcross","PABPC1--VPS13B","ENSG00000070756","ENSG00000132549",381.0,1.0,1.0,1.0,0.343214797264454,0.0157894736842]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","8:UBR5:102412173:-:8:AP001208.1:101387549:-:reg","UBR5--AP001208.1","ENSG00000104517","ENSG00000253644",33.0,1.0,1.0,1.0,0.587580002537773,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7S-01A","8:UBR5:102412173:-:8:AP001208.1:101390959:-:reg","UBR5--AP001208.1","ENSG00000104517","ENSG00000253644",8.0,1.0,1.0,1.0,0.958,0.0105263157895]
["TCGA_BLCA","TCGA-4Z-AA7W-01A","12:ATF1:50796009:+:12:AC127894.1:69222494:+:reg","ATF1--AC127894.1","ENSG00000123268","ENSG00000258140",19.0,1.0,1.0,1.0,0.744085970403985,0.0]
["TCGA_BLCA","TCGA-4Z-AA80-01A","11:PPFIA1:70272436:+:11:DYNC2H1:103113537:+:reg","PPFIA1--DYNC2H1","ENSG00000131626","ENSG00000187240",11.0,1.0,1.0,1.0,0.586,0.00995024875622]
["TCGA_BLCA","TCGA-4Z-AA80-01A","15:TRPM7:50596255:-:15:EHD4:41901181:-:reg","TRPM7--EHD4","ENSG00000092439","ENSG00000103966",7.0,1.0,1.0,1.0,0.918,0.0]
["TCGA_BLCA","TCGA-4Z-AA80-01A","22:SEC14L4:30503677:-:16:SIAH1:48403667:-:fusion","SEC14L4--SIAH1","ENSG00000133488","ENSG00000196470",15.0,1.0,1.0,1.0,0.545,0.00995024875622]
["TCGA_BLCA","TCGA-4Z-AA80-01A","13:ELF1:40981983:-:13:VWA8:41891587:-:rev","ELF1--VWA8","ENSG00000120690","ENSG00000102763",4.0,1.0,1.0,1.0,0.508,"NA"]
["TCGA_BLCA","TCGA-4Z-AA80-01A","16:NFAT5:69566374:+:16:CYB5B:69447150:+:rev","NFAT5--CYB5B","ENSG00000102908","ENSG00000103018",9.0,10.0,8.0,6.0,0.67,"NA"]
["TCGA_BLCA","TCGA-4Z-AA81-01A","12:STK38L:27244332:+:12:AC084816.1:23167039:+:rev","STK38L--AC084816.1","ENSG00000211455","ENSG00000256995",7.0,1.0,1.0,1.0,0.957,0.0]
["TCGA_BLCA","TCGA-4Z-AA82-01A","12:MED13L:116111428:-:12:TAOK3:118214110:-:rev","MED13L--TAOK3","ENSG00000123066","ENSG00000135090",19.0,1.0,1.0,1.0,0.821755687502108,0.0042735042735]
["TCGA_BLCA","TCGA-4Z-AA82-01A","16:KLHDC4:87748673:-:16:SLC7A5:87837941:-:rev","KLHDC4--SLC7A5","ENSG00000104731","ENSG00000103257",4.0,1.0,1.0,1.0,0.822,"NA"]
["TCGA_BLCA","TCGA-4Z-AA83-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.895,0.0]
["TCGA_BLCA","TCGA-4Z-AA84-01A","10:PFKP:3116846:+:10:CAMK2G:73860889:-:strandcross","PFKP--CAMK2G","ENSG00000067057","ENSG00000148660",4.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-4Z-AA84-01A","17:SRP68:76057403:-:2:XIRP2:167184542:+:fusion","SRP68--XIRP2","ENSG00000167881","ENSG00000163092",2.0,1.0,1.0,1.0,0.911,0.00540540540541]
["TCGA_BLCA","TCGA-4Z-AA84-01A","17:SRP68:76057403:-:2:XIRP2:167210735:+:fusion","SRP68--XIRP2","ENSG00000167881","ENSG00000163092",4.0,1.0,1.0,1.0,0.672,0.0108108108108]
["TCGA_BLCA","TCGA-4Z-AA84-01A","18:ROCK1:21110818:-:4:FABP2:119320842:-:fusion","ROCK1--FABP2","ENSG00000067900","ENSG00000145384",8.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BLCA","TCGA-4Z-AA84-01A","19:AC008770.3:11925273:+:8:TOX:58939544:-:fusion","AC008770.3--TOX","ENSG00000196757","ENSG00000198846",7.0,1.0,1.0,1.0,0.562,0.0108108108108]
["TCGA_BLCA","TCGA-4Z-AA84-01A","1:CEP170:243255040:-:1:UBE2Q1:154555964:-:reg","CEP170--UBE2Q1","ENSG00000143702","ENSG00000160714",10.0,1.0,1.0,1.0,0.723,0.00540540540541]
["TCGA_BLCA","TCGA-4Z-AA84-01A","1:FAF1:50801631:-:1:ITGB3BP:63508570:-:rev","FAF1--ITGB3BP","ENSG00000185104","ENSG00000142856",12.0,1.0,1.0,1.0,0.959,0.0]
["TCGA_BLCA","TCGA-4Z-AA84-01A","22:EP300:41117821:+:19:HAUS8:17056002:-:fusion","EP300--HAUS8","ENSG00000100393","ENSG00000131351",13.0,1.0,1.0,1.0,0.569,0.0108108108108]
["TCGA_BLCA","TCGA-4Z-AA84-01A","6:ITPR3:33663880:+:6:AL662799.1:33437481:-:strandcross","ITPR3--AL662799.1","ENSG00000096433","ENSG00000274259",31.0,1.0,1.0,1.0,0.582939682666089,0.0108108108108]
["TCGA_BLCA","TCGA-4Z-AA84-01A","19:PLPPR2:11361488:+:19:CCDC159:11354580:+:rev","PLPPR2--CCDC159","ENSG00000105520","ENSG00000183401",5.0,1.0,1.0,1.0,0.412,"NA"]
["TCGA_BLCA","TCGA-4Z-AA86-01A","17:PRKCA:66306127:+:17:NF1:31325820:+:rev","PRKCA--NF1","ENSG00000154229","ENSG00000196712",5.0,1.0,1.0,1.0,0.728,0.008356545961]
["TCGA_BLCA","TCGA-4Z-AA86-01A","19:RANBP3:5978061:-:19:ANKRD24:4199683:+:strandcross","RANBP3--ANKRD24","ENSG00000031823","ENSG00000089847",3.0,1.0,1.0,1.0,0.621,0.0111420612813]
["TCGA_BLCA","TCGA-4Z-AA86-01A","19:RANBP3:5978061:-:19:ANKRD24:4199875:+:strandcross","RANBP3--ANKRD24","ENSG00000031823","ENSG00000089847",5.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BLCA","TCGA-4Z-AA87-01A","10:TAF3:7977323:+:21:APP:26022042:-:fusion","TAF3--APP","ENSG00000165632","ENSG00000142192",3.0,1.0,1.0,1.0,0.613,0.00757575757576]
["TCGA_BLCA","TCGA-4Z-AA87-01A","16:LUC7L:220649:-:19:SLC27A5:58501410:-:fusion","LUC7L--SLC27A5","ENSG00000007392","ENSG00000083807",20.0,1.0,1.0,1.0,0.410252588220929,0.0189393939394]
["TCGA_BLCA","TCGA-4Z-AA87-01A","17:MSI2:57262192:+:17:YPEL2:59353215:+:reg","MSI2--YPEL2","ENSG00000153944","ENSG00000175155",7.0,1.0,1.0,1.0,0.934,0.0]
["TCGA_BLCA","TCGA-4Z-AA87-01A","19:CXCL17:42442754:-:19:SYNGR4:48373517:+:strandcross","CXCL17--SYNGR4","ENSG00000189377","ENSG00000105467",4.0,1.0,1.0,1.0,0.658,0.00757575757576]
["TCGA_BLCA","TCGA-4Z-AA87-01A","19:MAP3K10:40205296:+:22:MKL1:40411907:-:fusion","MAP3K10--MKL1","ENSG00000130758","ENSG00000196588",2.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_BLCA","TCGA-4Z-AA87-01A","21:AP000275.2:32603161:-:21:BACE2:41226266:+:strandcross","AP000275.2--BACE2","ENSG00000265590","ENSG00000182240",4.0,1.0,1.0,1.0,0.813,0.00378787878788]
["TCGA_BLCA","TCGA-4Z-AA87-01A","9:RCL1:4833228:+:9:AL162384.1:6066365:+:reg","RCL1--AL162384.1","ENSG00000120158","ENSG00000228739",24.0,1.0,1.0,1.0,0.892183824109133,0.0]
["TCGA_BLCA","TCGA-4Z-AA87-01A","19:CIRBP:1269410:+:19:CNN2:1031071:+:rev","CIRBP--CNN2","ENSG00000099622","ENSG00000064666",4.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","1:ASH1L:155562153:-:1:GON4L:155760641:-:rev","ASH1L--GON4L","ENSG00000116539","ENSG00000116580",3.0,1.0,1.0,1.0,0.863,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","7:PTPN12:77537645:+:7:CCDC146:77273694:+:rev","PTPN12--CCDC146","ENSG00000127947","ENSG00000135205",80.0,1.0,1.0,1.0,0.985548065967154,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","7:PTPN12:77537645:+:7:CCDC146:77274482:+:rev","PTPN12--CCDC146","ENSG00000127947","ENSG00000135205",5.0,1.0,1.0,1.0,0.583,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","7:PTPN12:77538845:+:7:CCDC146:77273694:+:rev","PTPN12--CCDC146","ENSG00000127947","ENSG00000135205",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","8:YWHAZ:100948596:-:8:AP001207.3:101461617:-:rev","YWHAZ--AP001207.3","ENSG00000164924","ENSG00000254024",2.0,1.0,1.0,1.0,0.909,"NA"]
["TCGA_BLCA","TCGA-4Z-AA87-01A","9:MEGF9:120713758:-:9:PSMD5:120820979:-:rev","MEGF9--PSMD5","ENSG00000106780","ENSG00000095261",7.0,1.0,1.0,1.0,0.586,"NA"]
["TCGA_BLCA","TCGA-4Z-AA89-01A","8:MCPH1:6409370:+:8:AC090204.1:33041635:+:reg","MCPH1--AC090204.1","ENSG00000147316","ENSG00000247134",8.0,1.0,1.0,1.0,0.251,0.0254237288136]
["TCGA_BLCA","TCGA-4Z-AA89-01A","9:FOCAD:20823115:+:9:AC017067.1:22767175:+:reg","FOCAD--AC017067.1","ENSG00000188352","ENSG00000224549",2.0,1.0,1.0,1.0,0.909,0.0]
["TCGA_BLCA","TCGA-5N-A9KI-01A","1:PTP4A2:31937987:-:20:ARFGEF2:49028530:+:fusion","PTP4A2--ARFGEF2","ENSG00000184007","ENSG00000124198",12.0,1.0,1.0,1.0,0.965,0.00358422939068]
["TCGA_BLCA","TCGA-5N-A9KI-01A","5:MTMR12:32248002:-:5:ZFR:32355939:-:rev","MTMR12--ZFR","ENSG00000150712","ENSG00000056097",1.0,1.0,1.0,1.0,0.962,"NA"]
["TCGA_BLCA","TCGA-5N-A9KM-01A","15:MYO1E:59372498:-:15:FOXB1:60025756:+:strandcross","MYO1E--FOXB1","ENSG00000157483","ENSG00000171956",23.0,1.0,1.0,1.0,0.871693308449991,0.0]
["TCGA_BLCA","TCGA-BL-A0C8-01A","12:DIP2B:50714596:+:12:SPATS2:49525944:+:rev","DIP2B--SPATS2","ENSG00000066084","ENSG00000123352",26.0,3.0,2.0,2.0,0.885982551016511,0.00757575757576]
["TCGA_BLCA","TCGA-BL-A0C8-01A","12:DIP2B:50714596:+:12:SPATS2:49526078:+:rev","DIP2B--SPATS2","ENSG00000066084","ENSG00000123352",3.0,1.0,1.0,1.0,0.971,0.0]
["TCGA_BLCA","TCGA-BL-A0C8-01A","17:MRPS23:57849240:-:17:TRIM37:58999459:-:rev","MRPS23--TRIM37","ENSG00000181610","ENSG00000108395",11.0,2.0,1.0,1.0,0.975,0.0]
["TCGA_BLCA","TCGA-BL-A0C8-01A","17:SPAG9:51047375:-:6:PCMT1:149771162:+:fusion","SPAG9--PCMT1","ENSG00000008294","ENSG00000120265",8.0,3.0,2.0,2.0,0.98,0.0]
["TCGA_BLCA","TCGA-BL-A0C8-01A","17:SPAG9:51079584:-:6:PCMT1:149771162:+:fusion","SPAG9--PCMT1","ENSG00000008294","ENSG00000120265",4.0,1.0,1.0,1.0,0.981,0.0]
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["TCGA_BLCA","TCGA-BL-A0C8-01A","3:VGLL4:11693045:-:3:LIMD1:45665650:+:strandcross","VGLL4--LIMD1","ENSG00000144560","ENSG00000144791",4.0,1.0,1.0,1.0,0.536,0.0227272727273]
["TCGA_BLCA","TCGA-BL-A0C8-01A","3:VGLL4:11702971:-:3:LIMD1:45665650:+:strandcross","VGLL4--LIMD1","ENSG00000144560","ENSG00000144791",757.0,3.0,2.0,2.0,0.999995265824157,0.0]
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["TCGA_BLCA","TCGA-BL-A0C8-01A","15:AC018574.1:96046789:-:15:AC024337.1:96049695:-:rev","AC018574.1--AC024337.1","ENSG00000259348","ENSG00000259702",4.0,1.0,2.0,1.0,0.454,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","1:PCP4L1:161258983:+:1:NDUFS2:161213380:+:rev","PCP4L1--NDUFS2","ENSG00000248485","ENSG00000158864",17.0,3.0,1.0,1.0,0.828376233713694,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","4:AC139718.1:111809571:-:4:AC004704.1:111829050:-:rev","AC139718.1--AC004704.1","ENSG00000248432","ENSG00000249815",3.0,2.0,1.0,1.0,0.9,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","5:CANX:179704430:+:5:ZNF354B:178860997:+:rev","CANX--ZNF354B","ENSG00000127022","ENSG00000178338",5.0,3.0,1.0,1.0,0.532,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","6:ZFAND3:37929999:+:6:AL353597.1:37534276:+:rev","ZFAND3--AL353597.1","ENSG00000156639","ENSG00000204110",8.0,3.0,3.0,3.0,0.674,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","7:AC005532.1:7259596:+:7:C1GALT1:7234303:+:rev","AC005532.1--C1GALT1","ENSG00000230825","ENSG00000106392",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-BL-A0C8-01A","9:WNK2:93185610:+:9:CENPP:92611314:+:rev","WNK2--CENPP","ENSG00000165238","ENSG00000188312",2.0,1.0,1.0,1.0,0.587,"NA"]
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["TCGA_BLCA","TCGA-BL-A0C8-01B","12:DIP2B:50714596:+:12:SPATS2:49525944:+:rev","DIP2B--SPATS2","ENSG00000066084","ENSG00000123352",9.0,3.0,2.0,2.0,0.603,0.0268456375839]
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["TCGA_BLCA","TCGA-BL-A0C8-01B","3:VGLL4:11702971:-:3:LIMD1:45665650:+:strandcross","VGLL4--LIMD1","ENSG00000144560","ENSG00000144791",230.0,3.0,2.0,2.0,0.997300801522616,0.0]
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["TCGA_BLCA","TCGA-BL-A0C8-01B","8:GRHL2:101649499:+:2:FAM49A:16588129:-:fusion","GRHL2--FAM49A","ENSG00000083307","ENSG00000197872",4.0,2.0,2.0,2.0,0.825,0.0]
["TCGA_BLCA","TCGA-BL-A0C8-01B","9:SNX30:112838697:+:6:PXT1:36426091:-:fusion","SNX30--PXT1","ENSG00000148158","ENSG00000179165",8.0,3.0,2.0,2.0,0.711,0.0134228187919]
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["TCGA_BLCA","TCGA-BL-A0C8-01B","6:ZFAND3:37929999:+:6:AL353597.1:37534276:+:rev","ZFAND3--AL353597.1","ENSG00000156639","ENSG00000204110",3.0,3.0,3.0,3.0,0.627,"NA"]
["TCGA_BLCA","TCGA-BL-A13J-01A","13:PSPC1:19741565:-:13:MPHOSPH8:19658995:+:strandcross","PSPC1--MPHOSPH8","ENSG00000121390","ENSG00000196199",4.0,1.0,1.0,1.0,0.599,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01A","15:AC104041.1:81797924:-:9:NAA35:85974967:+:fusion","AC104041.1--NAA35","ENSG00000259692","ENSG00000135040",3.0,1.0,1.0,1.0,0.165,0.0635593220339]
["TCGA_BLCA","TCGA-BL-A13J-01A","15:ARIH1:72475014:+:13:LINC00598:40097967:-:fusion","ARIH1--LINC00598","ENSG00000166233","ENSG00000215483",8.0,3.0,1.0,1.0,0.519,0.0135135135135]
["TCGA_BLCA","TCGA-BL-A13J-01A","15:ARIH1:72475014:+:13:LINC00598:40217750:-:fusion","ARIH1--LINC00598","ENSG00000166233","ENSG00000215483",2.0,2.0,1.0,1.0,0.918,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01A","15:PCSK6:101384322:-:22:AL022329.1:25561498:-:fusion","PCSK6--AL022329.1","ENSG00000140479","ENSG00000234884",4.0,1.0,1.0,1.0,0.834,0.00423728813559]
["TCGA_BLCA","TCGA-BL-A13J-01A","1:FAM102B:108600686:+:1:SLC25A24:108185954:-:strandcross","FAM102B--SLC25A24","ENSG00000162636","ENSG00000085491",1.0,2.0,2.0,2.0,0.809,0.00423728813559]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:AC092042.3:42809532:+:3:POMGNT2:43081536:-:strandcross","AC092042.3--POMGNT2","ENSG00000144648","ENSG00000144647",8.0,2.0,1.0,1.0,0.567,0.00675675675676]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:AC092042.3:42819711:+:3:POMGNT2:43081536:-:strandcross","AC092042.3--POMGNT2","ENSG00000144648","ENSG00000144647",7.0,3.0,2.0,2.0,0.781,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:ACKR2:42839279:+:3:POMGNT2:43081536:-:strandcross","ACKR2--POMGNT2","ENSG00000144648","ENSG00000144647",3.0,2.0,2.0,1.0,0.668,0.00675675675676]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:KRBOX1:42809532:+:3:POMGNT2:43081536:-:strandcross","KRBOX1--POMGNT2","ENSG00000144648","ENSG00000144647",8.0,2.0,1.0,1.0,0.567,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:KRBOX1:42819711:+:3:POMGNT2:43081536:-:strandcross","KRBOX1--POMGNT2","ENSG00000144648","ENSG00000144647",7.0,3.0,2.0,2.0,0.781,0.0]
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["TCGA_BLCA","TCGA-BL-A13J-01A","13:B3GLCT:31261082:+:13:TEX26:30974846:+:rev","B3GLCT--TEX26","ENSG00000187676","ENSG00000175664",10.0,3.0,2.0,2.0,0.966,"NA"]
["TCGA_BLCA","TCGA-BL-A13J-01A","2:USP34:61259711:-:2:FAM161A:61827258:-:rev","USP34--FAM161A","ENSG00000115464","ENSG00000170264",5.0,3.0,2.0,2.0,0.958,"NA"]
["TCGA_BLCA","TCGA-BL-A13J-01A","3:TSEN2:12503784:+:3:PPARG:12392614:+:rev","TSEN2--PPARG","ENSG00000154743","ENSG00000132170",2.0,1.0,2.0,1.0,0.643,"NA"]
["TCGA_BLCA","TCGA-BL-A13J-01B","1:FAM102B:108600686:+:1:SLC25A24:108185954:-:strandcross","FAM102B--SLC25A24","ENSG00000162636","ENSG00000085491",5.0,2.0,2.0,2.0,0.232,0.0584795321637]
["TCGA_BLCA","TCGA-BL-A13J-01B","2:HDAC4:239236593:-:2:SATB2:199460532:-:reg","HDAC4--SATB2","ENSG00000068024","ENSG00000119042",3.0,1.0,2.0,1.0,0.983,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01B","3:AC092042.3:42819711:+:3:POMGNT2:43081536:-:strandcross","AC092042.3--POMGNT2","ENSG00000144648","ENSG00000144647",3.0,3.0,2.0,2.0,0.435,0.0350877192982]
["TCGA_BLCA","TCGA-BL-A13J-01B","3:KRBOX1:42819711:+:3:POMGNT2:43081536:-:strandcross","KRBOX1--POMGNT2","ENSG00000144648","ENSG00000144647",3.0,3.0,2.0,2.0,0.435,0.0]
["TCGA_BLCA","TCGA-BL-A13J-01B","13:B3GLCT:31261082:+:13:TEX26:30974846:+:rev","B3GLCT--TEX26","ENSG00000187676","ENSG00000175664",2.0,3.0,2.0,2.0,0.777,"NA"]
["TCGA_BLCA","TCGA-BL-A13J-01B","2:USP34:61259711:-:2:FAM161A:61827258:-:rev","USP34--FAM161A","ENSG00000115464","ENSG00000170264",10.0,3.0,2.0,2.0,0.926,"NA"]
["TCGA_BLCA","TCGA-BL-A3JM-01A","13:UBL3:29849512:-:13:CKAP2:52456523:+:strandcross","UBL3--CKAP2","ENSG00000122042","ENSG00000136108",115.0,1.0,1.0,1.0,0.962726132253274,0.0]
["TCGA_BLCA","TCGA-BL-A3JM-01A","3:SMARCC1:47772817:-:3:DOCK3:50890026:+:strandcross","SMARCC1--DOCK3","ENSG00000173473","ENSG00000088538",19.0,1.0,1.0,1.0,0.426260447958983,0.0220994475138]
["TCGA_BLCA","TCGA-BL-A3JM-01A","12:ZCCHC8:122498827:-:12:RSRC2:122505706:-:rev","ZCCHC8--RSRC2","ENSG00000033030","ENSG00000111011",117.0,10.0,9.0,9.0,0.915336643424712,"NA"]
["TCGA_BLCA","TCGA-BT-A0S7-01A","11:AMOTL1:94795160:+:11:SLCO2B1:75162655:+:rev","AMOTL1--SLCO2B1","ENSG00000166025","ENSG00000137491",5.0,1.0,1.0,1.0,0.461,0.0175438596491]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:NUP107:68735344:+:12:CPM:68885889:-:strandcross","NUP107--CPM","ENSG00000111581","ENSG00000135678",2.0,2.0,1.0,1.0,0.684,0.0175438596491]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:RAB3IP:69756663:+:12:NUP107:68731607:+:rev","RAB3IP--NUP107","ENSG00000127328","ENSG00000111581",192.0,1.0,1.0,1.0,0.880955839042064,0.00877192982456]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:RAB3IP:69756663:+:12:NUP107:68732637:+:rev","RAB3IP--NUP107","ENSG00000127328","ENSG00000111581",14.0,1.0,1.0,1.0,0.861,0.0175438596491]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:RAB3IP:69756663:+:12:NUP107:68733452:+:rev","RAB3IP--NUP107","ENSG00000127328","ENSG00000111581",4.0,1.0,1.0,1.0,0.828,0.0175438596491]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:YEATS4:69362907:+:12:LYZ:69350108:+:rev","YEATS4--LYZ","ENSG00000127337","ENSG00000090382",4.0,2.0,2.0,1.0,0.657,"NA"]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:YEATS4:69365884:+:12:LYZ:69350108:+:rev","YEATS4--LYZ","ENSG00000127337","ENSG00000090382",39.0,1.0,1.0,1.0,0.840608993781047,"NA"]
["TCGA_BLCA","TCGA-BT-A0S7-01A","12:YEATS4:69370975:+:12:LYZ:69350108:+:rev","YEATS4--LYZ","ENSG00000127337","ENSG00000090382",7.0,5.0,4.0,3.0,0.994,"NA"]
["TCGA_BLCA","TCGA-BT-A0S7-01A","22:EP300:41093098:+:22:MCHR1:40680949:+:rev","EP300--MCHR1","ENSG00000100393","ENSG00000128285",21.0,1.0,1.0,1.0,0.917973851746296,"NA"]
["TCGA_BLCA","TCGA-BT-A0YX-01A","5:C5orf66:135174172:+:17:JUP:41758870:-:fusion","C5orf66--JUP","ENSG00000224186","ENSG00000173801",102.0,1.0,1.0,1.0,0.989119072598748,0.00873362445415]
["TCGA_BLCA","TCGA-BT-A0YX-01A","5:PCBD2:134905223:+:17:JUP:41758870:-:fusion","PCBD2--JUP","ENSG00000132570","ENSG00000173801",9.0,1.0,1.0,1.0,0.963,0.00873362445415]
["TCGA_BLCA","TCGA-BT-A0YX-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",5.0,23.0,20.0,15.0,0.531,"NA"]
["TCGA_BLCA","TCGA-BT-A20J-01A","13:TBC1D4:75309942:-:2:TRAPPC12:3443779:+:fusion","TBC1D4--TRAPPC12","ENSG00000136111","ENSG00000171853",4.0,1.0,1.0,1.0,0.209,0.0424528301887]
["TCGA_BLCA","TCGA-BT-A20J-01A","7:COBL:51190850:-:7:FKBP9:33002676:+:strandcross","COBL--FKBP9","ENSG00000106078","ENSG00000122642",2.0,1.0,1.0,1.0,0.191,0.0518867924528]
["TCGA_BLCA","TCGA-BT-A20J-01A","7:KBTBD2:32891536:-:7:COBL:51219944:-:rev","KBTBD2--COBL","ENSG00000170852","ENSG00000106078",7.0,1.0,1.0,1.0,0.819,0.00943396226415]
["TCGA_BLCA","TCGA-BT-A20J-01A","7:PHTF2:77910409:+:7:BET1:93999294:-:strandcross","PHTF2--BET1","ENSG00000006576","ENSG00000105829",8.0,1.0,1.0,1.0,0.344,0.0283018867925]
["TCGA_BLCA","TCGA-BT-A20N-01A","11:PPP6R3:68558679:+:11:YAP1:102227469:+:reg","PPP6R3--YAP1","ENSG00000110075","ENSG00000137693",11.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BLCA","TCGA-BT-A20N-01A","17:ZNF652:49311312:-:4:MRPL1:77906946:+:fusion","ZNF652--MRPL1","ENSG00000198740","ENSG00000169288",4.0,1.0,1.0,1.0,0.668,0.0126582278481]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:CTNNB1:41238076:+:7:SEM1:96645932:-:fusion","CTNNB1--SEM1","ENSG00000168036","ENSG00000127922",2.0,1.0,1.0,1.0,0.539,0.0189873417722]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:CTNNB1:41239354:+:7:SEM1:96622643:-:fusion","CTNNB1--SEM1","ENSG00000168036","ENSG00000127922",6.0,1.0,1.0,1.0,0.874,0.00632911392405]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:CTNNB1:41239354:+:7:SEM1:96645932:-:fusion","CTNNB1--SEM1","ENSG00000168036","ENSG00000127922",8.0,1.0,1.0,1.0,0.316,0.0189873417722]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:CTNNB1:41239354:+:7:SEM1:96645936:-:fusion","CTNNB1--SEM1","ENSG00000168036","ENSG00000127922",7.0,1.0,1.0,1.0,0.612,0.0126582278481]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:CTNNB1:41239354:+:7:SEM1:96650519:-:fusion","CTNNB1--SEM1","ENSG00000168036","ENSG00000127922",2.0,1.0,1.0,1.0,0.291,0.0189873417722]
["TCGA_BLCA","TCGA-BT-A20N-01A","3:OGG1:9751192:+:3:LPP-AS1:188562439:-:strandcross","OGG1--LPP-AS1","ENSG00000114026","ENSG00000224563",4.0,1.0,1.0,1.0,0.339,0.0189873417722]
["TCGA_BLCA","TCGA-BT-A20N-01A","5:DAP:10748175:-:5:LINC02241:20934932:+:strandcross","DAP--LINC02241","ENSG00000112977","ENSG00000251629",2.0,1.0,1.0,1.0,0.879,0.00632911392405]
["TCGA_BLCA","TCGA-BT-A20N-01A","1:RERE:8365812:-:1:ENO1:8871986:-:rev","RERE--ENO1","ENSG00000142599","ENSG00000074800",1.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_BLCA","TCGA-BT-A20P-01A","9:MLLT3:20620654:-:9:FOCAD:20862578:+:strandcross","MLLT3--FOCAD","ENSG00000171843","ENSG00000188352",3.0,2.0,1.0,1.0,0.891,0.0]
["TCGA_BLCA","TCGA-BT-A20Q-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.891,0.00341296928328]
["TCGA_BLCA","TCGA-BT-A20Q-01A","17:EPN2:19237531:+:17:KCNJ18:21695983:+:reg","EPN2--KCNJ18","ENSG00000072134","ENSG00000260458",72.0,1.0,1.0,1.0,0.978149499494197,0.00341296928328]
["TCGA_BLCA","TCGA-BT-A20Q-01A","X:KDM6A:45085979:+:X:ANOS1:8623670:-:strandcross","KDM6A--ANOS1","ENSG00000147050","ENSG00000011201",7.0,1.0,1.0,1.0,0.462,0.0170648464164]
["TCGA_BLCA","TCGA-BT-A20R-01A","18:NEDD4L:58252054:+:1:HYI:43452319:-:fusion","NEDD4L--HYI","ENSG00000049759","ENSG00000178922",6.0,1.0,1.0,1.0,0.386,0.0146341463415]
["TCGA_BLCA","TCGA-BT-A20R-01A","22:EP300:41137790:+:22:RBX1:40972476:+:rev","EP300--RBX1","ENSG00000100393","ENSG00000100387",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BLCA","TCGA-BT-A20T-01A","12:PLBD1:14535659:-:12:CREBL2:12635777:+:strandcross","PLBD1--CREBL2","ENSG00000121316","ENSG00000111269",5.0,1.0,1.0,1.0,0.594,0.0216216216216]
["TCGA_BLCA","TCGA-BT-A20T-01A","1:GATAD2B:153922733:-:1:ERI3:44319744:-:reg","GATAD2B--ERI3","ENSG00000143614","ENSG00000117419",2.0,1.0,1.0,1.0,0.623,0.0216216216216]
["TCGA_BLCA","TCGA-BT-A20V-01A","16:VAC14:70698637:-:16:WWOX:79211608:+:strandcross","VAC14--WWOX","ENSG00000103043","ENSG00000186153",6.0,1.0,1.0,1.0,0.498,0.0168539325843]
["TCGA_BLCA","TCGA-BT-A20V-01A","16:VAC14:70731495:-:16:WWOX:79211608:+:strandcross","VAC14--WWOX","ENSG00000103043","ENSG00000186153",29.0,1.0,1.0,1.0,0.915263938161793,0.00561797752809]
["TCGA_BLCA","TCGA-BT-A20V-01A","1:UBE4B:10105744:+:19:ZNF536:30710757:+:fusion","UBE4B--ZNF536","ENSG00000130939","ENSG00000198597",8.0,1.0,1.0,1.0,0.343,0.0224719101124]
["TCGA_BLCA","TCGA-BT-A20V-01A","20:ITCH:34393881:+:20:AHCY:34295585:-:strandcross","ITCH--AHCY","ENSG00000078747","ENSG00000101444",22.0,1.0,1.0,1.0,0.56823194485407,0.0]
["TCGA_BLCA","TCGA-BT-A20V-01A","5:ICE1:5476079:+:5:AC026790.1:17162565:-:strandcross","ICE1--AC026790.1","ENSG00000164151","ENSG00000215196",5.0,1.0,1.0,1.0,0.301,0.0224719101124]
["TCGA_BLCA","TCGA-BT-A20V-01A","16:FANCA:89782859:-:16:AC092143.2:89920725:-:rev","FANCA--AC092143.2","ENSG00000187741","ENSG00000259006",2.0,1.0,1.0,1.0,0.68,"NA"]
["TCGA_BLCA","TCGA-BT-A20W-01A","12:ADIPOR2:1691191:+:12:DCP1B:1967910:-:strandcross","ADIPOR2--DCP1B","ENSG00000006831","ENSG00000151065",10.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","12:ADIPOR2:1691213:+:12:DCP1B:1967910:-:strandcross","ADIPOR2--DCP1B","ENSG00000006831","ENSG00000151065",22.0,3.0,1.0,1.0,0.826545884250108,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","12:ADIPOR2:1702982:+:12:DCP1B:1967910:-:strandcross","ADIPOR2--DCP1B","ENSG00000006831","ENSG00000151065",11.0,1.0,1.0,1.0,0.31,0.0479452054795]
["TCGA_BLCA","TCGA-BT-A20W-01A","15:TRPM7:50686531:-:15:SRP14:40038948:-:reg","TRPM7--SRP14","ENSG00000092439","ENSG00000140319",18.0,1.0,1.0,1.0,0.843420011429488,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","1:ANXA9:150986661:+:1:MRPL9:151760031:-:strandcross","ANXA9--MRPL9","ENSG00000143412","ENSG00000143436",13.0,2.0,2.0,2.0,0.37,0.041095890411]
["TCGA_BLCA","TCGA-BT-A20W-01A","1:ANXA9:150986661:+:1:MRPL9:151760181:-:strandcross","ANXA9--MRPL9","ENSG00000143412","ENSG00000143436",29.0,2.0,2.0,2.0,0.756487760449244,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","1:ARID1A:26732792:+:9:HNRNPK:83969380:-:fusion","ARID1A--HNRNPK","ENSG00000117713","ENSG00000165119",3.0,1.0,1.0,1.0,0.234,0.0547945205479]
["TCGA_BLCA","TCGA-BT-A20W-01A","1:ARID1A:26732792:+:9:HNRNPK:83969440:-:fusion","ARID1A--HNRNPK","ENSG00000117713","ENSG00000165119",1.0,1.0,1.0,1.0,0.911,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","5:CCT5:10254205:+:5:LINC02063:4143247:+:rev","CCT5--LINC02063","ENSG00000150753","ENSG00000250921",2.0,1.0,1.0,1.0,0.749,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","5:DAP:10748175:-:5:CCT5:10255955:+:strandcross","DAP--CCT5","ENSG00000112977","ENSG00000150753",8.0,1.0,1.0,1.0,0.685,0.013698630137]
["TCGA_BLCA","TCGA-BT-A20W-01A","8:ANKRD46:100522606:-:8:ODF1:102560452:+:strandcross","ANKRD46--ODF1","ENSG00000186106","ENSG00000155087",4.0,1.0,1.0,1.0,0.827,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","11:MACROD1:64151239:-:11:NRXN2:64608082:-:rev","MACROD1--NRXN2","ENSG00000133315","ENSG00000110076",2.0,1.0,1.0,1.0,0.943,"NA"]
["TCGA_BLCA","TCGA-BT-A20W-01A","2:KIF5C:148983766:+:2:EPC2:148690214:+:rev","KIF5C--EPC2","ENSG00000168280","ENSG00000135999",4.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BLCA","TCGA-BT-A20W-01A","3:SMARCC1:47706409:-:3:SHISA5:48469843:-:rev","SMARCC1--SHISA5","ENSG00000173473","ENSG00000164054",21.0,1.0,1.0,1.0,0.81457951647484,"NA"]
["TCGA_BLCA","TCGA-BT-A20X-01A","12:MARCH9:57757084:+:12:KCNC2:75051317:-:strandcross","MARCH9--KCNC2","ENSG00000139266","ENSG00000166006",2.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-BT-A2LA-01A","10:FAM13C:59251575:-:10:ZNF365:62623103:+:strandcross","FAM13C--ZNF365","ENSG00000148541","ENSG00000138311",6.0,1.0,1.0,1.0,0.346,0.0280112044818]
["TCGA_BLCA","TCGA-BT-A2LA-01A","13:STK24:98576745:-:13:TMTC4:100606427:-:rev","STK24--TMTC4","ENSG00000102572","ENSG00000125247",13.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-BT-A2LA-01A","18:FECH:57580073:-:1:NCMAP:24595424:+:fusion","FECH--NCMAP","ENSG00000066926","ENSG00000184454",6.0,1.0,1.0,1.0,0.662,0.0112044817927]
["TCGA_BLCA","TCGA-BT-A2LA-01A","20:XRN2:21368590:+:20:KIZ:21229011:+:rev","XRN2--KIZ","ENSG00000088930","ENSG00000088970",2.0,1.0,2.0,1.0,0.769,"NA"]
["TCGA_BLCA","TCGA-BT-A2LB-01A","16:MARF1:15630332:-:16:IQCK:19856487:+:strandcross","MARF1--IQCK","ENSG00000166783","ENSG00000174628",76.0,1.0,1.0,1.0,0.644122606986611,0.008]
["TCGA_BLCA","TCGA-BT-A2LB-01A","16:MARF1:15631381:-:16:IQCK:19856487:+:strandcross","MARF1--IQCK","ENSG00000166783","ENSG00000174628",14.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-BT-A2LD-01A","20:RBM39:35741941:-:4:PRDM5:120821345:-:fusion","RBM39--PRDM5","ENSG00000131051","ENSG00000138738",5.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-BT-A2LD-01A","4:ABCG2:88139793:-:4:AC092674.1:77399794:-:reg","ABCG2--AC092674.1","ENSG00000118777","ENSG00000249036",9.0,1.0,1.0,1.0,0.846,0.00966183574879]
["TCGA_BLCA","TCGA-BT-A2LD-01A","8:COX6C:99891908:-:19:TDRD12:32790531:+:fusion","COX6C--TDRD12","ENSG00000164919","ENSG00000173809",5.0,1.0,1.0,1.0,0.891,0.00966183574879]
["TCGA_BLCA","TCGA-BT-A2LD-01A","X:HS6ST2:132956808:-:4:NPFFR2:72138040:+:fusion","HS6ST2--NPFFR2","ENSG00000171004","ENSG00000056291",2.0,1.0,1.0,1.0,0.893,0.00966183574879]
["TCGA_BLCA","TCGA-BT-A3PH-01A","22:UBE2L3:21567771:+:22:YPEL1:21710908:-:strandcross","UBE2L3--YPEL1","ENSG00000185651","ENSG00000100027",22.0,1.0,1.0,1.0,0.881340540848198,0.0]
["TCGA_BLCA","TCGA-BT-A3PH-01A","19:WDR62:36084744:+:19:HCST:35903351:+:rev","WDR62--HCST","ENSG00000075702","ENSG00000126264",17.0,1.0,1.0,1.0,0.851036409523421,"NA"]
["TCGA_BLCA","TCGA-BT-A3PJ-01A","12:KRT5:52517590:-:X:SAT1:23785328:+:fusion","KRT5--SAT1","ENSG00000186081","ENSG00000130066",2.0,1.0,1.0,1.0,0.608,0.00486223662885]
["TCGA_BLCA","TCGA-BT-A3PJ-01A","14:RCOR1:102714617:+:14:TECPR2:102496979:+:rev","RCOR1--TECPR2","ENSG00000089902","ENSG00000196663",4.0,1.0,1.0,1.0,0.472,"NA"]
["TCGA_BLCA","TCGA-BT-A3PJ-01A","15:MYO9A:72117680:-:15:CELF6:72290255:-:rev","MYO9A--CELF6","ENSG00000066933","ENSG00000273025",5.0,1.0,1.0,1.0,0.633,"NA"]
["TCGA_BLCA","TCGA-BT-A3PJ-01A","17:ZZEF1:4142542:-:17:ANKFY1:4208082:-:rev","ZZEF1--ANKFY1","ENSG00000074755","ENSG00000185722",2.0,1.0,1.0,1.0,0.802,"NA"]
["TCGA_BLCA","TCGA-BT-A3PK-01A","10:ANK3:60615186:-:12:AC025419.1:65570048:-:fusion","ANK3--AC025419.1","ENSG00000151150","ENSG00000250748",2.0,1.0,1.0,1.0,0.761,0.0042735042735]
["TCGA_BLCA","TCGA-BT-A3PK-01A","18:ROCK1:21023620:-:1:GUCA2B:42154680:+:fusion","ROCK1--GUCA2B","ENSG00000067900","ENSG00000044012",6.0,1.0,1.0,1.0,0.963,0.0]
["TCGA_BLCA","TCGA-BT-A3PK-01A","8:EXT1:118110085:-:13:FAM155A:107170786:-:fusion","EXT1--FAM155A","ENSG00000182197","ENSG00000204442",4.0,1.0,1.0,1.0,0.711,0.0042735042735]
["TCGA_BLCA","TCGA-BT-A42C-01A","11:FCHSD2:72902543:-:11:AP001107.5:66416793:+:strandcross","FCHSD2--AP001107.5","ENSG00000137478","ENSG00000254510",8.0,1.0,1.0,1.0,0.497,0.00849858356941]
["TCGA_BLCA","TCGA-BT-A42C-01A","11:FCHSD2:73140031:-:11:PPFIA1:70348189:+:strandcross","FCHSD2--PPFIA1","ENSG00000137478","ENSG00000131626",6.0,1.0,1.0,1.0,0.903,0.0056657223796]
["TCGA_BLCA","TCGA-BT-A42C-01A","12:MDM1:68302620:-:12:FRS2:69486202:+:strandcross","MDM1--FRS2","ENSG00000111554","ENSG00000166225",8.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_BLCA","TCGA-BT-A42C-01A","12:SRGAP1:63844883:+:12:KCNMB4:70400209:+:reg","SRGAP1--KCNMB4","ENSG00000196935","ENSG00000135643",168.0,1.0,1.0,1.0,0.995560483164492,0.0]
["TCGA_BLCA","TCGA-BT-A42C-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",5.0,44.0,40.0,34.0,0.902,0.0056657223796]
["TCGA_BLCA","TCGA-BT-A42E-01A","20:DHX35:38983776:+:3:AC026167.1:6358901:+:fusion","DHX35--AC026167.1","ENSG00000101452","ENSG00000226022",14.0,1.0,1.0,1.0,0.269,0.0145454545455]
["TCGA_BLCA","TCGA-BT-A42F-01A","15:GNB5:52147459:-:15:BNIP2:59664120:-:rev","GNB5--BNIP2","ENSG00000069966","ENSG00000140299",3.0,1.0,1.0,1.0,0.723,0.00176366843034]
["TCGA_BLCA","TCGA-BT-A42F-01A","6:FOXO3:108561829:+:6:AL359313.1:142528383:-:strandcross","FOXO3--AL359313.1","ENSG00000118689","ENSG00000236366",3.0,1.0,1.0,1.0,0.312,0.0123456790123]
["TCGA_BLCA","TCGA-BT-A42F-01A","15:PEAK1:77283883:-:15:CIB2:78123739:-:rev","PEAK1--CIB2","ENSG00000173517","ENSG00000136425",3.0,1.0,1.0,1.0,0.439,"NA"]
["TCGA_BLCA","TCGA-C4-A0EZ-01A","22:MIAT:26646959:+:22:SEZ6L:26340436:+:rev","MIAT--SEZ6L","ENSG00000225783","ENSG00000100095",7.0,1.0,1.0,1.0,0.978,"NA"]
["TCGA_BLCA","TCGA-C4-A0F0-01A","11:DYNC2H1:103121496:+:11:C11orf70:102075873:+:rev","DYNC2H1--C11orf70","ENSG00000187240","ENSG00000137691",2.0,1.0,1.0,1.0,0.81,0.0062893081761]
["TCGA_BLCA","TCGA-C4-A0F0-01A","11:DYNC2H1:103125295:+:11:C11orf70:102058880:+:rev","DYNC2H1--C11orf70","ENSG00000187240","ENSG00000137691",3.0,1.0,1.0,1.0,0.226,0.0314465408805]
["TCGA_BLCA","TCGA-C4-A0F0-01A","11:DYNC2H1:103129005:+:11:C11orf70:102047815:+:rev","DYNC2H1--C11orf70","ENSG00000187240","ENSG00000137691",18.0,1.0,1.0,1.0,0.814472594422351,0.0062893081761]
["TCGA_BLCA","TCGA-C4-A0F0-01A","11:DYNC2H1:103129005:+:11:C11orf70:102058880:+:rev","DYNC2H1--C11orf70","ENSG00000187240","ENSG00000137691",9.0,1.0,1.0,1.0,0.618,0.0062893081761]
["TCGA_BLCA","TCGA-C4-A0F0-01A","10:PTEN:87894109:+:10:MINPP1:87552082:+:rev","PTEN--MINPP1","ENSG00000171862","ENSG00000107789",2.0,2.0,2.0,1.0,0.861,"NA"]
["TCGA_BLCA","TCGA-C4-A0F0-01A","11:TMEM123:102401539:-:11:MMP20:102579142:-:rev","TMEM123--MMP20","ENSG00000152558","ENSG00000137674",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_BLCA","TCGA-C4-A0F1-01A","8:AC090809.1:36701821:-:8:TPD52:80064593:-:rev","AC090809.1--TPD52","ENSG00000253363","ENSG00000276418",7.0,1.0,1.0,1.0,0.263,0.0232018561485]
["TCGA_BLCA","TCGA-C4-A0F6-01A","X:TBC1D8B:106802983:+:X:RNF128:106795580:+:rev","TBC1D8B--RNF128","ENSG00000133138","ENSG00000133135",3.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_BLCA","TCGA-C4-A0F7-01A","14:BCL11B:99257471:-:14:MIPOL1:37212230:+:strandcross","BCL11B--MIPOL1","ENSG00000127152","ENSG00000151338",10.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BLCA","TCGA-C4-A0F7-01A","14:BCL11B:99257471:-:14:MIPOL1:37219553:+:strandcross","BCL11B--MIPOL1","ENSG00000127152","ENSG00000151338",92.0,1.0,1.0,1.0,0.328360246681984,0.0176470588235]
["TCGA_BLCA","TCGA-C4-A0F7-01A","14:CEP128:80761437:-:14:TSHR:81096639:+:strandcross","CEP128--TSHR","ENSG00000100629","ENSG00000165409",2.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_BLCA","TCGA-C4-A0F7-01A","15:RFX7:56179270:-:15:LIPC:58538333:+:strandcross","RFX7--LIPC","ENSG00000181827","ENSG00000166035",22.0,1.0,1.0,1.0,0.28869946299377,0.0205882352941]
["TCGA_BLCA","TCGA-C4-A0F7-01A","15:RFX7:56179270:-:15:LIPC:58541785:+:strandcross","RFX7--LIPC","ENSG00000181827","ENSG00000166035",2.0,1.0,1.0,1.0,0.508,0.00882352941176]
["TCGA_BLCA","TCGA-C4-A0F7-01A","15:RFX7:56243125:-:15:LIPC:58538333:+:strandcross","RFX7--LIPC","ENSG00000181827","ENSG00000166035",4.0,1.0,1.0,1.0,0.886,0.00294117647059]
["TCGA_BLCA","TCGA-C4-A0F7-01A","15:TCF12:56921098:+:20:NCOA3:47583183:+:fusion","TCF12--NCOA3","ENSG00000140262","ENSG00000124151",16.0,2.0,1.0,1.0,0.698939071553417,0.00882352941176]
["TCGA_BLCA","TCGA-C4-A0F7-01A","15:TCF12:56921098:+:20:NCOA3:47622229:+:fusion","TCF12--NCOA3","ENSG00000140262","ENSG00000124151",2.0,1.0,1.0,1.0,0.806,0.00588235294118]
["TCGA_BLCA","TCGA-C4-A0F7-01A","19:ZNF829:36915796:-:12:RPL6:112410405:-:fusion","ZNF829--RPL6","ENSG00000185869","ENSG00000089009",2.0,1.0,1.0,1.0,0.596,0.00882352941176]
["TCGA_BLCA","TCGA-C4-A0F7-01A","1:PTPN14:214451805:-:1:NSL1:212739601:-:reg","PTPN14--NSL1","ENSG00000152104","ENSG00000117697",26.0,1.0,1.0,1.0,0.879649134122769,0.00588235294118]
["TCGA_BLCA","TCGA-C4-A0F7-01A","20:ZNF343:2492699:-:20:CSNK2A1:473950:-:reg","ZNF343--CSNK2A1","ENSG00000256566","ENSG00000101266",35.0,1.0,1.0,1.0,0.921784493679483,0.0]
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["TCGA_BLCA","TCGA-CF-A1HR-01A","19:NOTCH3:15165368:-:19:LINC01791:31207499:+:strandcross","NOTCH3--LINC01791","ENSG00000074181","ENSG00000267777",63.0,1.0,1.0,1.0,0.9050715085281,0.00657894736842]
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["TCGA_BLCA","TCGA-CF-A27C-01A","12:POLE:132687254:-:12:ANKS1B:98832136:-:reg","POLE--ANKS1B","ENSG00000177084","ENSG00000185046",6.0,1.0,1.0,1.0,0.983,0.0]
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["TCGA_BLCA","TCGA-CF-A3MF-01A","4:FGFR3:1806934:+:4:TACC3:1739702:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",68.0,22.0,17.0,17.0,0.985055075759783,"NA"]
["TCGA_BLCA","TCGA-CF-A3MG-01A","11:SHANK2:70798443:-:11:LRTOMT:72093496:+:strandcross","SHANK2--LRTOMT","ENSG00000162105","ENSG00000184154",16.0,1.0,1.0,1.0,0.830170409873608,0.00411522633745]
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["TCGA_BLCA","TCGA-CF-A3MH-01A","11:PLEKHA7:17013989:-:11:SERGEF:17788413:-:rev","PLEKHA7--SERGEF","ENSG00000166689","ENSG00000129158",5.0,2.0,2.0,2.0,0.615,"NA"]
["TCGA_BLCA","TCGA-CF-A3MH-01A","12:GNPTAB:101830559:-:12:WASHC3:102046119:-:rev","GNPTAB--WASHC3","ENSG00000111670","ENSG00000120860",3.0,2.0,2.0,2.0,0.948,"NA"]
["TCGA_BLCA","TCGA-CF-A3MH-01A","4:FGFR3:1806934:+:4:TACC3:1739702:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",1831.0,22.0,17.0,17.0,0.999997625128069,"NA"]
["TCGA_BLCA","TCGA-CF-A3MH-01A","6:WDR27:169602219:-:6:PHF10:169718918:-:rev","WDR27--PHF10","ENSG00000184465","ENSG00000130024",3.0,1.0,1.0,1.0,0.656,"NA"]
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["TCGA_BLCA","TCGA-CF-A47V-01A","11:PPFIA1:70325011:+:11:TPCN2:69135435:+:rev","PPFIA1--TPCN2","ENSG00000131626","ENSG00000162341",73.0,1.0,1.0,1.0,0.95336111712963,0.0]
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["TCGA_BLCA","TCGA-CF-A47V-01A","4:RNF4:2596329:+:4:ZFYVE28:2305536:-:strandcross","RNF4--ZFYVE28","ENSG00000063978","ENSG00000159733",4.0,1.0,1.0,1.0,0.751,0.00290697674419]
["TCGA_BLCA","TCGA-CF-A47V-01A","4:RNF4:2596329:+:4:ZFYVE28:2320271:-:strandcross","RNF4--ZFYVE28","ENSG00000063978","ENSG00000159733",43.0,1.0,1.0,1.0,0.902215580793219,0.0]
["TCGA_BLCA","TCGA-CF-A47V-01A","4:ZFYVE28:2418285:-:11:MYEOV:69341510:+:fusion","ZFYVE28--MYEOV","ENSG00000159733","ENSG00000172927",2.0,1.0,1.0,1.0,0.736,0.00290697674419]
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["TCGA_BLCA","TCGA-CF-A47X-01A","8:TRAPPC9:140360050:-:8:PLAT:42176151:-:reg","TRAPPC9--PLAT","ENSG00000167632","ENSG00000104368",4.0,1.0,1.0,1.0,0.183,0.0102040816327]
["TCGA_BLCA","TCGA-CF-A5UA-01A","12:FRS2:69470530:+:12:NUDT4:93394609:+:reg","FRS2--NUDT4","ENSG00000166225","ENSG00000173598",2.0,1.0,1.0,1.0,0.808,0.0]
["TCGA_BLCA","TCGA-CF-A7I0-01A","12:MRPL42:93487660:+:12:POLR3B:106509420:+:reg","MRPL42--POLR3B","ENSG00000198015","ENSG00000013503",4.0,1.0,1.0,1.0,0.675,0.0037037037037]
["TCGA_BLCA","TCGA-CF-A8HX-01A","11:ANO1:70132079:+:11:CWF19L2:107443049:-:strandcross","ANO1--CWF19L2","ENSG00000131620","ENSG00000152404",12.0,1.0,1.0,1.0,0.807,0.0]
["TCGA_BLCA","TCGA-CF-A8HX-01A","11:CCND1:69641511:+:11:AP003555.1:70056535:-:strandcross","CCND1--AP003555.1","ENSG00000110092","ENSG00000248844",5.0,1.0,1.0,1.0,0.448,0.00557103064067]
["TCGA_BLCA","TCGA-CF-A8HY-01A","11:NCAPD3:134192689:-:11:KBTBD3:106059109:-:reg","NCAPD3--KBTBD3","ENSG00000151503","ENSG00000182359",3.0,1.0,1.0,1.0,0.786,0.0]
["TCGA_BLCA","TCGA-CF-A8HY-01A","4:FGFR3:1806934:+:4:TACC3:1735731:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",152.0,3.0,3.0,3.0,0.654523368843695,"NA"]
["TCGA_BLCA","TCGA-CU-A0YN-01A","12:LMBR1L:49105924:-:19:KCNK6:38326593:+:fusion","LMBR1L--KCNK6","ENSG00000139636","ENSG00000099337",5.0,1.0,1.0,1.0,0.827,0.0]
["TCGA_BLCA","TCGA-CU-A0YN-01A","12:LMBR1L:49106961:-:19:KCNK6:38326593:+:fusion","LMBR1L--KCNK6","ENSG00000139636","ENSG00000099337",20.0,1.0,1.0,1.0,0.24761469311756,0.024024024024]
["TCGA_BLCA","TCGA-CU-A0YN-01A","12:LMBR1L:49110484:-:19:KCNK6:38326593:+:fusion","LMBR1L--KCNK6","ENSG00000139636","ENSG00000099337",31.0,1.0,1.0,1.0,0.681991867059983,0.003003003003]
["TCGA_BLCA","TCGA-CU-A0YN-01A","12:SLC2A13:40028301:-:9:FAM120A:93561109:+:fusion","SLC2A13--FAM120A","ENSG00000151229","ENSG00000048828",4.0,1.0,1.0,1.0,0.308,0.024024024024]
["TCGA_BLCA","TCGA-CU-A0YN-01A","19:ZNF606:57988207:-:19:RDH13:55064412:-:reg","ZNF606--RDH13","ENSG00000166704","ENSG00000160439",4.0,1.0,1.0,1.0,0.301,0.024024024024]
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["TCGA_BLCA","TCGA-CU-A0YO-01A","10:RBM17:6089193:+:10:PSAP:71834505:-:strandcross","RBM17--PSAP","ENSG00000134453","ENSG00000197746",9.0,1.0,1.0,1.0,0.572,0.010582010582]
["TCGA_BLCA","TCGA-CU-A0YO-01A","1:RAB4A:229271370:+:20:SNRPB:2467758:-:fusion","RAB4A--SNRPB","ENSG00000168118","ENSG00000125835",15.0,1.0,1.0,1.0,0.789,0.010582010582]
["TCGA_BLCA","TCGA-CU-A0YO-01A","20:SNRPB:2470688:-:1:RAB4A:229286486:+:fusion","SNRPB--RAB4A","ENSG00000125835","ENSG00000168118",2.0,1.0,1.0,1.0,0.889,0.00529100529101]
["TCGA_BLCA","TCGA-CU-A0YO-01A","21:UBE2G2:44801706:-:11:AP001979.2:133810169:-:fusion","UBE2G2--AP001979.2","ENSG00000184787","ENSG00000255258",4.0,1.0,1.0,1.0,0.839,0.00529100529101]
["TCGA_BLCA","TCGA-CU-A0YO-01A","5:AC091959.3:146219103:+:1:SLC35E2B:1666019:-:fusion","AC091959.3--SLC35E2B","ENSG00000275740","ENSG00000189339",10.0,1.0,1.0,1.0,0.538,0.010582010582]
["TCGA_BLCA","TCGA-CU-A0YO-01A","5:RBM27:146219103:+:1:SLC35E2B:1666019:-:fusion","RBM27--SLC35E2B","ENSG00000275740","ENSG00000189339",10.0,1.0,1.0,1.0,0.538,0.0133333333333]
["TCGA_BLCA","TCGA-CU-A0YO-01A","6:CRYBG1:106451832:+:6:PDSS2:107193854:-:strandcross","CRYBG1--PDSS2","ENSG00000112297","ENSG00000164494",4.0,1.0,1.0,1.0,0.849,0.00529100529101]
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["TCGA_BLCA","TCGA-CU-A0YR-01A","17:GRB7:39744207:+:17:PLXDC1:39067959:-:strandcross","GRB7--PLXDC1","ENSG00000141738","ENSG00000161381",4.0,1.0,1.0,1.0,0.887,0.0]
["TCGA_BLCA","TCGA-CU-A0YR-01A","20:TMEM189:50129546:-:6:OFCC1:9775889:-:fusion","TMEM189--OFCC1","ENSG00000124208","ENSG00000181355",1.0,1.0,1.0,1.0,0.795,0.0]
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["TCGA_BLCA","TCGA-CU-A3KJ-01A","10:INPP5A:132765846:+:10:CFAP46:132808904:-:strandcross","INPP5A--CFAP46","ENSG00000068383","ENSG00000171811",11.0,1.0,1.0,1.0,0.182,0.00757575757576]
["TCGA_BLCA","TCGA-CU-A3KJ-01A","17:HELZ:67120405:-:17:CEP112:65689218:-:reg","HELZ--CEP112","ENSG00000198265","ENSG00000154240",1.0,1.0,1.0,1.0,0.915,0.00642054574639]
["TCGA_BLCA","TCGA-CU-A3KJ-01A","X:TBL1X:9697429:+:X:GPR143:9725840:-:strandcross","TBL1X--GPR143","ENSG00000101849","ENSG00000101850",4.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-CU-A3QU-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.95,0.0]
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["TCGA_BLCA","TCGA-CU-A3QU-01A","17:SRR:2304017:+:17:DPH1:2033505:+:rev","SRR--DPH1","ENSG00000167720","ENSG00000108963",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-CU-A3QU-01A","4:HTT:3130423:+:4:GRK4:3013688:+:rev","HTT--GRK4","ENSG00000197386","ENSG00000125388",3.0,1.0,1.0,1.0,0.725,"NA"]
["TCGA_BLCA","TCGA-CU-A3YL-01A","9:NAA35:86013897:+:9:LAMC3:131075831:+:reg","NAA35--LAMC3","ENSG00000135040","ENSG00000050555",3.0,1.0,1.0,1.0,0.495,0.0148148148148]
["TCGA_BLCA","TCGA-CU-A5W6-01A","1:ENAH:225652686:-:1:UCHL5:193051817:-:reg","ENAH--UCHL5","ENSG00000154380","ENSG00000116750",11.0,1.0,1.0,1.0,0.358,0.012285012285]
["TCGA_BLCA","TCGA-CU-A5W6-01A","4:GAK:932043:-:17:LUC7L3:50736960:+:fusion","GAK--LUC7L3","ENSG00000178950","ENSG00000108848",8.0,1.0,1.0,1.0,0.536,0.00737100737101]
["TCGA_BLCA","TCGA-CU-A5W6-01A","4:LIMCH1:41524478:+:4:CWH43:49028629:+:reg","LIMCH1--CWH43","ENSG00000064042","ENSG00000109182",8.0,1.0,1.0,1.0,0.532,0.00737100737101]
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["TCGA_BLCA","TCGA-CU-A5W6-01A","17:NF1:31095369:+:17:RNF135:30997242:+:rev","NF1--RNF135","ENSG00000196712","ENSG00000181481",3.0,2.0,2.0,2.0,0.953,"NA"]
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["TCGA_BLCA","TCGA-CU-A72E-01A","5:RPS14:150446802:-:3:MB21D2:192799650:-:fusion","RPS14--MB21D2","ENSG00000164587","ENSG00000180611",7.0,1.0,1.0,1.0,0.967,0.00238663484487]
["TCGA_BLCA","TCGA-DK-A1A3-01A","19:PSMD8:38382228:+:15:MAP2K5:67806646:+:fusion","PSMD8--MAP2K5","ENSG00000099341","ENSG00000137764",2.0,1.0,1.0,1.0,0.75,0.0121951219512]
["TCGA_BLCA","TCGA-DK-A1A3-01A","1:ERRFI1:8026158:-:1:LUZP1:23109127:-:rev","ERRFI1--LUZP1","ENSG00000116285","ENSG00000169641",2.0,1.0,1.0,1.0,0.807,0.0121951219512]
["TCGA_BLCA","TCGA-DK-A1A3-01A","22:BCL2L13:17702386:+:19:ZNF383:37242469:+:fusion","BCL2L13--ZNF383","ENSG00000099968","ENSG00000188283",2.0,1.0,1.0,1.0,0.749,0.0121951219512]
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["TCGA_BLCA","TCGA-DK-A1A5-01A","17:COIL:56960775:-:17:CA4:60155314:+:strandcross","COIL--CA4","ENSG00000121058","ENSG00000167434",5.0,1.0,1.0,1.0,0.921,0.00215517241379]
["TCGA_BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:11:CTTN:70422940:+:fusion","ERBB2--CTTN","ENSG00000141736","ENSG00000085733",9.0,7.0,5.0,3.0,0.289,0.0193965517241]
["TCGA_BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:17:GALK1:75758127:-:strandcross","ERBB2--GALK1","ENSG00000141736","ENSG00000108479",2.0,2.0,1.0,1.0,0.954,0.00215517241379]
["TCGA_BLCA","TCGA-DK-A1A5-01A","21:LINC00649:33945895:+:21:RSPH1:42476047:-:strandcross","LINC00649--RSPH1","ENSG00000237945","ENSG00000160188",4.0,1.0,1.0,1.0,0.26,0.0193965517241]
["TCGA_BLCA","TCGA-DK-A1A6-01A","10:ZNF248:37831232:-:10:FAM107B:14530515:-:reg","ZNF248--FAM107B","ENSG00000198105","ENSG00000065809",5.0,1.0,1.0,1.0,0.459,0.00704225352113]
["TCGA_BLCA","TCGA-DK-A1A6-01A","11:ANO1:70171039:+:11:AP003555.1:70056535:-:strandcross","ANO1--AP003555.1","ENSG00000131620","ENSG00000248844",13.0,1.0,1.0,1.0,0.647,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","11:MRPL48:73808350:+:11:PRSS23:86932695:+:reg","MRPL48--PRSS23","ENSG00000175581","ENSG00000150687",3.0,1.0,1.0,1.0,0.265,0.0105633802817]
["TCGA_BLCA","TCGA-DK-A1A6-01A","11:MRPL48:73808350:+:11:PRSS23:86939020:+:reg","MRPL48--PRSS23","ENSG00000175581","ENSG00000150687",3.0,1.0,1.0,1.0,0.273,0.0105633802817]
["TCGA_BLCA","TCGA-DK-A1A6-01A","17:LINC00482:81309185:-:1:SERINC2:31432967:+:fusion","LINC00482--SERINC2","ENSG00000185168","ENSG00000168528",7.0,3.0,2.0,2.0,0.873,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","17:METTL16:2511759:-:17:VPS53:560573:-:reg","METTL16--VPS53","ENSG00000127804","ENSG00000141252",17.0,1.0,1.0,1.0,0.77797619028365,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:ESRP1:94668250:+:8:TRIQK:92954564:-:strandcross","ESRP1--TRIQK","ENSG00000104413","ENSG00000205133",2.0,1.0,1.0,1.0,0.851,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:STK3:98547969:-:11:AP001528.2:86922098:-:fusion","STK3--AP001528.2","ENSG00000104375","ENSG00000255471",3.0,1.0,1.0,1.0,0.872,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:STK3:98825515:-:11:MRPL48:73805027:+:fusion","STK3--MRPL48","ENSG00000104375","ENSG00000175581",21.0,1.0,1.0,1.0,0.613451944814717,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:VPS13B:99193057:+:19:MYO9B:17211647:+:fusion","VPS13B--MYO9B","ENSG00000132549","ENSG00000099331",5.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_BLCA","TCGA-DK-A1A6-01A","14:MARK3:103462461:+:14:TRAF3:102870185:+:rev","MARK3--TRAF3","ENSG00000075413","ENSG00000131323",2.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_BLCA","TCGA-DK-A1A6-01A","1:NDC1:53803928:-:1:YIPF1:53871488:-:rev","NDC1--YIPF1","ENSG00000058804","ENSG00000058799",2.0,1.0,1.0,1.0,0.735,"NA"]
["TCGA_BLCA","TCGA-DK-A1A6-01A","1:SNRNP40:31267871:-:1:ADGRB2:31744731:-:rev","SNRNP40--ADGRB2","ENSG00000060688","ENSG00000121753",9.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_BLCA","TCGA-DK-A1A7-01A","10:SHTN1:117005022:-:10:PRDX3:119174592:-:rev","SHTN1--PRDX3","ENSG00000187164","ENSG00000165672",3.0,1.0,1.0,1.0,0.875,0.0]
["TCGA_BLCA","TCGA-DK-A1A7-01A","6:HDDC2:125300538:-:6:TPD52L1:125262834:+:strandcross","HDDC2--TPD52L1","ENSG00000111906","ENSG00000111907",39.0,2.0,1.0,1.0,0.832526904549732,0.0]
["TCGA_BLCA","TCGA-DK-A1A7-01A","8:KAT6A:42048378:-:8:AC100818.1:35944244:+:strandcross","KAT6A--AC100818.1","ENSG00000083168","ENSG00000253452",5.0,1.0,1.0,1.0,0.342,0.00913242009132]
["TCGA_BLCA","TCGA-DK-A1A7-01A","1:NECTIN4:161089218:-:1:PFDN2:161102375:-:rev","NECTIN4--PFDN2","ENSG00000143217","ENSG00000143256",6.0,2.0,2.0,2.0,0.482,"NA"]
["TCGA_BLCA","TCGA-DK-A1AA-01A","10:VPS26A:69124280:+:10:HNRNPH3:68339440:+:rev","VPS26A--HNRNPH3","ENSG00000122958","ENSG00000096746",1.0,1.0,1.0,1.0,0.887,"NA"]
["TCGA_BLCA","TCGA-DK-A1AB-01A","15:B2M:44711613:+:15:EIF3J:44557489:+:rev","B2M--EIF3J","ENSG00000166710","ENSG00000104131",2.0,1.0,1.0,1.0,0.91,"NA"]
["TCGA_BLCA","TCGA-DK-A1AC-01A","11:KMT5B:68180132:-:17:MYO1D:32638835:-:fusion","KMT5B--MYO1D","ENSG00000110066","ENSG00000176658",13.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","11:KMT5B:68185781:-:17:MYO1D:32638835:-:fusion","KMT5B--MYO1D","ENSG00000110066","ENSG00000176658",2.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","17:TAOK1:29482288:+:8:RB1CC1:52642812:-:fusion","TAOK1--RB1CC1","ENSG00000160551","ENSG00000023287",65.0,1.0,1.0,1.0,0.981189617393138,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","4:SLC4A4:71236649:+:4:TMPRSS11E:68461821:+:rev","SLC4A4--TMPRSS11E","ENSG00000080493","ENSG00000087128",16.0,1.0,1.0,1.0,0.863465950540408,0.00293255131965]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51860845:-:17:RHOT1:32182757:+:fusion","PCMTD1--RHOT1","ENSG00000168300","ENSG00000126858",39.0,1.0,1.0,1.0,0.950323892401772,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51860861:-:17:RHOT1:32182757:+:fusion","PCMTD1--RHOT1","ENSG00000168300","ENSG00000126858",2.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51898930:-:11:PPP1CA:67401199:-:fusion","PCMTD1--PPP1CA","ENSG00000168300","ENSG00000172531",4.0,1.0,1.0,1.0,0.705,0.00879765395894]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51898930:-:17:RHOT1:32182757:+:fusion","PCMTD1--RHOT1","ENSG00000168300","ENSG00000126858",3.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:SNTG1:50172635:+:8:AC064807.3:51996267:-:strandcross","SNTG1--AC064807.3","ENSG00000147481","ENSG00000254136",43.0,1.0,1.0,1.0,0.915233603999015,0.0]
["TCGA_BLCA","TCGA-DK-A1AC-01A","14:TTC7B:90816175:-:14:RPS6KA5:90875360:-:rev","TTC7B--RPS6KA5","ENSG00000165914","ENSG00000100784",2.0,1.0,1.0,1.0,0.711,"NA"]
["TCGA_BLCA","TCGA-DK-A1AD-01A","12:EEA1:92891629:-:12:CRADD:93849970:+:strandcross","EEA1--CRADD","ENSG00000102189","ENSG00000169372",21.0,1.0,1.0,1.0,0.906174495857842,0.00255754475703]
["TCGA_BLCA","TCGA-DK-A1AD-01A","13:GTF2F2:45120721:+:1:S100A3:153548490:-:fusion","GTF2F2--S100A3","ENSG00000188342","ENSG00000188015",18.0,1.0,1.0,1.0,0.88739489399474,0.00255754475703]
["TCGA_BLCA","TCGA-DK-A1AD-01A","13:GTF2F2:45120721:+:1:S100A4:153544809:-:fusion","GTF2F2--S100A4","ENSG00000188342","ENSG00000196154",169.0,1.0,1.0,1.0,0.975793406663036,0.0]
["TCGA_BLCA","TCGA-DK-A1AD-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",3.0,44.0,40.0,34.0,0.318,0.0179028132992]
["TCGA_BLCA","TCGA-DK-A1AD-01A","22:DGCR2:19063202:-:22:Z99774.1:26669438:-:rev","DGCR2--Z99774.1","ENSG00000070413","ENSG00000206028",6.0,1.0,1.0,1.0,0.448,0.0153452685422]
["TCGA_BLCA","TCGA-DK-A1AD-01A","2:EPHA4:221563731:-:2:MTX2:176296860:+:strandcross","EPHA4--MTX2","ENSG00000116106","ENSG00000128654",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BLCA","TCGA-DK-A1AD-01A","3:PPARG:12417154:+:6:CDKAL1:20649293:+:fusion","PPARG--CDKAL1","ENSG00000132170","ENSG00000145996",6.0,1.0,1.0,1.0,0.372,0.0153452685422]
["TCGA_BLCA","TCGA-DK-A1AD-01A","8:PTK2:140983842:-:4:UGT2A3:68932759:-:fusion","PTK2--UGT2A3","ENSG00000169398","ENSG00000135220",4.0,1.0,1.0,1.0,0.342,0.0179028132992]
["TCGA_BLCA","TCGA-DK-A1AD-01A","8:PTK2:141001125:-:4:UGT2A3:68932759:-:fusion","PTK2--UGT2A3","ENSG00000169398","ENSG00000135220",23.0,1.0,1.0,1.0,0.590328674237969,0.0076726342711]
["TCGA_BLCA","TCGA-DK-A1AD-01A","15:ALDH1A2:58225614:-:15:ADAM10:58611991:-:rev","ALDH1A2--ADAM10","ENSG00000128918","ENSG00000137845",5.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BLCA","TCGA-DK-A1AD-01A","9:KDM4C:6893232:+:9:UHRF2:6420912:+:rev","KDM4C--UHRF2","ENSG00000107077","ENSG00000147854",2.0,3.0,3.0,2.0,0.905,"NA"]
["TCGA_BLCA","TCGA-DK-A1AE-01A","8:FZD6:103300284:+:8:AC104248.1:109044127:-:strandcross","FZD6--AC104248.1","ENSG00000164930","ENSG00000253796",28.0,1.0,1.0,1.0,0.868763849666726,0.00446428571429]
["TCGA_BLCA","TCGA-DK-A1AE-01A","9:FOCAD:20953065:+:9:LINC01239:22674443:+:reg","FOCAD--LINC01239","ENSG00000188352","ENSG00000234840",1.0,1.0,1.0,1.0,0.747,0.00446428571429]
["TCGA_BLCA","TCGA-DK-A1AE-01A","X:AC073529.1:11055936:-:X:FAM9B:9033075:-:reg","AC073529.1--FAM9B","ENSG00000234129","ENSG00000177138",2.0,1.0,1.0,1.0,0.203,0.0178571428571]
["TCGA_BLCA","TCGA-DK-A1AF-01A","11:C2CD3:74048205:-:11:MYEOV:69341510:+:strandcross","C2CD3--MYEOV","ENSG00000168014","ENSG00000172927",2.0,1.0,1.0,1.0,0.915,0.00949367088608]
["TCGA_BLCA","TCGA-DK-A1AF-01A","3:NEK4:52737586:-:3:SETD2:47067118:-:reg","NEK4--SETD2","ENSG00000114904","ENSG00000181555",5.0,1.0,1.0,1.0,0.934,0.00316455696203]
["TCGA_BLCA","TCGA-DK-A2HX-01A","4:FBXW7:152534941:-:4:ARHGAP10:148071993:+:strandcross","FBXW7--ARHGAP10","ENSG00000109670","ENSG00000071205",9.0,1.0,1.0,1.0,0.581,0.0147928994083]
["TCGA_BLCA","TCGA-DK-A2I1-01A","10:SPAG6:22368678:+:10:PLXDC2:20279703:+:rev","SPAG6--PLXDC2","ENSG00000077327","ENSG00000120594",6.0,1.0,1.0,1.0,0.459,0.00663716814159]
["TCGA_BLCA","TCGA-DK-A2I1-01A","16:IQCK:19764112:+:16:CASC16:52591067:-:strandcross","IQCK--CASC16","ENSG00000174628","ENSG00000249231",2.0,1.0,1.0,1.0,0.477,0.00663716814159]
["TCGA_BLCA","TCGA-DK-A2I1-01A","16:NFAT5:69566374:+:16:CCDC113:58258368:+:rev","NFAT5--CCDC113","ENSG00000102908","ENSG00000103021",4.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_BLCA","TCGA-DK-A2I1-01A","16:NFAT5:69568548:+:16:CCDC113:58252727:+:rev","NFAT5--CCDC113","ENSG00000102908","ENSG00000103021",3.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BLCA","TCGA-DK-A2I1-01A","16:VPS35:46689131:-:16:PHKB:47696381:+:strandcross","VPS35--PHKB","ENSG00000069329","ENSG00000102893",62.0,1.0,1.0,1.0,0.960939657084515,0.0]
["TCGA_BLCA","TCGA-DK-A2I1-01A","16:ZNF500:4760492:-:16:MMP25:3057033:+:strandcross","ZNF500--MMP25","ENSG00000103199","ENSG00000008516",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BLCA","TCGA-DK-A2I1-01A","22:FBLN1:45503064:+:3:CNBP:129171771:-:fusion","FBLN1--CNBP","ENSG00000077942","ENSG00000169714",2.0,1.0,1.0,1.0,0.883,0.00221238938053]
["TCGA_BLCA","TCGA-DK-A2I1-01A","9:DIRAS2:90642752:-:9:GNA14:77434522:-:reg","DIRAS2--GNA14","ENSG00000165023","ENSG00000156049",9.0,1.0,1.0,1.0,0.516,0.00442477876106]
["TCGA_BLCA","TCGA-DK-A2I1-01A","9:FGD3:92947729:+:9:SYK:90843858:+:rev","FGD3--SYK","ENSG00000127084","ENSG00000165025",3.0,1.0,1.0,1.0,0.752,0.00442477876106]
["TCGA_BLCA","TCGA-DK-A2I1-01A","19:SMG9:43737597:-:19:KCNN4:43767089:-:rev","SMG9--KCNN4","ENSG00000105771","ENSG00000104783",9.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-DK-A2I1-01A","20:RBL1:37095773:-:20:MROH8:37101418:-:rev","RBL1--MROH8","ENSG00000080839","ENSG00000101353",2.0,1.0,1.0,1.0,0.414,"NA"]
["TCGA_BLCA","TCGA-DK-A2I1-01A","2:DGUOK:73927052:+:2:STAMBP:73859254:+:rev","DGUOK--STAMBP","ENSG00000114956","ENSG00000124356",9.0,1.0,1.0,1.0,0.773,"NA"]
["TCGA_BLCA","TCGA-DK-A2I1-01A","3:TSEN2:12503784:+:3:PPARG:12416704:+:rev","TSEN2--PPARG","ENSG00000154743","ENSG00000132170",4.0,1.0,1.0,1.0,0.522,"NA"]
["TCGA_BLCA","TCGA-DK-A2I1-01A","3:TSEN2:12505231:+:3:PPARG:12416704:+:rev","TSEN2--PPARG","ENSG00000154743","ENSG00000132170",6.0,1.0,1.0,1.0,0.814,"NA"]
["TCGA_BLCA","TCGA-DK-A2I2-01A","17:ACACA:37406262:-:17:TADA2A:37423509:+:strandcross","ACACA--TADA2A","ENSG00000278540","ENSG00000276234",7.0,2.0,1.0,1.0,0.325,0.00436681222707]
["TCGA_BLCA","TCGA-DK-A2I2-01A","17:NUFIP2:29293783:-:1:ZFP69B:40450656:+:fusion","NUFIP2--ZFP69B","ENSG00000108256","ENSG00000187801",3.0,1.0,1.0,1.0,0.98,0.00444444444444]
["TCGA_BLCA","TCGA-DK-A2I2-01A","3:LINC02005:73808668:+:1:NME7:169132817:-:fusion","LINC02005--NME7","ENSG00000242741","ENSG00000143156",3.0,1.0,1.0,1.0,0.809,0.00444444444444]
["TCGA_BLCA","TCGA-DK-A2I2-01A","14:RPL36AL:49620562:-:14:MAP4K5:50456594:-:rev","RPL36AL--MAP4K5","ENSG00000165502","ENSG00000012983",3.0,1.0,1.0,1.0,0.926,"NA"]
["TCGA_BLCA","TCGA-DK-A2I2-01A","9:ZBTB26:122931064:-:9:STRBP:123184298:-:rev","ZBTB26--STRBP","ENSG00000171448","ENSG00000165209",2.0,1.0,1.0,1.0,0.855,"NA"]
["TCGA_BLCA","TCGA-DK-A2I6-01A","13:CAB39L:49350744:-:8:CPQ:96834973:+:fusion","CAB39L--CPQ","ENSG00000102547","ENSG00000104324",5.0,1.0,1.0,1.0,0.734,0.0028901734104]
["TCGA_BLCA","TCGA-DK-A2I6-01A","17:ERBB2:39712448:+:8:TATDN1:124495542:-:fusion","ERBB2--TATDN1","ENSG00000141736","ENSG00000147687",15.0,1.0,1.0,1.0,0.625,0.0028901734104]
["TCGA_BLCA","TCGA-DK-A2I6-01A","17:PGAP3:39684597:-:17:STARD3:39657008:+:strandcross","PGAP3--STARD3","ENSG00000161395","ENSG00000131748",30.0,1.0,1.0,1.0,0.893879603938297,0.0]
["TCGA_BLCA","TCGA-DK-A2I6-01A","18:RBBP8:23016924:+:17:TP53:7676622:-:fusion","RBBP8--TP53","ENSG00000101773","ENSG00000141510",8.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BLCA","TCGA-DK-A2I6-01A","19:ZNF577:51886821:-:19:YIF1B:38309057:-:reg","ZNF577--YIF1B","ENSG00000161551","ENSG00000167645",6.0,1.0,1.0,1.0,0.597,0.0028901734104]
["TCGA_BLCA","TCGA-DK-A2I6-01A","8:MTSS1:124727884:-:17:ERBB2:39706990:+:fusion","MTSS1--ERBB2","ENSG00000170873","ENSG00000141736",9.0,1.0,1.0,1.0,0.812,0.0]
["TCGA_BLCA","TCGA-DK-A2I6-01A","8:VPS13B:99391704:+:13:CDADC1:49291684:+:fusion","VPS13B--CDADC1","ENSG00000132549","ENSG00000102543",13.0,1.0,1.0,1.0,0.972,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:ATG2B:96316533:-:14:SLC22A17:23346936:-:reg","ATG2B--SLC22A17","ENSG00000066739","ENSG00000092096",17.0,1.0,1.0,1.0,0.849510124298282,0.00607902735562]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:ENTPD5:73970010:-:14:NUBPL:31826629:+:strandcross","ENTPD5--NUBPL","ENSG00000187097","ENSG00000151413",12.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:NUBPL:31787873:+:14:AL049869.2:64552888:-:strandcross","NUBPL--AL049869.2","ENSG00000151413","ENSG00000259076",1.0,1.0,1.0,1.0,0.773,0.00911854103343]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:NUBPL:31787873:+:14:AL049869.2:64559526:-:strandcross","NUBPL--AL049869.2","ENSG00000151413","ENSG00000259076",4.0,1.0,1.0,1.0,0.449,0.0121580547112]
["TCGA_BLCA","TCGA-DK-A3IK-01A","17:MYO18A:29180313:-:17:RNF135:30984617:+:strandcross","MYO18A--RNF135","ENSG00000196535","ENSG00000181481",2.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","1:NOS1AP:162154476:+:1:LRRC52:165563505:+:reg","NOS1AP--LRRC52","ENSG00000198929","ENSG00000162763",7.0,1.0,1.0,1.0,0.216,0.0303951367781]
["TCGA_BLCA","TCGA-DK-A3IK-01A","22:MED15:20507746:+:22:GNB1L:19821375:-:strandcross","MED15--GNB1L","ENSG00000099917","ENSG00000185838",18.0,1.0,1.0,1.0,0.589157145220938,0.00911854103343]
["TCGA_BLCA","TCGA-DK-A3IK-01A","2:LTBP1:33188851:+:2:PLB1:28548860:+:rev","LTBP1--PLB1","ENSG00000049323","ENSG00000163803",10.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","2:RBMS1:160367216:-:17:CACNB1:39191593:-:fusion","RBMS1--CACNB1","ENSG00000153250","ENSG00000067191",2.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","6:MAP3K5:136791710:-:6:PERP:138096494:-:rev","MAP3K5--PERP","ENSG00000197442","ENSG00000112378",12.0,2.0,1.0,1.0,0.686,0.00911854103343]
["TCGA_BLCA","TCGA-DK-A3IK-01A","6:ZFAND3:37820016:+:6:C6orf48:31835411:+:rev","ZFAND3--C6orf48","ENSG00000156639","ENSG00000204387",4.0,1.0,1.0,1.0,0.35,0.0182370820669]
["TCGA_BLCA","TCGA-DK-A3IK-01A","2:XRCC5:216127674:+:2:ATIC:215332382:+:rev","XRCC5--ATIC","ENSG00000079246","ENSG00000138363",2.0,1.0,1.0,1.0,0.985,"NA"]
["TCGA_BLCA","TCGA-DK-A3IM-01A","12:MARS:57504299:+:12:NOP2:6563946:-:strandcross","MARS--NOP2","ENSG00000166986","ENSG00000111641",5.0,1.0,1.0,1.0,0.198,0.0335570469799]
["TCGA_BLCA","TCGA-DK-A3IM-01A","20:PSMF1:1135306:+:6:GMDS-AS1:2283499:+:fusion","PSMF1--GMDS-AS1","ENSG00000125818","ENSG00000250903",2.0,1.0,1.0,1.0,0.943,0.00223713646532]
["TCGA_BLCA","TCGA-DK-A3IM-01A","20:PSMF1:1135306:+:6:GMDS-AS1:2352339:+:fusion","PSMF1--GMDS-AS1","ENSG00000125818","ENSG00000250903",3.0,1.0,1.0,1.0,0.737,0.00671140939597]
["TCGA_BLCA","TCGA-DK-A3IM-01A","3:FNDC3B:172112590:+:3:LINC01192:163337236:-:strandcross","FNDC3B--LINC01192","ENSG00000075420","ENSG00000241369",3.0,1.0,1.0,1.0,0.826,0.00671140939597]
["TCGA_BLCA","TCGA-DK-A3IM-01A","8:FAM49B:129903312:-:1:AK5:77483317:+:fusion","FAM49B--AK5","ENSG00000153310","ENSG00000154027",6.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_BLCA","TCGA-DK-A3IN-01A","11:GALNT18:11432621:-:18:AC012254.2:47157537:-:fusion","GALNT18--AC012254.2","ENSG00000110328","ENSG00000267228",22.0,1.0,1.0,1.0,0.88642729981693,0.0]
["TCGA_BLCA","TCGA-DK-A3IN-01A","11:GALNT18:11432621:-:18:IER3IP1:47157537:-:fusion","GALNT18--IER3IP1","ENSG00000110328","ENSG00000267228",22.0,1.0,1.0,1.0,0.88642729981693,0.0]
["TCGA_BLCA","TCGA-DK-A3IN-01A","22:CABIN1:24119698:+:16:GRIN2A:9891100:-:fusion","CABIN1--GRIN2A","ENSG00000099991","ENSG00000183454",5.0,1.0,1.0,1.0,0.605,0.0117647058824]
["TCGA_BLCA","TCGA-DK-A3IN-01A","22:LIMK2:31268200:+:22:CDC45:19516527:+:rev","LIMK2--CDC45","ENSG00000182541","ENSG00000093009",41.0,1.0,1.0,1.0,0.425677872166643,0.0176470588235]
["TCGA_BLCA","TCGA-DK-A3IN-01A","1:PEF1:31632495:-:1:AL445248.1:32054514:-:rev","PEF1--AL445248.1","ENSG00000162517","ENSG00000203325",3.0,1.0,1.0,1.0,0.528,"NA"]
["TCGA_BLCA","TCGA-DK-A3IN-01A","4:TAPT1:16226259:-:4:LDB2:16595875:-:rev","TAPT1--LDB2","ENSG00000169762","ENSG00000169744",3.0,1.0,1.0,1.0,0.728,"NA"]
["TCGA_BLCA","TCGA-DK-A3IQ-01A","17:KANSL1:46067549:-:17:NSF:46749773:+:strandcross","KANSL1--NSF","ENSG00000120071","ENSG00000073969",5.0,1.0,1.0,1.0,0.933,0.00248756218905]
["TCGA_BLCA","TCGA-DK-A3IQ-01A","3:KLHL18:47283094:+:3:HEMK1:50570931:+:reg","KLHL18--HEMK1","ENSG00000114648","ENSG00000114735",2.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-DK-A3IQ-01A","9:KANK1:707247:+:9:NFX1:33338510:+:reg","KANK1--NFX1","ENSG00000107104","ENSG00000086102",3.0,1.0,1.0,1.0,0.336,0.0124378109453]
["TCGA_BLCA","TCGA-DK-A3IS-01A","11:PRDX5:64321068:+:12:LGR5:71583647:+:fusion","PRDX5--LGR5","ENSG00000126432","ENSG00000139292",9.0,1.0,1.0,1.0,0.949,0.0]
["TCGA_BLCA","TCGA-DK-A3IS-01A","20:CYP24A1:54157169:-:4:AC093323.1:6674993:+:fusion","CYP24A1--AC093323.1","ENSG00000019186","ENSG00000170846",2.0,1.0,1.0,1.0,0.661,0.00815217391304]
["TCGA_BLCA","TCGA-DK-A3IS-01A","21:AP001065.1:44486230:+:21:AP000317.1:34324736:+:rev","AP001065.1--AP000317.1","ENSG00000228709","ENSG00000214955",29.0,1.0,1.0,1.0,0.754249499639688,0.0054347826087]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:GPR78:8558981:+:4:POLN:2128227:-:strandcross","GPR78--POLN","ENSG00000155269","ENSG00000130997",2.0,1.0,1.0,1.0,0.341,0.0135869565217]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:GPR78:8558981:+:4:POLN:2131290:-:strandcross","GPR78--POLN","ENSG00000155269","ENSG00000130997",25.0,1.0,1.0,1.0,0.915119569753434,0.00271739130435]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:GPR78:8558981:+:4:POLN:2156853:-:strandcross","GPR78--POLN","ENSG00000155269","ENSG00000130997",3.0,1.0,1.0,1.0,0.792,0.0054347826087]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:SORCS2:7193126:+:4:SH3TC1:8240698:+:reg","SORCS2--SH3TC1","ENSG00000184985","ENSG00000125089",2.0,1.0,1.0,1.0,0.79,0.0054347826087]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:TBC1D14:6924111:+:4:HTRA3:8282437:+:reg","TBC1D14--HTRA3","ENSG00000132405","ENSG00000170801",11.0,1.0,1.0,1.0,0.335,0.0135869565217]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:SLC2A9:10018975:-:4:WDR1:10088741:-:rev","SLC2A9--WDR1","ENSG00000109667","ENSG00000071127",2.0,1.0,1.0,1.0,0.756,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,44.0,40.0,34.0,0.973,0.0]
["TCGA_BLCA","TCGA-DK-A3IT-01A","2:WDR33:127763062:-:20:GNAS:58895612:+:fusion","WDR33--GNAS","ENSG00000136709","ENSG00000087460",3.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BLCA","TCGA-DK-A3IT-01A","16:KIFC3:57779877:-:16:CNGB1:57967294:-:rev","KIFC3--CNGB1","ENSG00000140859","ENSG00000070729",2.0,1.0,1.0,1.0,0.855,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","17:LINC00511:72592203:-:17:SLC39A11:72736719:-:rev","LINC00511--SLC39A11","ENSG00000227036","ENSG00000133195",9.0,6.0,5.0,3.0,0.636,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","2:AFTPH:64553409:+:2:UGP2:63882466:+:rev","AFTPH--UGP2","ENSG00000119844","ENSG00000169764",1.0,1.0,1.0,1.0,0.802,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","3:AC131160.1:183884722:-:3:ABCC5:183938060:-:rev","AC131160.1--ABCC5","ENSG00000283765","ENSG00000114770",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BLCA","TCGA-DK-A3IV-01A","20:TRPC4AP:35035123:-:20:ASIP:34260365:+:strandcross","TRPC4AP--ASIP","ENSG00000100991","ENSG00000101440",30.0,1.0,1.0,1.0,0.920862942156356,0.00271739130435]
["TCGA_BLCA","TCGA-DK-A3IV-01A","5:MAT2B:163512196:+:5:RARS:168493894:+:reg","MAT2B--RARS","ENSG00000038274","ENSG00000113643",3.0,2.0,1.0,1.0,0.874,0.0]
["TCGA_BLCA","TCGA-DK-A3IV-01A","7:ANLN:36443862:+:7:POU6F2:39085860:+:reg","ANLN--POU6F2","ENSG00000011426","ENSG00000106536",4.0,1.0,1.0,1.0,0.763,0.00271739130435]
["TCGA_BLCA","TCGA-DK-A3IV-01A","7:VPS41:38869146:-:7:NPSR1:34811770:+:strandcross","VPS41--NPSR1","ENSG00000006715","ENSG00000187258",3.0,1.0,1.0,1.0,0.952,0.00271739130435]
["TCGA_BLCA","TCGA-DK-A3IV-01A","15:PCLAF:64376743:-:15:MTFMT:65021616:-:rev","PCLAF--MTFMT","ENSG00000259316","ENSG00000103707",2.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_BLCA","TCGA-DK-A3IV-01A","20:TPX2:31757582:+:20:REM1:31482287:+:rev","TPX2--REM1","ENSG00000088325","ENSG00000088320",14.0,1.0,1.0,1.0,0.891,"NA"]
["TCGA_BLCA","TCGA-DK-A3WX-01A","14:MMP14:22843418:+:14:TRAC:22549638:+:rev","MMP14--TRAC","ENSG00000157227","ENSG00000277734",2.0,1.0,1.0,1.0,0.594,"NA"]
["TCGA_BLCA","TCGA-DK-A3WY-01A","3:PHLDB2:111859576:+:3:KCNAB1:156421616:+:reg","PHLDB2--KCNAB1","ENSG00000144824","ENSG00000169282",2.0,1.0,1.0,1.0,0.849,0.00561797752809]
["TCGA_BLCA","TCGA-DK-A3WY-01A","6:DTNBP1:15615267:-:6:AL022068.1:19325798:-:rev","DTNBP1--AL022068.1","ENSG00000047579","ENSG00000228412",4.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_BLCA","TCGA-DK-A3WY-01A","6:KCTD20:36443111:+:6:ETV7:36354687:-:strandcross","KCTD20--ETV7","ENSG00000112078","ENSG00000010030",8.0,1.0,1.0,1.0,0.924,0.0]
["TCGA_BLCA","TCGA-DK-A3X1-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",6.0,44.0,40.0,34.0,0.401,0.0112359550562]
["TCGA_BLCA","TCGA-DK-A3X1-01A","17:BCAS3:60679540:+:7:AC244472.2:142588062:+:fusion","BCAS3--AC244472.2","ENSG00000141376","ENSG00000275743",7.0,1.0,1.0,1.0,0.692,0.00561797752809]
["TCGA_BLCA","TCGA-DK-A3X1-01A","1:GAS5:173866761:-:1:IFI16:159032524:+:strandcross","GAS5--IFI16","ENSG00000234741","ENSG00000163565",407.0,1.0,1.0,1.0,0.276439735831359,0.0140449438202]
["TCGA_BLCA","TCGA-DK-A3X1-01A","1:RABGAP1L:174159657:+:1:AL356276.1:157695965:+:rev","RABGAP1L--AL356276.1","ENSG00000152061","ENSG00000227217",3.0,1.0,1.0,1.0,0.445,0.00842696629213]
["TCGA_BLCA","TCGA-DK-A3X1-01A","20:JPH2:44159618:-:20:PXMP4:33714736:-:reg","JPH2--PXMP4","ENSG00000149596","ENSG00000101417",2.0,1.0,1.0,1.0,0.948,0.00280898876404]
["TCGA_BLCA","TCGA-DK-A3X1-01A","20:JPH2:44159618:-:20:ZNF341-AS1:33787777:-:reg","JPH2--ZNF341-AS1","ENSG00000149596","ENSG00000230753",56.0,1.0,1.0,1.0,0.968404272679107,0.00280898876404]
["TCGA_BLCA","TCGA-DK-A3X1-01A","4:SLC2A9:10018975:-:15:RAD51:40706177:+:fusion","SLC2A9--RAD51","ENSG00000109667","ENSG00000051180",2.0,1.0,1.0,1.0,0.986,0.00280898876404]
["TCGA_BLCA","TCGA-DK-A3X1-01A","8:MRPS28:80002999:-:8:AC103853.1:105662941:-:rev","MRPS28--AC103853.1","ENSG00000147586","ENSG00000253420",9.0,1.0,1.0,1.0,0.692,0.00561797752809]
["TCGA_BLCA","TCGA-DK-A3X2-01A","19:FXYD3:35119416:+:19:TARM1:54075114:-:strandcross","FXYD3--TARM1","ENSG00000089356","ENSG00000248385",7.0,1.0,1.0,1.0,0.964,0.00287356321839]
["TCGA_BLCA","TCGA-DK-A3X2-01A","19:FXYD3:35119416:+:19:TARM1:54075918:-:strandcross","FXYD3--TARM1","ENSG00000089356","ENSG00000248385",21.0,1.0,1.0,1.0,0.708031350052574,0.00862068965517]
["TCGA_BLCA","TCGA-DK-A3X2-01A","19:ZFP30:37644610:-:19:CEACAM7:41687221:-:rev","ZFP30--CEACAM7","ENSG00000120784","ENSG00000007306",28.0,1.0,1.0,1.0,0.682991798443459,0.00862068965517]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177160871:-:3:LINC00578:177539395:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",6.0,1.0,1.0,1.0,0.868,0.00574712643678]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177197121:-:3:LINC00578:177539395:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",8.0,1.0,1.0,1.0,0.858,0.00574712643678]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177197121:-:3:LINC00578:177629417:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",4.0,1.0,1.0,1.0,0.751,0.00862068965517]
["TCGA_BLCA","TCGA-DK-A3X2-01A","10:FGFR2:121538592:-:10:ATE1:121743858:-:rev","FGFR2--ATE1","ENSG00000066468","ENSG00000107669",1.0,2.0,3.0,2.0,0.98,"NA"]
["TCGA_BLCA","TCGA-DK-A3X2-01A","11:CD44:35201787:+:11:PDHX:34931404:+:rev","CD44--PDHX","ENSG00000026508","ENSG00000110435",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-DK-A3X2-01A","15:HERC1:63833827:-:15:DAPK2:63939361:-:rev","HERC1--DAPK2","ENSG00000103657","ENSG00000035664",3.0,1.0,1.0,1.0,0.514,"NA"]
["TCGA_BLCA","TCGA-DK-A3X2-01A","17:NUP85:75213119:+:17:KCTD2:75049220:+:rev","NUP85--KCTD2","ENSG00000125450","ENSG00000180901",3.0,1.0,1.0,1.0,0.411,"NA"]
["TCGA_BLCA","TCGA-DK-A3X2-01A","18:DSG4:31409808:+:18:DSCAS:31162535:+:rev","DSG4--DSCAS","ENSG00000175065","ENSG00000265888",17.0,1.0,1.0,1.0,0.464583489964635,"NA"]
["TCGA_BLCA","TCGA-DK-A3X2-01A","1:SPEN:15848150:+:1:EFHD2:15425871:+:rev","SPEN--EFHD2","ENSG00000065526","ENSG00000142634",5.0,1.0,1.0,1.0,0.872,"NA"]
["TCGA_BLCA","TCGA-DK-A6AV-01A","11:RPS6KB2:67429595:+:16:ST3GAL2:70388546:-:fusion","RPS6KB2--ST3GAL2","ENSG00000175634","ENSG00000157350",8.0,1.0,1.0,1.0,0.364,0.0176211453744]
["TCGA_BLCA","TCGA-DK-A6AV-01A","16:CDH3:68684824:+:11:CHKA:68068937:-:fusion","CDH3--CHKA","ENSG00000062038","ENSG00000110721",141.0,1.0,1.0,1.0,0.970138487790076,0.0]
["TCGA_BLCA","TCGA-DK-A6AV-01A","16:TANGO6:68930295:+:11:FGF3:69816423:-:fusion","TANGO6--FGF3","ENSG00000103047","ENSG00000186895",3.0,1.0,1.0,1.0,0.2,0.0308370044053]
["TCGA_BLCA","TCGA-DK-A6AV-01A","19:CLPP:6364639:+:18:AP000919.2:2960618:+:fusion","CLPP--AP000919.2","ENSG00000125656","ENSG00000265907",3.0,1.0,1.0,1.0,0.614,0.00881057268722]
["TCGA_BLCA","TCGA-DK-A6AV-01A","17:LINC00511:72592203:-:17:SDK2:73338940:-:rev","LINC00511--SDK2","ENSG00000227036","ENSG00000069188",3.0,1.0,1.0,1.0,0.832,"NA"]
["TCGA_BLCA","TCGA-DK-A6B1-01A","16:GSPT1:11891062:-:16:RBFOX1:7328648:+:strandcross","GSPT1--RBFOX1","ENSG00000103342","ENSG00000078328",5.0,1.0,1.0,1.0,0.896,0.0]
["TCGA_BLCA","TCGA-DK-A6B1-01A","1:ASH1L:155438327:-:1:SPRR2G:153150131:-:reg","ASH1L--SPRR2G","ENSG00000116539","ENSG00000159516",3.0,1.0,1.0,1.0,0.453,0.00414078674948]
["TCGA_BLCA","TCGA-DK-A6B1-01A","6:MRS2:24405241:+:6:DCDC2:24205102:-:strandcross","MRS2--DCDC2","ENSG00000124532","ENSG00000146038",3.0,1.0,1.0,1.0,0.682,0.0]
["TCGA_BLCA","TCGA-DK-A6B1-01A","13:ZDHHC20:21459054:-:13:MICU2:21514418:-:rev","ZDHHC20--MICU2","ENSG00000180776","ENSG00000165487",1.0,1.0,1.0,1.0,0.951,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","12:XPOT:64439315:+:12:EPYC:91002578:-:strandcross","XPOT--EPYC","ENSG00000184575","ENSG00000083782",11.0,1.0,1.0,1.0,0.406,0.010989010989]
["TCGA_BLCA","TCGA-DK-A6B2-01A","19:EPS15L1:16471913:-:16:BCAR4:11820297:-:fusion","EPS15L1--BCAR4","ENSG00000127527","ENSG00000262117",23.0,1.0,1.0,1.0,0.882484340871341,0.0]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:POGZ:151442081:-:16:LINC01566:35379969:+:fusion","POGZ--LINC01566","ENSG00000143442","ENSG00000259841",4.0,1.0,1.0,1.0,0.385,0.0128205128205]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:POGZ:151442081:-:16:LINC01566:35385879:+:fusion","POGZ--LINC01566","ENSG00000143442","ENSG00000259841",8.0,1.0,1.0,1.0,0.416,0.010989010989]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:SERINC2:31413304:+:1:PFDN2:161102375:-:strandcross","SERINC2--PFDN2","ENSG00000168528","ENSG00000143256",55.0,1.0,1.0,1.0,0.970042446385997,0.0]
["TCGA_BLCA","TCGA-DK-A6B2-01A","3:SENP2:185590169:+:17:ABR:1011985:-:fusion","SENP2--ABR","ENSG00000163904","ENSG00000159842",21.0,1.0,1.0,1.0,0.868624366540601,0.0]
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["TCGA_BLCA","TCGA-DK-A6B2-01A","10:TSPAN15:69504485:+:10:HK1:69343827:+:rev","TSPAN15--HK1","ENSG00000099282","ENSG00000156515",2.0,1.0,1.0,1.0,0.704,"NA"]
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["TCGA_BLCA","TCGA-DK-A6B2-01A","11:AP2A2:946963:+:11:TSPAN4:862550:+:rev","AP2A2--TSPAN4","ENSG00000183020","ENSG00000214063",2.0,1.0,1.0,1.0,0.585,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:GMEB1:28693045:+:1:TRNAU1AP:28560633:+:rev","GMEB1--TRNAU1AP","ENSG00000162419","ENSG00000180098",4.0,1.0,1.0,1.0,0.905,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:SAMD13:84303287:+:1:PRKACB:84196616:+:rev","SAMD13--PRKACB","ENSG00000203943","ENSG00000142875",4.0,1.0,1.0,1.0,0.558,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","3:TOP2B:25612515:-:3:NGLY1:25733982:-:rev","TOP2B--NGLY1","ENSG00000077097","ENSG00000151092",1.0,1.0,1.0,1.0,0.966,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","4:PCGF3:744688:+:4:MYL5:680509:+:rev","PCGF3--MYL5","ENSG00000185619","ENSG00000215375",40.0,1.0,1.0,1.0,0.929425387910839,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","7:MKRN1:140471883:-:7:DENND2A:140546939:-:rev","MKRN1--DENND2A","ENSG00000133606","ENSG00000146966",31.0,1.0,1.0,1.0,0.85144730387318,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","9:NUP188:128947751:+:9:LRRC8A:128916096:+:rev","NUP188--LRRC8A","ENSG00000095319","ENSG00000136802",1.0,1.0,1.0,1.0,0.893,"NA"]
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["TCGA_BLCA","TCGA-DK-A6B5-01A","7:FSCN1:5593768:+:7:EIF2AK1:6026961:-:strandcross","FSCN1--EIF2AK1","ENSG00000075618","ENSG00000086232",441.0,1.0,2.0,1.0,0.602680953314725,0.00793650793651]
["TCGA_BLCA","TCGA-DK-A6B6-01A","15:COPS2:49155525:-:11:CTTN:70405265:+:fusion","COPS2--CTTN","ENSG00000166200","ENSG00000085733",5.0,1.0,1.0,1.0,0.862,0.0]
["TCGA_BLCA","TCGA-DK-AA6L-01A","8:PLPBP:37766355:+:1:ENO1:8865482:-:fusion","PLPBP--ENO1","ENSG00000147471","ENSG00000074800",3.0,5.0,3.0,2.0,0.638,0.0]
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["TCGA_BLCA","TCGA-DK-AA6P-01A","13:ELF1:41060838:-:13:UBL3:29777263:-:reg","ELF1--UBL3","ENSG00000120690","ENSG00000122042",26.0,1.0,1.0,1.0,0.907593298371538,0.013698630137]
["TCGA_BLCA","TCGA-DK-AA6P-01A","13:UBL3:29849512:-:13:CDK8:26337567:+:strandcross","UBL3--CDK8","ENSG00000122042","ENSG00000132964",4.0,1.0,1.0,1.0,0.572,0.0205479452055]
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["TCGA_BLCA","TCGA-DK-AA6P-01A","1:ARHGEF10L:17695280:+:1:PADI4:17341943:+:rev","ARHGEF10L--PADI4","ENSG00000074964","ENSG00000159339",7.0,1.0,1.0,1.0,0.796,"NA"]
["TCGA_BLCA","TCGA-DK-AA6P-01A","1:LGALS8:236544915:+:1:EDARADD:236482267:+:rev","LGALS8--EDARADD","ENSG00000116977","ENSG00000186197",2.0,1.0,1.0,1.0,0.439,"NA"]
["TCGA_BLCA","TCGA-DK-AA6P-01A","1:MAN1C1:25763967:+:1:TMEM50A:25360660:+:rev","MAN1C1--TMEM50A","ENSG00000117643","ENSG00000183726",11.0,1.0,1.0,1.0,0.832,"NA"]
["TCGA_BLCA","TCGA-DK-AA6Q-01A","8:GRHL2:101577519:+:8:AP001330.1:101293245:+:rev","GRHL2--AP001330.1","ENSG00000083307","ENSG00000253282",2.0,1.0,1.0,1.0,0.43,"NA"]
["TCGA_BLCA","TCGA-DK-AA6R-01A","18:RAB27B:54828700:+:18:WDR7:56879944:+:reg","RAB27B--WDR7","ENSG00000041353","ENSG00000091157",6.0,1.0,1.0,1.0,0.634,0.0123966942149]
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["TCGA_BLCA","TCGA-DK-AA6S-01A","6:ADGRF1:47020731:-:6:TNFRSF21:47286595:-:rev","ADGRF1--TNFRSF21","ENSG00000153292","ENSG00000146072",19.0,1.0,1.0,1.0,0.873676626747675,"NA"]
["TCGA_BLCA","TCGA-DK-AA6S-01A","6:ADGRF1:47021958:-:6:TNFRSF21:47286595:-:rev","ADGRF1--TNFRSF21","ENSG00000153292","ENSG00000146072",79.0,1.0,1.0,1.0,0.988928910498544,"NA"]
["TCGA_BLCA","TCGA-DK-AA6S-01A","6:DHX16:30662627:-:6:LINC00243:30798772:-:rev","DHX16--LINC00243","ENSG00000204560","ENSG00000214894",21.0,1.0,1.0,1.0,0.824365702539449,"NA"]
["TCGA_BLCA","TCGA-DK-AA6U-01A","17:ACOX1:75960215:-:X:PPP2R3B:361590:-:fusion","ACOX1--PPP2R3B","ENSG00000161533","ENSG00000167393",5.0,1.0,1.0,1.0,0.835,0.00425531914894]
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["TCGA_BLCA","TCGA-DK-AA6U-01A","19:ABHD8:17300856:-:2:ILKAP:238171024:-:fusion","ABHD8--ILKAP","ENSG00000127220","ENSG00000132323",12.0,1.0,1.0,1.0,0.597,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","19:URI1:29986417:+:6:SLC35F1:118275459:+:fusion","URI1--SLC35F1","ENSG00000105176","ENSG00000196376",11.0,1.0,1.0,1.0,0.976,0.0]
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["TCGA_BLCA","TCGA-DK-AA6U-01A","2:ROCK2:11286539:-:2:AC013460.1:7445880:+:strandcross","ROCK2--AC013460.1","ENSG00000134318","ENSG00000229727",2.0,1.0,1.0,1.0,0.811,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","2:UBE2F-SCLY:238032254:+:2:LINC01934:181322661:+:rev","UBE2F-SCLY--LINC01934","ENSG00000184182","ENSG00000234663",2.0,1.0,1.0,1.0,0.797,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:CDKAL1:20535394:+:12:AC022081.1:28822273:-:fusion","CDKAL1--AC022081.1","ENSG00000145996","ENSG00000256513",3.0,1.0,1.0,1.0,0.157,0.0425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:CDKAL1:20535394:+:6:DNAH8:38882910:+:reg","CDKAL1--DNAH8","ENSG00000145996","ENSG00000124721",33.0,1.0,1.0,1.0,0.911596343497734,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:ZFAND3:37820016:+:19:AC006504.5:27900789:+:fusion","ZFAND3--AC006504.5","ENSG00000156639","ENSG00000267575",4.0,1.0,1.0,1.0,0.892,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:ZFAND3:37929999:+:19:URI1:29985223:+:fusion","ZFAND3--URI1","ENSG00000156639","ENSG00000105176",2.0,1.0,1.0,1.0,0.692,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47291137:+:1:AL390729.1:112877730:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",7.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47294030:+:1:AL390729.1:112876940:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",7.0,1.0,1.0,1.0,0.734,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47294030:+:1:AL390729.1:112877730:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",21.0,1.0,1.0,1.0,0.886204930407888,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6W-01A","3:QTRT2:114057106:+:3:NAA50:113721937:-:strandcross","QTRT2--NAA50","ENSG00000151576","ENSG00000121579",2.0,1.0,1.0,1.0,0.694,0.0106951871658]
["TCGA_BLCA","TCGA-DK-AA6W-01A","7:ZNF727:64045624:+:7:VPS50:93271220:+:reg","ZNF727--VPS50","ENSG00000214652","ENSG00000004766",3.0,1.0,1.0,1.0,0.73,0.0106951871658]
["TCGA_BLCA","TCGA-DK-AA6W-01A","9:ERCC6L2:95928864:+:9:PTPRD:9018735:-:strandcross","ERCC6L2--PTPRD","ENSG00000182150","ENSG00000153707",6.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_BLCA","TCGA-DK-AA6W-01A","15:GABPB1:50346372:-:15:TRPM7:50586488:-:rev","GABPB1--TRPM7","ENSG00000104064","ENSG00000092439",1.0,1.0,1.0,1.0,0.813,"NA"]
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["TCGA_BLCA","TCGA-DK-AA6W-01A","19:UPF1:18853071:+:19:CRTC1:18753500:+:rev","UPF1--CRTC1","ENSG00000005007","ENSG00000105662",18.0,1.0,1.0,1.0,0.798330249242792,"NA"]
["TCGA_BLCA","TCGA-DK-AA6X-01A","17:NF1:31169997:+:17:SPACA3:32996843:+:reg","NF1--SPACA3","ENSG00000196712","ENSG00000141316",16.0,1.0,1.0,1.0,0.873504568964588,0.0]
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["TCGA_BLCA","TCGA-DK-AA75-01A","11:PACS1:66070842:+:1:STPG1:24361041:-:fusion","PACS1--STPG1","ENSG00000175115","ENSG00000001460",8.0,1.0,1.0,1.0,0.932,0.00480769230769]
["TCGA_BLCA","TCGA-DK-AA75-01A","12:CCT2:69586344:+:12:CPM:68842329:-:strandcross","CCT2--CPM","ENSG00000166226","ENSG00000135678",4.0,1.0,1.0,1.0,0.877,0.00480769230769]
["TCGA_BLCA","TCGA-DK-AA75-01A","12:KCNMB4:70367070:+:12:MSRB3:65488004:+:rev","KCNMB4--MSRB3","ENSG00000135643","ENSG00000174099",53.0,1.0,1.0,1.0,0.767516252972766,0.00480769230769]
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["TCGA_BLCA","TCGA-DK-AA75-01A","1:XPR1:180682411:+:1:DEDD:161124526:-:strandcross","XPR1--DEDD","ENSG00000143324","ENSG00000158796",6.0,1.0,1.0,1.0,0.929,0.00480769230769]
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["TCGA_BLCA","TCGA-DK-AA75-01A","13:RAB20:110561348:-:13:CARS2:110647239:-:rev","RAB20--CARS2","ENSG00000139832","ENSG00000134905",1.0,1.0,2.0,1.0,0.957,"NA"]
["TCGA_BLCA","TCGA-DK-AA75-01A","3:PPARG:12288020:+:3:SYN2:12145679:+:rev","PPARG--SYN2","ENSG00000132170","ENSG00000157152",4.0,1.0,1.0,1.0,0.848,"NA"]
["TCGA_BLCA","TCGA-DK-AA76-01A","10:LCOR:96907747:+:17:MAP2K6:69524901:+:fusion","LCOR--MAP2K6","ENSG00000196233","ENSG00000108984",7.0,1.0,1.0,1.0,0.863,0.00602409638554]
["TCGA_BLCA","TCGA-DK-AA77-01A","2:RHOQ:46543812:+:2:AC106869.1:47192817:-:strandcross","RHOQ--AC106869.1","ENSG00000119729","ENSG00000234690",12.0,1.0,1.0,1.0,0.469,0.00719424460432]
["TCGA_BLCA","TCGA-DK-AA77-01A","2:RHOQ:46543812:+:2:AC106869.1:47221323:-:strandcross","RHOQ--AC106869.1","ENSG00000119729","ENSG00000234690",11.0,1.0,1.0,1.0,0.439,0.00719424460432]
["TCGA_BLCA","TCGA-DK-AA77-01A","4:AP002026.1:99204427:+:4:CENPE:103111011:-:strandcross","AP002026.1--CENPE","ENSG00000246090","ENSG00000138778",4.0,1.0,1.0,1.0,0.691,0.00359712230216]
["TCGA_BLCA","TCGA-DK-AA77-01A","4:AP002026.1:99204431:+:4:CENPE:103111011:-:strandcross","AP002026.1--CENPE","ENSG00000246090","ENSG00000138778",5.0,1.0,1.0,1.0,0.582,0.00719424460432]
["TCGA_BLCA","TCGA-E5-A2PC-01A","13:KPNA3:49746949:-:4:FGF2:122876321:+:fusion","KPNA3--FGF2","ENSG00000102753","ENSG00000138685",76.0,1.0,1.0,1.0,0.892657420999713,0.00248756218905]
["TCGA_BLCA","TCGA-E5-A2PC-01A","5:NUP155:37314198:-:5:TRIO:14531744:+:strandcross","NUP155--TRIO","ENSG00000113569","ENSG00000038382",39.0,1.0,1.0,1.0,0.951717201752577,0.00248756218905]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","16:FBXO31:87360295:-:16:ZNRF1:75093572:+:strandcross","FBXO31--ZNRF1","ENSG00000103264","ENSG00000186187",23.0,1.0,1.0,1.0,0.497517404042828,0.00952380952381]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","16:XPO6:28211366:-:16:FBXO31:87360366:-:rev","XPO6--FBXO31","ENSG00000169180","ENSG00000103264",14.0,1.0,1.0,1.0,0.392,0.00952380952381]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","1:POGZ:151440928:-:5:POC5:75694831:-:fusion","POGZ--POC5","ENSG00000143442","ENSG00000152359",3.0,1.0,1.0,1.0,0.889,0.0]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","8:SAMD12:118580715:-:8:PKIA-AS1:78430948:-:reg","SAMD12--PKIA-AS1","ENSG00000177570","ENSG00000254266",1.0,1.0,1.0,1.0,0.756,0.00238095238095]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","4:RNF4:2500738:+:4:CFAP99:2436874:+:rev","RNF4--CFAP99","ENSG00000063978","ENSG00000206113",22.0,1.0,1.0,1.0,0.905749536334039,"NA"]
["TCGA_BLCA","TCGA-E5-A4U1-01A","11:RSF1:77820528:-:11:CPT1A:68815487:-:reg","RSF1--CPT1A","ENSG00000048649","ENSG00000110090",2.0,1.0,1.0,1.0,0.924,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","11:TENM4:79064738:-:11:AP003086.2:78443648:+:strandcross","TENM4--AP003086.2","ENSG00000149256","ENSG00000254420",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","18:DSG2:31524888:+:18:AC117569.1:29547995:+:rev","DSG2--AC117569.1","ENSG00000046604","ENSG00000264587",6.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","19:KHSRP:6415808:-:11:AP000439.1:69438853:-:fusion","KHSRP--AP000439.1","ENSG00000088247","ENSG00000255606",7.0,1.0,1.0,1.0,0.784,0.0]
["TCGA_BLCA","TCGA-E7-A3X6-01A","15:ALDH1A2:58331179:-:15:ADAM10:58665197:-:rev","ALDH1A2--ADAM10","ENSG00000128918","ENSG00000137845",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","19:NFIX:12995864:+:22:CRYBB3:25201377:+:fusion","NFIX--CRYBB3","ENSG00000008441","ENSG00000100053",14.0,1.0,1.0,1.0,0.688,0.0]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","22:TTC28:28163092:-:2:ARHGAP15:143767989:+:fusion","TTC28--ARHGAP15","ENSG00000100154","ENSG00000075884",4.0,1.0,1.0,1.0,0.747,0.0]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","6:PPP2R5D:42989688:+:6:AL035587.1:42943798:+:rev","PPP2R5D--AL035587.1","ENSG00000112640","ENSG00000231113",10.0,1.0,1.0,1.0,0.691,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","7:AC019117.1:17465170:-:7:SNX13:17803580:-:rev","AC019117.1--SNX13","ENSG00000236039","ENSG00000071189",2.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","7:RNF216:5781541:-:7:PMS2:5982991:-:rev","RNF216--PMS2","ENSG00000011275","ENSG00000122512",2.0,1.0,1.0,1.0,0.933,"NA"]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","1:KDM5B:202748945:-:8:PVT1:127855155:+:fusion","KDM5B--PVT1","ENSG00000117139","ENSG00000249859",3.0,1.0,1.0,1.0,0.906,0.0]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","1:KDM5B:202748945:-:8:PVT1:127890589:+:fusion","KDM5B--PVT1","ENSG00000117139","ENSG00000249859",8.0,1.0,1.0,1.0,0.838,0.0]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","8:PVT1:127794734:+:8:FLJ42969:101054498:+:rev","PVT1--FLJ42969","ENSG00000249859","ENSG00000248599",7.0,1.0,1.0,1.0,0.821,0.0]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","8:SNX31:100596639:-:8:SPAG1:100259042:+:strandcross","SNX31--SPAG1","ENSG00000174226","ENSG00000104450",30.0,1.0,1.0,1.0,0.738244012330428,0.0]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","8:SNX31:100600349:-:8:SPAG1:100259042:+:strandcross","SNX31--SPAG1","ENSG00000174226","ENSG00000104450",7.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","9:FUBP3:130579764:+:2:EIF4E2:232564247:+:fusion","FUBP3--EIF4E2","ENSG00000107164","ENSG00000135930",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-E7-A519-01A","15:RPLP1:69453020:+:11:TNNI2:1840403:+:fusion","RPLP1--TNNI2","ENSG00000137818","ENSG00000130598",2.0,1.0,1.0,1.0,0.617,0.0]
["TCGA_BLCA","TCGA-E7-A541-01A","1:NOS1AP:162154476:+:6:AHI1:135358187:-:fusion","NOS1AP--AHI1","ENSG00000198929","ENSG00000135541",3.0,1.0,1.0,1.0,0.988,0.00242130750605]
["TCGA_BLCA","TCGA-E7-A541-01A","1:OSBPL9:51714079:+:12:CERS5:50144057:-:fusion","OSBPL9--CERS5","ENSG00000117859","ENSG00000139624",3.0,1.0,1.0,1.0,0.373,0.0121065375303]
["TCGA_BLCA","TCGA-E7-A541-01A","2:UGGT1:128129179:+:2:AC009303.2:118012494:+:rev","UGGT1--AC009303.2","ENSG00000136731","ENSG00000235066",9.0,1.0,1.0,1.0,0.438,0.0121065375303]
["TCGA_BLCA","TCGA-E7-A541-01A","6:ARFGEF3:138313939:+:6:LINC01277:142967441:-:strandcross","ARFGEF3--LINC01277","ENSG00000112379","ENSG00000229017",4.0,1.0,1.0,1.0,0.602,0.00726392251816]
["TCGA_BLCA","TCGA-E7-A541-01A","6:HBS1L:135050582:-:2:GPAT2:96032419:-:fusion","HBS1L--GPAT2","ENSG00000112339","ENSG00000186281",6.0,1.0,1.0,1.0,0.893,0.00242130750605]
["TCGA_BLCA","TCGA-E7-A541-01A","22:MYH9:36341370:-:22:FOXRED2:36498156:-:rev","MYH9--FOXRED2","ENSG00000100345","ENSG00000100350",5.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","17:CASC3:40141607:+:19:SIPA1L3:38206097:+:fusion","CASC3--SIPA1L3","ENSG00000108349","ENSG00000105738",6.0,1.0,1.0,1.0,0.452,0.0116279069767]
["TCGA_BLCA","TCGA-E7-A5KE-01A","17:LLGL2:75525825:+:17:EXOC7:76087720:-:strandcross","LLGL2--EXOC7","ENSG00000073350","ENSG00000182473",8.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_BLCA","TCGA-E7-A5KE-01A","10:SH3PXD2A:103855195:-:10:STN1:103910622:-:rev","SH3PXD2A--STN1","ENSG00000107957","ENSG00000107960",1.0,3.0,3.0,3.0,0.941,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","10:USP6NL:11597631:-:10:UPF2:11936712:-:rev","USP6NL--UPF2","ENSG00000148429","ENSG00000151461",1.0,1.0,2.0,1.0,0.935,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","11:AMBRA1:46593828:-:11:CKAP5:46784673:-:rev","AMBRA1--CKAP5","ENSG00000110497","ENSG00000175216",2.0,1.0,1.0,1.0,0.897,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","22:PPP6R2:50372150:+:22:SELENOO:50215717:+:rev","PPP6R2--SELENOO","ENSG00000100239","ENSG00000073169",19.0,1.0,1.0,1.0,0.878754316405073,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","2:TBC1D8:101090254:-:2:CREG2:101355366:-:rev","TBC1D8--CREG2","ENSG00000204634","ENSG00000175874",2.0,2.0,1.0,1.0,0.537,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","3:PPARG:12288020:+:3:SYN2:12187369:+:rev","PPARG--SYN2","ENSG00000132170","ENSG00000157152",17.0,1.0,1.0,1.0,0.788906247267692,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","3:PPARG:12289134:+:3:SYN2:12187369:+:rev","PPARG--SYN2","ENSG00000132170","ENSG00000157152",60.0,1.0,1.0,1.0,0.970116220515682,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","4:FGFR3:1806934:+:4:TACC3:1739702:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",757.0,22.0,17.0,17.0,0.999906031005624,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","7:CYTH3:6272474:-:7:KDELR2:6466323:-:rev","CYTH3--KDELR2","ENSG00000008256","ENSG00000136240",4.0,1.0,1.0,1.0,0.979,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","7:IGFBP3:45920738:-:7:AC004870.4:46890780:-:rev","IGFBP3--AC004870.4","ENSG00000146674","ENSG00000232072",22.0,1.0,1.0,1.0,0.557288967379308,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","8:SNX31:100596639:-:8:PABPC1:100712457:-:rev","SNX31--PABPC1","ENSG00000174226","ENSG00000070756",3.0,1.0,1.0,1.0,0.844,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","8:SNX31:100596639:-:8:PABPC1:100712789:-:rev","SNX31--PABPC1","ENSG00000174226","ENSG00000070756",13.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-E7-A6MD-01A","20:EPB41L1:36178672:+:18:RBBP8:22911600:+:fusion","EPB41L1--RBBP8","ENSG00000088367","ENSG00000101773",6.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-E7-A6MD-01A","9:CDKN2A:21974678:-:1:CAPZB:19345252:-:fusion","CDKN2A--CAPZB","ENSG00000147889","ENSG00000077549",144.0,1.0,1.0,1.0,0.940566474809435,0.00348432055749]
["TCGA_BLCA","TCGA-E7-A6MD-01A","9:CDKN2A:21994139:-:1:CAPZB:19345252:-:fusion","CDKN2A--CAPZB","ENSG00000147889","ENSG00000077549",9.0,1.0,1.0,1.0,0.483,0.0104529616725]
["TCGA_BLCA","TCGA-E7-A6MD-01A","9:CDKN2A:21994821:-:1:CAPZB:19345252:-:fusion","CDKN2A--CAPZB","ENSG00000147889","ENSG00000077549",2.0,1.0,1.0,1.0,0.606,0.0104529616725]
["TCGA_BLCA","TCGA-E7-A6ME-01A","16:EEF2K:22251322:+:16:LCMT1-AS1:25085772:-:strandcross","EEF2K--LCMT1-AS1","ENSG00000103319","ENSG00000260448",5.0,1.0,1.0,1.0,0.227,0.0229226361032]
["TCGA_BLCA","TCGA-E7-A6ME-01A","17:MFSD11:76742273:+:17:PRCD:76553109:+:rev","MFSD11--PRCD","ENSG00000092931","ENSG00000214140",1.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_BLCA","TCGA-E7-A7DU-01A","8:PVT1:127794734:+:8:EIF3E:108203503:-:strandcross","PVT1--EIF3E","ENSG00000249859","ENSG00000104408",3.0,3.0,1.0,1.0,0.476,0.00862068965517]
["TCGA_BLCA","TCGA-E7-A7DV-01A","11:TMEM123:102448812:-:9:CENPP:92611314:+:fusion","TMEM123--CENPP","ENSG00000152558","ENSG00000188312",45.0,1.0,1.0,1.0,0.91883582858503,0.0]
["TCGA_BLCA","TCGA-E7-A7DV-01A","12:TMEM117:43844928:+:12:STAT2:56356578:-:strandcross","TMEM117--STAT2","ENSG00000139173","ENSG00000170581",1.0,1.0,1.0,1.0,0.685,0.00314465408805]
["TCGA_BLCA","TCGA-E7-A7DV-01A","21:NRIP1:15064745:-:21:C21orf91:17793581:-:rev","NRIP1--C21orf91","ENSG00000180530","ENSG00000154642",2.0,1.0,1.0,1.0,0.789,0.00157232704403]
["TCGA_BLCA","TCGA-E7-A7DV-01A","3:HRH1:11154554:+:3:TSEN2:12489784:+:reg","HRH1--TSEN2","ENSG00000196639","ENSG00000154743",2.0,1.0,1.0,1.0,0.794,0.00157232704403]
["TCGA_BLCA","TCGA-E7-A7DV-01A","3:RFTN1:16513442:-:3:TMEM40:12749840:-:reg","RFTN1--TMEM40","ENSG00000131378","ENSG00000088726",27.0,1.0,1.0,1.0,0.847951526102213,0.0]
["TCGA_BLCA","TCGA-E7-A7DV-01A","8:FAM49B:129903312:-:8:MRPL13:120432123:-:reg","FAM49B--MRPL13","ENSG00000153310","ENSG00000172172",4.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_BLCA","TCGA-E7-A7DV-01A","8:FAM49B:129903312:-:8:MRPL13:120443308:-:reg","FAM49B--MRPL13","ENSG00000153310","ENSG00000172172",8.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_BLCA","TCGA-E7-A7DV-01A","9:ZCCHC7:37126942:+:9:PTPDC1:94064734:+:reg","ZCCHC7--PTPDC1","ENSG00000147905","ENSG00000158079",4.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:CPSF6:69239706:+:6:CDKAL1:20846075:+:fusion","CPSF6--CDKAL1","ENSG00000111605","ENSG00000145996",2.0,1.0,1.0,1.0,0.711,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:FRS2:69532056:+:6:AL512380.2:21539024:-:fusion","FRS2--AL512380.2","ENSG00000166225","ENSG00000283480",7.0,1.0,1.0,1.0,0.531,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:FRS2:69537983:+:6:AL512380.2:21539024:-:fusion","FRS2--AL512380.2","ENSG00000166225","ENSG00000283480",4.0,1.0,1.0,1.0,0.749,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",3.0,44.0,40.0,34.0,0.981,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","6:CDKAL1:20548705:+:6:AL158198.1:20317551:+:rev","CDKAL1--AL158198.1","ENSG00000145996","ENSG00000227803",75.0,1.0,1.0,1.0,0.957678437815875,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","11:DPP3:66493633:+:1:SPATA6:48453131:-:fusion","DPP3--SPATA6","ENSG00000254986","ENSG00000132122",5.0,1.0,1.0,1.0,0.388,0.011811023622]
["TCGA_BLCA","TCGA-E7-A85H-01A","11:PPME1:74204445:+:11:YIF1A:66287676:-:strandcross","PPME1--YIF1A","ENSG00000214517","ENSG00000174851",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-E7-A85H-01A","13:LRCH1:46669156:+:13:LINC01034:76013156:-:strandcross","LRCH1--LINC01034","ENSG00000136141","ENSG00000224933",10.0,1.0,1.0,1.0,0.709,0.00787401574803]
["TCGA_BLCA","TCGA-E7-A85H-01A","13:PSPC1:19730239:-:3:ACTR8:53880109:-:fusion","PSPC1--ACTR8","ENSG00000121390","ENSG00000113812",14.0,1.0,1.0,1.0,0.486,0.00787401574803]
["TCGA_BLCA","TCGA-E7-A85H-01A","1:ENSA:150627467:-:1:RPRD2:150457288:+:strandcross","ENSA--RPRD2","ENSG00000143420","ENSG00000163125",9.0,1.0,1.0,1.0,0.169,0.0314960629921]
["TCGA_BLCA","TCGA-E7-A85H-01A","7:UBE3C:157225539:+:1:FAF1:50596216:-:fusion","UBE3C--FAF1","ENSG00000009335","ENSG00000185104",4.0,1.0,1.0,1.0,0.872,0.0]
["TCGA_BLCA","TCGA-E7-A85H-01A","8:NBN:89964410:-:8:RIPK2:89784050:+:strandcross","NBN--RIPK2","ENSG00000104320","ENSG00000104312",4.0,1.0,1.0,1.0,0.833,0.0]
["TCGA_BLCA","TCGA-E7-A85H-01A","11:TEAD1:12764434:+:11:PARVA:12527849:+:rev","TEAD1--PARVA","ENSG00000187079","ENSG00000197702",5.0,1.0,1.0,1.0,0.486,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","12:AAAS:53314298:-:12:ATP5G2:53633066:-:rev","AAAS--ATP5G2","ENSG00000094914","ENSG00000135390",12.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","12:FRS2:69470530:+:12:LINC02373:69459517:+:rev","FRS2--LINC02373","ENSG00000166225","ENSG00000257507",5.0,2.0,1.0,1.0,0.709,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","14:DHRS2:23636772:+:14:IL25:23375625:+:rev","DHRS2--IL25","ENSG00000100867","ENSG00000166090",8.0,1.0,1.0,1.0,0.694,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","14:DHRS2:23639356:+:14:IL25:23375625:+:rev","DHRS2--IL25","ENSG00000100867","ENSG00000166090",5.0,1.0,1.0,1.0,0.409,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","14:DHRS2:23639895:+:14:IL25:23375625:+:rev","DHRS2--IL25","ENSG00000100867","ENSG00000166090",202.0,1.0,1.0,1.0,0.637558295297337,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","15:RAB27A:55270165:-:15:DNAAF4:55439581:-:rev","RAB27A--DNAAF4","ENSG00000069974","ENSG00000261771",2.0,1.0,1.0,1.0,0.98,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","19:SCAMP4:1905439:+:19:DAZAP1:1417500:+:rev","SCAMP4--DAZAP1","ENSG00000227500","ENSG00000071626",19.0,2.0,3.0,2.0,0.874002174671748,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","5:ANXA6:151103570:-:5:ATOX1:151742959:-:rev","ANXA6--ATOX1","ENSG00000197043","ENSG00000177556",2.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","5:PLPP1:55534572:-:5:SLC38A9:55697992:-:rev","PLPP1--SLC38A9","ENSG00000067113","ENSG00000177058",4.0,2.0,3.0,2.0,0.859,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","8:NDUFAF6:94958179:+:8:INTS8:94873374:+:rev","NDUFAF6--INTS8","ENSG00000156170","ENSG00000164941",2.0,1.0,1.0,1.0,0.416,"NA"]
["TCGA_BLCA","TCGA-E7-A8O7-01A","13:DLEU2:50125302:-:13:DIAPH3-AS1:60020921:+:strandcross","DLEU2--DIAPH3-AS1","ENSG00000231607","ENSG00000227528",21.0,1.0,1.0,1.0,0.880594544641553,0.00531914893617]
["TCGA_BLCA","TCGA-E7-A97Q-01A","17:NUP85:75213119:+:1:AL353708.2:179926896:-:fusion","NUP85--AL353708.2","ENSG00000125450","ENSG00000261831",7.0,1.0,1.0,1.0,0.599,0.0134529147982]
["TCGA_BLCA","TCGA-E7-A97Q-01A","17:PSMB3:38753334:+:3:KIAA1257:128910333:-:fusion","PSMB3--KIAA1257","ENSG00000277791","ENSG00000114656",44.0,1.0,1.0,1.0,0.836159295412096,0.0134529147982]
["TCGA_BLCA","TCGA-E7-A97Q-01A","19:ZNF586:57769878:+:19:AC010326.2:57889008:-:strandcross","ZNF586--AC010326.2","ENSG00000083828","ENSG00000269476",4.0,1.0,1.0,1.0,0.867,0.00896860986547]
["TCGA_BLCA","TCGA-E7-A97Q-01A","2:LIMS1:108534594:+:2:AC017002.2:111611902:+:reg","LIMS1--AC017002.2","ENSG00000169756","ENSG00000225744",14.0,1.0,1.0,1.0,0.464,0.0179372197309]
["TCGA_BLCA","TCGA-E7-A97Q-01A","7:RBM28:128314764:-:7:KMT2C:152185631:-:rev","RBM28--KMT2C","ENSG00000106344","ENSG00000055609",4.0,1.0,1.0,1.0,0.928,0.0]
["TCGA_BLCA","TCGA-E7-A97Q-01A","6:LRRC1:53842227:+:6:AL033397.2:53506154:+:rev","LRRC1--AL033397.2","ENSG00000137269","ENSG00000249379",3.0,1.0,1.0,1.0,0.571,"NA"]
["TCGA_BLCA","TCGA-FD-A3B3-01A","10:GDI2:5813214:-:19:ZNF526:42224215:+:fusion","GDI2--ZNF526","ENSG00000057608","ENSG00000167625",7.0,1.0,1.0,1.0,0.934,0.00302571860817]
["TCGA_BLCA","TCGA-FD-A3B3-01A","10:PFKP:3067707:+:19:PSG1:42868355:-:fusion","PFKP--PSG1","ENSG00000067057","ENSG00000231924",9.0,1.0,1.0,1.0,0.682,0.00453857791225]
["TCGA_BLCA","TCGA-FD-A3B3-01A","14:ARID4A:58347878:+:14:AL121694.1:59479351:-:strandcross","ARID4A--AL121694.1","ENSG00000032219","ENSG00000126790",2.0,1.0,1.0,1.0,0.745,0.00453857791225]
["TCGA_BLCA","TCGA-FD-A3B3-01A","14:DHRS4:23953916:+:14:SCFD1:30633947:+:reg","DHRS4--SCFD1","ENSG00000157326","ENSG00000092108",3.0,1.0,1.0,1.0,0.964,0.00151285930408]
["TCGA_BLCA","TCGA-FD-A3B3-01A","8:ASH2L:38110833:+:8:FAM110B:58197831:+:reg","ASH2L--FAM110B","ENSG00000129691","ENSG00000169122",12.0,1.0,1.0,1.0,0.171,0.0620272314675]
["TCGA_BLCA","TCGA-FD-A3B3-01A","8:NRG1:32616885:+:8:AC100818.1:35944244:+:reg","NRG1--AC100818.1","ENSG00000157168","ENSG00000253452",3.0,1.0,1.0,1.0,0.215,0.0302571860817]
["TCGA_BLCA","TCGA-FD-A3B3-01A","8:NRG1:32616885:+:8:AC100818.1:35970613:+:reg","NRG1--AC100818.1","ENSG00000157168","ENSG00000253452",4.0,1.0,1.0,1.0,0.954,0.00151285930408]
["TCGA_BLCA","TCGA-FD-A3B3-01A","1:FAF1:50857929:-:1:EPS15:51448135:-:rev","FAF1--EPS15","ENSG00000185104","ENSG00000085832",2.0,1.0,1.0,1.0,0.988,"NA"]
["TCGA_BLCA","TCGA-FD-A3B5-01A","11:UNC93B1:68003022:-:X:GTPBP6:315020:-:fusion","UNC93B1--GTPBP6","ENSG00000110057","ENSG00000178605",10.0,1.0,1.0,1.0,0.616,0.00831600831601]
["TCGA_BLCA","TCGA-FD-A3B6-01A","10:MICU1:72475100:-:10:NRG3:82232742:+:strandcross","MICU1--NRG3","ENSG00000107745","ENSG00000185737",2.0,1.0,1.0,1.0,0.198,0.0167364016736]
["TCGA_BLCA","TCGA-FD-A3B6-01A","10:MICU1:72475100:-:10:NRG3:82358739:+:strandcross","MICU1--NRG3","ENSG00000107745","ENSG00000185737",4.0,1.0,1.0,1.0,0.253,0.0167364016736]
["TCGA_BLCA","TCGA-FD-A3B6-01A","17:ADORA2B:15945583:+:22:SYN3:32596736:-:fusion","ADORA2B--SYN3","ENSG00000170425","ENSG00000185666",18.0,1.0,1.0,1.0,0.864556535318607,0.0]
["TCGA_BLCA","TCGA-FD-A3B6-01A","22:TIMP3:32802122:+:22:SYN3:32629868:-:strandcross","TIMP3--SYN3","ENSG00000100234","ENSG00000185666",30.0,1.0,1.0,1.0,0.926038252128965,0.0]
["TCGA_BLCA","TCGA-FD-A3B6-01A","7:DNAAF5:729847:+:22:ZNRF3:29046716:+:fusion","DNAAF5--ZNRF3","ENSG00000164818","ENSG00000183579",2.0,1.0,1.0,1.0,0.922,0.0]
["TCGA_BLCA","TCGA-FD-A3B6-01A","16:IQCK:19730494:+:16:C16orf62:19700378:+:rev","IQCK--C16orf62","ENSG00000174628","ENSG00000103544",2.0,1.0,1.0,1.0,0.785,"NA"]
["TCGA_BLCA","TCGA-FD-A3B7-01A","1:NBPF19:149390922:+:1:CTSS:150752008:-:strandcross","NBPF19--CTSS","ENSG00000271383","ENSG00000163131",2.0,1.0,1.0,1.0,0.902,0.0]
["TCGA_BLCA","TCGA-FD-A3B7-01A","4:SMARCA5:143548140:+:4:LRBA:150436864:-:strandcross","SMARCA5--LRBA","ENSG00000153147","ENSG00000198589",9.0,1.0,1.0,1.0,0.915,0.0]
["TCGA_BLCA","TCGA-FD-A3B7-01A","3:TRAK1:42125614:+:3:CTNNB1:41224021:+:rev","TRAK1--CTNNB1","ENSG00000182606","ENSG00000168036",1.0,2.0,3.0,2.0,0.919,"NA"]
["TCGA_BLCA","TCGA-FD-A3B8-01A","20:KIF16B:16494291:-:20:RRBP1:17660528:-:rev","KIF16B--RRBP1","ENSG00000089177","ENSG00000125844",4.0,1.0,1.0,1.0,0.459,0.00947867298578]
["TCGA_BLCA","TCGA-FD-A3B8-01A","3:ARIH2:48918998:+:3:RHOA:49375591:-:strandcross","ARIH2--RHOA","ENSG00000177479","ENSG00000067560",2.0,1.0,1.0,1.0,0.735,0.00277777777778]
["TCGA_BLCA","TCGA-FD-A3B8-01A","3:SEC61A1:128060661:+:5:CCT5:10254674:+:fusion","SEC61A1--CCT5","ENSG00000058262","ENSG00000150753",5.0,1.0,1.0,1.0,0.98,0.0]
["TCGA_BLCA","TCGA-FD-A3B8-01A","4:ARHGAP10:147881932:+:4:TMEM184C:147671867:+:rev","ARHGAP10--TMEM184C","ENSG00000071205","ENSG00000164168",3.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_BLCA","TCGA-FD-A3N5-01A","7:EGFR:55019365:+:6:AARS2:44312263:-:fusion","EGFR--AARS2","ENSG00000146648","ENSG00000124608",4.0,1.0,1.0,1.0,0.492,0.00879120879121]
["TCGA_BLCA","TCGA-FD-A3N5-01A","7:EXOC4:133817544:+:7:AC078845.1:136242150:+:reg","EXOC4--AC078845.1","ENSG00000131558","ENSG00000232053",9.0,1.0,1.0,1.0,0.672,0.0043956043956]
["TCGA_BLCA","TCGA-FD-A3NA-01A","8:STK3:98825515:-:8:ZNF706:101201743:-:rev","STK3--ZNF706","ENSG00000104375","ENSG00000120963",13.0,1.0,1.0,1.0,0.397,0.012539184953]
["TCGA_BLCA","TCGA-FD-A3NA-01A","10:FBXL15:102422292:+:10:GBF1:102369211:+:rev","FBXL15--GBF1","ENSG00000107872","ENSG00000107862",2.0,1.0,1.0,1.0,0.714,"NA"]
["TCGA_BLCA","TCGA-FD-A3NA-01A","17:HEATR6:60055515:-:17:AC025048.1:60136227:-:rev","HEATR6--AC025048.1","ENSG00000068097","ENSG00000267095",3.0,1.0,1.0,1.0,0.692,"NA"]
["TCGA_BLCA","TCGA-FD-A3NA-01A","1:SCCPDH:246744125:+:1:CNST:246647139:+:rev","SCCPDH--CNST","ENSG00000143653","ENSG00000162852",4.0,1.0,1.0,1.0,0.59,"NA"]
["TCGA_BLCA","TCGA-FD-A3NA-01A","8:RNF19A:100309867:-:8:AP003472.1:100381771:-:rev","RNF19A--AP003472.1","ENSG00000034677","ENSG00000253824",22.0,3.0,3.0,3.0,0.64693192076907,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","10:HERC4:68032778:-:6:CDKAL1:21000227:+:fusion","HERC4--CDKAL1","ENSG00000148634","ENSG00000145996",12.0,1.0,1.0,1.0,0.489,0.00485436893204]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","12:AC008014.1:46387972:+:7:AC073486.1:125461481:+:fusion","AC008014.1--AC073486.1","ENSG00000257261","ENSG00000227869",2.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","13:ARHGEF7:111244294:+:8:KLF10:102652397:-:fusion","ARHGEF7--KLF10","ENSG00000102606","ENSG00000155090",2.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","17:MLLT6:38712014:+:17:AC243585.1:37650555:+:rev","MLLT6--AC243585.1","ENSG00000275023","ENSG00000274244",11.0,1.0,1.0,1.0,0.769,0.00242718446602]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","19:ZNF331:53539282:+:19:ZNF793:37520184:+:rev","ZNF331--ZNF793","ENSG00000130844","ENSG00000188227",5.0,1.0,1.0,1.0,0.364,0.00485436893204]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","1:C1orf116:207032579:-:1:LIN9:226250919:-:rev","C1orf116--LIN9","ENSG00000182795","ENSG00000183814",2.0,1.0,1.0,1.0,0.815,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","1:PRRC2C:171588505:+:19:NLRP8:55973652:+:fusion","PRRC2C--NLRP8","ENSG00000117523","ENSG00000179709",3.0,1.0,1.0,1.0,0.866,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","1:YIPF1:53882943:-:8:MRPL15:54147382:+:fusion","YIPF1--MRPL15","ENSG00000058799","ENSG00000137547",3.0,1.0,1.0,1.0,0.723,0.00242718446602]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","1:YIPF1:53883113:-:8:MRPL15:54147382:+:fusion","YIPF1--MRPL15","ENSG00000058799","ENSG00000137547",11.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","2:ACOXL:111092966:+:8:UNC5D:35549292:+:fusion","ACOXL--UNC5D","ENSG00000153093","ENSG00000156687",5.0,1.0,1.0,1.0,0.718,0.00242718446602]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","2:ADGRF3:26345711:-:2:IFT172:27465882:-:rev","ADGRF3--IFT172","ENSG00000173567","ENSG00000138002",2.0,1.0,1.0,1.0,0.32,0.00728155339806]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","3:TSC22D2:150411308:+:3:FGF12:192170656:-:strandcross","TSC22D2--FGF12","ENSG00000196428","ENSG00000114279",2.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","4:FBXW7:152534941:-:6:AL023655.1:18535848:+:fusion","FBXW7--AL023655.1","ENSG00000109670","ENSG00000283408",6.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","5:PFDN1:140281449:-:6:LINC00581:21486529:-:fusion","PFDN1--LINC00581","ENSG00000113068","ENSG00000280989",3.0,1.0,1.0,1.0,0.367,0.00485436893204]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","5:PFDN1:140281449:-:6:LINC00581:21502511:-:fusion","PFDN1--LINC00581","ENSG00000113068","ENSG00000280989",2.0,1.0,1.0,1.0,0.222,0.00970873786408]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","6:CASC15:22020542:+:6:MBOAT1:20152769:-:strandcross","CASC15--MBOAT1","ENSG00000272168","ENSG00000172197",12.0,1.0,1.0,1.0,0.818,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","8:ATP6V1C1:103042407:+:8:AC117834.1:92921416:+:rev","ATP6V1C1--AC117834.1","ENSG00000155097","ENSG00000253197",5.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","X:POLA1:24930549:+:X:CXorf58:23910283:+:rev","POLA1--CXorf58","ENSG00000101868","ENSG00000165182",5.0,1.0,1.0,1.0,0.784,0.00242718446602]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","16:CMIP:81445541:+:16:BCO1:81245475:+:rev","CMIP--BCO1","ENSG00000153815","ENSG00000135697",6.0,2.0,1.0,1.0,0.934,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","3:PPARG:12312453:+:3:SYN2:12151237:+:rev","PPARG--SYN2","ENSG00000132170","ENSG00000157152",13.0,1.0,1.0,1.0,0.615,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","3:RHOA:49411820:-:3:CACNA2D2:50394168:-:rev","RHOA--CACNA2D2","ENSG00000067560","ENSG00000007402",4.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","6:PPP2R5D:42989688:+:6:UBR2:42684794:+:rev","PPP2R5D--UBR2","ENSG00000112640","ENSG00000024048",13.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","6:TULP4:158314268:+:6:ZDHHC14:157647259:+:rev","TULP4--ZDHHC14","ENSG00000130338","ENSG00000175048",9.0,1.0,1.0,1.0,0.576,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","8:RNF19A:100264034:-:8:ANKRD46:100533311:-:rev","RNF19A--ANKRD46","ENSG00000034677","ENSG00000186106",2.0,1.0,1.0,1.0,0.544,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","X:BX276092.9:71701043:+:X:OGT:71573620:+:rev","BX276092.9--OGT","ENSG00000281852","ENSG00000147162",2.0,1.0,1.0,1.0,0.45,"NA"]
["TCGA_BLCA","TCGA-FD-A3SL-01A","4:FAT1:186706563:-:4:EPHA5-AS1:65693109:+:strandcross","FAT1--EPHA5-AS1","ENSG00000083857","ENSG00000250846",4.0,1.0,1.0,1.0,0.246,0.00854700854701]
["TCGA_BLCA","TCGA-FD-A3SL-01A","17:IKZF3:39829387:-:17:MED24:40019933:-:rev","IKZF3--MED24","ENSG00000161405","ENSG00000008838",15.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_BLCA","TCGA-FD-A3SM-01A","2:ZNF638:71331865:+:2:C2orf78:73813477:+:reg","ZNF638--C2orf78","ENSG00000075292","ENSG00000187833",5.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-FD-A3SM-01A","2:ZNF638:71331875:+:2:C2orf78:73813477:+:reg","ZNF638--C2orf78","ENSG00000075292","ENSG00000187833",2.0,1.0,1.0,1.0,0.907,0.0]
["TCGA_BLCA","TCGA-FD-A3SN-01A","3:NISCH:52490833:+:3:PBRM1:52609955:-:strandcross","NISCH--PBRM1","ENSG00000010322","ENSG00000163939",2.0,1.0,1.0,1.0,0.894,0.00234741784038]
["TCGA_BLCA","TCGA-FD-A3SN-01A","22:LINC01399:35230998:-:22:RBFOX2:35938897:-:rev","LINC01399--RBFOX2","ENSG00000233080","ENSG00000100320",1.0,1.0,1.0,1.0,0.805,"NA"]
["TCGA_BLCA","TCGA-FD-A3SO-01A","19:TGFB1:41332128:-:19:FXYD5:35164156:+:strandcross","TGFB1--FXYD5","ENSG00000105329","ENSG00000089327",22.0,1.0,1.0,1.0,0.901383904854121,0.0]
["TCGA_BLCA","TCGA-FD-A3SO-01A","19:TOMM40:44894066:+:12:PDZRN4:41506456:+:fusion","TOMM40--PDZRN4","ENSG00000130204","ENSG00000165966",7.0,1.0,1.0,1.0,0.434,0.0067264573991]
["TCGA_BLCA","TCGA-FD-A3SP-01A","10:CCNY:35337207:+:10:ANK3:60114331:-:strandcross","CCNY--ANK3","ENSG00000108100","ENSG00000151150",5.0,1.0,1.0,1.0,0.651,0.0025974025974]
["TCGA_BLCA","TCGA-FD-A3SP-01A","4:LARP7:112654159:+:4:AC110800.1:93318875:-:strandcross","LARP7--AC110800.1","ENSG00000174720","ENSG00000250908",7.0,1.0,1.0,1.0,0.426,0.012987012987]
["TCGA_BLCA","TCGA-FD-A3SP-01A","8:RIMS2:103942926:+:8:UBR5:102265278:-:strandcross","RIMS2--UBR5","ENSG00000176406","ENSG00000104517",4.0,1.0,1.0,1.0,0.337,0.0207792207792]
["TCGA_BLCA","TCGA-FD-A3SP-01A","7:SMURF1:99121146:-:7:AZGP1:99972006:-:rev","SMURF1--AZGP1","ENSG00000198742","ENSG00000160862",2.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_BLCA","TCGA-FD-A3SQ-01A","17:SGSM2:2343620:+:17:EPN2:19309885:+:reg","SGSM2--EPN2","ENSG00000141258","ENSG00000072134",26.0,1.0,1.0,1.0,0.937944983330514,0.0]
["TCGA_BLCA","TCGA-FD-A3SR-01A","18:SMCHD1:2747647:+:18:DLGAP1:4151287:-:strandcross","SMCHD1--DLGAP1","ENSG00000101596","ENSG00000170579",1.0,1.0,1.0,1.0,0.712,0.00138504155125]
["TCGA_BLCA","TCGA-FD-A3SR-01A","19:AC092279.1:24049548:+:19:NANOS3:13880442:+:rev","AC092279.1--NANOS3","ENSG00000268362","ENSG00000187556",4.0,1.0,1.0,1.0,0.587,0.00277008310249]
["TCGA_BLCA","TCGA-FD-A3SR-01A","19:POLR2E:1089472:-:19:ZNF420:37127128:+:strandcross","POLR2E--ZNF420","ENSG00000099817","ENSG00000197050",12.0,1.0,1.0,1.0,0.358,0.00554016620499]
["TCGA_BLCA","TCGA-FD-A3SR-01A","4:NELFA:2008750:-:8:AF279873.3:34034886:+:fusion","NELFA--AF279873.3","ENSG00000185049","ENSG00000253642",34.0,1.0,1.0,1.0,0.204845069500608,0.01108033241]
["TCGA_BLCA","TCGA-FD-A3SR-01A","4:RAPGEF2:159314768:+:4:OCIAD2:48904611:-:strandcross","RAPGEF2--OCIAD2","ENSG00000109756","ENSG00000145247",66.0,1.0,1.0,1.0,0.669952536648502,0.00138504155125]
["TCGA_BLCA","TCGA-FD-A3SR-01A","7:EGFR:55019365:+:1:AL355482.2:182089365:+:fusion","EGFR--AL355482.2","ENSG00000146648","ENSG00000225982",5.0,1.0,1.0,1.0,0.9,0.0]
["TCGA_BLCA","TCGA-FD-A3SR-01A","8:IKBKB:42272205:+:8:UNC5D:35549292:+:rev","IKBKB--UNC5D","ENSG00000104365","ENSG00000156687",13.0,1.0,1.0,1.0,0.571,0.00415512465374]
["TCGA_BLCA","TCGA-FD-A3SS-01A","2:GPN1:27629952:+:2:AC079610.1:213278531:-:strandcross","GPN1--AC079610.1","ENSG00000259080","ENSG00000196096",27.0,1.0,1.0,1.0,0.687380079697357,0.00662251655629]
["TCGA_BLCA","TCGA-FD-A3SS-01A","2:GPN1:27629952:+:2:AC079610.3:213267060:-:strandcross","GPN1--AC079610.3","ENSG00000259080","ENSG00000272519",7.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BLCA","TCGA-FD-A43N-01A","11:NUP98:3753316:-:11:DNHD1:6571636:+:strandcross","NUP98--DNHD1","ENSG00000110713","ENSG00000179532",3.0,1.0,1.0,1.0,0.445,0.00915750915751]
["TCGA_BLCA","TCGA-FD-A43N-01A","11:PLEKHA7:17013989:-:11:TRIM21:4390458:-:reg","PLEKHA7--TRIM21","ENSG00000166689","ENSG00000132109",6.0,1.0,1.0,1.0,0.572,0.00915750915751]
["TCGA_BLCA","TCGA-FD-A43N-01A","17:RAB11FIP4:31434122:+:17:ASIC2:33024014:-:strandcross","RAB11FIP4--ASIC2","ENSG00000131242","ENSG00000108684",2.0,1.0,1.0,1.0,0.947,0.0018315018315]
["TCGA_BLCA","TCGA-FD-A43N-01A","20:CDS2:5127149:+:20:LINC00687:11810439:-:strandcross","CDS2--LINC00687","ENSG00000101290","ENSG00000228422",25.0,1.0,1.0,1.0,0.899461151943044,0.003663003663]
["TCGA_BLCA","TCGA-FD-A43N-01A","22:BCR:23273774:+:22:PPIL2:21693816:+:rev","BCR--PPIL2","ENSG00000186716","ENSG00000100023",10.0,1.0,1.0,1.0,0.656,0.00549450549451]
["TCGA_BLCA","TCGA-FD-A43N-01A","4:WDFY3:84735043:-:10:LINC00707:6781304:+:fusion","WDFY3--LINC00707","ENSG00000163625","ENSG00000238266",3.0,1.0,1.0,1.0,0.37,0.0128205128205]
["TCGA_BLCA","TCGA-FD-A43P-01A","10:ZMYND11:221356:+:5:CDH18:20255505:-:fusion","ZMYND11--CDH18","ENSG00000015171","ENSG00000145526",10.0,1.0,1.0,1.0,0.874,0.001287001287]
["TCGA_BLCA","TCGA-FD-A43P-01A","11:AP000873.2:83191055:-:17:HELZ:67124014:-:fusion","AP000873.2--HELZ","ENSG00000247137","ENSG00000198265",3.0,1.0,1.0,1.0,0.895,0.001287001287]
["TCGA_BLCA","TCGA-FD-A43P-01A","15:FAM189A1:29196430:-:15:GABRG3:27326809:+:strandcross","FAM189A1--GABRG3","ENSG00000104059","ENSG00000182256",3.0,1.0,1.0,1.0,0.914,0.001287001287]
["TCGA_BLCA","TCGA-FD-A43P-01A","15:FAM189A1:29252368:-:15:GABRG3:27326809:+:strandcross","FAM189A1--GABRG3","ENSG00000104059","ENSG00000182256",5.0,1.0,1.0,1.0,0.956,0.0]
["TCGA_BLCA","TCGA-FD-A43P-01A","17:NF1:31265339:+:19:LINC01837:31910613:-:fusion","NF1--LINC01837","ENSG00000196712","ENSG00000267489",8.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_BLCA","TCGA-FD-A43P-01A","17:TLK2:62536337:+:17:THRA:40083835:+:rev","TLK2--THRA","ENSG00000146872","ENSG00000126351",25.0,1.0,1.0,1.0,0.488529898310095,0.00514800514801]
["TCGA_BLCA","TCGA-FD-A43P-01A","22:GRK3:25565153:+:17:RHBDL3:32284659:+:fusion","GRK3--RHBDL3","ENSG00000100077","ENSG00000141314",10.0,1.0,1.0,1.0,0.667,0.003861003861]
["TCGA_BLCA","TCGA-FD-A43P-01A","22:GRK3:25565153:+:17:RHBDL3:32288792:+:fusion","GRK3--RHBDL3","ENSG00000100077","ENSG00000141314",16.0,1.0,1.0,1.0,0.491049486482488,0.00514800514801]
["TCGA_BLCA","TCGA-FD-A43P-01A","6:C6orf203:107028271:+:6:PDSS2:107154777:-:strandcross","C6orf203--PDSS2","ENSG00000130349","ENSG00000164494",3.0,1.0,1.0,1.0,0.83,0.001287001287]
["TCGA_BLCA","TCGA-FD-A43P-01A","6:C6orf203:107040230:+:6:PDSS2:107154777:-:strandcross","C6orf203--PDSS2","ENSG00000130349","ENSG00000164494",6.0,1.0,1.0,1.0,0.486,0.00514800514801]
["TCGA_BLCA","TCGA-FD-A43X-01A","21:AP001628.1:42836448:-:21:RUNX1:35864467:-:reg","AP001628.1--RUNX1","ENSG00000225218","ENSG00000159216",15.0,1.0,1.0,1.0,0.452,0.0109170305677]
["TCGA_BLCA","TCGA-FD-A43Y-01A","10:TNKS2:91798889:+:1:AL121987.2:160202516:-:fusion","TNKS2--AL121987.2","ENSG00000107854","ENSG00000227741",5.0,1.0,1.0,1.0,0.743,0.00198412698413]
["TCGA_BLCA","TCGA-FD-A43Y-01A","18:SETBP1:44869283:+:1:NFYC:40738836:+:fusion","SETBP1--NFYC","ENSG00000152217","ENSG00000066136",6.0,1.0,1.0,1.0,0.525,0.00992063492063]
["TCGA_BLCA","TCGA-FD-A5BR-01A","10:CDK1:60780202:+:8:NRG1:32727949:+:fusion","CDK1--NRG1","ENSG00000170312","ENSG00000157168",2.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-FD-A5BS-01A","10:PFKFB3:6203336:+:10:GDI2:5800705:-:strandcross","PFKFB3--GDI2","ENSG00000170525","ENSG00000057608",6.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_BLCA","TCGA-FD-A5BT-01A","2:FN1:215382212:-:6:TARID:133506270:-:fusion","FN1--TARID","ENSG00000115414","ENSG00000227954",40.0,1.0,1.0,1.0,0.909048477608504,0.00166666666667]
["TCGA_BLCA","TCGA-FD-A5BT-01A","2:FN1:215382212:-:6:TARID:133507321:-:fusion","FN1--TARID","ENSG00000115414","ENSG00000227954",32.0,1.0,1.0,1.0,0.538985924438037,0.00333333333333]
["TCGA_BLCA","TCGA-FD-A5BT-01A","3:FNDC3B:172251541:+:19:EMP3:48325991:+:fusion","FNDC3B--EMP3","ENSG00000075420","ENSG00000142227",2.0,1.0,1.0,1.0,0.978,0.00166666666667]
["TCGA_BLCA","TCGA-FD-A5BT-01A","3:FNDC3B:172251541:+:19:EMP3:48326830:+:fusion","FNDC3B--EMP3","ENSG00000075420","ENSG00000142227",15.0,1.0,1.0,1.0,0.248,0.01]
["TCGA_BLCA","TCGA-FD-A5BT-01A","3:FNDC3B:172251541:+:19:EMP3:48329352:+:fusion","FNDC3B--EMP3","ENSG00000075420","ENSG00000142227",27.0,1.0,1.0,1.0,0.887255981985486,0.00166666666667]
["TCGA_BLCA","TCGA-FD-A5BU-01A","1:BSDC1:32386779:-:16:AC099313.1:80738661:+:fusion","BSDC1--AC099313.1","ENSG00000160058","ENSG00000260594",2.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A5BU-01A","19:CIRBP:1269410:+:19:PTBP1:803561:+:rev","CIRBP--PTBP1","ENSG00000099622","ENSG00000011304",1.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BLCA","TCGA-FD-A5BV-01A","11:SCUBE2:9069370:-:11:LDHC:18429737:+:strandcross","SCUBE2--LDHC","ENSG00000175356","ENSG00000166796",7.0,1.0,1.0,1.0,0.588,0.0132743362832]
["TCGA_BLCA","TCGA-FD-A5BY-01A","2:FN1:215382212:-:4:HNRNPDL:82424883:-:fusion","FN1--HNRNPDL","ENSG00000115414","ENSG00000152795",3.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_BLCA","TCGA-FD-A5BY-01A","19:SPPL2B:2328775:+:19:MUM1:1369265:+:rev","SPPL2B--MUM1","ENSG00000005206","ENSG00000160953",1.0,1.0,1.0,1.0,0.89,"NA"]
["TCGA_BLCA","TCGA-FD-A5BZ-01A","1:PFDN2:161117952:-:1:DEDD:161124526:-:rev","PFDN2--DEDD","ENSG00000143256","ENSG00000158796",31.0,2.0,1.0,1.0,0.912472939436702,"NA"]
["TCGA_BLCA","TCGA-FD-A5BZ-01A","3:IRAK2:10213548:+:3:BRK1:10125626:+:rev","IRAK2--BRK1","ENSG00000134070","ENSG00000254999",5.0,2.0,2.0,2.0,0.853,"NA"]
["TCGA_BLCA","TCGA-FD-A5C0-01A","21:DIP2A:46484828:+:16:AC092718.3:81063993:-:fusion","DIP2A--AC092718.3","ENSG00000160305","ENSG00000166455",8.0,1.0,1.0,1.0,0.928,0.00367647058824]
["TCGA_BLCA","TCGA-FD-A5C0-01A","21:DIP2A:46484828:+:16:C16orf46:81054094:-:fusion","DIP2A--C16orf46","ENSG00000160305","ENSG00000166455",65.0,1.0,1.0,1.0,0.864174529933476,0.00367647058824]
["TCGA_BLCA","TCGA-FD-A5C0-01A","21:DIP2A:46484828:+:16:C16orf46:81062138:-:fusion","DIP2A--C16orf46","ENSG00000160305","ENSG00000166455",7.0,1.0,1.0,1.0,0.917,0.00367647058824]
["TCGA_BLCA","TCGA-FD-A5C0-01A","21:DIP2A:46484828:+:16:C16orf46:81066281:-:fusion","DIP2A--C16orf46","ENSG00000160305","ENSG00000166455",5.0,1.0,1.0,1.0,0.864,0.00367647058824]
["TCGA_BLCA","TCGA-FD-A5C0-01A","4:CCSER1:90127831:+:4:AC097478.1:89587821:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",8.0,5.0,5.0,5.0,0.98,"NA"]
["TCGA_BLCA","TCGA-FD-A62N-01A","10:LIPA:89245676:-:11:TMEM132A:60927204:+:fusion","LIPA--TMEM132A","ENSG00000107798","ENSG00000006118",4.0,1.0,1.0,1.0,0.803,0.00113378684807]
["TCGA_BLCA","TCGA-FD-A62O-01A","14:DHRS2:23630235:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,4.0,4.0,3.0,0.853,0.00350877192982]
["TCGA_BLCA","TCGA-FD-A62O-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",29.0,44.0,40.0,34.0,0.819601113933131,0.00350877192982]
["TCGA_BLCA","TCGA-FD-A62O-01A","8:BAG4:38177139:+:8:WRN:31154624:+:rev","BAG4--WRN","ENSG00000156735","ENSG00000165392",3.0,1.0,1.0,1.0,0.522,0.0105263157895]
["TCGA_BLCA","TCGA-FD-A62O-01A","8:BAG4:38192795:+:8:WRN:31154624:+:rev","BAG4--WRN","ENSG00000156735","ENSG00000165392",27.0,1.0,1.0,1.0,0.554748360935286,0.0105263157895]
["TCGA_BLCA","TCGA-FD-A62P-01A","5:HMGCS1:43292474:-:19:UNC13A:17646111:-:fusion","HMGCS1--UNC13A","ENSG00000112972","ENSG00000130477",1.0,1.0,1.0,1.0,0.702,0.00507614213198]
["TCGA_BLCA","TCGA-FD-A62P-01A","5:HMGCS1:43292848:-:19:UNC13A:17646111:-:fusion","HMGCS1--UNC13A","ENSG00000112972","ENSG00000130477",2.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BLCA","TCGA-FD-A62P-01A","11:CTNND1:57762046:+:11:ZDHHC5:57688508:+:rev","CTNND1--ZDHHC5","ENSG00000198561","ENSG00000156599",1.0,2.0,2.0,1.0,0.935,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","19:TOMM40:44894066:+:19:BCAM:44811225:+:rev","TOMM40--BCAM","ENSG00000130204","ENSG00000187244",2.0,1.0,1.0,1.0,0.782,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","1:EYA3:28057994:-:1:DNAJC8:28229023:-:rev","EYA3--DNAJC8","ENSG00000158161","ENSG00000126698",1.0,1.0,1.0,1.0,0.829,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","4:HOPX:56681255:-:4:SPINK2:56820579:-:rev","HOPX--SPINK2","ENSG00000171476","ENSG00000128040",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","6:ADGRF1:47016617:-:6:TNFRSF21:47253521:-:rev","ADGRF1--TNFRSF21","ENSG00000153292","ENSG00000146072",4.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:PPP6R3:68576043:+:11:SHANK2:71147338:-:strandcross","PPP6R3--SHANK2","ENSG00000110075","ENSG00000162105",20.0,1.0,1.0,1.0,0.856326493941542,0.0]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:PPP6R3:68583129:+:11:SHANK2:71147338:-:strandcross","PPP6R3--SHANK2","ENSG00000110075","ENSG00000162105",2.0,1.0,1.0,1.0,0.882,0.0]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:PPP6R3:68583129:+:11:SHANK2:71174844:-:strandcross","PPP6R3--SHANK2","ENSG00000110075","ENSG00000162105",6.0,1.0,1.0,1.0,0.414,0.00496277915633]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:RAB30:83034172:-:11:DPP3:66504612:+:strandcross","RAB30--DPP3","ENSG00000137502","ENSG00000254986",1.0,1.0,1.0,1.0,0.867,0.0]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:RAB30:83071691:-:11:DPP3:66504612:+:strandcross","RAB30--DPP3","ENSG00000137502","ENSG00000254986",3.0,1.0,1.0,1.0,0.682,0.00248138957816]
["TCGA_BLCA","TCGA-FD-A62S-01A","11:TENM4:79440509:-:11:DPP3:66504612:+:strandcross","TENM4--DPP3","ENSG00000149256","ENSG00000254986",3.0,1.0,1.0,1.0,0.519,0.00496277915633]
["TCGA_BLCA","TCGA-FD-A6TA-01A","16:CHD9:53055077:+:19:AC020915.1:58306088:+:fusion","CHD9--AC020915.1","ENSG00000177200","ENSG00000283515",14.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_BLCA","TCGA-FD-A6TA-01A","8:ZFPM2-AS1:105927651:-:6:SYNE1:152149668:-:fusion","ZFPM2-AS1--SYNE1","ENSG00000251003","ENSG00000131018",3.0,1.0,1.0,1.0,0.901,0.0]
["TCGA_BLCA","TCGA-FD-A6TA-01A","2:COBLL1:164841156:-:2:SCN3A:165164520:-:rev","COBLL1--SCN3A","ENSG00000082438","ENSG00000153253",2.0,1.0,1.0,1.0,0.492,"NA"]
["TCGA_BLCA","TCGA-FD-A6TA-01A","2:COBLL1:164841156:-:2:SCN3A:165170548:-:rev","COBLL1--SCN3A","ENSG00000082438","ENSG00000153253",7.0,1.0,1.0,1.0,0.728,"NA"]
["TCGA_BLCA","TCGA-FD-A6TB-01A","12:GAS2L3:100601753:+:12:MED13L:115966243:-:strandcross","GAS2L3--MED13L","ENSG00000139354","ENSG00000123066",11.0,1.0,1.0,1.0,0.744,0.00190476190476]
["TCGA_BLCA","TCGA-FD-A6TC-01A","12:MIR200CHG:6963348:+:12:AC024940.1:31114927:-:strandcross","MIR200CHG--AC024940.1","ENSG00000257084","ENSG00000177359",207.0,1.0,1.0,1.0,0.765629373653969,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","19:CCDC9:47266792:+:19:NUP62:49909884:-:strandcross","CCDC9--NUP62","ENSG00000105321","ENSG00000213024",21.0,1.0,1.0,1.0,0.847703642604228,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","1:CDC42BPA:227317005:-:16:AC027279.2:78996202:+:fusion","CDC42BPA--AC027279.2","ENSG00000143776","ENSG00000261537",2.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","1:CDC42BPA:227317005:-:16:WWOX:79211608:+:fusion","CDC42BPA--WWOX","ENSG00000143776","ENSG00000186153",7.0,1.0,1.0,1.0,0.745,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","20:COMMD7:32704023:-:19:KF456478.1:3121452:-:fusion","COMMD7--KF456478.1","ENSG00000149600","ENSG00000267688",3.0,2.0,2.0,1.0,0.742,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","20:OVOL2:18041534:-:20:CBLN4:55998754:-:rev","OVOL2--CBLN4","ENSG00000125850","ENSG00000054803",2.0,1.0,1.0,1.0,0.844,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","21:AP003900.1:10342616:-:13:POLR1D:27665686:+:fusion","AP003900.1--POLR1D","ENSG00000277693","ENSG00000186184",15.0,1.0,1.0,1.0,0.601,0.00207468879668]
["TCGA_BLCA","TCGA-FD-A6TD-01A","12:SCNN1A:6374368:-:12:CD27-AS1:6439676:-:rev","SCNN1A--CD27-AS1","ENSG00000111319","ENSG00000215039",3.0,1.0,1.0,1.0,0.918,"NA"]
["TCGA_BLCA","TCGA-FD-A6TD-01A","12:SCNN1A:6374368:-:12:CD27-AS1:6447087:-:rev","SCNN1A--CD27-AS1","ENSG00000111319","ENSG00000215039",6.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_BLCA","TCGA-FD-A6TD-01A","12:SCNN1A:6374368:-:12:CD27-AS1:6448150:-:rev","SCNN1A--CD27-AS1","ENSG00000111319","ENSG00000215039",15.0,1.0,1.0,1.0,0.769,"NA"]
["TCGA_BLCA","TCGA-FD-A6TD-01A","13:TFDP1:113631744:+:13:CUL4A:113229446:+:rev","TFDP1--CUL4A","ENSG00000198176","ENSG00000139842",8.0,1.0,1.0,1.0,0.759,"NA"]
["TCGA_BLCA","TCGA-FD-A6TD-01A","16:TRAF7:2164001:+:16:MAPK8IP3:1766904:+:rev","TRAF7--MAPK8IP3","ENSG00000131653","ENSG00000138834",26.0,1.0,1.0,1.0,0.932534831973471,"NA"]
["TCGA_BLCA","TCGA-FD-A6TE-01A","10:USP54:73505308:-:10:ZNF503-AS2:75407255:+:strandcross","USP54--ZNF503-AS2","ENSG00000166348","ENSG00000237149",17.0,1.0,1.0,1.0,0.448882897222149,0.00384615384615]
["TCGA_BLCA","TCGA-FD-A6TG-01A","12:ARPC3:110450255:-:19:TYROBP:35907580:-:fusion","ARPC3--TYROBP","ENSG00000111229","ENSG00000011600",6.0,1.0,1.0,1.0,0.377,0.0133333333333]
["TCGA_BLCA","TCGA-FD-A6TG-01A","17:ZNHIT3:36486785:+:7:WDR60:158922377:+:fusion","ZNHIT3--WDR60","ENSG00000273611","ENSG00000126870",5.0,1.0,1.0,1.0,0.627,0.008]
["TCGA_BLCA","TCGA-FD-A6TG-01A","17:ZNHIT3:36486966:+:7:WDR60:158922377:+:fusion","ZNHIT3--WDR60","ENSG00000273611","ENSG00000126870",13.0,1.0,1.0,1.0,0.387,0.0133333333333]
["TCGA_BLCA","TCGA-FD-A6TG-01A","19:FKRP:46748088:+:12:XPOT:64416698:+:fusion","FKRP--XPOT","ENSG00000181027","ENSG00000184575",3.0,1.0,1.0,1.0,0.242,0.0213333333333]
["TCGA_BLCA","TCGA-FD-A6TG-01A","19:SAMD4B:39342576:+:19:HKR1:37316995:+:rev","SAMD4B--HKR1","ENSG00000179134","ENSG00000181666",2.0,1.0,1.0,1.0,0.279,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","19:SPINT2:38290575:+:12:GRIP1:66541950:-:fusion","SPINT2--GRIP1","ENSG00000167642","ENSG00000155974",11.0,1.0,1.0,1.0,0.34,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","1:OSBPL9:51652041:+:1:AGBL4:48590985:-:strandcross","OSBPL9--AGBL4","ENSG00000117859","ENSG00000186094",9.0,1.0,1.0,1.0,0.29,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:ANKRD28:15859377:-:3:GRM7:7740357:+:strandcross","ANKRD28--GRM7","ENSG00000206560","ENSG00000196277",13.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:DLG1:197194425:-:19:MYO9B:17191097:+:fusion","DLG1--MYO9B","ENSG00000075711","ENSG00000099331",10.0,1.0,1.0,1.0,0.409,0.0133333333333]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:EEFSEC:128358373:+:8:NSMCE2:125151171:+:fusion","EEFSEC--NSMCE2","ENSG00000132394","ENSG00000156831",2.0,1.0,1.0,1.0,0.941,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:LPP:188609844:+:3:RNF168:196475312:-:strandcross","LPP--RNF168","ENSG00000145012","ENSG00000163961",2.0,1.0,1.0,1.0,0.725,0.00266666666667]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:ZNF148:125331158:-:17:AC099850.1:59117924:+:fusion","ZNF148--AC099850.1","ENSG00000163848","ENSG00000224738",7.0,1.0,1.0,1.0,0.294,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:ZNF148:125331158:-:1:RPRD2:150457288:+:fusion","ZNF148--RPRD2","ENSG00000163848","ENSG00000163125",8.0,1.0,1.0,1.0,0.563,0.0106666666667]
["TCGA_BLCA","TCGA-FD-A6TG-01A","6:GFOD1:13486638:-:6:LINC00240:27023254:+:strandcross","GFOD1--LINC00240","ENSG00000145990","ENSG00000224843",7.0,1.0,1.0,1.0,0.878,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","7:SNX13:17940284:-:7:GLCCI1:8003908:+:strandcross","SNX13--GLCCI1","ENSG00000071189","ENSG00000283549",7.0,1.0,1.0,1.0,0.83,0.00266666666667]
["TCGA_BLCA","TCGA-FD-A6TG-01A","X:OPHN1:68432867:-:1:LINC01720:190799801:+:fusion","OPHN1--LINC01720","ENSG00000079482","ENSG00000231175",3.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","5:PLPP1:55534572:-:5:SLC38A9:55697992:-:rev","PLPP1--SLC38A9","ENSG00000067113","ENSG00000177058",8.0,2.0,3.0,2.0,0.617,"NA"]
["TCGA_BLCA","TCGA-FD-A6TH-01A","17:LLGL2:75573631:+:17:AP2B1:35709224:+:rev","LLGL2--AP2B1","ENSG00000073350","ENSG00000006125",2.0,1.0,1.0,1.0,0.83,0.0]
["TCGA_BLCA","TCGA-FD-A6TH-01A","17:METRNL:83085323:+:17:DYNLL2:58087082:+:rev","METRNL--DYNLL2","ENSG00000176845","ENSG00000264364",2.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_BLCA","TCGA-FD-A6TH-01A","17:STARD3:39637231:+:17:ABR:1070090:-:strandcross","STARD3--ABR","ENSG00000131748","ENSG00000159842",8.0,1.0,1.0,1.0,0.311,0.00655021834061]
["TCGA_BLCA","TCGA-FD-A6TI-01A","6:ARID1B:156829421:+:6:SMOC2:168650681:+:reg","ARID1B--SMOC2","ENSG00000049618","ENSG00000112562",3.0,1.0,1.0,1.0,0.363,0.0145278450363]
["TCGA_BLCA","TCGA-FD-A6TK-01A","16:CLEC16A:11061022:+:16:MMP25-AS1:3055945:-:strandcross","CLEC16A--MMP25-AS1","ENSG00000038532","ENSG00000261971",2.0,1.0,1.0,1.0,0.532,0.00386847195358]
["TCGA_BLCA","TCGA-FD-A6TK-01A","22:MIRLET7BHG:46098558:+:10:HKDC1:69265585:+:fusion","MIRLET7BHG--HKDC1","ENSG00000197182","ENSG00000156510",7.0,1.0,1.0,1.0,0.951,0.00193423597679]
["TCGA_BLCA","TCGA-FD-A6TK-01A","22:MIRLET7BHG:46103249:+:10:HKDC1:69265585:+:fusion","MIRLET7BHG--HKDC1","ENSG00000197182","ENSG00000156510",3.0,1.0,1.0,1.0,0.204,0.0116054158607]
["TCGA_BLCA","TCGA-FD-A6TK-01A","8:MTERF3:96256962:-:8:AC110275.1:43077216:+:strandcross","MTERF3--AC110275.1","ENSG00000156469","ENSG00000254673",7.0,1.0,1.0,1.0,0.493,0.00386847195358]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","11:TMEM258:61792556:-:11:SCGB1D2:62243289:+:strandcross","TMEM258--SCGB1D2","ENSG00000134825","ENSG00000124935",11.0,1.0,1.0,1.0,0.415,0.00828729281768]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","19:RPS19:41861212:+:1:AL355860.1:150912242:+:fusion","RPS19--AL355860.1","ENSG00000105372","ENSG00000283324",383.0,1.0,1.0,1.0,0.999861325916124,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","1:NOTCH2:119926499:-:1:KYAT3:88949277:-:reg","NOTCH2--KYAT3","ENSG00000134250","ENSG00000137944",2.0,1.0,1.0,1.0,0.982,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","1:PAPPA2:176671115:+:19:RPS19:41869031:+:fusion","PAPPA2--RPS19","ENSG00000116183","ENSG00000105372",22.0,1.0,1.0,1.0,0.559937789748706,0.00828729281768]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","1:SRSF4:29181646:-:7:CREB5:28804199:+:fusion","SRSF4--CREB5","ENSG00000116350","ENSG00000146592",10.0,1.0,1.0,1.0,0.929,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","5:NIPBL:36877178:+:5:SPEF2:35659019:+:rev","NIPBL--SPEF2","ENSG00000164190","ENSG00000152582",4.0,1.0,1.0,1.0,0.911,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","6:PDSS2:107334198:-:6:ATG5:106293106:-:reg","PDSS2--ATG5","ENSG00000164494","ENSG00000057663",3.0,1.0,1.0,1.0,0.998,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3ZE-01A","13:POLR1D:27648453:+:1:SMYD2:214336704:+:fusion","POLR1D--SMYD2","ENSG00000186184","ENSG00000143499",2.0,1.0,1.0,1.0,0.929,0.0]
["TCGA_BLCA","TCGA-FJ-A3ZE-01A","17:ACACA:37330173:-:8:ADAM9:39007886:+:fusion","ACACA--ADAM9","ENSG00000278540","ENSG00000168615",4.0,1.0,1.0,1.0,0.841,0.0]
["TCGA_BLCA","TCGA-FJ-A3ZE-01A","17:ACACA:37330173:-:8:HTRA4:38987936:+:fusion","ACACA--HTRA4","ENSG00000278540","ENSG00000169495",152.0,1.0,1.0,1.0,0.98648413192049,0.0]
["TCGA_BLCA","TCGA-FJ-A3ZE-01A","18:MIB1:21804014:+:18:CABYR:24155701:+:reg","MIB1--CABYR","ENSG00000101752","ENSG00000154040",18.0,1.0,1.0,1.0,0.721779551254166,0.00269541778976]
["TCGA_BLCA","TCGA-FJ-A3ZE-01A","19:DNMT1:10155853:-:19:ADGRE1:6890481:+:strandcross","DNMT1--ADGRE1","ENSG00000130816","ENSG00000174837",3.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_BLCA","TCGA-FJ-A3ZF-01A","17:TAOK1:29491865:+:17:AC061975.4:28264862:+:rev","TAOK1--AC061975.4","ENSG00000160551","ENSG00000264486",19.0,1.0,1.0,1.0,0.607803950579656,0.00632911392405]
["TCGA_BLCA","TCGA-FJ-A3ZF-01A","17:UNC13D:75835409:-:17:ACOX1:75943213:-:rev","UNC13D--ACOX1","ENSG00000092929","ENSG00000161533",15.0,1.0,1.0,1.0,0.533,"NA"]
["TCGA_BLCA","TCGA-FJ-A3ZF-01A","19:ZNF613:51929896:+:19:SIGLEC7:51153063:+:rev","ZNF613--SIGLEC7","ENSG00000176024","ENSG00000168995",6.0,1.0,1.0,1.0,0.472,"NA"]
["TCGA_BLCA","TCGA-FJ-A871-01A","9:MTAP:21838010:+:9:LINGO2:28080978:-:strandcross","MTAP--LINGO2","ENSG00000099810","ENSG00000174482",46.0,1.0,1.0,1.0,0.679734723283704,0.00479616306954]
["TCGA_BLCA","TCGA-FJ-A871-01A","19:CALR:12940887:+:19:FARSA-AS1:12933149:+:rev","CALR--FARSA-AS1","ENSG00000179218","ENSG00000266975",11.0,2.0,4.0,2.0,0.908,"NA"]
["TCGA_BLCA","TCGA-FT-A3EE-01A","8:RAB11FIP1:37899071:-:8:KCNU1:36905708:+:strandcross","RAB11FIP1--KCNU1","ENSG00000156675","ENSG00000215262",58.0,1.0,1.0,1.0,0.870899269746811,0.00268096514745]
["TCGA_BLCA","TCGA-FT-A61P-01A","8:PLPBP:37766355:+:1:ENO1:8865482:-:fusion","PLPBP--ENO1","ENSG00000147471","ENSG00000074800",3.0,5.0,3.0,2.0,0.942,0.0]
["TCGA_BLCA","TCGA-G2-A2EC-01A","2:BABAM2:28129380:+:2:DTNB:25455494:-:strandcross","BABAM2--DTNB","ENSG00000158019","ENSG00000138101",4.0,1.0,1.0,1.0,0.949,0.00229357798165]
["TCGA_BLCA","TCGA-G2-A2EF-01A","13:ALG5:36985627:-:7:WBSCR17:71710761:+:fusion","ALG5--WBSCR17","ENSG00000120697","ENSG00000185274",14.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-G2-A2EF-01A","13:ALG5:36989484:-:7:WBSCR17:71710761:+:fusion","ALG5--WBSCR17","ENSG00000120697","ENSG00000185274",3.0,1.0,1.0,1.0,0.469,0.00824742268041]
["TCGA_BLCA","TCGA-G2-A2EF-01A","18:TXNL1:56638343:-:2:LRP1B:140541971:-:fusion","TXNL1--LRP1B","ENSG00000091164","ENSG00000168702",6.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-G2-A2EF-01A","4:LAP3:17581814:+:2:DDX1:15606150:+:fusion","LAP3--DDX1","ENSG00000002549","ENSG00000079785",225.0,1.0,1.0,1.0,0.982572809336253,0.0]
["TCGA_BLCA","TCGA-G2-A2EF-01A","2:VPS54:64018938:-:2:PELI1:64108379:-:rev","VPS54--PELI1","ENSG00000143952","ENSG00000197329",4.0,2.0,2.0,2.0,0.536,"NA"]
["TCGA_BLCA","TCGA-G2-A2EF-01A","8:PVT1:127890998:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",4.0,3.0,1.0,1.0,0.568,"NA"]
["TCGA_BLCA","TCGA-G2-A2EK-01A","12:CPSF6:69262562:+:22:DDX17:38501280:-:fusion","CPSF6--DDX17","ENSG00000111605","ENSG00000100201",1.0,1.0,1.0,1.0,0.808,0.0093023255814]
["TCGA_BLCA","TCGA-G2-A2EK-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",3.0,44.0,40.0,34.0,0.285,0.0232558139535]
["TCGA_BLCA","TCGA-G2-A2EK-01A","4:CCSER1:90127831:+:4:AC097478.1:89587821:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",3.0,5.0,5.0,5.0,0.69,"NA"]
["TCGA_BLCA","TCGA-G2-A2EL-01A","2:GIGYF2:232735238:+:2:MROH2A:233810794:+:reg","GIGYF2--MROH2A","ENSG00000204120","ENSG00000185038",9.0,1.0,1.0,1.0,0.559,0.0192307692308]
["TCGA_BLCA","TCGA-G2-A2EL-01A","12:AC084816.1:22787720:+:12:ETNK1:22684483:+:rev","AC084816.1--ETNK1","ENSG00000256995","ENSG00000139163",2.0,1.0,1.0,1.0,0.98,"NA"]
["TCGA_BLCA","TCGA-G2-A2EO-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",3.0,44.0,40.0,34.0,0.665,0.0054347826087]
["TCGA_BLCA","TCGA-G2-A2EO-01A","17:TAOK1:29522519:+:8:AC060765.1:82564215:-:fusion","TAOK1--AC060765.1","ENSG00000160551","ENSG00000253503",41.0,1.0,1.0,1.0,0.864043103899318,0.0036231884058]
["TCGA_BLCA","TCGA-G2-A2EO-01A","3:SETD2:47163854:-:7:BAIAP2L1:98304376:-:fusion","SETD2--BAIAP2L1","ENSG00000181555","ENSG00000006453",1.0,1.0,1.0,1.0,0.935,0.0018115942029]
["TCGA_BLCA","TCGA-G2-A2EO-01A","8:ASAP1:130214556:-:8:MRPL13:120381174:-:reg","ASAP1--MRPL13","ENSG00000153317","ENSG00000172172",35.0,1.0,1.0,1.0,0.94168373650637,0.0018115942029]
["TCGA_BLCA","TCGA-G2-A2EO-01A","8:EXT1:118110085:-:8:WDYHV1:123427924:+:strandcross","EXT1--WDYHV1","ENSG00000182197","ENSG00000156795",22.0,1.0,1.0,1.0,0.688748685725642,0.0054347826087]
["TCGA_BLCA","TCGA-G2-A2EO-01A","11:WDR74:62835431:-:11:SNHG1:62852839:-:rev","WDR74--SNHG1","ENSG00000133316","ENSG00000255717",32.0,1.0,1.0,1.0,0.62020258232148,"NA"]
["TCGA_BLCA","TCGA-G2-A2ES-01A","11:KDM2A:67121358:+:11:C11orf80:66828266:+:rev","KDM2A--C11orf80","ENSG00000173120","ENSG00000173715",1.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BLCA","TCGA-G2-A2ES-01A","12:HMGA2:65828087:+:12:MSRB3:65463155:+:rev","HMGA2--MSRB3","ENSG00000149948","ENSG00000174099",148.0,1.0,1.0,1.0,0.994866621333119,"NA"]
["TCGA_BLCA","TCGA-G2-A2ES-01A","16:SF3B3:70539207:+:16:AC012184.2:70312609:+:rev","SF3B3--AC012184.2","ENSG00000189091","ENSG00000157349",3.0,2.0,1.0,1.0,0.646,"NA"]
["TCGA_BLCA","TCGA-G2-A2ES-01A","22:KIAA1671:25014566:+:22:SNRPD3:24583682:+:rev","KIAA1671--SNRPD3","ENSG00000197077","ENSG00000100028",2.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_BLCA","TCGA-G2-A2ES-01A","22:NOL12:37688992:+:22:LGALS1:37676986:+:rev","NOL12--LGALS1","ENSG00000273899","ENSG00000100097",272.0,1.0,1.0,1.0,0.999796616000598,"NA"]
["TCGA_BLCA","TCGA-G2-A3IB-01A","11:STIP1:64186270:+:1:NSL1:212784493:-:fusion","STIP1--NSL1","ENSG00000168439","ENSG00000117697",3.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-G2-A3IB-01A","12:CMAS:22062434:+:1:GAS5:173864304:-:fusion","CMAS--GAS5","ENSG00000111726","ENSG00000234741",24.0,1.0,1.0,1.0,0.892861525035973,0.0]
["TCGA_BLCA","TCGA-G2-A3IB-01A","5:ARSI:150302063:-:5:RPS14:150446963:-:rev","ARSI--RPS14","ENSG00000183876","ENSG00000164587",1.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_BLCA","TCGA-G2-A3IB-01A","X:XG:2752335:+:X:CD99:2738203:+:rev","XG--CD99","ENSG00000124343","ENSG00000002586",2.0,1.0,1.0,1.0,0.976,"NA"]
["TCGA_BLCA","TCGA-G2-A3IE-01A","1:WARS2:119140555:-:8:OXR1:106359476:+:fusion","WARS2--OXR1","ENSG00000116874","ENSG00000164830",5.0,1.0,1.0,1.0,0.942,0.00381679389313]
["TCGA_BLCA","TCGA-G2-A3IE-01A","12:KLHL42:27781202:+:12:MRPS35:27755181:+:rev","KLHL42--MRPS35","ENSG00000087448","ENSG00000061794",23.0,1.0,2.0,1.0,0.489344955934706,"NA"]
["TCGA_BLCA","TCGA-G2-A3IE-01A","14:METTL3:21503173:-:14:SALL2:21522244:-:rev","METTL3--SALL2","ENSG00000165819","ENSG00000165821",2.0,1.0,1.0,1.0,0.642,"NA"]
["TCGA_BLCA","TCGA-G2-A3VY-01A","16:RAB40C:617268:+:16:AC009119.1:83790204:-:strandcross","RAB40C--AC009119.1","ENSG00000197562","ENSG00000260228",9.0,1.0,1.0,1.0,0.494,0.00696055684455]
["TCGA_BLCA","TCGA-G2-A3VY-01A","16:RAB40C:618260:+:16:AC009119.1:83790204:-:strandcross","RAB40C--AC009119.1","ENSG00000197562","ENSG00000260228",39.0,1.0,1.0,1.0,0.934454039173437,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","1:ARID4B:235246420:-:1:NTPCR:232978163:+:strandcross","ARID4B--NTPCR","ENSG00000054267","ENSG00000135778",30.0,1.0,1.0,1.0,0.706806510320687,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","1:NUP133:229489955:-:5:CDH6:31299464:+:fusion","NUP133--CDH6","ENSG00000069248","ENSG00000113361",3.0,1.0,1.0,1.0,0.231,0.0185614849188]
["TCGA_BLCA","TCGA-G2-A3VY-01A","1:UCK2:165827932:+:1:DARS2:173826687:+:reg","UCK2--DARS2","ENSG00000143179","ENSG00000117593",5.0,1.0,1.0,1.0,0.351,0.0116009280742]
["TCGA_BLCA","TCGA-G2-A3VY-01A","2:SCHLAP1:180692441:+:15:SLC51B:65049897:+:fusion","SCHLAP1--SLC51B","ENSG00000281131","ENSG00000186198",9.0,1.0,1.0,1.0,0.367,0.0116009280742]
["TCGA_BLCA","TCGA-G2-A3VY-01A","2:SCHLAP1:180724690:+:15:SLC51B:65049897:+:fusion","SCHLAP1--SLC51B","ENSG00000281131","ENSG00000186198",22.0,1.0,1.0,1.0,0.627490587696519,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","2:TANC1:159065971:+:2:XIRP2-AS1:167124525:-:strandcross","TANC1--XIRP2-AS1","ENSG00000115183","ENSG00000254552",6.0,1.0,1.0,1.0,0.298,0.0139211136891]
["TCGA_BLCA","TCGA-G2-A3VY-01A","2:WDSUB1:159248372:-:2:GPD2:156476098:+:strandcross","WDSUB1--GPD2","ENSG00000196151","ENSG00000115159",5.0,1.0,1.0,1.0,0.809,0.0]
["TCGA_BLCA","TCGA-G2-A3VY-01A","5:WDR70:37516590:+:12:CACNA2D4:1909965:-:fusion","WDR70--CACNA2D4","ENSG00000082068","ENSG00000151062",3.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_BLCA","TCGA-G2-A3VY-01A","6:LYRM4:5216618:-:6:AL138737.1:140086682:+:strandcross","LYRM4--AL138737.1","ENSG00000214113","ENSG00000236013",6.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_BLCA","TCGA-G2-A3VY-01A","6:LYRM4:5216618:-:6:AL138737.1:140092991:+:strandcross","LYRM4--AL138737.1","ENSG00000214113","ENSG00000236013",4.0,1.0,1.0,1.0,0.866,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","8:CHRAC1:140511646:+:8:SNTG1:50438543:+:rev","CHRAC1--SNTG1","ENSG00000104472","ENSG00000147481",2.0,1.0,1.0,1.0,0.436,0.00696055684455]
["TCGA_BLCA","TCGA-G2-A3VY-01A","8:ST3GAL1:133499135:-:8:AC022639.1:63857111:-:reg","ST3GAL1--AC022639.1","ENSG00000008513","ENSG00000253554",6.0,1.0,1.0,1.0,0.789,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","16:NPRL3:100372:-:16:LUC7L:193015:-:rev","NPRL3--LUC7L","ENSG00000103148","ENSG00000007392",6.0,1.0,1.0,1.0,0.848,"NA"]
["TCGA_BLCA","TCGA-G2-AA3B-01A","14:NRDE2:90331841:-:14:CATSPERB:91625007:-:rev","NRDE2--CATSPERB","ENSG00000119720","ENSG00000133962",4.0,1.0,1.0,1.0,0.922,0.0]
["TCGA_BLCA","TCGA-G2-AA3B-01A","18:ESCO1:21600623:-:20:AL109827.1:35632923:-:fusion","ESCO1--AL109827.1","ENSG00000141446","ENSG00000214078",5.0,1.0,1.0,1.0,0.326,0.00867678958785]
["TCGA_BLCA","TCGA-G2-AA3B-01A","3:FLNB:58008856:+:16:RHBDF1:65039:-:fusion","FLNB--RHBDF1","ENSG00000136068","ENSG00000007384",5.0,1.0,1.0,1.0,0.82,0.0]
["TCGA_BLCA","TCGA-G2-AA3B-01A","3:TBL1XR1:177197121:-:3:IQCJ-SCHIP1:159764443:+:strandcross","TBL1XR1--IQCJ-SCHIP1","ENSG00000177565","ENSG00000283154",2.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_BLCA","TCGA-G2-AA3B-01A","5:PPIP5K2:103120488:+:19:CAPN12:38731223:-:fusion","PPIP5K2--CAPN12","ENSG00000145725","ENSG00000182472",4.0,1.0,1.0,1.0,0.789,0.0]
["TCGA_BLCA","TCGA-G2-AA3B-01A","11:DEAF1:674536:-:11:PIDD1:804463:-:rev","DEAF1--PIDD1","ENSG00000177030","ENSG00000177595",2.0,2.0,2.0,1.0,0.702,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","13:DLEU2:50125302:-:13:MED4:48090418:-:reg","DLEU2--MED4","ENSG00000231607","ENSG00000136146",7.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_BLCA","TCGA-G2-AA3D-01A","14:CLMN:95319711:-:14:WDR20:102222830:+:strandcross","CLMN--WDR20","ENSG00000165959","ENSG00000140153",3.0,1.0,1.0,1.0,0.766,0.0]
["TCGA_BLCA","TCGA-G2-AA3D-01A","18:NDC80:2579029:+:18:PPP4R1:9562075:-:strandcross","NDC80--PPP4R1","ENSG00000080986","ENSG00000154845",6.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_BLCA","TCGA-G2-AA3D-01A","13:ATP11A:112836251:+:13:SPACA7:112432444:+:rev","ATP11A--SPACA7","ENSG00000068650","ENSG00000153498",1.0,1.0,2.0,1.0,0.911,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","15:CHD2:92985673:+:15:AC091544.2:92600338:+:rev","CHD2--AC091544.2","ENSG00000173575","ENSG00000258676",11.0,1.0,1.0,1.0,0.924,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","17:TOM1L2:17972262:-:17:ATPAF2:17989592:-:rev","TOM1L2--ATPAF2","ENSG00000175662","ENSG00000171953",1.0,2.0,1.0,1.0,0.963,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","1:CCNL2:1398233:-:1:MRPL20:1402256:-:rev","CCNL2--MRPL20","ENSG00000221978","ENSG00000242485",2.0,3.0,3.0,3.0,0.905,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","1:H6PD:9247083:+:1:CA6:8967659:+:rev","H6PD--CA6","ENSG00000049239","ENSG00000131686",5.0,1.0,1.0,1.0,0.681,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","7:HDAC9:18087213:+:7:AC019117.2:17466152:+:rev","HDAC9--AC019117.2","ENSG00000048052","ENSG00000283321",10.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_BLCA","TCGA-G2-AA3F-01A","12:PKP2:32868927:-:2:MAP3K20:173203796:+:fusion","PKP2--MAP3K20","ENSG00000057294","ENSG00000091436",4.0,1.0,1.0,1.0,0.941,0.0]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:ACOXL:110768464:+:2:KLHL23:169735013:+:reg","ACOXL--KLHL23","ENSG00000153093","ENSG00000213160",8.0,1.0,1.0,1.0,0.322,0.017094017094]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:ACOXL:110768464:+:2:KLHL23:169741385:+:reg","ACOXL--KLHL23","ENSG00000153093","ENSG00000213160",77.0,1.0,1.0,1.0,0.634688852841849,0.00854700854701]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:ACOXL:110768464:+:2:KLHL23:169776441:+:reg","ACOXL--KLHL23","ENSG00000153093","ENSG00000213160",2.0,1.0,1.0,1.0,0.748,0.00854700854701]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:IKZF2:213147708:-:2:ERBB4:212124903:-:reg","IKZF2--ERBB4","ENSG00000030419","ENSG00000178568",4.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:LIMS1:108534594:+:2:LINC01885:107385734:-:strandcross","LIMS1--LINC01885","ENSG00000169756","ENSG00000237880",2.0,1.0,1.0,1.0,0.619,0.00854700854701]
["TCGA_BLCA","TCGA-G2-AA3F-01A","3:GOLGA4:37251484:+:11:RRM1:4129074:+:fusion","GOLGA4--RRM1","ENSG00000144674","ENSG00000167325",25.0,1.0,1.0,1.0,0.782762718313558,0.00854700854701]
["TCGA_BLCA","TCGA-G2-AA3F-01A","3:RARRES1:158710738:-:3:RSRC1:158298039:+:strandcross","RARRES1--RSRC1","ENSG00000118849","ENSG00000174891",4.0,1.0,1.0,1.0,0.922,0.0]
["TCGA_BLCA","TCGA-G2-AA3F-01A","3:RARRES1:158713797:-:3:RSRC1:158298039:+:strandcross","RARRES1--RSRC1","ENSG00000118849","ENSG00000174891",19.0,1.0,1.0,1.0,0.756323484218883,0.00854700854701]
["TCGA_BLCA","TCGA-G2-AA3F-01A","3:RARRES1:158713797:-:3:RSRC1:158354857:+:strandcross","RARRES1--RSRC1","ENSG00000118849","ENSG00000174891",28.0,1.0,1.0,1.0,0.573713061691123,0.0128205128205]
["TCGA_BLCA","TCGA-G2-AA3F-01A","5:DMXL1:119071656:+:2:ARHGAP15:143435601:+:fusion","DMXL1--ARHGAP15","ENSG00000172869","ENSG00000075884",8.0,1.0,1.0,1.0,0.551,0.0128205128205]
["TCGA_BLCA","TCGA-G2-AA3F-01A","9:VAV2:133992075:-:9:BRD3:134053590:-:rev","VAV2--BRD3","ENSG00000160293","ENSG00000169925",1.0,1.0,1.0,1.0,0.963,"NA"]
["TCGA_BLCA","TCGA-GC-A3BM-01A","19:AC010615.2:21456461:-:19:ZNF100:21727989:-:rev","AC010615.2--ZNF100","ENSG00000268119","ENSG00000197020",2.0,1.0,1.0,1.0,0.874,"NA"]
["TCGA_BLCA","TCGA-GC-A3I6-01A","20:HM13:31527582:+:20:BCL2L1:31666086:-:strandcross","HM13--BCL2L1","ENSG00000101294","ENSG00000171552",19.0,1.0,1.0,1.0,0.427696161502354,0.00763358778626]
["TCGA_BLCA","TCGA-GC-A3I6-01A","20:HM13:31538261:+:20:BCL2L1:31666086:-:strandcross","HM13--BCL2L1","ENSG00000101294","ENSG00000171552",24.0,1.0,1.0,1.0,0.865271449273892,0.00254452926209]
["TCGA_BLCA","TCGA-GC-A3I6-01A","20:TPX2:31739621:+:20:HM13:31527484:+:rev","TPX2--HM13","ENSG00000088325","ENSG00000101294",384.0,1.0,1.0,1.0,0.999641139160084,"NA"]
["TCGA_BLCA","TCGA-GC-A3I6-01A","8:RIMS2:103501062:+:8:BAALC:103212919:+:rev","RIMS2--BAALC","ENSG00000176406","ENSG00000164929",7.0,5.0,4.0,4.0,0.437,"NA"]
["TCGA_BLCA","TCGA-GC-A3I6-01A","8:RIMS2:103501062:+:8:BAALC:103227989:+:rev","RIMS2--BAALC","ENSG00000176406","ENSG00000164929",2.0,3.0,3.0,3.0,0.922,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","10:WDR37:1086357:+:10:TUBAL3:5400967:-:strandcross","WDR37--TUBAL3","ENSG00000047056","ENSG00000178462",3.0,1.0,1.0,1.0,0.929,0.00227790432802]
["TCGA_BLCA","TCGA-GC-A3RB-01A","10:WDR37:1086357:+:10:TUBAL3:5401087:-:strandcross","WDR37--TUBAL3","ENSG00000047056","ENSG00000178462",7.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_BLCA","TCGA-GC-A3RB-01A","16:MMP15:58026512:+:16:CDH5:66379319:+:reg","MMP15--CDH5","ENSG00000102996","ENSG00000179776",10.0,1.0,1.0,1.0,0.847,0.00455580865604]
["TCGA_BLCA","TCGA-GC-A3RB-01A","17:ATAD5:30860612:+:6:PTP4A1:63576436:+:fusion","ATAD5--PTP4A1","ENSG00000176208","ENSG00000112245",8.0,1.0,1.0,1.0,0.55,0.00911161731207]
["TCGA_BLCA","TCGA-GC-A3RB-01A","19:CYP4F3:15641613:+:21:DSCR4-IT1:38006826:-:fusion","CYP4F3--DSCR4-IT1","ENSG00000186529","ENSG00000223608",4.0,1.0,1.0,1.0,0.813,0.00455580865604]
["TCGA_BLCA","TCGA-GC-A3RB-01A","6:BCLAF1:136271995:-:10:CELF2:10846063:+:fusion","BCLAF1--CELF2","ENSG00000029363","ENSG00000048740",31.0,1.0,1.0,1.0,0.585090939513167,0.00911161731207]
["TCGA_BLCA","TCGA-GC-A3RB-01A","6:KIF13A:17849377:-:13:LINC01309:103427316:+:fusion","KIF13A--LINC01309","ENSG00000137177","ENSG00000234551",5.0,1.0,1.0,1.0,0.791,0.00455580865604]
["TCGA_BLCA","TCGA-GC-A3RB-01A","6:L3MBTL3:130022305:+:10:IDI2-AS1:1043529:+:fusion","L3MBTL3--IDI2-AS1","ENSG00000198945","ENSG00000232656",19.0,1.0,1.0,1.0,0.81956571723681,0.00455580865604]
["TCGA_BLCA","TCGA-GC-A3RB-01A","7:SDK1:4178586:+:7:SLC29A4:5302797:+:reg","SDK1--SLC29A4","ENSG00000146555","ENSG00000164638",8.0,1.0,1.0,1.0,0.887,0.00227790432802]
["TCGA_BLCA","TCGA-GC-A3RB-01A","9:PTGES2:128122362:-:12:MLXIP:122141691:+:fusion","PTGES2--MLXIP","ENSG00000148334","ENSG00000175727",17.0,1.0,1.0,1.0,0.732797701230408,0.00455580865604]
["TCGA_BLCA","TCGA-GC-A3RB-01A","10:SH3PXD2A:103855195:-:10:COL17A1:104080684:-:rev","SH3PXD2A--COL17A1","ENSG00000107957","ENSG00000065618",1.0,1.0,1.0,1.0,0.812,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","11:SNHG1:62855133:-:11:PLA2G16:63598163:-:rev","SNHG1--PLA2G16","ENSG00000255717","ENSG00000176485",2.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","13:PCCA:100268783:+:13:CLYBL:99891318:+:rev","PCCA--CLYBL","ENSG00000175198","ENSG00000125246",10.0,1.0,1.0,1.0,0.733,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","17:LINC00511:72592203:-:17:SLC39A11:72736719:-:rev","LINC00511--SLC39A11","ENSG00000227036","ENSG00000133195",14.0,6.0,5.0,3.0,0.811,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","1:NIPAL3:24445244:+:1:AL591178.2:24081750:+:rev","NIPAL3--AL591178.2","ENSG00000001461","ENSG00000230703",3.0,1.0,1.0,1.0,0.862,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","1:ZBTB8OS:32650433:-:1:AK2:33014594:-:rev","ZBTB8OS--AK2","ENSG00000176261","ENSG00000004455",2.0,1.0,1.0,1.0,0.939,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","4:UBE2D3:102868715:-:4:SLC9B1:102911537:-:rev","UBE2D3--SLC9B1","ENSG00000109332","ENSG00000164037",2.0,1.0,1.0,1.0,0.603,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","6:CDC5L:44408632:+:6:TMEM63B:44134561:+:rev","CDC5L--TMEM63B","ENSG00000096401","ENSG00000137216",15.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","6:RTN4IP1:106619202:-:6:PDSS2:107245619:-:rev","RTN4IP1--PDSS2","ENSG00000130347","ENSG00000164494",1.0,1.0,1.0,1.0,0.872,"NA"]
["TCGA_BLCA","TCGA-GC-A3RB-01A","8:ZHX1-C8orf76:123267273:-:8:ATAD2:123334322:-:rev","ZHX1-C8orf76--ATAD2","ENSG00000259305","ENSG00000156802",2.0,1.0,1.0,1.0,0.939,"NA"]
["TCGA_BLCA","TCGA-GC-A3RC-01A","13:DHRS12:51799534:-:13:RASL11A:27271484:+:strandcross","DHRS12--RASL11A","ENSG00000102796","ENSG00000122035",18.0,1.0,1.0,1.0,0.640096882421564,8.39630562552E-4]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:CPSF6:69260197:+:12:CPM:68957678:-:strandcross","CPSF6--CPM","ENSG00000111605","ENSG00000135678",5.0,1.0,1.0,1.0,0.894,0.0014064697609]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:DRAM1:101877920:+:12:NUP107:68741813:+:rev","DRAM1--NUP107","ENSG00000136048","ENSG00000111581",3.0,1.0,1.0,1.0,0.232,0.0098452883263]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:DRAM1:101897930:+:12:NUP107:68741813:+:rev","DRAM1--NUP107","ENSG00000136048","ENSG00000111581",361.0,1.0,1.0,1.0,0.627005119153009,0.0042194092827]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:FRS2:69532056:+:12:PTPRR:70892977:-:strandcross","FRS2--PTPRR","ENSG00000166225","ENSG00000153233",5.0,1.0,1.0,1.0,0.341,0.0098452883263]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:GNPTAB:101780152:-:12:CNOT2:70310895:+:strandcross","GNPTAB--CNOT2","ENSG00000111670","ENSG00000111596",2.0,1.0,1.0,1.0,0.256,0.0098452883263]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:PTPRR:70892679:-:12:CHPT1:101716728:+:strandcross","PTPRR--CHPT1","ENSG00000153233","ENSG00000111666",9.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_BLCA","TCGA-GC-A3RD-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.698,0.0014064697609]
["TCGA_BLCA","TCGA-GC-A3RD-01A","15:MGA:41713496:+:9:CDKN2A:21968242:-:fusion","MGA--CDKN2A","ENSG00000174197","ENSG00000147889",37.0,1.0,1.0,1.0,0.758738063339693,0.0014064697609]
["TCGA_BLCA","TCGA-GC-A3RD-01A","1:HDAC1:32327677:+:19:PEPD:33413643:-:fusion","HDAC1--PEPD","ENSG00000116478","ENSG00000124299",3.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_BLCA","TCGA-GC-A3RD-01A","9:CDKN2A:21970902:-:15:MGA:41727180:+:fusion","CDKN2A--MGA","ENSG00000147889","ENSG00000174197",4.0,1.0,1.0,1.0,0.53,0.0084388185654]
["TCGA_BLCA","TCGA-GC-A3RD-01A","12:FRS2:69532056:+:12:NUP107:68741813:+:rev","FRS2--NUP107","ENSG00000166225","ENSG00000111581",3.0,2.0,1.0,1.0,0.9,"NA"]
["TCGA_BLCA","TCGA-GC-A3RD-01A","17:GDPD1:59220751:+:17:SMG8:59214805:+:rev","GDPD1--SMG8","ENSG00000153982","ENSG00000265303",7.0,2.0,2.0,2.0,0.864,"NA"]
["TCGA_BLCA","TCGA-GC-A3RD-01A","3:TSEN2:12496554:+:3:PPARG:12433898:+:rev","TSEN2--PPARG","ENSG00000154743","ENSG00000132170",19.0,1.0,1.0,1.0,0.86659909187069,"NA"]
["TCGA_BLCA","TCGA-GC-A3RD-01A","X:IRAK1:154018006:-:X:MECP2:154032557:-:rev","IRAK1--MECP2","ENSG00000184216","ENSG00000169057",8.0,1.0,1.0,1.0,0.937,"NA"]
["TCGA_BLCA","TCGA-GC-A3WC-01A","1:PUM1:31065616:-:1:SNRNP40:31271499:-:rev","PUM1--SNRNP40","ENSG00000134644","ENSG00000060688",2.0,1.0,1.0,1.0,0.719,"NA"]
["TCGA_BLCA","TCGA-GC-A3YS-01A","16:NFAT5:69566374:+:16:CHST4:71536660:+:reg","NFAT5--CHST4","ENSG00000102908","ENSG00000140835",10.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BLCA","TCGA-GC-A3YS-01A","16:NFAT5:69566374:+:16:TAT-AS1:71566051:+:reg","NFAT5--TAT-AS1","ENSG00000102908","ENSG00000260886",2.0,1.0,1.0,1.0,0.929,0.00227272727273]
["TCGA_BLCA","TCGA-GC-A3YS-01A","16:NFAT5:69568548:+:16:TAT-AS1:71566051:+:reg","NFAT5--TAT-AS1","ENSG00000102908","ENSG00000260886",4.0,1.0,1.0,1.0,0.863,0.00227272727273]
["TCGA_BLCA","TCGA-GC-A3YS-01A","16:NFAT5:69568548:+:16:TAT-AS1:71572020:+:reg","NFAT5--TAT-AS1","ENSG00000102908","ENSG00000260886",2.0,1.0,1.0,1.0,0.952,0.00227272727273]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","16:ERI2:20900204:-:16:TMEM159:21161085:+:strandcross","ERI2--TMEM159","ENSG00000196678","ENSG00000011638",2.0,1.0,1.0,1.0,0.854,0.0]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","16:MARF1:15600428:-:16:EEF2K:22280198:+:strandcross","MARF1--EEF2K","ENSG00000166783","ENSG00000103319",4.0,1.0,1.0,1.0,0.194,0.0202312138728]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","16:RSL1D1:11847668:-:16:CCP110:19527867:+:strandcross","RSL1D1--CCP110","ENSG00000171490","ENSG00000103540",5.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","16:USP31:23148638:-:9:AL365204.2:23895606:-:fusion","USP31--AL365204.2","ENSG00000103404","ENSG00000237414",10.0,1.0,1.0,1.0,0.347,0.00578034682081]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","22:GAS2L1:29308738:+:22:SMTN:31104316:+:reg","GAS2L1--SMTN","ENSG00000185340","ENSG00000183963",65.0,1.0,1.0,1.0,0.423876979948688,0.0028901734104]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","2:GULP1:188292166:+:2:BOLL:197743159:-:strandcross","GULP1--BOLL","ENSG00000144366","ENSG00000152430",9.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","2:GULP1:188293112:+:2:BOLL:197743159:-:strandcross","GULP1--BOLL","ENSG00000144366","ENSG00000152430",3.0,1.0,1.0,1.0,0.764,0.0]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","6:SHPRH:145952349:-:9:RCL1:4860125:+:fusion","SHPRH--RCL1","ENSG00000146414","ENSG00000120158",6.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-GC-A4ZW-01A","8:FDFT1:11802931:+:8:TNKS:9704663:+:rev","FDFT1--TNKS","ENSG00000079459","ENSG00000173273",4.0,1.0,1.0,1.0,0.795,0.0]
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["TCGA_BLCA","TCGA-GV-A3JW-01A","2:KIDINS220:8770670:-:6:EYS:63999183:-:fusion","KIDINS220--EYS","ENSG00000134313","ENSG00000188107",4.0,1.0,1.0,1.0,0.817,0.00311526479751]
["TCGA_BLCA","TCGA-GV-A3JW-01A","3:OSBPL10:31876433:-:3:GPD1L:32165814:+:strandcross","OSBPL10--GPD1L","ENSG00000144645","ENSG00000152642",12.0,1.0,1.0,1.0,0.678,0.00623052959502]
["TCGA_BLCA","TCGA-GV-A3JW-01A","5:DCP2:112976986:+:5:TBCA:77708347:-:strandcross","DCP2--TBCA","ENSG00000172795","ENSG00000171530",103.0,1.0,1.0,1.0,0.948101231087719,0.00311526479751]
["TCGA_BLCA","TCGA-GV-A3JW-01A","5:NSUN2:6632599:-:Y:TBL1Y:7080732:+:fusion","NSUN2--TBL1Y","ENSG00000037474","ENSG00000092377",3.0,1.0,1.0,1.0,0.23,0.018691588785]
["TCGA_BLCA","TCGA-GV-A3JW-01A","10:DCLRE1C:14947525:-:10:NMT2:15128458:-:rev","DCLRE1C--NMT2","ENSG00000152457","ENSG00000152465",2.0,1.0,1.0,1.0,0.986,"NA"]
["TCGA_BLCA","TCGA-GV-A3JW-01A","8:RNF19A:100274953:-:8:PABPC1:100718280:-:rev","RNF19A--PABPC1","ENSG00000034677","ENSG00000070756",3.0,1.0,1.0,1.0,0.782,"NA"]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","17:RNF213:80263778:+:1:IL22RA1:24138714:-:fusion","RNF213--IL22RA1","ENSG00000173821","ENSG00000142677",3.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","19:URI1:30005708:+:10:ZNF33A:38054375:+:fusion","URI1--ZNF33A","ENSG00000105176","ENSG00000189180",9.0,1.0,1.0,1.0,0.496,0.00621118012422]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","1:NDUFS2:161206597:+:1:PSMD4:151262161:+:rev","NDUFS2--PSMD4","ENSG00000158864","ENSG00000159352",3.0,1.0,1.0,1.0,0.211,0.0124223602484]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","6:CDKAL1:20548705:+:4:TBC1D1:38089932:+:fusion","CDKAL1--TBC1D1","ENSG00000145996","ENSG00000065882",4.0,1.0,1.0,1.0,0.242,0.0124223602484]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","11:ACER3:76861079:+:11:AP001189.4:76702972:+:rev","ACER3--AP001189.4","ENSG00000078124","ENSG00000254975",12.0,2.0,3.0,2.0,0.57,"NA"]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","11:MICALCL:12327266:+:11:USP47:11947945:+:rev","MICALCL--USP47","ENSG00000133808","ENSG00000170242",1.0,1.0,1.0,1.0,0.965,"NA"]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","18:MYO5B:50194767:-:18:CFAP53:50262219:-:rev","MYO5B--CFAP53","ENSG00000167306","ENSG00000172361",9.0,1.0,1.0,1.0,0.973,"NA"]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","2:INPP5D:233130648:+:2:GIGYF2:232856793:+:rev","INPP5D--GIGYF2","ENSG00000168918","ENSG00000204120",1.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_BLCA","TCGA-GV-A3JZ-01A","4:AC139887.2:781772:-:4:CPLX1:786698:-:rev","AC139887.2--CPLX1","ENSG00000249592","ENSG00000168993",4.0,4.0,4.0,3.0,0.903,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","5:NSD1:177212195:+:5:AC104117.3:178989747:+:reg","NSD1--AC104117.3","ENSG00000165671","ENSG00000254035",20.0,1.0,1.0,1.0,0.305010754861708,0.0114416475973]
["TCGA_BLCA","TCGA-GV-A3QF-01A","19:RHPN2:33044249:-:19:PEPD:33413643:-:rev","RHPN2--PEPD","ENSG00000131941","ENSG00000124299",30.0,1.0,1.0,1.0,0.917650054552775,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","1:ABCD3:94418588:+:1:AC097059.1:94333309:+:rev","ABCD3--AC097059.1","ENSG00000117528","ENSG00000226835",15.0,3.0,2.0,2.0,0.809,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","1:ACOT7:6318492:-:1:DNAJC11:6667810:-:rev","ACOT7--DNAJC11","ENSG00000097021","ENSG00000007923",2.0,1.0,1.0,1.0,0.599,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","20:TAF4:62064451:-:20:LAMA5:62310081:-:rev","TAF4--LAMA5","ENSG00000130699","ENSG00000130702",2.0,1.0,1.0,1.0,0.883,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","20:TAF4:62064451:-:20:LAMA5:62310311:-:rev","TAF4--LAMA5","ENSG00000130699","ENSG00000130702",23.0,1.0,1.0,1.0,0.751515822676996,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","3:LINC02015:177827830:+:3:LINC00578:177629417:+:rev","LINC02015--LINC00578","ENSG00000231574","ENSG00000228221",7.0,1.0,1.0,1.0,0.735,"NA"]
["TCGA_BLCA","TCGA-GV-A3QF-01A","5:FAM169A:74838965:-:5:ANKRD31:75118297:-:rev","FAM169A--ANKRD31","ENSG00000198780","ENSG00000145700",3.0,1.0,1.0,1.0,0.614,"NA"]
["TCGA_BLCA","TCGA-GV-A3QG-01A","15:TPM1:63062645:+:2:ALK:29223528:-:fusion","TPM1--ALK","ENSG00000140416","ENSG00000171094",228.0,1.0,1.0,1.0,0.990444415794148,0.0]
["TCGA_BLCA","TCGA-GV-A3QH-01A","1:ABCD3:94418588:+:1:ARHGAP29:94220392:-:strandcross","ABCD3--ARHGAP29","ENSG00000117528","ENSG00000137962",6.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BLCA","TCGA-GV-A3QH-01A","1:ARHGAP29:94237415:-:X:MID2:107903958:+:fusion","ARHGAP29--MID2","ENSG00000137962","ENSG00000080561",3.0,1.0,1.0,1.0,0.844,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","3:ALCAM:105367481:+:X:SH3KBP1:19569188:-:fusion","ALCAM--SH3KBP1","ENSG00000170017","ENSG00000147010",3.0,1.0,1.0,1.0,0.802,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","3:ALCAM:105367481:+:X:SH3KBP1:19588802:-:fusion","ALCAM--SH3KBP1","ENSG00000170017","ENSG00000147010",24.0,1.0,1.0,1.0,0.723904585729643,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","4:CLOCK:55546482:-:4:UGT2A3:68932759:-:rev","CLOCK--UGT2A3","ENSG00000134852","ENSG00000135220",40.0,1.0,1.0,1.0,0.872056200520113,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","4:CLOCK:55546782:-:4:UGT2A3:68932759:-:rev","CLOCK--UGT2A3","ENSG00000134852","ENSG00000135220",42.0,1.0,1.0,1.0,0.836695326008842,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","4:CLOCK:55546782:-:4:UGT2A3:68943378:-:rev","CLOCK--UGT2A3","ENSG00000134852","ENSG00000135220",2.0,1.0,1.0,1.0,0.232,0.0233236151603]
["TCGA_BLCA","TCGA-GV-A3QH-01A","4:LNX1:53496023:-:4:AC093893.1:149735458:-:rev","LNX1--AC093893.1","ENSG00000072201","ENSG00000234828",4.0,1.0,1.0,1.0,0.582,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","4:USP38:143197924:+:6:IL17F:52237168:-:fusion","USP38--IL17F","ENSG00000170185","ENSG00000112116",18.0,1.0,1.0,1.0,0.660069881750504,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","6:CDKAL1:21000372:+:6:NBAT1:22136669:-:strandcross","CDKAL1--NBAT1","ENSG00000145996","ENSG00000260455",3.0,1.0,1.0,1.0,0.431,0.00874635568513]
["TCGA_BLCA","TCGA-GV-A3QH-01A","6:GMDS-AS1:2248926:+:6:Z84485.1:36158941:-:strandcross","GMDS-AS1--Z84485.1","ENSG00000250903","ENSG00000246982",4.0,1.0,1.0,1.0,0.95,0.00291545189504]
["TCGA_BLCA","TCGA-GV-A3QH-01A","6:MBOAT1:20126517:-:6:DCDC2:24302044:-:rev","MBOAT1--DCDC2","ENSG00000172197","ENSG00000146038",24.0,1.0,1.0,1.0,0.215688515720174,0.0233236151603]
["TCGA_BLCA","TCGA-GV-A3QI-01A","11:HPS5:18321946:-:11:KCNQ1-AS1:2840442:-:reg","HPS5--KCNQ1-AS1","ENSG00000110756","ENSG00000229414",6.0,1.0,1.0,1.0,0.808,0.00783289817232]
["TCGA_BLCA","TCGA-GV-A3QI-01A","11:HPS5:18322077:-:11:KCNQ1-AS1:2840442:-:reg","HPS5--KCNQ1-AS1","ENSG00000110756","ENSG00000229414",6.0,1.0,1.0,1.0,0.909,0.00261096605744]
["TCGA_BLCA","TCGA-GV-A3QI-01A","14:SYT16:61970311:+:14:MNAT1:60879714:+:rev","SYT16--MNAT1","ENSG00000139973","ENSG00000020426",9.0,1.0,1.0,1.0,0.58,0.0104438642298]
["TCGA_BLCA","TCGA-GV-A3QI-01A","16:NPRL3:124937:-:8:KIFC2:144472361:+:fusion","NPRL3--KIFC2","ENSG00000103148","ENSG00000167702",2.0,1.0,1.0,1.0,0.591,0.0104438642298]
["TCGA_BLCA","TCGA-GV-A3QI-01A","16:NPRL3:130522:-:8:KIFC2:144472361:+:fusion","NPRL3--KIFC2","ENSG00000103148","ENSG00000167702",2.0,1.0,1.0,1.0,0.24,0.0261096605744]
["TCGA_BLCA","TCGA-GV-A3QI-01A","17:WIPF2:40219492:+:17:MED24:40053635:-:strandcross","WIPF2--MED24","ENSG00000171475","ENSG00000008838",3.0,1.0,1.0,1.0,0.919,0.00261096605744]
["TCGA_BLCA","TCGA-GV-A3QI-01A","17:WIPF2:40219492:+:17:MED24:40053657:-:strandcross","WIPF2--MED24","ENSG00000171475","ENSG00000008838",9.0,1.0,1.0,1.0,0.473,0.0104438642298]
["TCGA_BLCA","TCGA-GV-A3QI-01A","X:ENOX2:130688863:-:X:FIRRE:131692636:-:rev","ENOX2--FIRRE","ENSG00000165675","ENSG00000213468",9.0,1.0,1.0,1.0,0.981,0.00261096605744]
["TCGA_BLCA","TCGA-GV-A3QI-01A","X:ENOX2:130688863:-:X:FIRRE:131709556:-:rev","ENOX2--FIRRE","ENSG00000165675","ENSG00000213468",4.0,1.0,1.0,1.0,0.861,0.00522193211488]
["TCGA_BLCA","TCGA-GV-A3QI-01A","9:RNF38:36424613:-:9:PAX5:36923484:-:rev","RNF38--PAX5","ENSG00000137075","ENSG00000196092",5.0,1.0,2.0,1.0,0.892,"NA"]
["TCGA_BLCA","TCGA-GV-A3QK-01B","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",10.0,44.0,40.0,34.0,0.506,0.0146443514644]
["TCGA_BLCA","TCGA-GV-A3QK-01B","11:PPFIA1:70272436:+:11:ANO1:70116458:+:rev","PPFIA1--ANO1","ENSG00000131626","ENSG00000131620",2.0,2.0,2.0,2.0,0.884,"NA"]
["TCGA_BLCA","TCGA-GV-A40E-01A","11:AC069360.1:10899132:-:11:MICALCL:12280933:+:strandcross","AC069360.1--MICALCL","ENSG00000250041","ENSG00000133808",1.0,1.0,1.0,1.0,0.678,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","11:ARHGAP42:100962467:+:11:AP001830.1:102461448:+:reg","ARHGAP42--AP001830.1","ENSG00000165895","ENSG00000255337",13.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-GV-A40E-01A","11:GALNT18:11432621:-:17:BECN1:42823879:-:fusion","GALNT18--BECN1","ENSG00000110328","ENSG00000126581",3.0,1.0,1.0,1.0,0.366,0.00377358490566]
["TCGA_BLCA","TCGA-GV-A40E-01A","17:MGAT5B:76882298:+:15:CYP11A1:74348055:-:fusion","MGAT5B--CYP11A1","ENSG00000167889","ENSG00000140459",18.0,1.0,1.0,1.0,0.780449306677729,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","22:MYH9:36305930:-:22:TRIOBP:37751772:+:strandcross","MYH9--TRIOBP","ENSG00000100345","ENSG00000100106",16.0,1.0,1.0,1.0,0.845403366682859,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","6:DEK:18263843:-:6:KIF25:168029492:+:strandcross","DEK--KIF25","ENSG00000124795","ENSG00000125337",5.0,1.0,1.0,1.0,0.326,0.00377358490566]
["TCGA_BLCA","TCGA-GV-A40E-01A","6:DEK:18263843:-:6:KIF25:168030773:+:strandcross","DEK--KIF25","ENSG00000124795","ENSG00000125337",23.0,1.0,1.0,1.0,0.802139634805262,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","6:MBOAT1:20109598:-:11:TSG101:18481869:-:fusion","MBOAT1--TSG101","ENSG00000172197","ENSG00000074319",2.0,1.0,1.0,1.0,0.891,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","6:NHSL1:138441983:-:11:SLCO2B1:75162655:+:fusion","NHSL1--SLCO2B1","ENSG00000135540","ENSG00000137491",5.0,1.0,1.0,1.0,0.912,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","6:PLAGL1:143968907:-:6:ADGRB3:69324872:+:strandcross","PLAGL1--ADGRB3","ENSG00000118495","ENSG00000135298",3.0,1.0,1.0,1.0,0.828,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","8:PVT1:127890998:+:1:EFNA1:155131339:+:fusion","PVT1--EFNA1","ENSG00000249859","ENSG00000169242",18.0,1.0,1.0,1.0,0.722500017138416,0.00188679245283]
["TCGA_BLCA","TCGA-GV-A40E-01A","5:ETF1:138542833:-:5:AC034243.1:138744762:-:rev","ETF1--AC034243.1","ENSG00000120705","ENSG00000253404",1.0,2.0,2.0,2.0,0.823,"NA"]
["TCGA_BLCA","TCGA-GV-A40G-01A","19:DNM2:10718403:+:12:RERGL:18088956:-:fusion","DNM2--RERGL","ENSG00000079805","ENSG00000111404",2.0,1.0,1.0,1.0,0.861,0.00209205020921]
["TCGA_BLCA","TCGA-GV-A40G-01A","19:ZNF564:12551330:-:19:COL5A3:10001881:-:reg","ZNF564--COL5A3","ENSG00000196826","ENSG00000080573",7.0,1.0,1.0,1.0,0.982,0.0]
["TCGA_BLCA","TCGA-GV-A6ZA-01A","8:NCOA2:70296744:-:8:ALKAL1:52542445:-:reg","NCOA2--ALKAL1","ENSG00000140396","ENSG00000196711",12.0,1.0,1.0,1.0,0.296,0.0146443514644]
["TCGA_BLCA","TCGA-H4-A2HO-01A","3:WDR48:39063190:+:3:PPARG:12312380:+:rev","WDR48--PPARG","ENSG00000114742","ENSG00000132170",3.0,1.0,1.0,1.0,0.844,0.00255754475703]
["TCGA_BLCA","TCGA-H4-A2HO-01A","9:EHMT1:137728529:+:19:PPP1R37:45138514:+:fusion","EHMT1--PPP1R37","ENSG00000181090","ENSG00000104866",15.0,1.0,1.0,1.0,0.814,0.00255754475703]
["TCGA_BLCA","TCGA-H4-A2HO-01A","22:FBLN1:45528009:+:22:UPK3A:45293181:+:rev","FBLN1--UPK3A","ENSG00000077942","ENSG00000100373",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_BLCA","TCGA-H4-A2HQ-01A","16:XPO6:28152659:-:17:DRC3:17973852:+:fusion","XPO6--DRC3","ENSG00000169180","ENSG00000171962",3.0,1.0,1.0,1.0,0.712,0.00161290322581]
["TCGA_BLCA","TCGA-H4-A2HQ-01A","7:AC093668.1:102566997:-:7:ORC5:104136893:-:rev","AC093668.1--ORC5","ENSG00000168255","ENSG00000164815",17.0,1.0,1.0,1.0,0.749841155411816,0.00161290322581]
["TCGA_BLCA","TCGA-H4-A2HQ-01A","16:WWOX:78425055:+:16:NUDT7:77741582:+:rev","WWOX--NUDT7","ENSG00000186153","ENSG00000140876",2.0,1.0,1.0,1.0,0.471,"NA"]
["TCGA_BLCA","TCGA-H4-A2HQ-01A","17:AC087289.3:75917732:-:17:ACOX1:75955947:-:rev","AC087289.3--ACOX1","ENSG00000267426","ENSG00000161533",2.0,1.0,1.0,1.0,0.651,"NA"]
["TCGA_BLCA","TCGA-H4-A2HQ-01A","18:SEC11C:59140035:+:18:NEDD4L:58357194:+:rev","SEC11C--NEDD4L","ENSG00000166562","ENSG00000049759",2.0,1.0,1.0,1.0,0.76,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","12:PTGES3:56687998:-:4:AFF1:87114367:+:fusion","PTGES3--AFF1","ENSG00000110958","ENSG00000172493",2.0,1.0,1.0,1.0,0.743,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","14:STON2:81395894:-:14:AC008056.2:79632391:-:reg","STON2--AC008056.2","ENSG00000140022","ENSG00000259106",2.0,1.0,1.0,1.0,0.825,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","16:RHOT2:668699:+:11:AP001972.4:75133929:-:fusion","RHOT2--AP001972.4","ENSG00000140983","ENSG00000255395",7.0,1.0,1.0,1.0,0.904,0.00524934383202]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","16:RHOT2:670175:+:11:AP001972.4:75133929:-:fusion","RHOT2--AP001972.4","ENSG00000140983","ENSG00000255395",15.0,1.0,1.0,1.0,0.526,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","16:ZNF598:2009524:-:16:C16orf62:19691353:+:strandcross","ZNF598--C16orf62","ENSG00000167962","ENSG00000103544",49.0,1.0,1.0,1.0,0.625410293650128,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","17:TEX2:64171100:-:17:AC005544.1:67020271:-:rev","TEX2--AC005544.1","ENSG00000136478","ENSG00000264491",4.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","19:AC020915.6:58246794:+:19:CCDC61:46003008:+:rev","AC020915.6--CCDC61","ENSG00000198131","ENSG00000104983",14.0,1.0,1.0,1.0,0.699,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","19:ZNF544:58246794:+:19:CCDC61:46003008:+:rev","ZNF544--CCDC61","ENSG00000198131","ENSG00000104983",14.0,1.0,1.0,1.0,0.699,0.0]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","1:SSBP3:54401861:-:X:EDA:69860857:+:fusion","SSBP3--EDA","ENSG00000157216","ENSG00000158813",46.0,1.0,1.0,1.0,0.513030314822762,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","1:SSBP3:54401861:-:X:EDA:69957027:+:fusion","SSBP3--EDA","ENSG00000157216","ENSG00000158813",8.0,1.0,1.0,1.0,0.284,0.0209973753281]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","22:PLXNB2:50281360:-:19:LINC01535:37256727:+:fusion","PLXNB2--LINC01535","ENSG00000196576","ENSG00000226686",3.0,1.0,1.0,1.0,0.712,0.010498687664]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","3:TBC1D5:17742481:-:3:SATB1-AS1:18526387:+:strandcross","TBC1D5--SATB1-AS1","ENSG00000131374","ENSG00000228956",11.0,1.0,1.0,1.0,0.486,0.010498687664]
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["TCGA_BLCA","TCGA-HQ-A2OE-01A","1:GNPAT:231251143:+:1:TRIM67:231208947:+:rev","GNPAT--TRIM67","ENSG00000116906","ENSG00000119283",4.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","3:OPA1:193658995:+:3:ATP13A4-AS1:193554770:+:rev","OPA1--ATP13A4-AS1","ENSG00000198836","ENSG00000225473",4.0,1.0,1.0,1.0,0.546,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","8:EPHX2:27518072:+:8:PTK2B:27450749:+:rev","EPHX2--PTK2B","ENSG00000120915","ENSG00000120899",9.0,1.0,1.0,1.0,0.945,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","8:WWP1:86402203:+:8:AC084128.1:86186647:+:rev","WWP1--AC084128.1","ENSG00000123124","ENSG00000253699",4.0,1.0,1.0,1.0,0.492,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OE-01A","8:WWP1:86402203:+:8:AC084128.1:86200141:+:rev","WWP1--AC084128.1","ENSG00000123124","ENSG00000253699",2.0,1.0,1.0,1.0,0.923,"NA"]
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["TCGA_BLCA","TCGA-HQ-A2OE-01A","9:EHMT1:137619049:+:9:ARRDC1:137612896:+:rev","EHMT1--ARRDC1","ENSG00000181090","ENSG00000197070",5.0,6.0,5.0,5.0,0.939,"NA"]
["TCGA_BLCA","TCGA-HQ-A2OF-01A","17:AC018521.5:47895703:-:17:CNTD1:42806674:+:strandcross","AC018521.5--CNTD1","ENSG00000264920","ENSG00000176563",7.0,1.0,1.0,1.0,0.998,0.0]
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["TCGA_BLCA","TCGA-HQ-A2OF-01A","17:TADA2A:37407496:+:17:PLXDC1:39083540:-:strandcross","TADA2A--PLXDC1","ENSG00000276234","ENSG00000161381",6.0,1.0,1.0,1.0,0.701,0.0]
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["TCGA_BLCA","TCGA-HQ-A5ND-01A","11:SORL1:121627767:+:11:DISC1FP1:90801766:+:rev","SORL1--DISC1FP1","ENSG00000137642","ENSG00000261645",3.0,1.0,1.0,1.0,0.278,0.0195599022005]
["TCGA_BLCA","TCGA-HQ-A5NE-01A","13:RB1:48307406:+:13:WDFY2:51751310:+:reg","RB1--WDFY2","ENSG00000139687","ENSG00000139668",4.0,1.0,1.0,1.0,0.399,0.0102827763496]
["TCGA_BLCA","TCGA-HQ-A5NE-01A","X:IL9R:155997787:+:X:VAMP7:155919813:+:rev","IL9R--VAMP7","ENSG00000124334","ENSG00000124333",2.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_BLCA","TCGA-K4-A3WS-01A","X:PHF8:54017661:-:17:LINC01483:69845440:+:fusion","PHF8--LINC01483","ENSG00000172943","ENSG00000227517",6.0,1.0,1.0,1.0,0.539,0.00793650793651]
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["TCGA_BLCA","TCGA-K4-A3WU-01B","12:ZCCHC8:122499973:-:17:TOP3A:18292852:-:fusion","ZCCHC8--TOP3A","ENSG00000033030","ENSG00000177302",29.0,1.0,1.0,1.0,0.553658895751434,0.00541516245487]
["TCGA_BLCA","TCGA-K4-A3WU-01B","14:DHRS2:23630235:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",6.0,4.0,4.0,3.0,0.427,0.0072202166065]
["TCGA_BLCA","TCGA-K4-A3WU-01B","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",8.0,44.0,40.0,34.0,0.581,0.00541516245487]
["TCGA_BLCA","TCGA-K4-A3WU-01B","14:NUMB:73409937:-:14:AC005520.2:73789027:+:strandcross","NUMB--AC005520.2","ENSG00000133961","ENSG00000259065",18.0,1.0,1.0,1.0,0.868639461725795,0.00361010830325]
["TCGA_BLCA","TCGA-K4-A3WU-01B","14:NUMB:73409937:-:14:AC005520.2:73802885:+:strandcross","NUMB--AC005520.2","ENSG00000133961","ENSG00000259065",3.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BLCA","TCGA-K4-A3WU-01B","17:ST6GALNAC2:76578756:-:17:BRIP1:61743134:-:reg","ST6GALNAC2--BRIP1","ENSG00000070731","ENSG00000136492",2.0,1.0,1.0,1.0,0.717,0.00361010830325]
["TCGA_BLCA","TCGA-K4-A3WU-01B","17:TOP3A:18294703:-:12:ZCCHC8:122492789:-:fusion","TOP3A--ZCCHC8","ENSG00000177302","ENSG00000033030",3.0,1.0,1.0,1.0,0.927,0.00180505415162]
["TCGA_BLCA","TCGA-K4-A3WU-01B","2:GPR75-ASB3:53750783:-:2:AC007402.1:51762089:+:strandcross","GPR75-ASB3--AC007402.1","ENSG00000115239","ENSG00000231918",2.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BLCA","TCGA-K4-A3WU-01B","4:HPGD:174521944:-:4:GUCY1A3:155708236:+:strandcross","HPGD--GUCY1A3","ENSG00000164120","ENSG00000164116",17.0,1.0,1.0,1.0,0.165578222153467,0.0324909747292]
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["TCGA_BLCA","TCGA-K4-A3WV-01A","12:CHFR:132841518:-:17:UBB:16381902:+:fusion","CHFR--UBB","ENSG00000072609","ENSG00000170315",2.0,1.0,1.0,1.0,0.614,0.00551470588235]
["TCGA_BLCA","TCGA-K4-A3WV-01A","22:CRKL:20934244:+:11:AC124657.1:30044455:-:fusion","CRKL--AC124657.1","ENSG00000099942","ENSG00000254532",12.0,1.0,1.0,1.0,0.695,0.00367647058824]
["TCGA_BLCA","TCGA-K4-A3WV-01A","5:GRAMD3:126488892:+:5:TMEM161B-AS1:88417187:+:rev","GRAMD3--TMEM161B-AS1","ENSG00000155324","ENSG00000247828",5.0,1.0,1.0,1.0,0.983,0.0]
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["TCGA_BLCA","TCGA-K4-A3WV-01A","6:JARID2:15374252:+:6:PPP1R10:30616998:-:strandcross","JARID2--PPP1R10","ENSG00000008083","ENSG00000204569",54.0,1.0,1.0,1.0,0.896921602414576,0.0]
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["TCGA_BLCA","TCGA-K4-A3WV-01A","8:AC090809.1:36701821:-:8:ADAM2:39824897:-:rev","AC090809.1--ADAM2","ENSG00000253363","ENSG00000104755",22.0,1.0,1.0,1.0,0.342409743525831,0.00551470588235]
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["TCGA_BLCA","TCGA-K4-A3WV-01A","21:MORC3:36338921:+:21:DOPEY2:36277021:+:rev","MORC3--DOPEY2","ENSG00000159256","ENSG00000142197",2.0,1.0,1.0,1.0,0.66,"NA"]
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["TCGA_BLCA","TCGA-K4-A3WV-01A","7:BRAF:140924566:-:7:MRPS33:141006535:-:rev","BRAF--MRPS33","ENSG00000157764","ENSG00000090263",3.0,5.0,4.0,3.0,0.855,"NA"]
["TCGA_BLCA","TCGA-K4-A3WV-01A","7:BRAF:140924566:-:7:MRPS33:141010660:-:rev","BRAF--MRPS33","ENSG00000157764","ENSG00000090263",2.0,4.0,4.0,4.0,0.682,"NA"]
["TCGA_BLCA","TCGA-K4-A3WV-01A","X:SEPT6:119629318:-:X:CUL4B:120574630:-:rev","SEPT6--CUL4B","ENSG00000125354","ENSG00000158290",1.0,1.0,1.0,1.0,0.906,"NA"]
["TCGA_BLCA","TCGA-K4-A4AB-01B","3:SPTSSB:161359802:-:3:AC074033.2:169463944:+:strandcross","SPTSSB--AC074033.2","ENSG00000196542","ENSG00000241479",9.0,1.0,1.0,1.0,0.874,0.0]
["TCGA_BLCA","TCGA-K4-A4AC-01A","13:SLC7A1:29553761:-:13:CDX2:27965015:-:reg","SLC7A1--CDX2","ENSG00000139514","ENSG00000165556",26.0,1.0,1.0,1.0,0.911281088675516,0.00218340611354]
["TCGA_BLCA","TCGA-K4-A4AC-01A","17:EPN2:19237531:+:17:MAP2K3:21298413:+:reg","EPN2--MAP2K3","ENSG00000072134","ENSG00000034152",24.0,1.0,1.0,1.0,0.844906319365956,0.00436681222707]
["TCGA_BLCA","TCGA-K4-A4AC-01A","6:CDKAL1:20548705:+:6:NBAT1:22136669:-:strandcross","CDKAL1--NBAT1","ENSG00000145996","ENSG00000260455",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-K4-A4AC-01A","8:VPS13B:99442635:+:8:BAALC-AS2:103133369:-:strandcross","VPS13B--BAALC-AS2","ENSG00000132549","ENSG00000236939",21.0,1.0,1.0,1.0,0.550705998592254,0.00655021834061]
["TCGA_BLCA","TCGA-K4-A4AC-01A","19:FBXO46:45730849:-:19:DMPK:45775034:-:rev","FBXO46--DMPK","ENSG00000177051","ENSG00000104936",2.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BLCA","TCGA-K4-A4AC-01A","19:GPX4:1104127:+:19:WDR18:994020:+:rev","GPX4--WDR18","ENSG00000167468","ENSG00000065268",1.0,1.0,1.0,1.0,0.927,"NA"]
["TCGA_BLCA","TCGA-K4-A54R-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,44.0,40.0,34.0,0.286,0.00347222222222]
["TCGA_BLCA","TCGA-K4-A54R-01A","17:TBCD:82809782:+:17:FOXK2:82563354:+:rev","TBCD--FOXK2","ENSG00000141556","ENSG00000141568",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-K4-A5RH-01A","13:COG6:39665154:+:13:DLEU1:50492651:+:reg","COG6--DLEU1","ENSG00000133103","ENSG00000176124",17.0,1.0,1.0,1.0,0.893440656561143,0.00157728706625]
["TCGA_BLCA","TCGA-K4-A5RH-01A","13:COG6:39665154:+:13:DLEU1:50527866:+:reg","COG6--DLEU1","ENSG00000133103","ENSG00000176124",6.0,1.0,1.0,1.0,0.472,0.00315457413249]
["TCGA_BLCA","TCGA-K4-A5RH-01A","17:MPRIP:17042971:+:17:TOM1L2:17848859:-:strandcross","MPRIP--TOM1L2","ENSG00000133030","ENSG00000175662",5.0,1.0,1.0,1.0,0.408,0.00473186119874]
["TCGA_BLCA","TCGA-K4-A5RH-01A","17:MPRIP:17042971:+:17:TOM1L2:17850952:-:strandcross","MPRIP--TOM1L2","ENSG00000133030","ENSG00000175662",18.0,1.0,1.0,1.0,0.689616867654704,0.00157728706625]
["TCGA_BLCA","TCGA-K4-A5RH-01A","17:SREBF1:17836727:-:17:MED9:17491279:+:strandcross","SREBF1--MED9","ENSG00000072310","ENSG00000141026",11.0,1.0,1.0,1.0,0.687,0.00157728706625]
["TCGA_BLCA","TCGA-K4-A5RH-01A","1:ARHGEF2:155978365:-:1:S100A7:153459030:-:reg","ARHGEF2--S100A7","ENSG00000116584","ENSG00000143556",511.0,1.0,1.0,1.0,0.999969757677379,0.0]
["TCGA_BLCA","TCGA-K4-A5RH-01A","1:ARHGEF2:155978913:-:1:S100A7:153459030:-:reg","ARHGEF2--S100A7","ENSG00000116584","ENSG00000143556",10.0,1.0,1.0,1.0,0.772,0.00157728706625]
["TCGA_BLCA","TCGA-K4-A5RH-01A","1:ARHGEF2:155983107:-:1:S100A7:153459030:-:reg","ARHGEF2--S100A7","ENSG00000116584","ENSG00000143556",111.0,1.0,1.0,1.0,0.95968182499949,0.0]
["TCGA_BLCA","TCGA-K4-A5RH-01A","22:PI4KA:20752903:-:18:TTC39C:24114554:+:fusion","PI4KA--TTC39C","ENSG00000241973","ENSG00000168234",5.0,1.0,1.0,1.0,0.364,0.00552050473186]
["TCGA_BLCA","TCGA-K4-A5RH-01A","8:PRKDC:47849154:-:17:AC138207.1:30956604:-:fusion","PRKDC--AC138207.1","ENSG00000253729","ENSG00000230113",23.0,1.0,1.0,1.0,0.503724992096384,0.00315457413249]
["TCGA_BLCA","TCGA-K4-A5RH-01A","9:MAPKAP1:125657651:-:14:LINC02311:81734854:-:fusion","MAPKAP1--LINC02311","ENSG00000119487","ENSG00000258718",4.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_BLCA","TCGA-K4-A5RH-01A","9:MAPKAP1:125657651:-:14:LINC02311:81740276:-:fusion","MAPKAP1--LINC02311","ENSG00000119487","ENSG00000258718",4.0,1.0,1.0,1.0,0.373,0.00552050473186]
["TCGA_BLCA","TCGA-K4-A5RH-01A","15:TSPAN3:77070892:-:15:TBC1D2B:78030170:-:rev","TSPAN3--TBC1D2B","ENSG00000140391","ENSG00000167202",2.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_BLCA","TCGA-K4-A5RI-01A","17:TTC19:16006568:+:17:NCOR1:16040491:-:strandcross","TTC19--NCOR1","ENSG00000011295","ENSG00000141027",3.0,2.0,1.0,1.0,0.961,0.0]
["TCGA_BLCA","TCGA-K4-A5RI-01A","21:RWDD2B:29019211:-:21:MX2:41390565:+:strandcross","RWDD2B--MX2","ENSG00000156253","ENSG00000183486",8.0,1.0,1.0,1.0,0.98,0.0]
["TCGA_BLCA","TCGA-K4-A5RI-01A","21:RWDD2B:29019211:-:21:MX2:41395587:+:strandcross","RWDD2B--MX2","ENSG00000156253","ENSG00000183486",4.0,1.0,1.0,1.0,0.555,0.014880952381]
["TCGA_BLCA","TCGA-K4-A6FZ-01A","8:TACC1:38825368:+:8:RAB11FIP1:37863113:-:strandcross","TACC1--RAB11FIP1","ENSG00000147526","ENSG00000156675",5.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BLCA","TCGA-K4-A6MB-01A","8:HOOK3:42925629:+:8:BAALC:103200658:+:reg","HOOK3--BAALC","ENSG00000168172","ENSG00000164929",14.0,1.0,1.0,1.0,0.678,0.00584795321637]
["TCGA_BLCA","TCGA-K4-A6MB-01A","8:HOOK3:42925629:+:8:BAALC:103212919:+:reg","HOOK3--BAALC","ENSG00000168172","ENSG00000164929",31.0,1.0,1.0,1.0,0.880159475792102,0.00292397660819]
["TCGA_BLCA","TCGA-K4-A6MB-01A","8:HOOK3:42925629:+:8:BAALC:103227989:+:reg","HOOK3--BAALC","ENSG00000168172","ENSG00000164929",7.0,1.0,1.0,1.0,0.933,0.00292397660819]
["TCGA_BLCA","TCGA-K4-A6MB-01A","9:PTGR1:111594222:-:1:LIX1L-AS1:145941112:+:fusion","PTGR1--LIX1L-AS1","ENSG00000106853","ENSG00000234222",2.0,1.0,1.0,1.0,0.746,0.00292397660819]
["TCGA_BLCA","TCGA-K4-A6MB-01A","10:GRID1:86363941:-:10:GLUD1:87076656:-:rev","GRID1--GLUD1","ENSG00000182771","ENSG00000148672",9.0,2.0,1.0,1.0,0.468,"NA"]
["TCGA_BLCA","TCGA-K4-A6MB-01A","1:DIEXF:209831043:+:1:TRAF3IP3:209772948:+:rev","DIEXF--TRAF3IP3","ENSG00000117597","ENSG00000009790",7.0,1.0,1.0,1.0,0.652,"NA"]
["TCGA_BLCA","TCGA-K4-A6MB-01A","1:FBXO42:16352255:-:1:SPATA21:16405104:-:rev","FBXO42--SPATA21","ENSG00000037637","ENSG00000187144",3.0,1.0,1.0,1.0,0.594,"NA"]
["TCGA_BLCA","TCGA-K4-A6MB-01A","8:SNX31:100649274:-:8:PABPC1:100686294:-:rev","SNX31--PABPC1","ENSG00000174226","ENSG00000070756",3.0,1.0,1.0,1.0,0.769,"NA"]
["TCGA_BLCA","TCGA-K4-A83P-01A","10:LRMDA:75438494:+:10:ADK:74394141:+:rev","LRMDA--ADK","ENSG00000148655","ENSG00000156110",5.0,1.0,2.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-K4-A83P-01A","16:LUC7L:199062:-:4:CORIN:47665263:-:fusion","LUC7L--CORIN","ENSG00000007392","ENSG00000145244",6.0,1.0,1.0,1.0,0.827,0.00913242009132]
["TCGA_BLCA","TCGA-K4-A83P-01A","22:SBF1:50454512:-:22:FBLN1:45542155:+:strandcross","SBF1--FBLN1","ENSG00000100241","ENSG00000077942",5.0,1.0,1.0,1.0,0.979,0.00228310502283]
["TCGA_BLCA","TCGA-K4-A83P-01A","4:NOA1:56968384:-:4:ATP10D:47523012:+:strandcross","NOA1--ATP10D","ENSG00000084092","ENSG00000145246",2.0,1.0,1.0,1.0,0.246,0.0205479452055]
["TCGA_BLCA","TCGA-K4-A83P-01A","15:MAP2K5:67600749:+:15:C15orf61:67526418:+:rev","MAP2K5--C15orf61","ENSG00000137764","ENSG00000189227",2.0,1.0,1.0,1.0,0.888,"NA"]
["TCGA_BLCA","TCGA-K4-A83P-01A","17:RFFL:35089105:-:17:RAD51D:35103544:-:rev","RFFL--RAD51D","ENSG00000092871","ENSG00000267618",4.0,1.0,1.0,1.0,0.933,"NA"]
["TCGA_BLCA","TCGA-K4-A83P-01A","18:ZNF236:76928106:+:18:LINC00908:76610845:+:rev","ZNF236--LINC00908","ENSG00000130856","ENSG00000263812",4.0,1.0,1.0,1.0,0.605,"NA"]
["TCGA_BLCA","TCGA-K4-A83P-01A","1:PEX14:10536297:+:1:PGD:10418826:+:rev","PEX14--PGD","ENSG00000142655","ENSG00000142657",3.0,1.0,1.0,1.0,0.568,"NA"]
["TCGA_BLCA","TCGA-K4-A83P-01A","3:ARL8B:5122588:+:3:ITPR1:4766530:+:rev","ARL8B--ITPR1","ENSG00000134108","ENSG00000150995",7.0,1.0,1.0,1.0,0.682,"NA"]
["TCGA_BLCA","TCGA-K4-AAQO-01A","16:CLEC16A:10944797:+:16:AC009135.2:5867303:+:rev","CLEC16A--AC009135.2","ENSG00000038532","ENSG00000279877",3.0,1.0,1.0,1.0,0.797,0.0193236714976]
["TCGA_BLCA","TCGA-K4-AAQO-01A","19:ZNF570:37476434:+:19:AC008982.1:38831516:-:strandcross","ZNF570--AC008982.1","ENSG00000171827","ENSG00000104823",9.0,1.0,1.0,1.0,0.295,0.0821256038647]
["TCGA_BLCA","TCGA-K4-AAQO-01A","2:CNNM4:96762401:+:2:NEURL3:96500924:-:strandcross","CNNM4--NEURL3","ENSG00000158158","ENSG00000163121",3.0,1.0,1.0,1.0,0.691,0.0338164251208]
["TCGA_BLCA","TCGA-KQ-A41O-01A","11:ARAP1:72692753:-:11:SLC22A8:63014962:-:reg","ARAP1--SLC22A8","ENSG00000186635","ENSG00000149452",2.0,1.0,1.0,1.0,0.882,0.0]
["TCGA_BLCA","TCGA-KQ-A41P-01A","2:STARD7:96193242:-:3:LRRN1:3844364:+:fusion","STARD7--LRRN1","ENSG00000084090","ENSG00000175928",3.0,1.0,1.0,1.0,0.225,0.012987012987]
["TCGA_BLCA","TCGA-KQ-A41P-01A","3:SLC6A6:14416453:+:3:LSM3:14198036:+:rev","SLC6A6--LSM3","ENSG00000131389","ENSG00000170860",2.0,1.0,1.0,1.0,0.606,"NA"]
["TCGA_BLCA","TCGA-KQ-A41Q-01A","12:FAR2:29321924:+:7:AGMO:15201359:-:fusion","FAR2--AGMO","ENSG00000064763","ENSG00000187546",6.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BLCA","TCGA-KQ-A41Q-01A","14:STXBP6:24974665:-:6:SLC44A4:31877082:-:fusion","STXBP6--SLC44A4","ENSG00000168952","ENSG00000204385",9.0,1.0,1.0,1.0,0.34,0.00771208226221]
["TCGA_BLCA","TCGA-KQ-A41Q-01A","20:YWHAB:44885886:+:7:ISPD:16308627:-:fusion","YWHAB--ISPD","ENSG00000166913","ENSG00000214960",1.0,1.0,1.0,1.0,0.875,0.0]
["TCGA_BLCA","TCGA-KQ-A41Q-01A","20:YWHAB:44885886:+:7:ISPD:16376241:-:fusion","YWHAB--ISPD","ENSG00000166913","ENSG00000214960",9.0,1.0,1.0,1.0,0.855,0.0]
["TCGA_BLCA","TCGA-KQ-A41Q-01A","8:PTK2:140743230:-:8:VPS13B:99661354:+:strandcross","PTK2--VPS13B","ENSG00000169398","ENSG00000132549",6.0,1.0,1.0,1.0,0.532,0.00514138817481]
["TCGA_BLCA","TCGA-KQ-A41R-01A","22:PI4KA:20834562:-:14:AC008056.2:79632391:-:fusion","PI4KA--AC008056.2","ENSG00000241973","ENSG00000259106",3.0,1.0,1.0,1.0,0.205,0.0135135135135]
["TCGA_BLCA","TCGA-KQ-A41R-01A","5:MAST4:67005085:+:5:TERT:1282624:-:strandcross","MAST4--TERT","ENSG00000069020","ENSG00000164362",3.0,1.0,1.0,1.0,0.816,0.00900900900901]
["TCGA_BLCA","TCGA-KQ-A41R-01A","6:JARID2:15410365:+:6:CDKAL1:20649293:+:reg","JARID2--CDKAL1","ENSG00000008083","ENSG00000145996",6.0,1.0,1.0,1.0,0.577,0.00900900900901]
["TCGA_BLCA","TCGA-KQ-A41R-01A","11:RNH1:507113:-:11:CHID1:884169:-:rev","RNH1--CHID1","ENSG00000023191","ENSG00000177830",1.0,1.0,1.0,1.0,0.805,"NA"]
["TCGA_BLCA","TCGA-KQ-A41S-01A","18:ADNP2:80117650:+:5:AC113386.1:31095641:-:fusion","ADNP2--AC113386.1","ENSG00000101544","ENSG00000254138",4.0,1.0,1.0,1.0,0.805,0.00523560209424]
["TCGA_BLCA","TCGA-LC-A66R-01A","10:RSU1:16816973:-:8:BAALC:103212919:+:fusion","RSU1--BAALC","ENSG00000148484","ENSG00000164929",8.0,1.0,1.0,1.0,0.413,0.00751879699248]
["TCGA_BLCA","TCGA-LC-A66R-01A","17:YWHAE:1400047:-:17:RPH3AL:327579:-:reg","YWHAE--RPH3AL","ENSG00000108953","ENSG00000181031",7.0,1.0,1.0,1.0,0.607,0.00501253132832]
["TCGA_BLCA","TCGA-LC-A66R-01A","3:MBNL1:152269092:+:21:AP000317.2:34293681:+:fusion","MBNL1--AP000317.2","ENSG00000152601","ENSG00000272657",5.0,1.0,1.0,1.0,0.661,0.00501253132832]
["TCGA_BLCA","TCGA-LC-A66R-01A","3:MBNL1:152300367:+:21:AP000317.1:34324736:+:fusion","MBNL1--AP000317.1","ENSG00000152601","ENSG00000214955",3.0,1.0,1.0,1.0,0.937,0.00250626566416]
["TCGA_BLCA","TCGA-LC-A66R-01A","3:MBNL1:152300367:+:21:AP000317.2:34293681:+:fusion","MBNL1--AP000317.2","ENSG00000152601","ENSG00000272657",7.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BLCA","TCGA-LC-A66R-01A","8:FZD6:103300284:+:8:DPYS:104381314:-:strandcross","FZD6--DPYS","ENSG00000164930","ENSG00000147647",4.0,1.0,1.0,1.0,0.418,0.00751879699248]
["TCGA_BLCA","TCGA-LC-A66R-01A","8:FZD6:103300284:+:8:DPYS:104392991:-:strandcross","FZD6--DPYS","ENSG00000164930","ENSG00000147647",42.0,1.0,1.0,1.0,0.878206443607117,0.00250626566416]
["TCGA_BLCA","TCGA-LT-A5Z6-01A","4:CCSER1:90400129:+:4:BMP2K:78833582:+:rev","CCSER1--BMP2K","ENSG00000184305","ENSG00000138756",8.0,1.0,1.0,1.0,0.812,0.0]
["TCGA_BLCA","TCGA-LT-A8JT-01A","8:ADAM9:39071403:+:11:TESMIN:68715939:-:fusion","ADAM9--TESMIN","ENSG00000168615","ENSG00000132749",4.0,1.0,1.0,1.0,0.692,0.00319488817891]
["TCGA_BLCA","TCGA-MV-A51V-01A","X:ARHGEF9:63655494:-:17:MSI2:57401379:+:fusion","ARHGEF9--MSI2","ENSG00000131089","ENSG00000153944",2.0,1.0,1.0,1.0,0.814,0.00416666666667]
["TCGA_BLCA","TCGA-MV-A51V-01A","19:AC007785.3:46028258:+:19:CCDC61:46015049:+:rev","AC007785.3--CCDC61","ENSG00000268401","ENSG00000104983",1.0,1.0,1.0,1.0,0.83,"NA"]
["TCGA_BLCA","TCGA-PQ-A6FI-01A","4:CLCN3:169680207:+:4:TDO2:155917395:+:rev","CLCN3--TDO2","ENSG00000109572","ENSG00000151790",21.0,1.0,1.0,1.0,0.761553615130736,0.00253164556962]
["TCGA_BLCA","TCGA-PQ-A6FI-01A","6:NUP153:17646067:-:6:DTNBP1:15524669:-:reg","NUP153--DTNBP1","ENSG00000124789","ENSG00000047579",161.0,1.0,1.0,1.0,0.996699092775729,0.00126582278481]
["TCGA_BLCA","TCGA-PQ-A6FI-01A","17:RPS6KB1:59914703:+:17:VMP1:59838295:+:rev","RPS6KB1--VMP1","ENSG00000108443","ENSG00000062716",35.0,7.0,4.0,3.0,0.967324665263176,"NA"]
["TCGA_BLCA","TCGA-PQ-A6FN-01A","1:GNPAT:231241456:+:1:CAPN9:230787522:+:rev","GNPAT--CAPN9","ENSG00000116906","ENSG00000135773",2.0,1.0,1.0,1.0,0.931,"NA"]
["TCGA_BLCA","TCGA-PQ-A6FN-01A","1:GNPAT:231251143:+:1:CAPN9:230787522:+:rev","GNPAT--CAPN9","ENSG00000116906","ENSG00000135773",8.0,1.0,1.0,1.0,0.526,"NA"]
["TCGA_BLCA","TCGA-PQ-A6FN-01A","1:GNPAT:231251143:+:1:CAPN9:230790132:+:rev","GNPAT--CAPN9","ENSG00000116906","ENSG00000135773",1.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_BLCA","TCGA-PQ-A6FN-01A","22:MED15:20568631:+:22:TANGO2:20036760:+:rev","MED15--TANGO2","ENSG00000099917","ENSG00000183597",1.0,1.0,1.0,1.0,0.893,"NA"]
["TCGA_BLCA","TCGA-R3-A69X-01A","16:UQCRC2:21957566:+:1:CYB5RL:54179352:-:fusion","UQCRC2--CYB5RL","ENSG00000140740","ENSG00000215883",14.0,1.0,1.0,1.0,0.253,0.0183727034121]
["TCGA_BLCA","TCGA-S5-A6DX-01A","12:AC090502.1:74285025:-:12:LINC02442:67571305:-:reg","AC090502.1--LINC02442","ENSG00000251138","ENSG00000256077",40.0,1.0,1.0,1.0,0.675964452208099,0.00236406619385]
["TCGA_BLCA","TCGA-S5-A6DX-01A","12:AC090502.1:74285025:-:12:LINC02442:67587306:-:reg","AC090502.1--LINC02442","ENSG00000251138","ENSG00000256077",19.0,1.0,1.0,1.0,0.885465181768785,0.00236406619385]
["TCGA_BLCA","TCGA-S5-A6DX-01A","12:FRS2:69470530:+:12:LACRT:54633233:-:strandcross","FRS2--LACRT","ENSG00000166225","ENSG00000135413",7.0,1.0,1.0,1.0,0.976,0.00236406619385]
["TCGA_BLCA","TCGA-S5-A6DX-01A","12:MDM2:68809292:+:1:UBE2J2:1263386:-:fusion","MDM2--UBE2J2","ENSG00000135679","ENSG00000160087",3.0,1.0,1.0,1.0,0.894,0.0]
["TCGA_BLCA","TCGA-S5-A6DX-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.947,0.00236406619385]
["TCGA_BLCA","TCGA-S5-A6DX-01A","17:GRN:44350800:+:8:ZC3H3:143484947:-:fusion","GRN--ZC3H3","ENSG00000030582","ENSG00000014164",76.0,1.0,1.0,1.0,0.923139683715027,0.00236406619385]
["TCGA_BLCA","TCGA-S5-A6DX-01A","8:ASAP1:130214556:-:5:ADCY2:7784365:+:fusion","ASAP1--ADCY2","ENSG00000153317","ENSG00000078295",5.0,1.0,1.0,1.0,0.378,0.00472813238771]
["TCGA_BLCA","TCGA-S5-A6DX-01A","19:RPS11:49498046:+:19:RPL13A:49491729:+:rev","RPS11--RPL13A","ENSG00000142534","ENSG00000142541",3.0,1.0,1.0,1.0,0.838,"NA"]
["TCGA_BLCA","TCGA-SY-A9G0-01A","8:TRIM35:27298464:-:14:CCNB1IP1:20329373:-:fusion","TRIM35--CCNB1IP1","ENSG00000104228","ENSG00000100814",4.0,1.0,1.0,1.0,0.834,0.00900900900901]
["TCGA_BLCA","TCGA-SY-A9G5-01A","19:GPI:34399631:+:19:HKR1:37369179:+:reg","GPI--HKR1","ENSG00000105220","ENSG00000181666",39.0,1.0,1.0,1.0,0.943613577996708,0.00358422939068]
["TCGA_BLCA","TCGA-SY-A9G5-01A","6:EXOC2:693019:-:6:OOEP:73369385:-:rev","EXOC2--OOEP","ENSG00000112685","ENSG00000203907",10.0,1.0,1.0,1.0,0.666,0.00716845878136]
["TCGA_BLCA","TCGA-SY-A9G5-01A","6:EXOC2:693019:-:6:OOEP:73394488:-:rev","EXOC2--OOEP","ENSG00000112685","ENSG00000203907",5.0,1.0,1.0,1.0,0.42,0.00716845878136]
["TCGA_BLCA","TCGA-SY-A9G5-01A","6:TAF8:42066459:+:6:HFE:26090841:+:rev","TAF8--HFE","ENSG00000137413","ENSG00000010704",14.0,1.0,1.0,1.0,0.971,0.00358422939068]
["TCGA_BLCA","TCGA-SY-A9G5-01A","2:TBC1D8:101021681:-:2:RNF149:101282057:-:rev","TBC1D8--RNF149","ENSG00000204634","ENSG00000163162",3.0,1.0,1.0,1.0,0.821,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","5:MAP3K1:56859915:+:14:OR4N2:19733369:+:fusion","MAP3K1--OR4N2","ENSG00000095015","ENSG00000176294",5.0,1.0,1.0,1.0,0.251,0.0214765100671]
["TCGA_BLCA","TCGA-UY-A78K-01A","19:BRD4:15332290:-:19:PGLYRP2:15469929:-:rev","BRD4--PGLYRP2","ENSG00000141867","ENSG00000161031",13.0,1.0,1.0,1.0,0.889,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","1:ABCD3:94506642:+:1:AC097059.1:94333309:+:rev","ABCD3--AC097059.1","ENSG00000117528","ENSG00000226835",4.0,2.0,1.0,1.0,0.615,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","22:DGCR8:20080383:+:22:COMT:19962527:+:rev","DGCR8--COMT","ENSG00000128191","ENSG00000093010",11.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","2:MGAT4A:98726239:-:2:KIAA1211L:98846810:-:rev","MGAT4A--KIAA1211L","ENSG00000071073","ENSG00000196872",6.0,5.0,5.0,4.0,0.507,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","3:MKRN2:12557176:+:3:PPARG:12312380:+:rev","MKRN2--PPARG","ENSG00000075975","ENSG00000132170",7.0,2.0,1.0,1.0,0.863,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","3:MKRN2:12557176:+:3:PPARG:12379704:+:rev","MKRN2--PPARG","ENSG00000075975","ENSG00000132170",2.0,2.0,1.0,1.0,0.416,"NA"]
["TCGA_BLCA","TCGA-UY-A78K-01A","5:AC008695.1:131744564:-:5:ACSL6:131962678:-:rev","AC008695.1--ACSL6","ENSG00000273217","ENSG00000281938",5.0,1.0,1.0,1.0,0.99,"NA"]
["TCGA_BLCA","TCGA-UY-A78L-01A","12:RNF41:56213958:-:12:MSRB3:65308529:+:strandcross","RNF41--MSRB3","ENSG00000181852","ENSG00000174099",3.0,1.0,1.0,1.0,0.958,0.0025641025641]
["TCGA_BLCA","TCGA-UY-A78M-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",5.0,44.0,40.0,34.0,0.889,0.0]
["TCGA_BLCA","TCGA-UY-A78M-01A","19:PSMC4:39971238:+:19:AC004784.1:42977463:+:reg","PSMC4--AC004784.1","ENSG00000013275","ENSG00000282943",3.0,1.0,1.0,1.0,0.546,0.00571428571429]
["TCGA_BLCA","TCGA-UY-A78M-01A","8:UBR5:102412173:-:8:AP002852.2:102529311:+:strandcross","UBR5--AP002852.2","ENSG00000104517","ENSG00000253633",19.0,1.0,1.0,1.0,0.418385233646711,0.00857142857143]
["TCGA_BLCA","TCGA-UY-A78M-01A","8:UBR5:102412173:-:8:ODF1:102560452:+:strandcross","UBR5--ODF1","ENSG00000104517","ENSG00000155087",143.0,2.0,1.0,1.0,0.998947520274085,0.0]
["TCGA_BLCA","TCGA-UY-A78M-01A","12:TMEM120B:121712964:+:12:ORAI1:121641041:+:rev","TMEM120B--ORAI1","ENSG00000188735","ENSG00000276045",4.0,2.0,3.0,2.0,0.722,"NA"]
["TCGA_BLCA","TCGA-UY-A78M-01A","4:COX7B2:46844960:-:4:CORIN:47807047:-:rev","COX7B2--CORIN","ENSG00000170516","ENSG00000145244",2.0,1.0,2.0,1.0,1.0,"NA"]
["TCGA_BLCA","TCGA-UY-A78N-01A","13:MYCBP2:77288161:-:13:CPB2:46064741:-:reg","MYCBP2--CPB2","ENSG00000005810","ENSG00000080618",20.0,1.0,1.0,1.0,0.592774399558793,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:EPS15:51468473:-:1:CCDC18:93210802:+:strandcross","EPS15--CCDC18","ENSG00000085832","ENSG00000122483",3.0,1.0,1.0,1.0,0.835,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:FAF1:50655442:-:1:CHIA:111314540:+:strandcross","FAF1--CHIA","ENSG00000185104","ENSG00000134216",2.0,1.0,1.0,1.0,0.618,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:PRUNE1:151017904:+:1:LCE2A:152698882:+:reg","PRUNE1--LCE2A","ENSG00000143363","ENSG00000187173",50.0,1.0,1.0,1.0,0.756943407136054,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:PRUNE1:151017904:+:1:LCE4A:152708160:+:reg","PRUNE1--LCE4A","ENSG00000143363","ENSG00000187170",33.0,1.0,1.0,1.0,0.704438861507523,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:PRUNE1:151018669:+:1:LCE2A:152698882:+:reg","PRUNE1--LCE2A","ENSG00000143363","ENSG00000187173",9.0,1.0,1.0,1.0,0.321,0.0040733197556]
["TCGA_BLCA","TCGA-UY-A78N-01A","1:TRABD2B:47994034:-:1:FAF1:50584811:-:rev","TRABD2B--FAF1","ENSG00000269113","ENSG00000185104",2.0,1.0,1.0,1.0,0.52,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","20:ITCH:34481206:+:20:ARFGAP1:63282819:+:reg","ITCH--ARFGAP1","ENSG00000078747","ENSG00000101199",13.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-UY-A78N-01A","22:DGCR2:19063202:-:1:SERINC2:31432967:+:fusion","DGCR2--SERINC2","ENSG00000070413","ENSG00000168528",3.0,1.0,1.0,1.0,0.797,0.0]
["TCGA_BLCA","TCGA-UY-A78O-01A","8:VPS13B:99835738:+:8:BAALC-AS2:103133369:-:strandcross","VPS13B--BAALC-AS2","ENSG00000132549","ENSG00000236939",3.0,1.0,1.0,1.0,0.839,0.0]
["TCGA_BLCA","TCGA-UY-A78P-01A","4:NEK1:169612020:-:4:LINC02431:171055355:+:strandcross","NEK1--LINC02431","ENSG00000137601","ENSG00000248872",5.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_BLCA","TCGA-UY-A78P-01A","9:FOCAD:20907242:+:9:CDKN2B-AS1:22077679:+:reg","FOCAD--CDKN2B-AS1","ENSG00000188352","ENSG00000240498",5.0,1.0,1.0,1.0,0.882,0.00536193029491]
["TCGA_BLCA","TCGA-UY-A78P-01A","9:HAUS6:19096674:-:9:PLIN2:19108747:-:rev","HAUS6--PLIN2","ENSG00000147874","ENSG00000147872",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BLCA","TCGA-UY-A8OB-01A","19:NECTIN2:44865660:+:19:IGSF23:44635401:+:rev","NECTIN2--IGSF23","ENSG00000130202","ENSG00000216588",28.0,1.0,1.0,1.0,0.903037014132905,"NA"]
["TCGA_BLCA","TCGA-UY-A8OC-01A","8:HGSNAT:43182260:+:8:FUT10:33372804:-:strandcross","HGSNAT--FUT10","ENSG00000165102","ENSG00000172728",48.0,1.0,1.0,1.0,0.79465491095156,0.00413223140496]
["TCGA_BLCA","TCGA-UY-A9PB-01A","10:SH3PXD2A:103855195:-:10:STN1:103910622:-:rev","SH3PXD2A--STN1","ENSG00000107957","ENSG00000107960",20.0,3.0,3.0,3.0,0.773209056867734,"NA"]
["TCGA_BLCA","TCGA-UY-A9PB-01A","16:CREBBP:3879832:-:16:ADCY9:3966966:-:rev","CREBBP--ADCY9","ENSG00000005339","ENSG00000162104",1.0,1.0,1.0,1.0,0.843,"NA"]
["TCGA_BLCA","TCGA-UY-A9PB-01A","1:GNB1:1890820:-:1:FAAP20:2185513:-:rev","GNB1--FAAP20","ENSG00000078369","ENSG00000162585",3.0,1.0,1.0,1.0,0.711,"NA"]
["TCGA_BLCA","TCGA-UY-A9PB-01A","4:SMARCA5:143530526:+:4:AC097658.2:143329279:+:rev","SMARCA5--AC097658.2","ENSG00000153147","ENSG00000250969",7.0,1.0,1.0,1.0,0.782,"NA"]
["TCGA_BLCA","TCGA-UY-A9PD-01A","13:PAN3:28220378:+:13:XPO4:20783919:-:strandcross","PAN3--XPO4","ENSG00000152520","ENSG00000132953",6.0,1.0,1.0,1.0,0.827,0.00531914893617]
["TCGA_BLCA","TCGA-UY-A9PD-01A","17:CDK12:39526316:+:17:AC244100.3:36010020:+:rev","CDK12--AC244100.3","ENSG00000167258","ENSG00000275944",10.0,1.0,1.0,1.0,0.977,0.00531914893617]
["TCGA_BLCA","TCGA-UY-A9PD-01A","17:DHX8:43484185:+:1:FMO5:147190249:-:fusion","DHX8--FMO5","ENSG00000067596","ENSG00000131781",11.0,1.0,1.0,1.0,0.67,0.0159574468085]
["TCGA_BLCA","TCGA-UY-A9PD-01A","17:PSMD11:32454619:+:19:DPRX:53634531:+:fusion","PSMD11--DPRX","ENSG00000108671","ENSG00000204595",8.0,1.0,1.0,1.0,0.836,0.00531914893617]
["TCGA_BLCA","TCGA-UY-A9PD-01A","17:SLFN11:35366947:-:17:CCL14:35983888:-:rev","SLFN11--CCL14","ENSG00000172716","ENSG00000276409",28.0,1.0,1.0,1.0,0.879396678338382,"NA"]
["TCGA_BLCA","TCGA-UY-A9PE-01A","10:PPIF:79351583:+:8:SNX31:100636011:-:fusion","PPIF--SNX31","ENSG00000108179","ENSG00000174226",15.0,1.0,1.0,1.0,0.821,0.00641025641026]
["TCGA_BLCA","TCGA-UY-A9PE-01A","22:SMARCB1:23787262:+:14:SNW1:77735012:-:fusion","SMARCB1--SNW1","ENSG00000099956","ENSG00000100603",5.0,1.0,1.0,1.0,0.466,0.00641025641026]
["TCGA_BLCA","TCGA-UY-A9PE-01A","3:FBXL2:33297962:+:3:KIF9:47257560:-:strandcross","FBXL2--KIF9","ENSG00000153558","ENSG00000088727",3.0,1.0,1.0,1.0,0.936,0.0]
["TCGA_BLCA","TCGA-UY-A9PE-01A","7:TYW1:67098718:+:7:RABGEF1:66712167:+:rev","TYW1--RABGEF1","ENSG00000198874","ENSG00000154710",1.0,1.0,1.0,1.0,0.939,"NA"]
["TCGA_BLCA","TCGA-UY-A9PH-01A","11:CTTN:70409960:+:11:SHANK2:70490387:-:strandcross","CTTN--SHANK2","ENSG00000085733","ENSG00000162105",9.0,1.0,1.0,1.0,0.715,0.00819672131148]
["TCGA_BLCA","TCGA-UY-A9PH-01A","11:PPFIA1:70272436:+:11:SHANK2:70820682:-:strandcross","PPFIA1--SHANK2","ENSG00000131626","ENSG00000162105",17.0,1.0,1.0,1.0,0.842799503654137,0.0]
["TCGA_BLCA","TCGA-XF-A8HB-01A","8:BAG4:38177139:+:8:AC084024.3:38163310:+:rev","BAG4--AC084024.3","ENSG00000156735","ENSG00000253356",23.0,1.0,2.0,1.0,0.770978156907199,"NA"]
["TCGA_BLCA","TCGA-XF-A8HC-01A","17:SYNRG:37585325:-:19:SHC2:425231:-:fusion","SYNRG--SHC2","ENSG00000275066","ENSG00000129946",7.0,1.0,1.0,1.0,0.614,0.00403225806452]
["TCGA_BLCA","TCGA-XF-A8HD-01A","10:ANKRD26:27100085:-:10:MCM10:13209091:+:strandcross","ANKRD26--MCM10","ENSG00000107890","ENSG00000065328",7.0,1.0,1.0,1.0,0.913,0.00200803212851]
["TCGA_BLCA","TCGA-XF-A8HD-01A","20:EPB41L1:36112480:+:20:ATP9A:51729978:-:strandcross","EPB41L1--ATP9A","ENSG00000088367","ENSG00000054793",3.0,1.0,1.0,1.0,0.897,0.00200803212851]
["TCGA_BLCA","TCGA-XF-A8HD-01A","20:EPB41L1:36125527:+:20:ATP9A:51729978:-:strandcross","EPB41L1--ATP9A","ENSG00000088367","ENSG00000054793",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_BLCA","TCGA-XF-A8HD-01A","21:SETD4:36060347:-:21:LINC00159:32086295:-:reg","SETD4--LINC00159","ENSG00000185917","ENSG00000230323",5.0,1.0,1.0,1.0,0.466,0.0180722891566]
["TCGA_BLCA","TCGA-XF-A8HD-01A","3:VGLL4:11702971:-:10:UPF2:11967454:-:fusion","VGLL4--UPF2","ENSG00000144560","ENSG00000151461",100.0,1.0,1.0,1.0,0.976409962303449,0.0]
["TCGA_BLCA","TCGA-XF-A8HD-01A","3:VGLL4:11702971:-:10:UPF2:11979165:-:fusion","VGLL4--UPF2","ENSG00000144560","ENSG00000151461",146.0,1.0,1.0,1.0,0.547049073317013,0.0120481927711]
["TCGA_BLCA","TCGA-XF-A8HF-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",2.0,44.0,40.0,34.0,0.814,0.00280112044818]
["TCGA_BLCA","TCGA-XF-A8HF-01A","3:FNDC3B:172251541:+:3:CLDN11:170708044:+:rev","FNDC3B--CLDN11","ENSG00000075420","ENSG00000013297",7.0,2.0,2.0,2.0,0.39,0.00840336134454]
["TCGA_BLCA","TCGA-XF-A8HG-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,44.0,40.0,34.0,0.914,0.0]
["TCGA_BLCA","TCGA-XF-A8HG-01A","20:AL121753.1:35279566:-:20:BANF2:17735665:+:strandcross","AL121753.1--BANF2","ENSG00000261582","ENSG00000125888",9.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_BLCA","TCGA-XF-A8HG-01A","20:RALGAPA2:20653530:-:20:C20orf194:3264524:-:reg","RALGAPA2--C20orf194","ENSG00000188559","ENSG00000088854",3.0,1.0,1.0,1.0,0.882,0.0]
["TCGA_BLCA","TCGA-XF-A8HG-01A","20:RALGAPA2:20653530:-:20:C20orf194:3270562:-:reg","RALGAPA2--C20orf194","ENSG00000188559","ENSG00000088854",20.0,1.0,1.0,1.0,0.866734351437943,0.0]
["TCGA_BLCA","TCGA-XF-A8HG-01A","8:ADAM9:39026810:+:8:UNC5D:35549292:+:rev","ADAM9--UNC5D","ENSG00000168615","ENSG00000156687",4.0,1.0,1.0,1.0,0.93,0.0]
["TCGA_BLCA","TCGA-XF-A8HH-01A","2:RAB1A:65097971:-:2:NRXN1:50922687:-:reg","RAB1A--NRXN1","ENSG00000138069","ENSG00000179915",14.0,1.0,1.0,1.0,0.544,0.0176470588235]
["TCGA_BLCA","TCGA-XF-A8HH-01A","2:XPO1:61522611:-:2:C2orf74:61157862:+:strandcross","XPO1--C2orf74","ENSG00000082898","ENSG00000237651",8.0,1.0,1.0,1.0,0.179,0.0352941176471]
["TCGA_BLCA","TCGA-XF-A8HH-01A","2:XPO1:61522611:-:2:C2orf74:61162842:+:strandcross","XPO1--C2orf74","ENSG00000082898","ENSG00000274769",4.0,1.0,1.0,1.0,0.336,0.0294117647059]
["TCGA_BLCA","TCGA-XF-A8HH-01A","8:ANKRD46:100559711:-:8:NCALD:101692896:-:rev","ANKRD46--NCALD","ENSG00000186106","ENSG00000104490",19.0,2.0,1.0,1.0,0.729992783995155,0.0117647058824]
["TCGA_BLCA","TCGA-XF-A9SH-01A","12:CNOT2:70278274:+:12:ZDHHC17:76826908:+:reg","CNOT2--ZDHHC17","ENSG00000111596","ENSG00000186908",7.0,1.0,1.0,1.0,0.32,0.0162601626016]
["TCGA_BLCA","TCGA-XF-A9SH-01A","12:FBXO21:117155791:-:12:CHPT1:101714090:+:strandcross","FBXO21--CHPT1","ENSG00000135108","ENSG00000111666",2.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BLCA","TCGA-XF-A9SI-01A","19:ILF3:10654487:+:19:ATG4D:10551897:+:rev","ILF3--ATG4D","ENSG00000129351","ENSG00000130734",13.0,1.0,1.0,1.0,0.433,"NA"]
["TCGA_BLCA","TCGA-XF-A9SJ-01A","14:NUMB:73409937:-:14:PAPLN:73244644:+:strandcross","NUMB--PAPLN","ENSG00000133961","ENSG00000100767",2.0,1.0,1.0,1.0,0.896,0.0]
["TCGA_BLCA","TCGA-XF-A9SK-01A","3:ROBO1:78685746:-:4:ADGRL3:61813809:+:fusion","ROBO1--ADGRL3","ENSG00000169855","ENSG00000150471",2.0,1.0,1.0,1.0,0.951,0.003663003663]
["TCGA_BLCA","TCGA-XF-A9SK-01A","7:AC092647.5:55912723:+:9:NELFB:137272081:+:fusion","AC092647.5--NELFB","ENSG00000249773","ENSG00000188986",8.0,1.0,1.0,1.0,0.868,0.003663003663]
["TCGA_BLCA","TCGA-XF-A9SM-01A","X:HUWE1:53624595:-:12:BICD1:32367670:+:fusion","HUWE1--BICD1","ENSG00000086758","ENSG00000151746",5.0,1.0,1.0,1.0,0.832,0.00285714285714]
["TCGA_BLCA","TCGA-XF-A9SP-01A","17:ABR:1179667:-:12:ACAD10:111753772:+:fusion","ABR--ACAD10","ENSG00000159842","ENSG00000111271",4.0,1.0,1.0,1.0,0.955,0.00446428571429]
["TCGA_BLCA","TCGA-XF-A9SP-01A","17:ATPAF2:18021123:-:17:DRC3:18016064:+:strandcross","ATPAF2--DRC3","ENSG00000171953","ENSG00000171962",3.0,1.0,1.0,1.0,0.75,0.0]
["TCGA_BLCA","TCGA-XF-A9SP-01A","17:SLC43A2:1613195:-:8:AC099805.1:71550292:-:fusion","SLC43A2--AC099805.1","ENSG00000167703","ENSG00000253379",17.0,1.0,1.0,1.0,0.876825354465816,0.0178571428571]
["TCGA_BLCA","TCGA-XF-A9SP-01A","2:AC007422.2:67683952:-:8:DNAJC5B:66099937:+:fusion","AC007422.2--DNAJC5B","ENSG00000235495","ENSG00000147570",5.0,1.0,1.0,1.0,0.4,0.0223214285714]
["TCGA_BLCA","TCGA-XF-A9SP-01A","2:LTBP1:33021206:+:2:BIRC6:32617725:+:rev","LTBP1--BIRC6","ENSG00000049323","ENSG00000115760",1.0,1.0,1.0,1.0,0.832,"NA"]
["TCGA_BLCA","TCGA-XF-A9ST-01A","11:PHF21A:46079134:-:11:AP003086.2:78443648:+:strandcross","PHF21A--AP003086.2","ENSG00000135365","ENSG00000254420",14.0,1.0,1.0,1.0,0.43,0.0102564102564]
["TCGA_BLCA","TCGA-XF-A9ST-01A","11:TEAD1:12674834:+:3:CD47:108060852:-:fusion","TEAD1--CD47","ENSG00000187079","ENSG00000196776",5.0,1.0,1.0,1.0,0.707,0.00512820512821]
["TCGA_BLCA","TCGA-XF-A9ST-01A","11:TEAD1:12675561:+:3:CD47:108060852:-:fusion","TEAD1--CD47","ENSG00000187079","ENSG00000196776",49.0,1.0,1.0,1.0,0.962373577511207,0.0]
["TCGA_BLCA","TCGA-XF-A9ST-01A","3:ARMC8:138289120:+:3:CACNA2D2:50476199:-:strandcross","ARMC8--CACNA2D2","ENSG00000114098","ENSG00000007402",3.0,1.0,1.0,1.0,0.882,0.00512820512821]
["TCGA_BLCA","TCGA-XF-A9ST-01A","8:PVT1:127794734:+:8:C8orf37-AS1:95432626:+:rev","PVT1--C8orf37-AS1","ENSG00000249859","ENSG00000253773",4.0,1.0,1.0,1.0,0.913,0.00512820512821]
["TCGA_BLCA","TCGA-XF-A9ST-01A","10:MRPS16:73251763:-:10:CFAP70:73256416:-:rev","MRPS16--CFAP70","ENSG00000182180","ENSG00000156042",24.0,14.0,13.0,13.0,0.895632597041427,"NA"]
["TCGA_BLCA","TCGA-XF-A9ST-01A","16:AARS:70271781:-:16:AC012184.3:70333960:-:rev","AARS--AC012184.3","ENSG00000090861","ENSG00000261777",3.0,1.0,1.0,1.0,0.474,"NA"]
["TCGA_BLCA","TCGA-XF-A9ST-01A","3:UQCRC1:48600063:-:3:PRKAR2A:48747940:-:rev","UQCRC1--PRKAR2A","ENSG00000010256","ENSG00000114302",19.0,1.0,1.0,1.0,0.746270741103917,"NA"]
["TCGA_BLCA","TCGA-XF-A9ST-01A","5:TNFAIP8:119268907:+:5:DMXL1:119240419:+:rev","TNFAIP8--DMXL1","ENSG00000145779","ENSG00000172869",4.0,1.0,2.0,1.0,0.64,"NA"]
["TCGA_BLCA","TCGA-XF-A9ST-01A","8:FDFT1:11821878:+:8:GATA4:11756935:+:rev","FDFT1--GATA4","ENSG00000079459","ENSG00000136574",12.0,1.0,1.0,1.0,0.653,"NA"]
["TCGA_BLCA","TCGA-XF-A9SU-01A","11:STIM1:3856409:+:8:LINC01605:37421569:-:fusion","STIM1--LINC01605","ENSG00000167323","ENSG00000253161",5.0,1.0,1.0,1.0,0.814,0.00297619047619]
["TCGA_BLCA","TCGA-XF-A9SV-01A","19:SNRNP70:49085636:+:19:CDC42EP5:54471685:-:strandcross","SNRNP70--CDC42EP5","ENSG00000104852","ENSG00000167617",21.0,1.0,1.0,1.0,0.885721884909469,0.0]
["TCGA_BLCA","TCGA-XF-A9SV-01A","19:SNRNP70:49086561:+:19:CDC42EP5:54471685:-:strandcross","SNRNP70--CDC42EP5","ENSG00000104852","ENSG00000167617",46.0,1.0,1.0,1.0,0.297383877081403,0.0416666666667]
["TCGA_BLCA","TCGA-XF-A9SV-01A","2:ADAM17:9535834:-:11:ORAOV1:69654384:-:fusion","ADAM17--ORAOV1","ENSG00000151694","ENSG00000149716",5.0,1.0,1.0,1.0,0.154,0.0416666666667]
["TCGA_BLCA","TCGA-XF-A9SV-01A","2:ADAM17:9535834:-:11:ORAOV1:69654410:-:fusion","ADAM17--ORAOV1","ENSG00000151694","ENSG00000149716",3.0,1.0,1.0,1.0,0.835,0.0]
["TCGA_BLCA","TCGA-XF-A9SV-01A","2:ADAM17:9535834:-:11:ORAOV1:69656652:-:fusion","ADAM17--ORAOV1","ENSG00000151694","ENSG00000149716",10.0,1.0,1.0,1.0,0.867,0.0]
["TCGA_BLCA","TCGA-XF-A9SV-01A","2:ADAM17:9555509:-:11:AP003071.2:69147740:-:fusion","ADAM17--AP003071.2","ENSG00000151694","ENSG00000261070",5.0,1.0,1.0,1.0,0.725,0.0]
["TCGA_BLCA","TCGA-XF-A9SW-01A","17:STARD3:39637231:+:17:PPP1R1B:39629170:+:rev","STARD3--PPP1R1B","ENSG00000131748","ENSG00000131771",2.0,1.0,2.0,1.0,0.999,"NA"]
["TCGA_BLCA","TCGA-XF-A9SY-01A","17:ITGB4:75732239:+:11:LRP4:46902929:-:fusion","ITGB4--LRP4","ENSG00000132470","ENSG00000134569",2.0,1.0,1.0,1.0,0.772,0.00392156862745]
["TCGA_BLCA","TCGA-XF-A9SY-01A","1:DAP3:155709824:+:1:TIPRL:168191369:+:reg","DAP3--TIPRL","ENSG00000132676","ENSG00000143155",12.0,1.0,1.0,1.0,0.865,0.00392156862745]
["TCGA_BLCA","TCGA-XF-A9SY-01A","9:NR6A1:124771020:-:11:DEAF1:654051:-:fusion","NR6A1--DEAF1","ENSG00000148200","ENSG00000177030",2.0,1.0,1.0,1.0,0.834,0.00392156862745]
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["TCGA_BLCA","TCGA-XF-A9SZ-01A","12:EP400:131950036:+:12:TMPRSS12:50843842:+:rev","EP400--TMPRSS12","ENSG00000183495","ENSG00000186452",4.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BLCA","TCGA-XF-A9SZ-01A","2:MGAT4A:98675035:-:3:FGD5-AS1:14924098:-:fusion","MGAT4A--FGD5-AS1","ENSG00000071073","ENSG00000225733",5.0,1.0,1.0,1.0,0.747,0.00406504065041]
["TCGA_BLCA","TCGA-XF-A9SZ-01A","1:LDLRAP1:25543786:+:1:TMEM57:25498264:+:rev","LDLRAP1--TMEM57","ENSG00000157978","ENSG00000204178",10.0,1.0,2.0,1.0,0.816,"NA"]
["TCGA_BLCA","TCGA-XF-A9T0-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,44.0,40.0,34.0,0.358,0.0313588850174]
["TCGA_BLCA","TCGA-XF-A9T0-01A","16:CFDP1:75395090:-:16:WWOX:79211608:+:strandcross","CFDP1--WWOX","ENSG00000153774","ENSG00000186153",72.0,1.0,1.0,1.0,0.862140769579425,0.00696864111498]
["TCGA_BLCA","TCGA-XF-A9T0-01A","4:ZFYVE28:2320170:-:4:SLIT2-IT1:20394529:+:strandcross","ZFYVE28--SLIT2-IT1","ENSG00000159733","ENSG00000248228",3.0,1.0,1.0,1.0,0.835,0.00696864111498]
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["TCGA_BLCA","TCGA-XF-A9T0-01A","7:AHR:17299329:+:7:TSPAN13:16776211:+:rev","AHR--TSPAN13","ENSG00000106546","ENSG00000106537",21.0,1.0,1.0,1.0,0.902394931913005,"NA"]
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["TCGA_BLCA","TCGA-XF-A9T4-01A","9:MELK:36573007:+:9:DCTN3:34618760:-:strandcross","MELK--DCTN3","ENSG00000165304","ENSG00000137100",3.0,1.0,1.0,1.0,0.638,0.0100755667506]
["TCGA_BLCA","TCGA-XF-A9T4-01A","9:RUSC2:35490172:+:9:SHB:38016131:-:strandcross","RUSC2--SHB","ENSG00000198853","ENSG00000255872",6.0,1.0,1.0,1.0,0.427,0.0151133501259]
["TCGA_BLCA","TCGA-XF-A9T4-01A","9:SHB:38016011:-:9:FAM219A:34405964:-:reg","SHB--FAM219A","ENSG00000255872","ENSG00000164970",2.0,1.0,1.0,1.0,0.697,0.00755667506297]
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["TCGA_BLCA","TCGA-XF-A9T8-01A","1:RASAL2:178390206:+:1:ANKRD45:173659433:-:strandcross","RASAL2--ANKRD45","ENSG00000075391","ENSG00000183831",3.0,1.0,1.0,1.0,0.516,0.00314465408805]
["TCGA_BLCA","TCGA-XF-A9T8-01A","1:SDHC:161323670:+:1:FAM78B:166070763:-:strandcross","SDHC--FAM78B","ENSG00000143252","ENSG00000188859",1.0,1.0,1.0,1.0,0.832,0.00314465408805]
["TCGA_BLCA","TCGA-XF-A9T8-01A","1:SRGAP2B:144995008:-:1:GORAB:170539210:+:strandcross","SRGAP2B--GORAB","ENSG00000196369","ENSG00000120370",4.0,1.0,1.0,1.0,0.42,0.0062893081761]
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["TCGA_BLCA","TCGA-XF-AAME-01A","3:AC018816.1:4885723:-:3:BHLHE40-AS1:4900697:-:rev","AC018816.1--BHLHE40-AS1","ENSG00000235978","ENSG00000235831",4.0,1.0,1.0,1.0,0.71,"NA"]
["TCGA_BLCA","TCGA-XF-AAME-01A","9:NUP188:128952846:+:9:LRRC8A:128907157:+:rev","NUP188--LRRC8A","ENSG00000251184","ENSG00000136802",1.0,1.0,1.0,1.0,0.937,"NA"]
["TCGA_BLCA","TCGA-XF-AAMG-01A","12:RAB5B:55974139:+:X:LINC01278:63432491:-:fusion","RAB5B--LINC01278","ENSG00000111540","ENSG00000235437",4.0,1.0,1.0,1.0,0.916,0.00701754385965]
["TCGA_BLCA","TCGA-XF-AAMG-01A","12:RAB5B:55974139:+:X:LINC01278:63517082:-:fusion","RAB5B--LINC01278","ENSG00000111540","ENSG00000235437",5.0,1.0,1.0,1.0,0.961,0.00350877192982]
["TCGA_BLCA","TCGA-XF-AAMG-01A","2:AFF3:99837477:-:6:AL022068.1:19325798:-:fusion","AFF3--AL022068.1","ENSG00000144218","ENSG00000228412",7.0,1.0,1.0,1.0,0.889,0.00701754385965]
["TCGA_BLCA","TCGA-XF-AAMG-01A","3:IRAK2:10200515:+:6:CDKAL1:20846075:+:fusion","IRAK2--CDKAL1","ENSG00000134070","ENSG00000145996",7.0,1.0,1.0,1.0,0.425,0.0210526315789]
["TCGA_BLCA","TCGA-XF-AAMG-01A","3:WDR48:39052073:+:15:HERC2:28152830:-:fusion","WDR48--HERC2","ENSG00000114742","ENSG00000128731",17.0,1.0,1.0,1.0,0.574431644968567,0.0140350877193]
["TCGA_BLCA","TCGA-XF-AAMG-01A","6:VEGFA:43782087:+:6:HIST1H4H:26281587:-:strandcross","VEGFA--HIST1H4H","ENSG00000112715","ENSG00000158406",12.0,1.0,1.0,1.0,0.964,0.0]
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["TCGA_BLCA","TCGA-XF-AAMJ-01A","19:DNM2:10805967:+:19:RFX2:5997213:-:strandcross","DNM2--RFX2","ENSG00000079805","ENSG00000087903",8.0,1.0,1.0,1.0,0.632,0.0211267605634]
["TCGA_BLCA","TCGA-XF-AAML-01A","11:LRP5:68357847:+:16:RBFOX1:6654603:+:fusion","LRP5--RBFOX1","ENSG00000162337","ENSG00000279877",7.0,1.0,1.0,1.0,0.293,0.0229357798165]
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["TCGA_BLCA","TCGA-XF-AAML-01A","16:USP7:8963207:-:9:SMARCA2:2161686:+:fusion","USP7--SMARCA2","ENSG00000187555","ENSG00000080503",8.0,1.0,1.0,1.0,0.41,0.0137614678899]
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["TCGA_BLCA","TCGA-XF-AAMQ-01A","11:SHANK2:70485314:-:11:ANO1:70156947:+:strandcross","SHANK2--ANO1","ENSG00000162105","ENSG00000131620",11.0,1.0,1.0,1.0,0.27,0.0223463687151]
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["TCGA_BLCA","TCGA-XF-AAMR-01A","15:PKM:72206728:-:10:FAM213A:80431986:+:fusion","PKM--FAM213A","ENSG00000067225","ENSG00000122378",2.0,1.0,1.0,1.0,0.877,0.00224215246637]
["TCGA_BLCA","TCGA-XF-AAMT-01A","19:HNRNPUL1:41294686:+:19:CNN1:11541076:+:rev","HNRNPUL1--CNN1","ENSG00000105323","ENSG00000130176",17.0,1.0,1.0,1.0,0.788512430688208,0.00673400673401]
["TCGA_BLCA","TCGA-XF-AAMT-01A","1:SMYD2:214281427:+:6:PTP4A1:63576436:+:fusion","SMYD2--PTP4A1","ENSG00000143499","ENSG00000112245",2.0,1.0,1.0,1.0,0.901,0.00673400673401]
["TCGA_BLCA","TCGA-XF-AAMT-01A","5:MAST4:67133646:+:5:ST8SIA4:100856396:-:strandcross","MAST4--ST8SIA4","ENSG00000069020","ENSG00000113532",4.0,1.0,1.0,1.0,0.935,0.003367003367]
["TCGA_BLCA","TCGA-XF-AAMT-01A","12:RAB35:120108417:-:12:GCN1:120150043:-:rev","RAB35--GCN1","ENSG00000111737","ENSG00000089154",13.0,1.0,1.0,1.0,0.94,"NA"]
["TCGA_BLCA","TCGA-XF-AAMW-01A","11:KDM2A:67121358:+:X:AL133329.1:42054836:-:fusion","KDM2A--AL133329.1","ENSG00000173120","ENSG00000233103",4.0,1.0,1.0,1.0,0.675,0.0122699386503]
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["TCGA_BLCA","TCGA-XF-AAMW-01A","14:ATG14:55385859:-:14:MED6:70584943:-:rev","ATG14--MED6","ENSG00000126775","ENSG00000133997",3.0,1.0,1.0,1.0,0.401,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:C14orf93:23010101:-:14:TIMM9:58411971:-:rev","C14orf93--TIMM9","ENSG00000100802","ENSG00000100575",9.0,1.0,1.0,1.0,0.667,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:CCDC88C:91408659:-:14:SUSD6:69658513:+:strandcross","CCDC88C--SUSD6","ENSG00000015133","ENSG00000100647",4.0,1.0,1.0,1.0,0.375,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:ELMSAN1:73787102:-:14:NUBPL:31599289:+:strandcross","ELMSAN1--NUBPL","ENSG00000156030","ENSG00000151413",40.0,1.0,1.0,1.0,0.874975571938413,0.00613496932515]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:ELMSAN1:73789825:-:14:NUBPL:31599289:+:strandcross","ELMSAN1--NUBPL","ENSG00000156030","ENSG00000151413",3.0,1.0,1.0,1.0,0.811,0.00613496932515]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:HNRNPC:21269298:-:14:PAPOLA:96555847:+:strandcross","HNRNPC--PAPOLA","ENSG00000092199","ENSG00000090060",12.0,1.0,1.0,1.0,0.703,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:MARK3:103468186:+:14:BAG5:103561192:-:strandcross","MARK3--BAG5","ENSG00000075413","ENSG00000166170",3.0,1.0,1.0,1.0,0.811,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:MTHFD1:64388468:+:14:PAPLN:73244644:+:reg","MTHFD1--PAPLN","ENSG00000100714","ENSG00000100767",9.0,1.0,1.0,1.0,0.199,0.0429447852761]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:PCNX1:70908003:+:14:AL365295.1:53369452:+:rev","PCNX1--AL365295.1","ENSG00000100731","ENSG00000237356",10.0,1.0,1.0,1.0,0.526,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:PLEKHH1:67541993:+:14:L2HGDH:50269330:-:strandcross","PLEKHH1--L2HGDH","ENSG00000054690","ENSG00000087299",2.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:PPP4R4:94176127:+:14:MYH6:23386131:-:strandcross","PPP4R4--MYH6","ENSG00000119698","ENSG00000197616",8.0,1.0,1.0,1.0,0.485,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:RDH11:67690212:-:14:LINC01500:58910263:+:strandcross","RDH11--LINC01500","ENSG00000258466","ENSG00000258583",5.0,1.0,1.0,1.0,0.947,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:SIPA1L1:71321181:+:14:PAPOLA:96520055:+:reg","SIPA1L1--PAPOLA","ENSG00000197555","ENSG00000090060",9.0,1.0,1.0,1.0,0.963,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","14:SYNE2:64031357:+:14:ATG2B:96295560:-:strandcross","SYNE2--ATG2B","ENSG00000054654","ENSG00000066739",3.0,1.0,1.0,1.0,0.848,0.00613496932515]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:ALG12:49913385:-:22:AP000345.3:23583478:-:reg","ALG12--AP000345.3","ENSG00000182858","ENSG00000272733",4.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:C1QTNF6:37197603:-:22:SYN3:32980702:-:reg","C1QTNF6--SYN3","ENSG00000133466","ENSG00000185666",11.0,1.0,1.0,1.0,0.534,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:MYH9:36387807:-:22:TOM1:35317877:+:strandcross","MYH9--TOM1","ENSG00000100345","ENSG00000100284",51.0,1.0,1.0,1.0,0.924829428665511,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:PITPNB:27896552:-:22:RFPL3S:32360839:-:rev","PITPNB--RFPL3S","ENSG00000180957","ENSG00000205853",5.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:SYN3:32980645:-:22:IGLV6-57:22195970:+:strandcross","SYN3--IGLV6-57","ENSG00000185666","ENSG00000211640",8.0,1.0,1.0,1.0,0.554,0.0122699386503]
["TCGA_BLCA","TCGA-XF-AAMW-01A","22:TSPO:43151604:+:22:PRR5:44725244:+:reg","TSPO--PRR5","ENSG00000100300","ENSG00000186654",7.0,2.0,1.0,1.0,0.906,0.00613496932515]
["TCGA_BLCA","TCGA-XF-AAMW-01A","9:UBAP2:33932562:-:9:LINGO2:27950706:-:reg","UBAP2--LINGO2","ENSG00000137073","ENSG00000174482",2.0,1.0,1.0,1.0,0.201,0.0429447852761]
["TCGA_BLCA","TCGA-XF-AAMX-01A","15:MAPKBP1:41799914:+:15:VPS39:42163728:-:strandcross","MAPKBP1--VPS39","ENSG00000137802","ENSG00000166887",4.0,1.0,1.0,1.0,0.897,0.00529100529101]
["TCGA_BLCA","TCGA-XF-AAMX-01A","17:CPD:30443971:+:5:PDE4D:59215968:-:fusion","CPD--PDE4D","ENSG00000108582","ENSG00000113448",5.0,1.0,1.0,1.0,0.418,0.037037037037]
["TCGA_BLCA","TCGA-XF-AAMX-01A","1:ATF6:161821161:+:1:LINC01527:152931811:-:strandcross","ATF6--LINC01527","ENSG00000118217","ENSG00000224308",6.0,1.0,1.0,1.0,0.436,0.026455026455]
["TCGA_BLCA","TCGA-XF-AAMX-01A","1:DCAF6:168004793:+:17:BCAS3:60910532:+:fusion","DCAF6--BCAS3","ENSG00000143164","ENSG00000141376",17.0,1.0,1.0,1.0,0.367268025849871,0.037037037037]
["TCGA_BLCA","TCGA-XF-AAMX-01A","1:DCAF6:168023047:+:17:BCAS3:60910532:+:fusion","DCAF6--BCAS3","ENSG00000143164","ENSG00000141376",4.0,1.0,1.0,1.0,0.267,0.037037037037]
["TCGA_BLCA","TCGA-XF-AAMX-01A","2:EPAS1:46297937:+:2:AC092650.1:48164934:-:strandcross","EPAS1--AC092650.1","ENSG00000116016","ENSG00000230773",28.0,1.0,1.0,1.0,0.852985049025809,0.00529100529101]
["TCGA_BLCA","TCGA-XF-AAMX-01A","2:EPAS1:46297937:+:2:AC092650.1:48180458:-:strandcross","EPAS1--AC092650.1","ENSG00000116016","ENSG00000230773",8.0,1.0,1.0,1.0,0.365,0.037037037037]
["TCGA_BLCA","TCGA-XF-AAMX-01A","3:ARL13B:94003908:+:3:EPHA6:97010004:+:reg","ARL13B--EPHA6","ENSG00000169379","ENSG00000080224",9.0,1.0,1.0,1.0,0.928,0.00529100529101]
["TCGA_BLCA","TCGA-XF-AAMX-01A","3:BDH1:197546361:-:7:BMT2:112832675:-:fusion","BDH1--BMT2","ENSG00000161267","ENSG00000164603",5.0,1.0,1.0,1.0,0.673,0.015873015873]
["TCGA_BLCA","TCGA-XF-AAMX-01A","9:CAMSAP1:135907000:-:9:RABL6:136823525:+:strandcross","CAMSAP1--RABL6","ENSG00000130559","ENSG00000272679",22.0,1.0,1.0,1.0,0.745412232021832,0.010582010582]
["TCGA_BLCA","TCGA-XF-AAMX-01A","22:TNRC6B:40044998:+:22:FAM83F:40019168:+:rev","TNRC6B--FAM83F","ENSG00000100354","ENSG00000133477",4.0,1.0,1.0,1.0,0.801,"NA"]
["TCGA_BLCA","TCGA-XF-AAMX-01A","4:FGFR3:1794043:+:4:TACC3:1744518:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",260.0,2.0,1.0,1.0,0.999983555824696,"NA"]
["TCGA_BLCA","TCGA-XF-AAMX-01A","5:UBTD2:172283596:-:5:SH3PXD2B:172325380:-:rev","UBTD2--SH3PXD2B","ENSG00000168246","ENSG00000174705",6.0,1.0,2.0,1.0,0.974,"NA"]
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["TCGA_BLCA","TCGA-XF-AAN0-01A","8:TRIB1:125431262:+:19:SAE1:47203671:+:fusion","TRIB1--SAE1","ENSG00000173334","ENSG00000142230",15.0,1.0,1.0,1.0,0.997,0.0]
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["TCGA_BLCA","TCGA-XF-AAN4-01A","3:ATP11B:182898772:+:10:NET1:5451830:+:fusion","ATP11B--NET1","ENSG00000058063","ENSG00000173848",8.0,1.0,1.0,1.0,0.755,0.010582010582]
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["TCGA_BLCA","TCGA-YC-A89H-01A","20:MAPRE1:32826048:+:20:UQCC1:35347272:-:strandcross","MAPRE1--UQCC1","ENSG00000101367","ENSG00000101019",16.0,1.0,1.0,1.0,0.861866420581456,0.0]
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["TCGA_BLCA","TCGA-ZF-A9R1-01A","X:LINC01456:18104551:-:X:RBBP7:16852122:-:reg","LINC01456--RBBP7","ENSG00000225882","ENSG00000102054",2.0,1.0,1.0,1.0,0.166,0.0265957446809]
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["TCGA_BLCA","TCGA-ZF-A9R3-01A","12:RASSF8:25959148:+:12:CMAS:22062281:+:rev","RASSF8--CMAS","ENSG00000123094","ENSG00000111726",13.0,1.0,1.0,1.0,0.627,0.0104712041885]
["TCGA_BLCA","TCGA-ZF-A9R3-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4","ENSG00000100867","ENSG00000168765",4.0,44.0,40.0,34.0,0.924,0.0104712041885]
["TCGA_BLCA","TCGA-ZF-A9R3-01A","1:KIF1B:10343287:+:17:NF1:31356460:+:fusion","KIF1B--NF1","ENSG00000054523","ENSG00000196712",8.0,1.0,1.0,1.0,0.878,0.0104712041885]
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["TCGA_BLCA","TCGA-ZF-A9R7-01A","7:LINC01004:105012932:-:7:POR:75979451:+:strandcross","LINC01004--POR","ENSG00000228393","ENSG00000127948",8.0,1.0,1.0,1.0,0.546,0.00881057268722]
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["TCGA_BLCA","TCGA-ZF-A9RE-01A","10:PTEN:87933251:+:10:RNLS:88285506:-:strandcross","PTEN--RNLS","ENSG00000171862","ENSG00000184719",48.0,1.0,1.0,1.0,0.368339385187914,0.0406976744186]
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["TCGA_BLCA","TCGA-ZF-A9RL-01A","16:USP31:23102319:-:1:RHD:25284573:+:fusion","USP31--RHD","ENSG00000103404","ENSG00000187010",36.0,1.0,1.0,1.0,0.37494443733049,0.0225563909774]
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["TCGA_BLCA","TCGA-ZF-AA4T-01A","17:CDK12:39463117:+:17:PLXDC1:39109391:-:strandcross","CDK12--PLXDC1","ENSG00000167258","ENSG00000161381",4.0,1.0,1.0,1.0,0.781,0.00555555555556]
["TCGA_BLCA","TCGA-ZF-AA4T-01A","17:CDK12:39501439:+:17:IKZF3:39832151:-:strandcross","CDK12--IKZF3","ENSG00000167258","ENSG00000161405",44.0,1.0,1.0,1.0,0.921401955146776,0.0]
["TCGA_BLCA","TCGA-ZF-AA4T-01A","17:IKZF3:39829387:-:17:SRCIN1:38578791:-:reg","IKZF3--SRCIN1","ENSG00000161405","ENSG00000277363",13.0,1.0,1.0,1.0,0.409,0.00555555555556]
["TCGA_BLCA","TCGA-ZF-AA4T-01A","17:SRCIN1:38605684:-:17:PSMB3:38762411:+:strandcross","SRCIN1--PSMB3","ENSG00000277363","ENSG00000277791",16.0,1.0,1.0,1.0,0.784525332975245,0.00555555555556]
["TCGA_BLCA","TCGA-ZF-AA4T-01A","18:DLGAP1-AS1:3594240:+:10:TAF3:7963920:+:fusion","DLGAP1-AS1--TAF3","ENSG00000177337","ENSG00000165632",2.0,1.0,1.0,1.0,0.194,0.0277777777778]
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["TCGA_BLCA","TCGA-ZF-AA4T-01A","18:LIPG:49569548:+:10:UCMA:13233800:-:fusion","LIPG--UCMA","ENSG00000101670","ENSG00000165623",9.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_BLCA","TCGA-ZF-AA4T-01A","3:SEC13:10320509:-:1:GOLPH3L:150661928:-:fusion","SEC13--GOLPH3L","ENSG00000157020","ENSG00000143457",2.0,1.0,1.0,1.0,0.85,0.0]
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["TCGA_BLCA","TCGA-ZF-AA4U-01A","12:LGR5:71535186:+:12:CNOT2:70353829:+:rev","LGR5--CNOT2","ENSG00000139292","ENSG00000111596",29.0,1.0,2.0,1.0,0.658081293766811,0.0114942528736]
["TCGA_BLCA","TCGA-ZF-AA4U-01A","12:TBC1D15:71918548:+:12:CPSF6:69269512:+:rev","TBC1D15--CPSF6","ENSG00000121749","ENSG00000111605",8.0,1.0,1.0,1.0,0.471,0.0172413793103]
["TCGA_BLCA","TCGA-ZF-AA4U-01A","12:TBC1D15:71918548:+:12:LYZ:69350108:+:rev","TBC1D15--LYZ","ENSG00000121749","ENSG00000090382",4.0,1.0,1.0,1.0,0.39,0.0172413793103]
["TCGA_BLCA","TCGA-ZF-AA4U-01A","12:YEATS4:69370975:+:12:LINC01481:70219597:-:strandcross","YEATS4--LINC01481","ENSG00000127337","ENSG00000257613",2.0,1.0,1.0,1.0,0.906,0.0]
["TCGA_BLCA","TCGA-ZF-AA4V-01A","12:CPSF6:69262562:+:5:EXOC3:464290:+:fusion","CPSF6--EXOC3","ENSG00000111605","ENSG00000180104",2.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_BLCA","TCGA-ZF-AA4V-01A","5:NIPBL:36877178:+:5:AC093297.1:44762086:+:reg","NIPBL--AC093297.1","ENSG00000164190","ENSG00000248779",4.0,1.0,1.0,1.0,0.798,0.00348432055749]
["TCGA_BLCA","TCGA-ZF-AA4V-01A","5:NIPBL:36877178:+:5:MRPS30:44811009:+:reg","NIPBL--MRPS30","ENSG00000164190","ENSG00000112996",4.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BLCA","TCGA-ZF-AA4V-01A","11:CD44:35176740:+:11:PDHX:34966640:+:rev","CD44--PDHX","ENSG00000026508","ENSG00000110435",89.0,1.0,1.0,1.0,0.950244654744822,"NA"]
["TCGA_BLCA","TCGA-ZF-AA4V-01A","3:TNFSF10:172514861:-:3:LINC02068:172561069:-:rev","TNFSF10--LINC02068","ENSG00000121858","ENSG00000223387",5.0,3.0,2.0,2.0,0.631,"NA"]
["TCGA_BLCA","TCGA-ZF-AA4W-01A","3:TNFSF10:172514861:-:3:LINC02068:172561069:-:rev","TNFSF10--LINC02068","ENSG00000121858","ENSG00000223387",404.0,3.0,2.0,2.0,0.779815014592146,"NA"]
["TCGA_BLCA","TCGA-ZF-AA51-01A","19:DNM2:10718403:+:2:ARHGAP25:68775221:+:fusion","DNM2--ARHGAP25","ENSG00000079805","ENSG00000163219",2.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_BLCA","TCGA-ZF-AA51-01A","11:MARK2:63839560:+:11:C11orf84:63817805:+:rev","MARK2--C11orf84","ENSG00000072518","ENSG00000168005",5.0,2.0,2.0,2.0,0.837,"NA"]
["TCGA_BLCA","TCGA-ZF-AA51-01A","12:PTPN6:6952177:+:12:LRRC23:6905585:+:rev","PTPN6--LRRC23","ENSG00000111679","ENSG00000010626",2.0,1.0,1.0,1.0,0.726,"NA"]
["TCGA_BLCA","TCGA-ZF-AA51-01A","2:ITGB6:160169212:-:2:RBMS1:160275714:-:rev","ITGB6--RBMS1","ENSG00000115221","ENSG00000153250",3.0,1.0,1.0,1.0,0.409,"NA"]
["TCGA_BLCA","TCGA-ZF-AA51-01A","2:ITGB6:160169212:-:2:RBMS1:160277383:-:rev","ITGB6--RBMS1","ENSG00000115221","ENSG00000153250",7.0,1.0,1.0,1.0,0.465,"NA"]
["TCGA_BLCA","TCGA-ZF-AA52-01A","13:RB1:48381443:+:13:LINC00539:21303820:-:strandcross","RB1--LINC00539","ENSG00000139687","ENSG00000224429",8.0,1.0,1.0,1.0,0.42,0.00574712643678]
["TCGA_BLCA","TCGA-ZF-AA58-01A","19:FBXO17:38975586:-:2:OSBPL6:178394313:+:fusion","FBXO17--OSBPL6","ENSG00000269190","ENSG00000079156",26.0,1.0,1.0,1.0,0.690919683587813,0.00652173913043]
["TCGA_BLCA","TCGA-ZF-AA58-01A","19:SAMD4B:39357089:+:19:FBXO27:39032253:-:strandcross","SAMD4B--FBXO27","ENSG00000179134","ENSG00000161243",9.0,1.0,1.0,1.0,0.497,0.00869565217391]
["TCGA_BLCA","TCGA-ZF-AA58-01A","19:ZNF569:37444907:-:17:LINC01989:34190668:-:fusion","ZNF569--LINC01989","ENSG00000196437","ENSG00000261156",2.0,1.0,1.0,1.0,0.786,0.00217391304348]
["TCGA_BLCA","TCGA-ZF-AA58-01A","4:PALLD:168711923:+:1:TMEM53:44645464:-:fusion","PALLD--TMEM53","ENSG00000129116","ENSG00000126106",3.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BLCA","TCGA-ZF-AA58-01A","4:PALLD:168711923:+:1:TMEM53:44660295:-:fusion","PALLD--TMEM53","ENSG00000129116","ENSG00000126106",5.0,1.0,1.0,1.0,0.947,0.00217391304348]
["TCGA_BLCA","TCGA-ZF-AA58-01A","4:PALLD:168832171:+:1:TMEM53:44660295:-:fusion","PALLD--TMEM53","ENSG00000129116","ENSG00000126106",15.0,1.0,1.0,1.0,0.826,0.00217391304348]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","19:AC008764.4:16659395:-:19:CACNA1A:13255259:-:reg","AC008764.4--CACNA1A","ENSG00000268790","ENSG00000141837",19.0,1.0,1.0,1.0,0.776558535136686,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","19:PLEKHF1:29665505:+:19:FBL:39834813:-:strandcross","PLEKHF1--FBL","ENSG00000166289","ENSG00000105202",8.0,1.0,1.0,1.0,0.934,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","7:CBX3:26211756:+:7:CDK14:91207165:+:reg","CBX3--CDK14","ENSG00000122565","ENSG00000058091",69.0,1.0,1.0,1.0,0.837577032216983,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","7:CDK13:40002031:+:7:DDX56:44570128:-:strandcross","CDK13--DDX56","ENSG00000065883","ENSG00000136271",29.0,1.0,1.0,1.0,0.91464282652524,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","7:COG5:107548111:-:3:FOXP1:71493555:-:fusion","COG5--FOXP1","ENSG00000164597","ENSG00000114861",4.0,1.0,1.0,1.0,0.891,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","7:RALA:39623825:+:7:CAMK2B:44220901:-:strandcross","RALA--CAMK2B","ENSG00000006451","ENSG00000058404",94.0,1.0,1.0,1.0,0.975878305786884,0.00199203187251]
["TCGA_BLCA","TCGA-ZF-AA5H-01A","7:RALA:39624427:+:7:CAMK2B:44220901:-:strandcross","RALA--CAMK2B","ENSG00000006451","ENSG00000058404",24.0,1.0,1.0,1.0,0.894969063465533,0.00398406374502]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","12:PPM1H:62933923:-:13:DNAJC15:43065686:+:fusion","PPM1H--DNAJC15","ENSG00000111110","ENSG00000120675",2.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","12:PPM1H:62934492:-:13:DNAJC15:43065686:+:fusion","PPM1H--DNAJC15","ENSG00000111110","ENSG00000120675",2.0,1.0,1.0,1.0,0.96,0.00387596899225]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","1:ARID4B:235148404:-:1:MARK1:220579354:+:strandcross","ARID4B--MARK1","ENSG00000188739","ENSG00000116141",4.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","1:BCAS2:114575590:-:2:AC017048.2:176527753:-:fusion","BCAS2--AC017048.2","ENSG00000116752","ENSG00000236231",6.0,1.0,1.0,1.0,0.93,0.00387596899225]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","1:DCAF8:160261285:-:1:FCRLA:161713085:+:strandcross","DCAF8--FCRLA","ENSG00000132716","ENSG00000132185",10.0,1.0,1.0,1.0,0.555,0.0116279069767]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","21:NRIP1:15014344:-:8:DECR1:90042728:+:fusion","NRIP1--DECR1","ENSG00000235609","ENSG00000104325",1.0,1.0,1.0,1.0,0.94,0.00387596899225]
["TCGA_BLCA","TCGA-ZF-AA5P-01A","6:MAN1A1:119301988:-:21:IFNGR2:33478798:+:fusion","MAN1A1--IFNGR2","ENSG00000111885","ENSG00000159128",3.0,1.0,1.0,1.0,0.878,0.0077519379845]
["TCGA_BRCA","TCGA-3C-AAAU-01A","11:GAB2:78364016:-:11:CHKA:68054047:-:reg","GAB2--CHKA","ENSG00000033327","ENSG00000110721",33.0,1.0,1.0,1.0,0.83893985813458,0.00858369098712]
["TCGA_BRCA","TCGA-3C-AAAU-01A","11:GAB2:78417646:-:11:CHKA:68054047:-:reg","GAB2--CHKA","ENSG00000033327","ENSG00000110721",12.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-3C-AAAU-01A","11:PPFIA1:70376600:+:11:MS4A5:60447649:+:rev","PPFIA1--MS4A5","ENSG00000131626","ENSG00000166930",29.0,1.0,1.0,1.0,0.916064416477072,0.00429184549356]
["TCGA_BRCA","TCGA-3C-AAAU-01A","12:CNOT2:70319364:+:12:SRGAP1:63983947:+:rev","CNOT2--SRGAP1","ENSG00000111596","ENSG00000196935",3.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_BRCA","TCGA-3C-AAAU-01A","12:CPM:68869325:-:12:AC090023.1:65560586:+:strandcross","CPM--AC090023.1","ENSG00000135678","ENSG00000255866",5.0,1.0,1.0,1.0,0.396,0.0257510729614]
["TCGA_BRCA","TCGA-3C-AAAU-01A","12:LEMD3:65243469:+:4:RASSF6:73593593:-:fusion","LEMD3--RASSF6","ENSG00000174106","ENSG00000169435",3.0,1.0,1.0,1.0,0.67,0.00858369098712]
["TCGA_BRCA","TCGA-3C-AAAU-01A","12:RAB3IP:69756663:+:12:MSRB3:65488004:+:rev","RAB3IP--MSRB3","ENSG00000127328","ENSG00000174099",20.0,1.0,1.0,1.0,0.856163645167591,0.00429184549356]
["TCGA_BRCA","TCGA-3C-AAAU-01A","4:BTC:74794262:-:1:ZBTB7B:155014655:+:fusion","BTC--ZBTB7B","ENSG00000174808","ENSG00000160685",3.0,1.0,1.0,1.0,0.707,0.00858369098712]
["TCGA_BRCA","TCGA-3C-AAAU-01A","4:G3BP2:75724276:-:20:PTPN1:50561363:+:fusion","G3BP2--PTPN1","ENSG00000138757","ENSG00000196396",5.0,1.0,1.0,1.0,0.828,0.00858369098712]
["TCGA_BRCA","TCGA-3C-AALI-01A","17:CWC25:38825166:-:17:SLC35B1:49706309:-:rev","CWC25--SLC35B1","ENSG00000273559","ENSG00000121073",13.0,1.0,1.0,1.0,0.578,0.0147058823529]
["TCGA_BRCA","TCGA-3C-AALI-01A","17:PRKCA:66641466:+:17:RGS9:65225002:+:rev","PRKCA--RGS9","ENSG00000154229","ENSG00000108370",40.0,1.0,1.0,1.0,0.773364058191895,0.00490196078431]
["TCGA_BRCA","TCGA-3C-AALJ-01A","20:RBM38:57393333:+:8:DNAJC5B:66076660:+:fusion","RBM38--DNAJC5B","ENSG00000132819","ENSG00000147570",9.0,1.0,1.0,1.0,0.541,0.018018018018]
["TCGA_BRCA","TCGA-A1-A0SH-01A","17:CDC27:47189146:-:1:ST7L:112600848:-:fusion","CDC27--ST7L","ENSG00000004897","ENSG00000007341",14.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_BRCA","TCGA-A1-A0SK-01A","10:KIAA1217:24007374:+:1:AC093157.1:101086852:+:fusion","KIAA1217--AC093157.1","ENSG00000120549","ENSG00000233184",3.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_BRCA","TCGA-A1-A0SM-01A","11:UVRAG:75912039:+:11:LRTOMT:72088297:+:rev","UVRAG--LRTOMT","ENSG00000198382","ENSG00000184154",5.0,1.0,1.0,1.0,0.311,0.0325732899023]
["TCGA_BRCA","TCGA-A1-A0SN-01A","17:INTS2:61911940:-:17:AXIN2:65558736:-:rev","INTS2--AXIN2","ENSG00000108506","ENSG00000168646",3.0,1.0,1.0,1.0,0.876,0.00299401197605]
["TCGA_BRCA","TCGA-A1-A0SN-01A","17:TUBD1:59878103:-:17:CDK12:39511529:+:strandcross","TUBD1--CDK12","ENSG00000108423","ENSG00000167258",9.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_BRCA","TCGA-A1-A0SO-01A","17:KPNB1:47658660:+:17:SP2-AS1:47918571:-:strandcross","KPNB1--SP2-AS1","ENSG00000108424","ENSG00000234494",14.0,1.0,1.0,1.0,0.971,0.00515463917526]
["TCGA_BRCA","TCGA-A1-A0SO-01A","8:MTDH:97644887:+:18:AC016205.1:39208789:-:fusion","MTDH--AC016205.1","ENSG00000147649","ENSG00000267374",16.0,1.0,1.0,1.0,0.85383905852438,0.00515463917526]
["TCGA_BRCA","TCGA-A1-A0SQ-01A","11:INTS4:77901421:-:19:PLAUR:43656640:-:fusion","INTS4--PLAUR","ENSG00000149262","ENSG00000011422",10.0,1.0,1.0,1.0,0.462,0.0217917675545]
["TCGA_BRCA","TCGA-A1-A0SQ-01A","20:ARFGAP1:63272920:+:20:SPAG4:35619195:+:rev","ARFGAP1--SPAG4","ENSG00000101199","ENSG00000061656",3.0,1.0,1.0,1.0,0.917,0.0]
["TCGA_BRCA","TCGA-A2-A04P-01A","2:EIF2AK2:37122506:-:2:CEBPZ:37201903:-:rev","EIF2AK2--CEBPZ","ENSG00000055332","ENSG00000115816",54.0,1.0,1.0,1.0,0.964508088861462,"NA"]
["TCGA_BRCA","TCGA-A2-A04T-01A","6:SENP6:75602576:+:6:AL049697.1:87500508:+:reg","SENP6--AL049697.1","ENSG00000112701","ENSG00000213204",2.0,1.0,1.0,1.0,0.511,0.00810810810811]
["TCGA_BRCA","TCGA-A2-A04U-01A","1:RWDD3:95239909:+:1:CCDC18:93246105:+:rev","RWDD3--CCDC18","ENSG00000122481","ENSG00000122483",6.0,1.0,1.0,1.0,0.79,0.0]
["TCGA_BRCA","TCGA-A2-A04U-01A","8:PSD3:19013563:-:X:PAGE4:49830399:+:fusion","PSD3--PAGE4","ENSG00000156011","ENSG00000101951",30.0,1.0,1.0,1.0,0.916238151400064,0.0]
["TCGA_BRCA","TCGA-A2-A04W-01A","17:SLC35B1:49706965:-:17:IGFBP4:40452985:+:strandcross","SLC35B1--IGFBP4","ENSG00000121073","ENSG00000141753",55.0,1.0,1.0,1.0,0.976845655757507,0.0]
["TCGA_BRCA","TCGA-A2-A04W-01A","6:PTPRK:128520259:-:6:HBS1L:134987791:-:rev","PTPRK--HBS1L","ENSG00000152894","ENSG00000112339",11.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-A2-A04Y-01A","8:LRP12:104588819:-:8:VPS13B:99013760:+:strandcross","LRP12--VPS13B","ENSG00000147650","ENSG00000132549",15.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-A2-A0CL-01A","3:GK5:142213526:-:3:MBNL1:152414941:+:strandcross","GK5--MBNL1","ENSG00000175066","ENSG00000152601",8.0,1.0,1.0,1.0,0.585,0.0174563591022]
["TCGA_BRCA","TCGA-A2-A0CU-01A","16:SNTB2:69245815:+:16:AC010547.3:71517605:+:reg","SNTB2--AC010547.3","ENSG00000168807","ENSG00000260520",7.0,1.0,1.0,1.0,0.449,0.012539184953]
["TCGA_BRCA","TCGA-A2-A0CX-01A","17:GRB7:39744207:+:17:AC068234.1:47274419:+:reg","GRB7--AC068234.1","ENSG00000141738","ENSG00000259207",4.0,1.0,1.0,1.0,0.885,0.00377358490566]
["TCGA_BRCA","TCGA-A2-A0CY-01A","4:SEPT11:76949930:+:4:SHROOM3:76770626:+:rev","SEPT11--SHROOM3","ENSG00000138758","ENSG00000138771",2.0,2.0,2.0,2.0,0.518,"NA"]
["TCGA_BRCA","TCGA-A2-A0D0-01A","9:RALGPS1:126965951:+:9:TYRP1:12693912:+:rev","RALGPS1--TYRP1","ENSG00000136828","ENSG00000107165",8.0,1.0,1.0,1.0,0.697,0.0105263157895]
["TCGA_BRCA","TCGA-A2-A0D2-01A","18:ELP2:36154999:+:18:MAPRE2:35101946:+:rev","ELP2--MAPRE2","ENSG00000134759","ENSG00000166974",149.0,1.0,1.0,1.0,0.987210908889048,0.00260416666667]
["TCGA_BRCA","TCGA-A2-A0D4-01A","17:RARA:40318448:+:17:PCTP:55771106:+:reg","RARA--PCTP","ENSG00000131759","ENSG00000141179",18.0,2.0,2.0,2.0,0.86165114042989,0.00276243093923]
["TCGA_BRCA","TCGA-A2-A0ES-01A","11:USP35:78200808:+:11:AP002498.1:76955585:-:strandcross","USP35--AP002498.1","ENSG00000118369","ENSG00000254988",3.0,1.0,1.0,1.0,0.786,0.00534759358289]
["TCGA_BRCA","TCGA-A2-A0EW-01A","9:TJP2:69230232:+:9:TMEM38B:105773865:+:reg","TJP2--TMEM38B","ENSG00000119139","ENSG00000095209",12.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_BRCA","TCGA-A2-A0ST-01A","3:CMTM8:32239119:+:3:NR1D2:23954537:+:rev","CMTM8--NR1D2","ENSG00000170293","ENSG00000174738",4.0,1.0,1.0,1.0,0.984,0.00282485875706]
["TCGA_BRCA","TCGA-A2-A0SX-01A","9:LURAP1L:12776027:+:9:TYRP1:12693912:+:rev","LURAP1L--TYRP1","ENSG00000153714","ENSG00000107165",2.0,1.0,1.0,1.0,0.788,"NA"]
["TCGA_BRCA","TCGA-A2-A0T1-01A","5:WDR70:37479987:+:17:PGAP3:39684749:-:fusion","WDR70--PGAP3","ENSG00000082068","ENSG00000161395",11.0,1.0,1.0,1.0,0.949,0.00581395348837]
["TCGA_BRCA","TCGA-A2-A0T3-01A","8:BAG4:38177139:+:8:EIF4EBP1:38057081:+:rev","BAG4--EIF4EBP1","ENSG00000156735","ENSG00000187840",4.0,1.0,1.0,1.0,0.955,"NA"]
["TCGA_BRCA","TCGA-A2-A0YE-01A","17:SDF2:28661726:-:17:RPTOR:80625691:+:strandcross","SDF2--RPTOR","ENSG00000132581","ENSG00000141564",10.0,1.0,1.0,1.0,0.51,0.0319488817891]
["TCGA_BRCA","TCGA-A2-A0YF-01A","11:UVRAG:75861780:+:11:MYEOV:69366743:+:rev","UVRAG--MYEOV","ENSG00000198382","ENSG00000172927",37.0,1.0,1.0,1.0,0.568401846801946,0.018691588785]
["TCGA_BRCA","TCGA-A2-A0YG-01A","14:TTC6:37623003:+:14:MIPOL1:37422855:+:rev","TTC6--MIPOL1","ENSG00000139865","ENSG00000151338",4.0,4.0,3.0,3.0,0.97,"NA"]
["TCGA_BRCA","TCGA-A2-A0YG-01A","1:DCAF6:167937008:+:1:MPZL1:167765583:+:rev","DCAF6--MPZL1","ENSG00000143164","ENSG00000197965",29.0,2.0,1.0,1.0,0.906346386931786,"NA"]
["TCGA_BRCA","TCGA-A2-A0YM-01A","1:PBX1:164563311:+:1:ILDR2:166958101:-:strandcross","PBX1--ILDR2","ENSG00000185630","ENSG00000143195",11.0,1.0,1.0,1.0,0.353,0.015923566879]
["TCGA_BRCA","TCGA-A2-A1FW-01A","17:CPD:30420983:+:17:AATF:37019005:+:reg","CPD--AATF","ENSG00000108582","ENSG00000275700",298.0,1.0,1.0,1.0,0.999489472601966,0.00227272727273]
["TCGA_BRCA","TCGA-A2-A1FW-01A","1:KDM5B:202773118:-:1:RABGAP1L:174370979:+:strandcross","KDM5B--RABGAP1L","ENSG00000117139","ENSG00000152061",13.0,1.0,1.0,1.0,0.837,0.00454545454545]
["TCGA_BRCA","TCGA-A2-A1FW-01A","1:THEM4:151909360:-:1:S100A10:151986251:-:rev","THEM4--S100A10","ENSG00000159445","ENSG00000197747",7.0,3.0,5.0,3.0,0.456,"NA"]
["TCGA_BRCA","TCGA-A2-A1G1-01A","12:PAWR:79689729:-:12:PPP1R12A:79872938:-:rev","PAWR--PPP1R12A","ENSG00000177425","ENSG00000058272",2.0,5.0,4.0,4.0,0.873,"NA"]
["TCGA_BRCA","TCGA-A2-A25B-01A","17:SMG6:2303633:-:14:WDR20:102194938:+:fusion","SMG6--WDR20","ENSG00000070366","ENSG00000140153",3.0,1.0,1.0,1.0,0.892,0.0]
["TCGA_BRCA","TCGA-A2-A25E-01A","7:TYW1:67055887:+:7:TPST1:66286511:+:rev","TYW1--TPST1","ENSG00000198874","ENSG00000169902",4.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_BRCA","TCGA-A2-A3KC-01A","3:MANF:51386335:+:3:SETD2:47067118:-:strandcross","MANF--SETD2","ENSG00000145050","ENSG00000181555",26.0,1.0,1.0,1.0,0.781993515493315,0.0112781954887]
["TCGA_BRCA","TCGA-A2-A3XW-01A","14:SIX1:60648630:-:11:CYB5R2:7669334:-:fusion","SIX1--CYB5R2","ENSG00000126778","ENSG00000166394",5.0,1.0,1.0,1.0,0.956,0.0]
["TCGA_BRCA","TCGA-A2-A3XY-01A","3:FYCO1:45995722:-:3:RBMS3-AS3:29264757:-:reg","FYCO1--RBMS3-AS3","ENSG00000163820","ENSG00000235904",3.0,1.0,1.0,1.0,0.993,0.00214132762313]
["TCGA_BRCA","TCGA-A2-A4RW-01A","16:CDH1:68738411:+:5:NADK2:36201161:-:fusion","CDH1--NADK2","ENSG00000039068","ENSG00000152620",6.0,1.0,1.0,1.0,0.933,0.00552486187845]
["TCGA_BRCA","TCGA-A7-A0CE-01A","13:UBL3:29849512:-:13:MTIF3:27440449:-:reg","UBL3--MTIF3","ENSG00000122042","ENSG00000122033",2.0,1.0,1.0,1.0,0.498,0.0239726027397]
["TCGA_BRCA","TCGA-A7-A0DA-01A","6:TMEM14B:10755232:+:6:BAG6:31651776:-:strandcross","TMEM14B--BAG6","ENSG00000137210","ENSG00000204463",3.0,1.0,1.0,1.0,0.96,0.00373134328358]
["TCGA_BRCA","TCGA-A7-A13D-01A","1:PBX1:164563311:+:1:DISC1:231958828:+:reg","PBX1--DISC1","ENSG00000185630","ENSG00000162946",10.0,3.0,2.0,2.0,0.659,0.00540540540541]
["TCGA_BRCA","TCGA-A7-A13D-01A","16:PARN:14617590:-:16:RRN3:15084705:-:rev","PARN--RRN3","ENSG00000140694","ENSG00000085721",13.0,3.0,1.0,1.0,0.981,"NA"]
["TCGA_BRCA","TCGA-A7-A13D-01A","20:TAF4:62064451:-:20:LAMA5:62338150:-:rev","TAF4--LAMA5","ENSG00000130699","ENSG00000130702",2.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_BRCA","TCGA-A7-A13D-01A","X:ACOT9:23743125:-:X:APOO:23833510:-:rev","ACOT9--APOO","ENSG00000123130","ENSG00000184831",61.0,3.0,2.0,2.0,0.941972731991886,"NA"]
["TCGA_BRCA","TCGA-A7-A13E-01A","19:AC006538.2:2737048:-:19:PLPP2:288171:-:reg","AC006538.2--PLPP2","ENSG00000267001","ENSG00000141934",25.0,2.0,1.0,1.0,0.678906952392559,0.0118577075099]
["TCGA_BRCA","TCGA-A7-A13G-01B","4:AC097515.1:16421133:+:4:TAPT1-AS1:16238771:+:rev","AC097515.1--TAPT1-AS1","ENSG00000248138","ENSG00000263327",1.0,1.0,1.0,1.0,0.955,"NA"]
["TCGA_BRCA","TCGA-A7-A26G-01A","1:MTF2:93079531:+:1:BRDT:92004414:+:rev","MTF2--BRDT","ENSG00000143033","ENSG00000137948",8.0,1.0,1.0,1.0,0.895,0.0]
["TCGA_BRCA","TCGA-A7-A26G-01A","1:RERE:8655973:-:1:ENO1:8870510:-:rev","RERE--ENO1","ENSG00000142599","ENSG00000074800",6.0,1.0,1.0,1.0,0.607,"NA"]
["TCGA_BRCA","TCGA-A7-A2KD-01A","10:ERCC6:49528417:-:20:PREX1:48708421:-:fusion","ERCC6--PREX1","ENSG00000225830","ENSG00000124126",13.0,1.0,1.0,1.0,0.503,0.0106100795756]
["TCGA_BRCA","TCGA-A7-A2KD-01A","20:CPNE1:35664760:-:10:ERCC6:49524777:-:fusion","CPNE1--ERCC6","ENSG00000214078","ENSG00000225830",246.0,1.0,1.0,1.0,0.999898204980305,0.0]
["TCGA_BRCA","TCGA-A7-A3J0-01A","7:SEM1:96709688:-:5:ADCY2:7772932:+:fusion","SEM1--ADCY2","ENSG00000127922","ENSG00000078295",3.0,2.0,2.0,2.0,0.995,0.0]
["TCGA_BRCA","TCGA-A7-A4SB-01A","11:PPME1:74204445:+:11:TENM4:78672329:-:strandcross","PPME1--TENM4","ENSG00000214517","ENSG00000149256",4.0,1.0,1.0,1.0,0.686,0.00452488687783]
["TCGA_BRCA","TCGA-A7-A4SE-01A","16:TNFRSF12A:3020491:+:16:AC004233.2:2989523:+:rev","TNFRSF12A--AC004233.2","ENSG00000006327","ENSG00000270168",2.0,1.0,1.0,1.0,0.792,"NA"]
["TCGA_BRCA","TCGA-A7-A5ZV-01A","11:ZFP91:58579622:+:11:LPXN:58570713:-:strandcross","ZFP91--LPXN","ENSG00000186660","ENSG00000110031",8.0,1.0,1.0,1.0,0.837,0.0]
["TCGA_BRCA","TCGA-A7-A6VV-01A","11:ARRB1:75351588:-:11:GDPD5:75490320:-:rev","ARRB1--GDPD5","ENSG00000137486","ENSG00000158555",9.0,2.0,2.0,2.0,0.803,"NA"]
["TCGA_BRCA","TCGA-A8-A06N-01A","11:SDHAF2:61438113:+:11:RIN1:66333658:-:strandcross","SDHAF2--RIN1","ENSG00000256591","ENSG00000174791",33.0,1.0,1.0,1.0,0.855847822531136,0.0]
["TCGA_BRCA","TCGA-A8-A06Q-01A","10:ANAPC16:72220379:+:10:MICU1:72477256:-:strandcross","ANAPC16--MICU1","ENSG00000166295","ENSG00000107745",30.0,1.0,1.0,1.0,0.231835328934345,0.0152505446623]
["TCGA_BRCA","TCGA-A8-A06Q-01A","8:ADAM9:39090188:+:12:MGAT4C:86435265:-:fusion","ADAM9--MGAT4C","ENSG00000168615","ENSG00000182050",2.0,1.0,1.0,1.0,0.704,0.00217864923747]
["TCGA_BRCA","TCGA-A8-A06T-01A","8:KAT6A:42048378:-:8:IKBKB:42290156:+:strandcross","KAT6A--IKBKB","ENSG00000083168","ENSG00000104365",2.0,1.0,1.0,1.0,0.899,0.0]
["TCGA_BRCA","TCGA-A8-A06U-01A","3:ATP6V1A:113747113:+:3:OPA1:193626092:+:reg","ATP6V1A--OPA1","ENSG00000114573","ENSG00000198836",5.0,1.0,1.0,1.0,0.844,0.00248138957816]
["TCGA_BRCA","TCGA-A8-A06X-01A","13:UPF3A:114291792:+:13:CDC16:114272184:+:rev","UPF3A--CDC16","ENSG00000169062","ENSG00000130177",3.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_BRCA","TCGA-A8-A076-01A","12:PCBP2:53471807:+:12:EEA1:92864987:-:strandcross","PCBP2--EEA1","ENSG00000197111","ENSG00000102189",40.0,1.0,1.0,1.0,0.847349076110869,0.00574712643678]
["TCGA_BRCA","TCGA-A8-A079-01A","20:EPB41L1:36112480:+:20:GHRH:37256908:-:strandcross","EPB41L1--GHRH","ENSG00000088367","ENSG00000118702",126.0,1.0,1.0,1.0,0.953773354261234,0.0]
["TCGA_BRCA","TCGA-A8-A07C-01A","17:DHX8:43504825:+:1:AL160408.1:234682692:+:fusion","DHX8--AL160408.1","ENSG00000067596","ENSG00000228044",3.0,1.0,1.0,1.0,0.831,0.00155763239875]
["TCGA_BRCA","TCGA-A8-A07C-01A","3:FLNB:58008856:+:3:SLMAP:57912381:+:rev","FLNB--SLMAP","ENSG00000136068","ENSG00000163681",23.0,1.0,2.0,1.0,0.894642618995686,"NA"]
["TCGA_BRCA","TCGA-A8-A07I-01A","17:SPOP:49677933:-:17:XYLT2:50353630:+:strandcross","SPOP--XYLT2","ENSG00000121067","ENSG00000015532",13.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_BRCA","TCGA-A8-A07L-01A","3:SFMBT1:53046460:-:3:RFT1:53106869:-:rev","SFMBT1--RFT1","ENSG00000163935","ENSG00000163933",6.0,1.0,1.0,1.0,0.956,"NA"]
["TCGA_BRCA","TCGA-A8-A07P-01A","11:ZFP91:58584884:+:11:RAB6A:73679720:-:strandcross","ZFP91--RAB6A","ENSG00000186660","ENSG00000175582",20.0,10.0,9.0,9.0,0.718006229192905,0.00772200772201]
["TCGA_BRCA","TCGA-A8-A07U-01A","1:SUCO:172591071:+:1:DNM3:172379018:+:rev","SUCO--DNM3","ENSG00000094975","ENSG00000197959",15.0,1.0,1.0,1.0,0.951,"NA"]
["TCGA_BRCA","TCGA-A8-A07W-01A","13:DLEU1:50083194:+:15:DPH6:35410896:-:fusion","DLEU1--DPH6","ENSG00000176124","ENSG00000134146",3.0,1.0,1.0,1.0,0.221,0.0318725099602]
["TCGA_BRCA","TCGA-A8-A07W-01A","11:CTTN:70398614:+:11:PPFIA1:70354301:+:rev","CTTN--PPFIA1","ENSG00000085733","ENSG00000131626",2.0,1.0,1.0,1.0,0.68,"NA"]
["TCGA_BRCA","TCGA-A8-A085-01A","X:COL4A5:108440206:+:X:RTL9:110450567:+:reg","COL4A5--RTL9","ENSG00000188153","ENSG00000243978",25.0,1.0,1.0,1.0,0.629166280509709,0.00346020761246]
["TCGA_BRCA","TCGA-A8-A08F-01A","12:CNOT2:70243480:+:12:NUP107:68696819:+:rev","CNOT2--NUP107","ENSG00000111596","ENSG00000111581",253.0,1.0,1.0,1.0,0.999524851968713,0.0]
["TCGA_BRCA","TCGA-A8-A08G-01A","9:UBAP2:33996223:-:11:TEAD1:12879708:+:fusion","UBAP2--TEAD1","ENSG00000137073","ENSG00000187079",5.0,1.0,1.0,1.0,0.747,0.00502512562814]
["TCGA_BRCA","TCGA-A8-A08I-01A","19:ZNF675:23687031:-:19:IGSF23:44623707:+:strandcross","ZNF675--IGSF23","ENSG00000197372","ENSG00000216588",7.0,1.0,1.0,1.0,0.522,0.0056338028169]
["TCGA_BRCA","TCGA-A8-A08I-01A","9:TRMT10B:37776405:+:X:AR:67686010:+:fusion","TRMT10B--AR","ENSG00000165275","ENSG00000169083",2.0,1.0,1.0,1.0,0.801,0.0018779342723]
["TCGA_BRCA","TCGA-A8-A08J-01A","17:USP22:21015752:-:17:MYH10:8604982:-:reg","USP22--MYH10","ENSG00000124422","ENSG00000133026",8.0,9.0,9.0,9.0,0.843,0.00623052959502]
["TCGA_BRCA","TCGA-A8-A08L-01A","22:SFI1:31546971:+:18:AC068408.2:27401500:+:fusion","SFI1--AC068408.2","ENSG00000198089","ENSG00000263611",20.0,1.0,1.0,1.0,0.868840188355938,0.0]
["TCGA_BRCA","TCGA-A8-A08P-01A","2:PARD3B:205301701:+:2:AC092598.1:188600609:-:strandcross","PARD3B--AC092598.1","ENSG00000116117","ENSG00000223523",5.0,1.0,1.0,1.0,0.372,0.015306122449]
["TCGA_BRCA","TCGA-A8-A08R-01A","19:LMNB2:2444404:-:19:GNG7:2555188:-:rev","LMNB2--GNG7","ENSG00000176619","ENSG00000176533",19.0,1.0,1.0,1.0,0.616109040061944,"NA"]
["TCGA_BRCA","TCGA-A8-A08X-01A","2:SEPT2:241315982:+:2:KANSL1L:210154611:-:strandcross","SEPT2--KANSL1L","ENSG00000168385","ENSG00000144445",3.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_BRCA","TCGA-A8-A091-01A","11:TSKU:76783404:+:7:SFRP4:37926774:-:fusion","TSKU--SFRP4","ENSG00000182704","ENSG00000106483",27.0,1.0,1.0,1.0,0.62892501229412,0.00779727095517]
["TCGA_BRCA","TCGA-A8-A094-01A","14:ZFYVE26:67816534:-:14:RAD51B:68411424:+:strandcross","ZFYVE26--RAD51B","ENSG00000072121","ENSG00000182185",8.0,1.0,1.0,1.0,0.963,0.00531914893617]
["TCGA_BRCA","TCGA-A8-A097-01A","6:GPLD1:24449789:-:3:PCNP:101590215:+:fusion","GPLD1--PCNP","ENSG00000112293","ENSG00000081154",3.0,1.0,1.0,1.0,0.226,0.0150862068966]
["TCGA_BRCA","TCGA-A8-A09C-01A","11:TMEM135:87038186:+:11:ALDH3B2:67667635:-:strandcross","TMEM135--ALDH3B2","ENSG00000166575","ENSG00000132746",101.0,1.0,1.0,1.0,0.990489810771331,0.0]
["TCGA_BRCA","TCGA-A8-A09D-01A","12:LIN7A:80811465:-:12:NAV3:77571859:+:strandcross","LIN7A--NAV3","ENSG00000111052","ENSG00000067798",10.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_BRCA","TCGA-A8-A09G-01A","17:KANSL1:46170855:-:17:PPP1R1B:39627306:+:strandcross","KANSL1--PPP1R1B","ENSG00000120071","ENSG00000131771",13.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-A8-A09I-01A","16:AXIN1:352369:-:16:FAM234A:249549:+:strandcross","AXIN1--FAM234A","ENSG00000103126","ENSG00000167930",10.0,2.0,1.0,1.0,0.981,0.0]
["TCGA_BRCA","TCGA-A8-A09I-01A","17:MED1:39423327:-:17:GDPD1:59267041:+:strandcross","MED1--GDPD1","ENSG00000125686","ENSG00000153982",1.0,1.0,1.0,1.0,0.899,0.00126422250316]
["TCGA_BRCA","TCGA-A8-A09M-01A","16:PIEZO1:88726284:-:16:APRT:88809840:-:rev","PIEZO1--APRT","ENSG00000103335","ENSG00000198931",54.0,1.0,1.0,1.0,0.57175278218681,"NA"]
["TCGA_BRCA","TCGA-A8-A09Q-01A","12:LARP4:50429090:+:18:PTPRM:8244058:+:fusion","LARP4--PTPRM","ENSG00000161813","ENSG00000173482",3.0,1.0,1.0,1.0,0.284,0.0172839506173]
["TCGA_BRCA","TCGA-A8-A09Q-01A","6:CDC5L:44429910:+:17:PITPNC1:67532802:+:fusion","CDC5L--PITPNC1","ENSG00000096401","ENSG00000154217",28.0,1.0,1.0,1.0,0.90641927458877,0.00246913580247]
["TCGA_BRCA","TCGA-A8-A09X-01A","17:NTN1:9221242:+:17:STX8:9250645:-:strandcross","NTN1--STX8","ENSG00000065320","ENSG00000170310",6.0,6.0,2.0,2.0,0.999,0.0]
["TCGA_BRCA","TCGA-A8-A0A4-01A","17:FLII:18248800:-:17:TOP3A:18307570:-:rev","FLII--TOP3A","ENSG00000177731","ENSG00000177302",2.0,1.0,1.0,1.0,0.414,"NA"]
["TCGA_BRCA","TCGA-A8-A0A7-01A","17:SP2-AS1:47918452:-:12:RNF41:56210568:-:fusion","SP2-AS1--RNF41","ENSG00000234494","ENSG00000181852",5.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-A8-A0AD-01A","6:KDM1B:18171479:+:17:PITPNC1:67578186:+:fusion","KDM1B--PITPNC1","ENSG00000165097","ENSG00000154217",7.0,1.0,1.0,1.0,0.669,0.0238095238095]
["TCGA_BRCA","TCGA-AC-A23H-01A","14:BTBD7:93263785:-:14:UBR7:93222313:+:strandcross","BTBD7--UBR7","ENSG00000011114","ENSG00000012963",8.0,1.0,1.0,1.0,0.527,0.0036231884058]
["TCGA_BRCA","TCGA-AC-A2BK-01A","19:PPP1R12C:55094345:-:19:TPGS1:518889:+:strandcross","PPP1R12C--TPGS1","ENSG00000125503","ENSG00000141933",2.0,1.0,1.0,1.0,0.682,0.0166666666667]
["TCGA_BRCA","TCGA-AC-A2BM-01A","9:ADAMTS13:133449965:+:9:LHX2:124032420:+:rev","ADAMTS13--LHX2","ENSG00000160323","ENSG00000106689",3.0,1.0,1.0,1.0,0.161,0.0267857142857]
["TCGA_BRCA","TCGA-AC-A2FB-01A","17:SSH2:29929938:-:11:ANO1:70111126:+:fusion","SSH2--ANO1","ENSG00000141298","ENSG00000131620",3.0,1.0,1.0,1.0,0.81,0.00249376558603]
["TCGA_BRCA","TCGA-AC-A2FM-01A","19:ZNF274:58210073:+:12:CACNA2D4:1887069:-:fusion","ZNF274--CACNA2D4","ENSG00000171606","ENSG00000151062",26.0,1.0,1.0,1.0,0.774433989173162,0.00887573964497]
["TCGA_BRCA","TCGA-AC-A2QH-01A","4:CASP3:184631037:-:4:CENPU:184729035:-:rev","CASP3--CENPU","ENSG00000164305","ENSG00000151725",2.0,1.0,1.0,1.0,0.84,"NA"]
["TCGA_BRCA","TCGA-AC-A3OD-01A","3:THOC7:63863772:-:3:LRIG1:66462509:-:rev","THOC7--LRIG1","ENSG00000163634","ENSG00000144749",12.0,5.0,2.0,2.0,0.964,0.0]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","17:DDX52:37642110:-:11:RNF121:71960750:+:fusion","DDX52--RNF121","ENSG00000278053","ENSG00000137522",2.0,1.0,1.0,1.0,0.865,0.00211416490486]
["TCGA_BRCA","TCGA-AC-A4ZE-01A","11:MACROD1:64151239:-:11:PITPNM1:67502086:-:rev","MACROD1--PITPNM1","ENSG00000133315","ENSG00000110697",66.0,1.0,1.0,1.0,0.941569724930944,0.0047619047619]
["TCGA_BRCA","TCGA-AC-A5XU-01A","17:GRB2:75393551:-:17:LINC01987:77725002:-:rev","GRB2--LINC01987","ENSG00000177885","ENSG00000267790",41.0,1.0,1.0,1.0,0.960988280445643,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","8:AC083923.2:126557931:+:19:AC020915.1:58312166:+:fusion","AC083923.2--AC020915.1","ENSG00000254286","ENSG00000283515",2.0,1.0,1.0,1.0,0.959,0.0]
["TCGA_BRCA","TCGA-AC-A62V-01A","1:CLK2:155269488:-:1:CD244:160839049:-:rev","CLK2--CD244","ENSG00000176444","ENSG00000122223",18.0,1.0,1.0,1.0,0.41830874730976,0.00595238095238]
["TCGA_BRCA","TCGA-AC-A6IW-01A","1:RAP1GAP:21610120:-:3:NIT2:100354772:+:fusion","RAP1GAP--NIT2","ENSG00000076864","ENSG00000114021",4.0,1.0,1.0,1.0,0.444,0.005859375]
["TCGA_BRCA","TCGA-AC-A6IX-06A","8:LRP12:104588819:-:8:LAPTM4B:97851397:+:strandcross","LRP12--LAPTM4B","ENSG00000147650","ENSG00000104341",29.0,2.0,2.0,2.0,0.715297559512584,0.00715990453461]
["TCGA_BRCA","TCGA-AC-A7VC-01A","8:NDRG1:133297134:-:8:AC104248.1:108918646:-:reg","NDRG1--AC104248.1","ENSG00000104419","ENSG00000253796",3.0,1.0,1.0,1.0,0.839,0.0066889632107]
["TCGA_BRCA","TCGA-AC-A8OR-01A","6:PHACTR2:143537207:+:6:AL357507.1:74347075:+:rev","PHACTR2--AL357507.1","ENSG00000112419","ENSG00000223786",3.0,1.0,1.0,1.0,0.738,0.0152671755725]
["TCGA_BRCA","TCGA-AN-A046-01A","17:RARA:40331396:+:16:AC140504.1:15515305:+:fusion","RARA--AC140504.1","ENSG00000131759","ENSG00000261130",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-AN-A04C-01A","4:PALLD:168668368:+:4:NAA15:139370211:+:rev","PALLD--NAA15","ENSG00000129116","ENSG00000164134",95.0,1.0,1.0,1.0,0.969636045199434,0.0]
["TCGA_BRCA","TCGA-AN-A04D-01A","20:NPEPL1:58707200:+:1:EVI5:92736627:-:fusion","NPEPL1--EVI5","ENSG00000254995","ENSG00000067208",5.0,1.0,1.0,1.0,0.772,0.00970873786408]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","1:MYSM1:58699985:-:1:PATJ:61787754:+:strandcross","MYSM1--PATJ","ENSG00000162601","ENSG00000132849",3.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_BRCA","TCGA-AN-A0AL-01A","1:GNAI3:109574037:+:1:KIAA1324:109164499:+:rev","GNAI3--KIAA1324","ENSG00000065135","ENSG00000116299",6.0,1.0,1.0,1.0,0.633,"NA"]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:MDM2:68828931:+:12:XPOT:64439244:+:rev","MDM2--XPOT","ENSG00000135679","ENSG00000184575",39.0,1.0,1.0,1.0,0.213555717632786,0.015625]
["TCGA_BRCA","TCGA-AN-A0AM-01A","1:SCP2:52961629:+:1:FAF1:50705891:-:strandcross","SCP2--FAF1","ENSG00000116171","ENSG00000185104",2.0,1.0,1.0,1.0,0.897,0.00401606425703]
["TCGA_BRCA","TCGA-AN-A0AM-01A","5:TRIO:14488260:+:5:MARCH11:16091081:-:strandcross","TRIO--MARCH11","ENSG00000038382","ENSG00000183654",118.0,1.0,1.0,1.0,0.984343234762578,0.0]
["TCGA_BRCA","TCGA-AN-A0AR-01A","18:ESCO1:21600623:-:9:KANK1:710804:+:fusion","ESCO1--KANK1","ENSG00000141446","ENSG00000107104",4.0,1.0,1.0,1.0,0.711,0.00437636761488]
["TCGA_BRCA","TCGA-AN-A0AS-01A","14:DCAF5:69152765:-:12:RAB5B:55986869:+:fusion","DCAF5--RAB5B","ENSG00000139990","ENSG00000111540",9.0,1.0,1.0,1.0,0.567,0.0111940298507]
["TCGA_BRCA","TCGA-AN-A0FD-01A","19:TPM4:16076697:+:17:INTS2:61875038:-:fusion","TPM4--INTS2","ENSG00000167460","ENSG00000108506",9.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-AN-A0FJ-01A","16:SMG1:18879495:-:16:AC099518.4:19064039:-:rev","SMG1--AC099518.4","ENSG00000157106","ENSG00000261465",2.0,1.0,1.0,1.0,0.546,"NA"]
["TCGA_BRCA","TCGA-AN-A0FL-01A","2:PKP4:158457218:+:2:UPP2:157995180:+:rev","PKP4--UPP2","ENSG00000144283","ENSG00000007001",4.0,1.0,1.0,1.0,0.49,"NA"]
["TCGA_BRCA","TCGA-AN-A0FV-01A","20:VAPB:58418363:+:17:IKZF3:39832151:-:fusion","VAPB--IKZF3","ENSG00000124164","ENSG00000161405",4.0,1.0,1.0,1.0,0.307,0.0238907849829]
["TCGA_BRCA","TCGA-AN-A0FV-01A","19:EHD2:47718606:+:19:C5AR1:47307725:+:rev","EHD2--C5AR1","ENSG00000024422","ENSG00000197405",2.0,1.0,1.0,1.0,0.538,"NA"]
["TCGA_BRCA","TCGA-AN-A0FX-01A","19:CPAMD8:16896176:-:13:SAP18:21146805:+:fusion","CPAMD8--SAP18","ENSG00000160111","ENSG00000150459",8.0,1.0,1.0,1.0,0.387,0.025078369906]
["TCGA_BRCA","TCGA-AN-A0FY-01A","20:SYCP2:59865388:-:20:BCAS1:53957497:-:reg","SYCP2--BCAS1","ENSG00000196074","ENSG00000064787",8.0,1.0,1.0,1.0,0.377,0.0206489675516]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","1:DHDDS:26433008:+:7:AC007091.1:19578529:+:fusion","DHDDS--AC007091.1","ENSG00000117682","ENSG00000223838",1.0,1.0,1.0,1.0,0.79,0.00735294117647]
["TCGA_BRCA","TCGA-AN-A0G0-01A","11:ACER3:76861079:+:11:NARS2:78443758:-:strandcross","ACER3--NARS2","ENSG00000078124","ENSG00000137513",6.0,1.0,1.0,1.0,0.707,0.00493827160494]
["TCGA_BRCA","TCGA-AN-A0XN-01A","7:LINC-PINT:131107720:-:7:RSBN1L:77749424:+:strandcross","LINC-PINT--RSBN1L","ENSG00000231721","ENSG00000187257",6.0,1.0,1.0,1.0,0.818,0.00934579439252]
["TCGA_BRCA","TCGA-AN-A0XU-01A","5:ADAMTS12:33661916:-:5:ZFR:32355939:-:reg","ADAMTS12--ZFR","ENSG00000151388","ENSG00000056097",5.0,1.0,1.0,1.0,0.938,0.00234741784038]
["TCGA_BRCA","TCGA-AN-A0XV-01A","8:SLC25A32:103414784:-:8:LAPTM4B:97851397:+:strandcross","SLC25A32--LAPTM4B","ENSG00000164933","ENSG00000104341",85.0,1.0,1.0,1.0,0.749596803866051,0.00324675324675]
["TCGA_BRCA","TCGA-AN-A0XW-01A","9:SNAPC3:15423986:+:11:AP003086.2:78443648:+:fusion","SNAPC3--AP003086.2","ENSG00000164975","ENSG00000254420",9.0,1.0,1.0,1.0,0.678,0.0135869565217]
["TCGA_BRCA","TCGA-AO-A03M-01B","20:ZNF217:53575727:-:20:ZNFX1:49239300:-:reg","ZNF217--ZNFX1","ENSG00000171940","ENSG00000124201",3.0,1.0,1.0,1.0,0.738,0.00456621004566]
["TCGA_BRCA","TCGA-AO-A03P-01A","10:GRID1:86138819:-:15:PGPEP1L:98971158:-:fusion","GRID1--PGPEP1L","ENSG00000182771","ENSG00000183571",6.0,1.0,1.0,1.0,0.872,0.00319488817891]
["TCGA_BRCA","TCGA-AO-A03P-01A","15:IGF1R:98930305:+:15:AC107241.1:60544805:+:rev","IGF1R--AC107241.1","ENSG00000140443","ENSG00000259274",49.0,1.0,1.0,1.0,0.936984229583097,0.0]
["TCGA_BRCA","TCGA-AO-A03P-01A","20:OSBPL2:62263691:+:3:PLD1:171620520:-:fusion","OSBPL2--PLD1","ENSG00000130703","ENSG00000075651",4.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_BRCA","TCGA-AO-A03V-01A","19:BRSK1:55284578:+:19:HSPBP1:55266286:-:strandcross","BRSK1--HSPBP1","ENSG00000160469","ENSG00000133265",16.0,1.0,1.0,1.0,0.771460068957821,0.0]
["TCGA_BRCA","TCGA-AO-A0J2-01A","6:ZNF292:87155759:+:6:FIG4:109792582:+:reg","ZNF292--FIG4","ENSG00000188994","ENSG00000112367",2.0,1.0,1.0,1.0,0.94,0.0]
["TCGA_BRCA","TCGA-AO-A0J4-01A","4:PACRGL:20713539:+:18:TXNL1:56618126:-:fusion","PACRGL--TXNL1","ENSG00000163138","ENSG00000091164",1.0,1.0,1.0,1.0,0.715,0.00520833333333]
["TCGA_BRCA","TCGA-AO-A0J6-01A","10:CCDC6:59906122:-:10:UBE2D1:58361338:+:strandcross","CCDC6--UBE2D1","ENSG00000108091","ENSG00000072401",2.0,1.0,1.0,1.0,0.605,0.00435729847495]
["TCGA_BRCA","TCGA-AO-A0JD-01A","5:NDUFAF2:60945382:+:5:ANKRD31:75084374:-:strandcross","NDUFAF2--ANKRD31","ENSG00000164182","ENSG00000145700",4.0,1.0,1.0,1.0,0.357,0.0190476190476]
["TCGA_BRCA","TCGA-AO-A0JG-01A","17:SKAP1:48345905:-:17:TMEM100:55722729:-:rev","SKAP1--TMEM100","ENSG00000141293","ENSG00000166292",6.0,1.0,1.0,1.0,0.467,0.0120967741935]
["TCGA_BRCA","TCGA-AO-A0JM-01A","17:LLGL2:75569325:+:17:CA10:51747818:-:strandcross","LLGL2--CA10","ENSG00000073350","ENSG00000154975",3.0,1.0,1.0,1.0,0.602,0.0046511627907]
["TCGA_BRCA","TCGA-AO-A124-01A","12:KDM5A:295573:-:12:NINJ2:566178:-:rev","KDM5A--NINJ2","ENSG00000073614","ENSG00000171840",19.0,2.0,3.0,2.0,0.603594543404572,"NA"]
["TCGA_BRCA","TCGA-AO-A128-01A","3:USP4:49339924:-:3:RHOA:49360382:-:rev","USP4--RHOA","ENSG00000114316","ENSG00000067560",2.0,1.0,1.0,1.0,0.938,"NA"]
["TCGA_BRCA","TCGA-AO-A129-01A","4:FAM114A1:38935790:+:7:IQCE:2589907:+:fusion","FAM114A1--IQCE","ENSG00000197712","ENSG00000106012",8.0,1.0,1.0,1.0,0.341,0.0181818181818]
["TCGA_BRCA","TCGA-AO-A12D-01A","7:ST7:116953691:+:7:ST7-AS2:117073926:-:strandcross","ST7--ST7-AS2","ENSG00000004866","ENSG00000226367",8.0,2.0,2.0,2.0,0.932,0.00473933649289]
["TCGA_BRCA","TCGA-AO-A12G-01A","7:NUPL2:23187146:+:16:PARN:14482827:-:fusion","NUPL2--PARN","ENSG00000136243","ENSG00000140694",2.0,1.0,1.0,1.0,0.839,0.0]
["TCGA_BRCA","TCGA-AO-A1KR-01A","15:MAN2C1:75355567:-:15:SIN3A:75381705:-:rev","MAN2C1--SIN3A","ENSG00000140400","ENSG00000169375",7.0,1.0,1.0,1.0,0.794,"NA"]
["TCGA_BRCA","TCGA-AQ-A04H-01B","17:PTRH2:59707371:-:3:PEX5L:179859157:-:fusion","PTRH2--PEX5L","ENSG00000141378","ENSG00000114757",5.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_BRCA","TCGA-AQ-A04L-01B","10:FAM213A:80420645:+:4:YTHDC1:68314323:-:fusion","FAM213A--YTHDC1","ENSG00000122378","ENSG00000083896",16.0,1.0,1.0,1.0,0.826132488457997,0.00408163265306]
["TCGA_BRCA","TCGA-AQ-A04L-01B","19:STK11:1207203:+:19:TYK2:10365898:-:strandcross","STK11--TYK2","ENSG00000118046","ENSG00000105397",9.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-AQ-A0Y5-01A","17:PHOSPHO1:49230468:-:17:KRT23:40930096:-:reg","PHOSPHO1--KRT23","ENSG00000173868","ENSG00000108244",9.0,1.0,1.0,1.0,0.735,0.00813008130081]
["TCGA_BRCA","TCGA-AQ-A54N-01A","16:SF3B3:70535420:+:16:COG4:70510021:-:strandcross","SF3B3--COG4","ENSG00000189091","ENSG00000103051",27.0,1.0,1.0,1.0,0.911458965933853,0.0]
["TCGA_BRCA","TCGA-AR-A0TP-01A","1:JAK1:64846649:-:22:ZC3H7B:41343415:+:fusion","JAK1--ZC3H7B","ENSG00000162434","ENSG00000100403",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-AR-A0TQ-01A","17:TADA2A:37458587:+:17:MED24:40036154:-:strandcross","TADA2A--MED24","ENSG00000276234","ENSG00000008838",35.0,2.0,1.0,1.0,0.92335585397295,0.00255102040816]
["TCGA_BRCA","TCGA-AR-A0TQ-01A","20:PTPN1:50510590:+:20:MIR646HG:60180835:+:reg","PTPN1--MIR646HG","ENSG00000196396","ENSG00000228340",9.0,1.0,1.0,1.0,0.345,0.0255102040816]
["TCGA_BRCA","TCGA-AR-A0TT-01A","10:INPP5A:132650505:+:11:DLG2:84534731:-:fusion","INPP5A--DLG2","ENSG00000068383","ENSG00000150672",3.0,1.0,1.0,1.0,0.826,0.0147058823529]
["TCGA_BRCA","TCGA-AR-A0TU-01A","15:ANP32A:68820698:-:8:LRRC6:132638107:-:fusion","ANP32A--LRRC6","ENSG00000140350","ENSG00000129295",6.0,1.0,1.0,1.0,0.383,0.0194444444444]
["TCGA_BRCA","TCGA-AR-A0TV-01A","18:CTIF:48539312:+:18:LOXHD1:46509815:-:strandcross","CTIF--LOXHD1","ENSG00000134030","ENSG00000167210",3.0,1.0,1.0,1.0,0.968,0.00732600732601]
["TCGA_BRCA","TCGA-AR-A0TX-01A","12:DYRK2:67649945:+:20:AL354836.1:62305826:-:fusion","DYRK2--AL354836.1","ENSG00000127334","ENSG00000226332",3.0,1.0,1.0,1.0,0.845,0.00306748466258]
["TCGA_BRCA","TCGA-AR-A0TY-01A","6:RREB1:7189322:+:17:LINC00511:72401421:-:fusion","RREB1--LINC00511","ENSG00000124782","ENSG00000227036",20.0,1.0,1.0,1.0,0.620406045258731,0.00882352941176]
["TCGA_BRCA","TCGA-AR-A0U2-01A","16:BCKDK:31108479:+:16:HSD3B7:30986840:+:rev","BCKDK--HSD3B7","ENSG00000103507","ENSG00000099377",2.0,1.0,1.0,1.0,0.922,"NA"]
["TCGA_BRCA","TCGA-AR-A0U4-01A","1:NASP:45615471:+:1:ZCCHC17:31310044:+:rev","NASP--ZCCHC17","ENSG00000132780","ENSG00000121766",4.0,1.0,1.0,1.0,0.289,0.0166666666667]
["TCGA_BRCA","TCGA-AR-A1AH-01A","12:DNM1L:32679465:+:12:TM7SF3:27003390:-:strandcross","DNM1L--TM7SF3","ENSG00000087470","ENSG00000064115",2.0,1.0,1.0,1.0,0.851,0.00341296928328]
["TCGA_BRCA","TCGA-AR-A1AJ-01A","18:DSG3:31469349:+:18:DSG1-AS1:31354453:-:strandcross","DSG3--DSG1-AS1","ENSG00000134757","ENSG00000266729",3.0,1.0,1.0,1.0,0.866,0.0019801980198]
["TCGA_BRCA","TCGA-AR-A1AO-01A","17:ZNF594:5191432:-:17:SCIMP:5210955:-:rev","ZNF594--SCIMP","ENSG00000180626","ENSG00000161929",2.0,1.0,1.0,1.0,0.773,"NA"]
["TCGA_BRCA","TCGA-AR-A1AU-01A","8:CHD7:60743097:+:8:ASPH:61684188:-:strandcross","CHD7--ASPH","ENSG00000171316","ENSG00000198363",11.0,1.0,1.0,1.0,0.378,0.0128865979381]
["TCGA_BRCA","TCGA-AR-A1AY-01A","6:AL354740.1:34248670:+:6:LTB:31581630:-:strandcross","AL354740.1--LTB","ENSG00000225339","ENSG00000227507",2.0,1.0,1.0,1.0,0.927,0.00354609929078]
["TCGA_BRCA","TCGA-AR-A24K-01A","14:RAD51B:67835196:+:14:RBM25:73111528:+:reg","RAD51B--RBM25","ENSG00000182185","ENSG00000119707",3.0,1.0,1.0,1.0,0.231,0.030612244898]
["TCGA_BRCA","TCGA-AR-A24L-01A","5:FGF10:44388358:-:5:AC093297.2:44747696:-:rev","FGF10--AC093297.2","ENSG00000070193","ENSG00000251141",21.0,1.0,1.0,1.0,0.84864168173613,"NA"]
["TCGA_BRCA","TCGA-AR-A24S-01A","19:ZNF431:21151198:+:19:WIZ:15430089:-:strandcross","ZNF431--WIZ","ENSG00000196705","ENSG00000011451",4.0,1.0,1.0,1.0,0.309,0.0258064516129]
["TCGA_BRCA","TCGA-AR-A24Z-01A","11:CBL:119278713:+:11:CLNS1A:77530014:-:strandcross","CBL--CLNS1A","ENSG00000110395","ENSG00000074201",2.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_BRCA","TCGA-AR-A24Z-01A","22:PACSIN2:42912021:-:19:ZNF823:11725327:-:fusion","PACSIN2--ZNF823","ENSG00000100266","ENSG00000197933",13.0,1.0,1.0,1.0,0.173,0.0388888888889]
["TCGA_BRCA","TCGA-AR-A250-01A","8:FUT10:33453216:-:11:GAB2:78250400:-:fusion","FUT10--GAB2","ENSG00000172728","ENSG00000033327",29.0,1.0,1.0,1.0,0.43853026800172,0.0169971671388]
["TCGA_BRCA","TCGA-AR-A251-01A","15:CGNL1:57461892:+:15:TCF12:57286157:+:rev","CGNL1--TCF12","ENSG00000128849","ENSG00000140262",12.0,1.0,1.0,1.0,0.966,"NA"]
["TCGA_BRCA","TCGA-AR-A254-01A","17:SP2-AS1:47918452:-:17:DNAJC7:42000570:-:reg","SP2-AS1--DNAJC7","ENSG00000234494","ENSG00000168259",5.0,1.0,1.0,1.0,0.938,0.0]
["TCGA_BRCA","TCGA-AR-A256-01A","5:PGGT1B:115253133:-:5:KIAA0825:94154124:-:reg","PGGT1B--KIAA0825","ENSG00000164219","ENSG00000185261",2.0,1.0,1.0,1.0,0.755,0.0]
["TCGA_BRCA","TCGA-AR-A256-01A","2:TIA1:70248405:-:2:TGFA:70465736:-:rev","TIA1--TGFA","ENSG00000115998","ENSG00000163235",12.0,1.0,1.0,1.0,0.563,"NA"]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:ZNF37A:38096632:+:9:PIP5K1B:68707603:+:fusion","ZNF37A--PIP5K1B","ENSG00000075407","ENSG00000107242",14.0,1.0,1.0,1.0,0.568,0.0]
["TCGA_BRCA","TCGA-AR-A2LR-01A","16:C16orf95:87302903:-:X:GABRA3:152345702:-:fusion","C16orf95--GABRA3","ENSG00000260456","ENSG00000011677",1.0,1.0,1.0,1.0,0.75,0.00454545454545]
["TCGA_BRCA","TCGA-AR-A2LR-01A","19:BCL3:44749046:+:19:IGSF23:44635401:+:rev","BCL3--IGSF23","ENSG00000069399","ENSG00000216588",2.0,1.0,1.0,1.0,0.547,"NA"]
["TCGA_BRCA","TCGA-B6-A0I1-01A","1:MAN1A2:117420649:+:1:TTF2:117097351:+:rev","MAN1A2--TTF2","ENSG00000198162","ENSG00000116830",3.0,1.0,1.0,1.0,0.762,"NA"]
["TCGA_BRCA","TCGA-B6-A0I6-01A","8:PPP1R16A:144490212:+:8:ADCK5:144390671:+:rev","PPP1R16A--ADCK5","ENSG00000160972","ENSG00000173137",4.0,1.0,1.0,1.0,0.727,"NA"]
["TCGA_BRCA","TCGA-B6-A0I9-01A","17:NF1:31349251:+:7:ABCB5:20632059:+:fusion","NF1--ABCB5","ENSG00000196712","ENSG00000004846",4.0,1.0,1.0,1.0,0.403,0.00911161731207]
["TCGA_BRCA","TCGA-B6-A0IA-01A","6:NUP153:17688396:-:6:GCNT2:10509087:+:strandcross","NUP153--GCNT2","ENSG00000124789","ENSG00000111846",13.0,1.0,1.0,1.0,0.584,0.00872093023256]
["TCGA_BRCA","TCGA-B6-A0IG-01A","11:KDM2A:67250798:+:11:RHOD:67065896:+:rev","KDM2A--RHOD","ENSG00000173120","ENSG00000173156",29.0,1.0,1.0,1.0,0.611719606965791,"NA"]
["TCGA_BRCA","TCGA-B6-A0IK-01A","17:USP32:60345481:-:17:BCAS3:60808004:+:strandcross","USP32--BCAS3","ENSG00000170832","ENSG00000141376",9.0,1.0,1.0,1.0,0.441,0.0131578947368]
["TCGA_BRCA","TCGA-B6-A0IN-01A","17:RARA:40331396:+:17:SKAP1:48137337:-:strandcross","RARA--SKAP1","ENSG00000131759","ENSG00000141293",129.0,1.0,1.0,1.0,0.975702838068635,0.0]
["TCGA_BRCA","TCGA-B6-A0IO-01A","5:LINC02224:44500541:-:5:AC093297.2:44777328:-:rev","LINC02224--AC093297.2","ENSG00000249203","ENSG00000251141",2.0,1.0,1.0,1.0,0.871,"NA"]
["TCGA_BRCA","TCGA-B6-A0IQ-01A","1:PBX1:164812149:+:10:CTNNA3:66775524:-:fusion","PBX1--CTNNA3","ENSG00000185630","ENSG00000183230",35.0,1.0,1.0,1.0,0.728203171290191,0.00337837837838]
["TCGA_BRCA","TCGA-B6-A0RL-01A","11:PPME1:74204445:+:8:AC087362.1:38337323:+:fusion","PPME1--AC087362.1","ENSG00000214517","ENSG00000254898",3.0,1.0,1.0,1.0,0.704,0.00684931506849]
["TCGA_BRCA","TCGA-B6-A0RS-01A","11:SHANK2:71224697:-:8:ANXA13:123702736:-:fusion","SHANK2--ANXA13","ENSG00000162105","ENSG00000104537",9.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BRCA","TCGA-B6-A0RT-01A","19:HPN:35042522:+:14:PPP2R5C:101836169:+:fusion","HPN--PPP2R5C","ENSG00000105707","ENSG00000078304",5.0,1.0,1.0,1.0,0.186,0.0498812351544]
["TCGA_BRCA","TCGA-B6-A0RU-01A","11:TESMIN:68747208:-:11:CPT1A:68761687:-:rev","TESMIN--CPT1A","ENSG00000132749","ENSG00000110090",32.0,1.0,1.0,1.0,0.851992690291137,"NA"]
["TCGA_BRCA","TCGA-B6-A0WX-01A","11:IMMP1L:31509519:-:11:ELP4:31520056:+:strandcross","IMMP1L--ELP4","ENSG00000148950","ENSG00000109911",3.0,4.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-B6-A0X1-01A","9:KIAA2026:5988345:-:2:LINC01820:46392483:-:fusion","KIAA2026--LINC01820","ENSG00000183354","ENSG00000228100",9.0,1.0,1.0,1.0,0.378,0.0138408304498]
["TCGA_BRCA","TCGA-B6-A1KC-01B","8:FNTA:43056546:+:6:DST:56900621:-:fusion","FNTA--DST","ENSG00000168522","ENSG00000151914",2.0,1.0,1.0,1.0,0.898,0.00276243093923]
["TCGA_BRCA","TCGA-B6-A3ZX-01A","1:ARHGEF10L:17656708:+:1:PADI4:17330969:+:rev","ARHGEF10L--PADI4","ENSG00000074964","ENSG00000159339",5.0,1.0,1.0,1.0,0.774,"NA"]
["TCGA_BRCA","TCGA-B6-A408-01A","18:RBFA:80034653:+:18:ATP9B:79096476:+:rev","RBFA--ATP9B","ENSG00000267127","ENSG00000166377",1.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_BRCA","TCGA-BH-A0AV-01A","8:PUF60:143829280:-:8:ZNF251:144723382:-:rev","PUF60--ZNF251","ENSG00000179950","ENSG00000198169",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_BRCA","TCGA-BH-A0B1-01A","8:RB1CC1:52714075:-:8:CHRNB3:42708717:+:strandcross","RB1CC1--CHRNB3","ENSG00000023287","ENSG00000147432",3.0,1.0,1.0,1.0,0.821,0.014367816092]
["TCGA_BRCA","TCGA-BH-A0B1-01A","14:POLE2:49679725:-:14:NEMF:49795944:-:rev","POLE2--NEMF","ENSG00000100479","ENSG00000165525",3.0,1.0,1.0,1.0,0.99,"NA"]
["TCGA_BRCA","TCGA-BH-A0B5-01A","X:G6PD:154546036:-:X:F8:154863227:-:rev","G6PD--F8","ENSG00000160211","ENSG00000185010",14.0,1.0,1.0,1.0,0.838,"NA"]
["TCGA_BRCA","TCGA-BH-A0B7-01A","17:PIP4K2B:38799266:-:17:TMEM132E:34626127:+:strandcross","PIP4K2B--TMEM132E","ENSG00000276293","ENSG00000181291",9.0,1.0,1.0,1.0,0.587,0.00796812749004]
["TCGA_BRCA","TCGA-BH-A0B9-01A","16:AARS:70269618:-:16:ST3GAL2:70381862:-:rev","AARS--ST3GAL2","ENSG00000090861","ENSG00000157350",21.0,1.0,1.0,1.0,0.869754601961311,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","5:RANBP17:170924550:+:5:KCNIP1:170718758:+:rev","RANBP17--KCNIP1","ENSG00000204764","ENSG00000182132",10.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BRCA","TCGA-BH-A0BG-01A","11:PHF21A:46076754:-:18:CCDC178:33293312:-:fusion","PHF21A--CCDC178","ENSG00000135365","ENSG00000166960",15.0,1.0,1.0,1.0,0.827,0.0]
["TCGA_BRCA","TCGA-BH-A0BP-01A","19:ZNF256:57947442:-:19:ZNF846:9763408:-:reg","ZNF256--ZNF846","ENSG00000152454","ENSG00000196605",2.0,1.0,1.0,1.0,0.808,0.0]
["TCGA_BRCA","TCGA-BH-A0BR-01A","X:SLC25A53:104156878:-:X:NXF3:103084495:-:reg","SLC25A53--NXF3","ENSG00000269743","ENSG00000147206",2.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BRCA","TCGA-BH-A0C0-01A","11:SF1:64776498:-:3:ITPR1:4627763:+:fusion","SF1--ITPR1","ENSG00000168066","ENSG00000150995",7.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_BRCA","TCGA-BH-A0C0-01A","6:PTK7:43146698:+:6:PTCRA:42923145:+:rev","PTK7--PTCRA","ENSG00000112655","ENSG00000171611",4.0,1.0,1.0,1.0,0.892,"NA"]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:MED24:40032649:-:17:LINC00469:73761026:-:rev","MED24--LINC00469","ENSG00000008838","ENSG00000177338",9.0,1.0,1.0,1.0,0.372,0.0337078651685]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:USP22:21042665:-:17:MYO19:36496406:-:rev","USP22--MYO19","ENSG00000124422","ENSG00000278259",12.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BRCA","TCGA-BH-A0DI-01A","3:PLD1:171771195:-:3:KCNMB2-AS1:178749236:-:rev","PLD1--KCNMB2-AS1","ENSG00000075651","ENSG00000237978",4.0,1.0,1.0,1.0,0.877,0.0059880239521]
["TCGA_BRCA","TCGA-BH-A0DQ-01A","14:ACTN1:68877082:-:6:SCGN:25691056:+:fusion","ACTN1--SCGN","ENSG00000072110","ENSG00000079689",12.0,1.0,1.0,1.0,0.543,0.0157068062827]
["TCGA_BRCA","TCGA-BH-A0E2-01A","2:PAPOLG:60756495:+:14:LINC00871:46438181:+:fusion","PAPOLG--LINC00871","ENSG00000115421","ENSG00000258700",4.0,1.0,1.0,1.0,0.94,0.00323624595469]
["TCGA_BRCA","TCGA-BH-A0EE-01A","17:FBXL20:39298990:-:17:RHBDF2:76487909:-:rev","FBXL20--RHBDF2","ENSG00000108306","ENSG00000129667",9.0,1.0,1.0,1.0,0.368,0.00743494423792]
["TCGA_BRCA","TCGA-BH-A0GY-01A","1:PTGFRN:116949572:+:1:AGBL4:49697437:-:strandcross","PTGFRN--AGBL4","ENSG00000134247","ENSG00000186094",4.0,1.0,1.0,1.0,0.665,0.0149253731343]
["TCGA_BRCA","TCGA-BH-A0H7-01A","20:PRELID3B:59042699:-:20:PTPRT:42885932:-:reg","PRELID3B--PTPRT","ENSG00000101166","ENSG00000196090",9.0,2.0,2.0,2.0,0.847,0.0]
["TCGA_BRCA","TCGA-BH-A0H7-01A","22:SPECC1L:24276803:+:20:NELFCD:58986093:+:fusion","SPECC1L--NELFCD","ENSG00000100014","ENSG00000101158",7.0,2.0,1.0,1.0,0.983,0.0]
["TCGA_BRCA","TCGA-BH-A0H9-01A","12:AC134511.1:67069050:-:12:SLC16A7:59655152:+:strandcross","AC134511.1--SLC16A7","ENSG00000256248","ENSG00000118596",3.0,1.0,1.0,1.0,0.636,0.0]
["TCGA_BRCA","TCGA-BH-A0HB-01A","17:TRIM37:59104293:-:17:TUBD1:59860424:-:rev","TRIM37--TUBD1","ENSG00000108395","ENSG00000108423",7.0,1.0,1.0,1.0,0.876,"NA"]
["TCGA_BRCA","TCGA-BH-A0HL-01A","5:STK10:172187887:-:5:SNX2:122826050:+:strandcross","STK10--SNX2","ENSG00000072786","ENSG00000205302",13.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_BRCA","TCGA-BH-A0HY-01A","4:SEPT11:76949930:+:4:AC079160.1:83811645:-:strandcross","SEPT11--AC079160.1","ENSG00000138758","ENSG00000250546",27.0,1.0,1.0,1.0,0.894999008553909,0.0]
["TCGA_BRCA","TCGA-BH-A0W3-01A","11:LRTOMT:72095096:+:11:AP001528.2:86922098:-:strandcross","LRTOMT--AP001528.2","ENSG00000184154","ENSG00000255471",10.0,1.0,1.0,1.0,0.603,0.00581395348837]
["TCGA_BRCA","TCGA-BH-A0WA-01A","19:SIX5:45768042:-:19:DMPK:45775034:-:rev","SIX5--DMPK","ENSG00000177045","ENSG00000104936",2.0,1.0,1.0,1.0,0.966,"NA"]
["TCGA_BRCA","TCGA-BH-A18J-01A","1:HIVEP3:41700916:-:1:CREB3L4:153973195:+:strandcross","HIVEP3--CREB3L4","ENSG00000127124","ENSG00000143578",5.0,1.0,1.0,1.0,0.466,0.03125]
["TCGA_BRCA","TCGA-BH-A18K-01A","19:ZNF492:22634474:+:19:NLRP5:56040922:+:reg","ZNF492--NLRP5","ENSG00000229676","ENSG00000171487",6.0,1.0,1.0,1.0,0.503,0.00993377483444]
["TCGA_BRCA","TCGA-BH-A18Q-01A","1:KIAA0319L:35554350:-:X:PAGE2B:55076034:+:fusion","KIAA0319L--PAGE2B","ENSG00000142687","ENSG00000238269",5.0,1.0,1.0,1.0,0.229,0.0317002881844]
["TCGA_BRCA","TCGA-BH-A18R-01A","17:LUC7L3:50737479:+:17:C17orf64:60426718:+:reg","LUC7L3--C17orf64","ENSG00000108848","ENSG00000141371",8.0,1.0,1.0,1.0,0.313,0.0259365994236]
["TCGA_BRCA","TCGA-BH-A18T-01A","4:AC108866.1:120067001:+:4:SYNPO2:119026627:+:rev","AC108866.1--SYNPO2","ENSG00000250938","ENSG00000172403",5.0,1.0,1.0,1.0,0.972,0.0]
["TCGA_BRCA","TCGA-BH-A18T-01A","2:WDSUB1:159279761:-:2:BAZ2B:159332686:-:rev","WDSUB1--BAZ2B","ENSG00000196151","ENSG00000123636",2.0,1.0,1.0,1.0,0.882,"NA"]
["TCGA_BRCA","TCGA-BH-A18U-01A","7:BZW2:16646304:+:4:CLCN3:169680050:+:fusion","BZW2--CLCN3","ENSG00000136261","ENSG00000109572",3.0,1.0,1.0,1.0,0.773,0.0]
["TCGA_BRCA","TCGA-BH-A18V-01A","3:FOXP1:71493426:-:3:EIF4E3:71710484:-:rev","FOXP1--EIF4E3","ENSG00000114861","ENSG00000163412",7.0,3.0,2.0,2.0,0.42,"NA"]
["TCGA_BRCA","TCGA-BH-A18V-06A","15:PKM:72209673:-:17:TRPV3:3532937:-:fusion","PKM--TRPV3","ENSG00000067225","ENSG00000167723",2.0,1.0,1.0,1.0,0.975,0.00169491525424]
["TCGA_BRCA","TCGA-BH-A1EN-01A","17:ERBB2:39710481:+:11:NARS2:78436814:-:fusion","ERBB2--NARS2","ENSG00000141736","ENSG00000137513",675.0,1.0,1.0,1.0,0.999995681038024,0.0]
["TCGA_BRCA","TCGA-BH-A1ES-06A","17:SEPT9:77320348:+:17:ARSG:68343604:+:rev","SEPT9--ARSG","ENSG00000184640","ENSG00000141337",10.0,1.0,1.0,1.0,0.746,0.0076726342711]
["TCGA_BRCA","TCGA-BH-A1EV-01A","17:RARA:40352507:+:17:TBC1D3F:36433534:-:strandcross","RARA--TBC1D3F","ENSG00000131759","ENSG00000275954",17.0,1.0,1.0,1.0,0.485955979349212,0.0141843971631]
["TCGA_BRCA","TCGA-BH-A1EW-01A","12:YEATS4:69370975:+:12:GRIP1:66465422:-:strandcross","YEATS4--GRIP1","ENSG00000127337","ENSG00000155974",94.0,2.0,2.0,2.0,0.958636153044377,0.0]
["TCGA_BRCA","TCGA-BH-A1EY-01A","6:LRRC1:53904462:+:10:TMEM254-AS1:80060933:-:fusion","LRRC1--TMEM254-AS1","ENSG00000137269","ENSG00000230091",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BRCA","TCGA-BH-A1F0-01A","3:ABHD14B:51973965:-:3:POC1A:52075985:-:rev","ABHD14B--POC1A","ENSG00000090097","ENSG00000164087",6.0,1.0,1.0,1.0,0.8,"NA"]
["TCGA_BRCA","TCGA-BH-A1F6-01A","7:SRPK2:105388648:-:7:PUS7:105472193:-:rev","SRPK2--PUS7","ENSG00000135250","ENSG00000091127",19.0,2.0,1.0,1.0,0.906038578371215,"NA"]
["TCGA_BRCA","TCGA-BH-A1FC-01A","5:TMEM161B:88268721:-:5:TMEM161B-AS1:88410073:+:strandcross","TMEM161B--TMEM161B-AS1","ENSG00000164180","ENSG00000247828",2.0,2.0,3.0,2.0,0.997,0.0]
["TCGA_BRCA","TCGA-BH-A1FD-01A","6:UTRN:144730486:+:6:PRKN:162262765:-:strandcross","UTRN--PRKN","ENSG00000152818","ENSG00000185345",4.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-BH-A1FD-01A","8:GOLGA7:41490965:+:8:PVT1:127989162:+:reg","GOLGA7--PVT1","ENSG00000147533","ENSG00000249859",10.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-BH-A1FE-01A","6:C6orf203:107040230:+:6:BEND3:107070950:-:strandcross","C6orf203--BEND3","ENSG00000130349","ENSG00000178409",9.0,1.0,1.0,1.0,0.231,0.00714285714286]
["TCGA_BRCA","TCGA-BH-A1FH-01A","2:OLA1:174223033:-:2:METTL8:171360513:-:reg","OLA1--METTL8","ENSG00000138430","ENSG00000123600",8.0,1.0,1.0,1.0,0.783,0.00566037735849]
["TCGA_BRCA","TCGA-BH-A1FM-01A","2:KCNJ3:154709819:+:2:GALNT13:154395991:+:rev","KCNJ3--GALNT13","ENSG00000162989","ENSG00000144278",6.0,1.0,1.0,1.0,0.74,"NA"]
["TCGA_BRCA","TCGA-BH-A201-01A","13:PIBF1:72931267:+:13:BORA:72753690:+:rev","PIBF1--BORA","ENSG00000083535","ENSG00000136122",2.0,1.0,1.0,1.0,0.688,"NA"]
["TCGA_BRCA","TCGA-BH-A203-01A","1:RPS6KC1:213104569:+:1:CATSPERE:244552322:+:reg","RPS6KC1--CATSPERE","ENSG00000136643","ENSG00000179397",11.0,1.0,1.0,1.0,0.952,0.0]
["TCGA_BRCA","TCGA-BH-A204-01A","8:LINC01605:37473078:-:14:NPAS3:33055905:+:fusion","LINC01605--NPAS3","ENSG00000253161","ENSG00000151322",9.0,1.0,1.0,1.0,0.193,0.0282258064516]
["TCGA_BRCA","TCGA-BH-A209-01A","5:ANKHD1-EIF4EBP3:140487060:+:5:PCDHGA4:141505393:+:reg","ANKHD1-EIF4EBP3--PCDHGA4","ENSG00000131503","ENSG00000204956",34.0,1.0,1.0,1.0,0.837231666875215,0.0032154340836]
["TCGA_BRCA","TCGA-BH-A8FY-01A","1:PBXIP1:154956069:-:1:ACBD6:180314722:-:rev","PBXIP1--ACBD6","ENSG00000163346","ENSG00000230124",10.0,1.0,1.0,1.0,0.205,0.0243902439024]
["TCGA_BRCA","TCGA-C8-A12K-01A","1:ZNF678:227563724:+:1:LINC01641:227409755:+:rev","ZNF678--LINC01641","ENSG00000181450","ENSG00000234277",13.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BRCA","TCGA-C8-A12L-01A","19:RPL36:5690327:+:19:MFSD12:3544939:-:strandcross","RPL36--MFSD12","ENSG00000130255","ENSG00000161091",24.0,1.0,1.0,1.0,0.853899459115233,0.00248138957816]
["TCGA_BRCA","TCGA-C8-A12M-01A","11:ATG16L2:72827293:+:X:AKAP17A:1593444:+:fusion","ATG16L2--AKAP17A","ENSG00000168010","ENSG00000197976",13.0,1.0,1.0,1.0,0.48,0.0146627565982]
["TCGA_BRCA","TCGA-C8-A12M-01A","17:RPTOR:80545791:+:17:ANKFN1:56227917:+:rev","RPTOR--ANKFN1","ENSG00000141564","ENSG00000153930",3.0,1.0,1.0,1.0,0.984,0.00293255131965]
["TCGA_BRCA","TCGA-C8-A12P-01A","15:ANXA2:60351193:-:20:RNF114:49949248:+:fusion","ANXA2--RNF114","ENSG00000182718","ENSG00000124226",965.0,1.0,1.0,1.0,0.176927738159104,0.0331125827815]
["TCGA_BRCA","TCGA-C8-A12P-01A","18:ROCK1:21110818:-:18:ABHD3:21702498:-:rev","ROCK1--ABHD3","ENSG00000067900","ENSG00000158201",3.0,1.0,1.0,1.0,0.837,"NA"]
["TCGA_BRCA","TCGA-C8-A12Q-01A","3:STT3B:31533312:+:3:AC097103.2:139577792:+:reg","STT3B--AC097103.2","ENSG00000163527","ENSG00000248932",12.0,1.0,1.0,1.0,0.408,0.0209973753281]
["TCGA_BRCA","TCGA-C8-A12Q-01A","3:GFM1:158666386:+:3:MLF1:158592434:+:rev","GFM1--MLF1","ENSG00000168827","ENSG00000178053",111.0,1.0,1.0,1.0,0.954792188463571,"NA"]
["TCGA_BRCA","TCGA-C8-A12U-01A","6:TFEB:41735350:-:2:LINC01886:107555133:+:fusion","TFEB--LINC01886","ENSG00000112561","ENSG00000224568",4.0,1.0,1.0,1.0,0.311,0.0366972477064]
["TCGA_BRCA","TCGA-C8-A12Y-01A","3:MBNL1:152300367:+:3:NAALADL2:174737641:+:reg","MBNL1--NAALADL2","ENSG00000152601","ENSG00000177694",8.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-C8-A130-01A","21:DYRK1A:37472880:+:20:ZBTB46:63790790:-:fusion","DYRK1A--ZBTB46","ENSG00000157540","ENSG00000130584",38.0,1.0,1.0,1.0,0.920205626458,0.0]
["TCGA_BRCA","TCGA-C8-A132-01A","3:PSMD2:184304391:+:3:ECE2:184287837:+:rev","PSMD2--ECE2","ENSG00000175166","ENSG00000145194",20.0,1.0,1.0,1.0,0.882216212257694,"NA"]
["TCGA_BRCA","TCGA-C8-A135-01A","11:PACS1:66070842:+:11:ZDHHC24:66527006:-:strandcross","PACS1--ZDHHC24","ENSG00000175115","ENSG00000174165",4.0,1.0,1.0,1.0,0.772,0.00847457627119]
["TCGA_BRCA","TCGA-C8-A135-01A","19:C19orf47:40322028:-:19:BLVRB:40458545:-:rev","C19orf47--BLVRB","ENSG00000160392","ENSG00000090013",4.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-C8-A137-01A","17:GRB7:39738133:+:17:ERBB2:39708321:+:rev","GRB7--ERBB2","ENSG00000141738","ENSG00000141736",2.0,1.0,1.0,1.0,0.736,"NA"]
["TCGA_BRCA","TCGA-C8-A1HI-01A","17:TNRC6C:78051448:+:15:SCAPER:76404679:-:fusion","TNRC6C--SCAPER","ENSG00000078687","ENSG00000140386",3.0,1.0,1.0,1.0,0.759,0.00418410041841]
["TCGA_BRCA","TCGA-C8-A1HL-01A","17:APPBP2:60525794:-:17:DNAH17:78441199:-:rev","APPBP2--DNAH17","ENSG00000062725","ENSG00000187775",7.0,1.0,1.0,1.0,0.641,0.00684931506849]
["TCGA_BRCA","TCGA-C8-A1HN-01A","3:RPL24:101682429:-:3:AC110491.2:97837082:-:reg","RPL24--AC110491.2","ENSG00000114391","ENSG00000279658",21.0,1.0,1.0,1.0,0.732641440044702,0.00540540540541]
["TCGA_BRCA","TCGA-C8-A1HO-01A","17:GRB2:75405489:-:17:TEX14:58630554:-:reg","GRB2--TEX14","ENSG00000177885","ENSG00000121101",3.0,1.0,1.0,1.0,0.282,0.0297397769517]
["TCGA_BRCA","TCGA-C8-A26W-01A","19:NACC1:13118454:+:19:DOCK6:11233366:-:strandcross","NACC1--DOCK6","ENSG00000160877","ENSG00000130158",7.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_BRCA","TCGA-C8-A26Y-01A","19:ZNF567:36689497:+:19:ZNF761:53447196:+:reg","ZNF567--ZNF761","ENSG00000189042","ENSG00000160336",3.0,1.0,1.0,1.0,0.203,0.0259179265659]
["TCGA_BRCA","TCGA-C8-A273-01A","17:CPD:30385236:+:17:SKAP1:48396785:-:strandcross","CPD--SKAP1","ENSG00000108582","ENSG00000141293",4.0,1.0,1.0,1.0,0.557,0.0102249488753]
["TCGA_BRCA","TCGA-C8-A275-01A","17:MKS1:58212378:-:17:CCR7:40558942:-:reg","MKS1--CCR7","ENSG00000011143","ENSG00000126353",1.0,1.0,1.0,1.0,0.736,0.00721500721501]
["TCGA_BRCA","TCGA-C8-A275-01A","17:TANC2:63009626:+:17:SSH2:29677741:-:strandcross","TANC2--SSH2","ENSG00000170921","ENSG00000141298",9.0,1.0,1.0,1.0,0.614,0.011544011544]
["TCGA_BRCA","TCGA-C8-A278-01A","1:NFIA:61359274:+:1:AC099792.1:60826585:-:strandcross","NFIA--AC099792.1","ENSG00000162599","ENSG00000231252",6.0,1.0,1.0,1.0,0.973,0.0]
["TCGA_BRCA","TCGA-C8-A27A-01A","8:PDE7A:65745407:-:15:AC020687.1:87542997:-:fusion","PDE7A--AC020687.1","ENSG00000205268","ENSG00000259560",4.0,1.0,1.0,1.0,0.863,0.0018018018018]
["TCGA_BRCA","TCGA-C8-A8HQ-01A","11:C11orf80:66759096:+:11:PPP6R3:68505145:+:reg","C11orf80--PPP6R3","ENSG00000173715","ENSG00000110075",2.0,1.0,1.0,1.0,0.764,0.00235294117647]
["TCGA_BRCA","TCGA-D8-A13Z-01A","4:ARFIP1:152829726:+:4:FGB:154565808:+:reg","ARFIP1--FGB","ENSG00000164144","ENSG00000171564",10.0,1.0,1.0,1.0,0.665,0.00451467268623]
["TCGA_BRCA","TCGA-D8-A140-01A","11:INTS4:77901421:-:11:NDUFC2-KCTD14:78017270:-:rev","INTS4--NDUFC2-KCTD14","ENSG00000149262","ENSG00000151364",3.0,1.0,1.0,1.0,0.736,"NA"]
["TCGA_BRCA","TCGA-D8-A142-01A","11:LDLRAD3:36001186:+:11:ELP4:31783393:+:rev","LDLRAD3--ELP4","ENSG00000179241","ENSG00000109911",6.0,1.0,1.0,1.0,0.83,0.00405679513185]
["TCGA_BRCA","TCGA-D8-A147-01A","19:RPS19:41861212:+:21:C21orf91-OT1:17767698:-:fusion","RPS19--C21orf91-OT1","ENSG00000105372","ENSG00000240770",16.0,1.0,1.0,1.0,0.611809999375853,0.00602409638554]
["TCGA_BRCA","TCGA-D8-A1J9-01A","9:C9orf3:94792918:+:9:UBAP2:33960878:-:strandcross","C9orf3--UBAP2","ENSG00000148120","ENSG00000137073",2.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_BRCA","TCGA-D8-A1JD-01A","11:AP002495.2:71916074:-:11:RBM14-RBM4:66639700:+:strandcross","AP002495.2--RBM14-RBM4","ENSG00000254469","ENSG00000248643",2.0,1.0,1.0,1.0,0.84,0.00539083557951]
["TCGA_BRCA","TCGA-D8-A1JI-01A","9:SPTAN1:128552696:+:7:CADPS2:122737068:-:fusion","SPTAN1--CADPS2","ENSG00000197694","ENSG00000081803",30.0,1.0,1.0,1.0,0.153801175657551,0.0448877805486]
["TCGA_BRCA","TCGA-D8-A1JL-01A","5:HSPA9:138567455:-:5:ARL15:53886713:-:reg","HSPA9--ARL15","ENSG00000113013","ENSG00000185305",22.0,1.0,1.0,1.0,0.296387585483505,0.0131147540984]
["TCGA_BRCA","TCGA-D8-A1JM-01A","16:AC106886.5:30741908:+:16:MVP:29840178:+:rev","AC106886.5--MVP","ENSG00000282034","ENSG00000013364",136.0,1.0,1.0,1.0,0.957370924556716,"NA"]
["TCGA_BRCA","TCGA-D8-A1JM-01A","22:CACNA1I:39662435:+:22:TAB1:39426703:+:rev","CACNA1I--TAB1","ENSG00000100346","ENSG00000100324",3.0,1.0,1.0,1.0,0.643,"NA"]
["TCGA_BRCA","TCGA-D8-A1X5-01A","8:SLC39A14:22367408:+:8:PRKDC:47849503:-:strandcross","SLC39A14--PRKDC","ENSG00000104635","ENSG00000253729",4.0,1.0,1.0,1.0,0.887,0.0]
["TCGA_BRCA","TCGA-D8-A1X9-01A","1:DNTTIP2:93876268:-:1:GCLM:93901669:-:rev","DNTTIP2--GCLM","ENSG00000067334","ENSG00000023909",5.0,1.0,1.0,1.0,0.609,"NA"]
["TCGA_BRCA","TCGA-D8-A1XD-01A","20:TMEM189:50153517:-:19:KCNC3:50324082:-:fusion","TMEM189--KCNC3","ENSG00000124208","ENSG00000131398",11.0,1.0,1.0,1.0,0.714,0.0122448979592]
["TCGA_BRCA","TCGA-D8-A1XJ-01A","17:STARD3:39653750:+:17:C17orf98:38837240:-:strandcross","STARD3--C17orf98","ENSG00000131748","ENSG00000275489",31.0,1.0,1.0,1.0,0.674929442731344,0.00615384615385]
["TCGA_BRCA","TCGA-D8-A1XK-01A","2:ITGB6:160195369:-:2:RBMS1:160432477:-:rev","ITGB6--RBMS1","ENSG00000115221","ENSG00000153250",10.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_BRCA","TCGA-D8-A1XQ-01A","20:ATP9A:51768302:-:20:SALL4:51784684:-:rev","ATP9A--SALL4","ENSG00000054793","ENSG00000101115",2.0,1.0,1.0,1.0,0.475,"NA"]
["TCGA_BRCA","TCGA-D8-A1XW-01A","3:LPP:188341719:+:3:ADIPOQ:186853051:+:rev","LPP--ADIPOQ","ENSG00000145012","ENSG00000181092",16.0,1.0,1.0,1.0,0.841654211990328,0.00619834710744]
["TCGA_BRCA","TCGA-D8-A1XZ-01A","1:ACOT7:6281102:-:1:FUCA1:23854560:-:rev","ACOT7--FUCA1","ENSG00000097021","ENSG00000179163",23.0,1.0,1.0,1.0,0.744015127765764,0.0089605734767]
["TCGA_BRCA","TCGA-D8-A1XZ-01A","19:PAK4:39125919:+:19:CATSPERG:38370159:+:rev","PAK4--CATSPERG","ENSG00000130669","ENSG00000099338",2.0,1.0,1.0,1.0,0.419,"NA"]
["TCGA_BRCA","TCGA-D8-A27G-01A","17:SEPT9:77307197:+:17:KANSL1-AS1:46196368:+:rev","SEPT9--KANSL1-AS1","ENSG00000184640","ENSG00000214401",88.0,1.0,1.0,1.0,0.94717879358089,0.0]
["TCGA_BRCA","TCGA-D8-A27H-01A","1:TARBP1:234446803:-:1:RBM34:235131997:-:rev","TARBP1--RBM34","ENSG00000059588","ENSG00000188739",12.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BRCA","TCGA-D8-A27M-01A","5:RASGEF1C:180209028:-:5:MAPK9:180280608:-:rev","RASGEF1C--MAPK9","ENSG00000146090","ENSG00000050748",1.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BRCA","TCGA-D8-A27N-01A","8:TNKS:9615677:+:8:ASAH1:18064531:-:strandcross","TNKS--ASAH1","ENSG00000173273","ENSG00000104763",16.0,1.0,1.0,1.0,0.85047910493498,0.00527704485488]
["TCGA_BRCA","TCGA-D8-A27R-01A","2:SLC4A10:161424716:+:2:PSMD14:161395078:+:rev","SLC4A10--PSMD14","ENSG00000144290","ENSG00000115233",2.0,1.0,1.0,1.0,0.779,"NA"]
["TCGA_BRCA","TCGA-D8-A3Z5-01A","14:ERO1A:52671630:-:14:HECTD1:31103066:-:reg","ERO1A--HECTD1","ENSG00000197930","ENSG00000092148",3.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_BRCA","TCGA-E2-A106-01A","8:AC068992.1:16844105:-:8:PDGFRL:17589468:+:strandcross","AC068992.1--PDGFRL","ENSG00000253496","ENSG00000104213",9.0,1.0,1.0,1.0,0.909,0.00416666666667]
["TCGA_BRCA","TCGA-E2-A109-01A","17:EVPL:76027101:-:17:MAP2K6:69505780:+:strandcross","EVPL--MAP2K6","ENSG00000167880","ENSG00000108984",45.0,1.0,1.0,1.0,0.981518421006949,0.0]
["TCGA_BRCA","TCGA-E2-A10A-01A","14:NEMF:49838139:-:14:AL157688.1:87332204:+:strandcross","NEMF--AL157688.1","ENSG00000165525","ENSG00000258958",42.0,1.0,1.0,1.0,0.929916180963421,0.00320512820513]
["TCGA_BRCA","TCGA-E2-A14N-01A","3:CTNNB1:41199670:+:3:THRB:24229001:-:strandcross","CTNNB1--THRB","ENSG00000168036","ENSG00000151090",5.0,1.0,1.0,1.0,0.938,0.0]
["TCGA_BRCA","TCGA-E2-A14P-01A","20:STAU1:49174195:-:20:KCNB1:49299383:-:rev","STAU1--KCNB1","ENSG00000124214","ENSG00000158445",7.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_BRCA","TCGA-E2-A14R-01A","20:TOP1:41061490:+:12:PZP:9203951:-:fusion","TOP1--PZP","ENSG00000198900","ENSG00000126838",8.0,1.0,1.0,1.0,0.34,0.015037593985]
["TCGA_BRCA","TCGA-E2-A14S-01A","6:GTF3C6:110959252:+:6:AFG1L:108510212:+:rev","GTF3C6--AFG1L","ENSG00000155115","ENSG00000135537",55.0,1.0,1.0,1.0,0.914251273050449,0.00522193211488]
["TCGA_BRCA","TCGA-E2-A14T-01A","16:PAM16:4350935:-:16:CDIP1:4514664:-:rev","PAM16--CDIP1","ENSG00000217930","ENSG00000089486",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-E2-A14V-01A","17:KSR1:27456874:+:17:MSI2:57401379:+:reg","KSR1--MSI2","ENSG00000141068","ENSG00000153944",15.0,1.0,1.0,1.0,0.367,0.00473933649289]
["TCGA_BRCA","TCGA-E2-A14W-01A","1:LIX1L-AS1:145927657:+:1:POLR3C:145838056:+:rev","LIX1L-AS1--POLR3C","ENSG00000234222","ENSG00000186141",3.0,1.0,1.0,1.0,0.955,"NA"]
["TCGA_BRCA","TCGA-E2-A14Z-01A","2:RAPH1:203535111:-:2:AC009299.3:161223483:-:reg","RAPH1--AC009299.3","ENSG00000173166","ENSG00000235724",5.0,1.0,1.0,1.0,0.906,0.00719424460432]
["TCGA_BRCA","TCGA-E2-A154-01A","12:SSH1:108805056:-:5:ATG10:81987559:+:fusion","SSH1--ATG10","ENSG00000084112","ENSG00000152348",6.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BRCA","TCGA-E2-A158-01A","15:BBS4:72712307:+:14:AL355922.5:20898181:-:fusion","BBS4--AL355922.5","ENSG00000140463","ENSG00000258918",4.0,1.0,1.0,1.0,0.689,0.00574712643678]
["TCGA_BRCA","TCGA-E2-A15A-01A","11:FAM168A:73597923:-:11:UVRAG:75861746:+:strandcross","FAM168A--UVRAG","ENSG00000054965","ENSG00000198382",5.0,2.0,2.0,2.0,0.851,0.0]
["TCGA_BRCA","TCGA-E2-A15A-01A","8:NSD3:38381799:-:8:ANK1:41758137:-:rev","NSD3--ANK1","ENSG00000147548","ENSG00000029534",4.0,1.0,1.0,1.0,0.642,0.00849858356941]
["TCGA_BRCA","TCGA-E2-A15A-06A","8:ASH2L:38114287:+:20:MGME1:17988166:+:fusion","ASH2L--MGME1","ENSG00000129691","ENSG00000125871",6.0,2.0,2.0,2.0,0.999,0.0]
["TCGA_BRCA","TCGA-E2-A15E-06A","2:ANTXR1:69124643:+:2:PLEK:68380328:+:rev","ANTXR1--PLEK","ENSG00000169604","ENSG00000115956",2.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BRCA","TCGA-E2-A15H-01A","17:MSI2:57401471:+:17:WIPF2:40256391:+:rev","MSI2--WIPF2","ENSG00000153944","ENSG00000171475",6.0,1.0,1.0,1.0,0.472,0.0190839694656]
["TCGA_BRCA","TCGA-E2-A15M-01A","2:NCK2:105816613:+:2:MRPS9:105071313:+:rev","NCK2--MRPS9","ENSG00000071051","ENSG00000135972",2.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_BRCA","TCGA-E2-A15S-01A","2:SESTD1:179264499:-:2:ACMSD:134898341:+:strandcross","SESTD1--ACMSD","ENSG00000187231","ENSG00000153086",4.0,1.0,1.0,1.0,0.917,0.0]
["TCGA_BRCA","TCGA-E2-A1B0-01A","8:NCALD:101719252:-:8:SYBU:109619039:-:rev","NCALD--SYBU","ENSG00000104490","ENSG00000147642",4.0,1.0,1.0,1.0,0.248,0.0191387559809]
["TCGA_BRCA","TCGA-E2-A1B6-01A","1:H6PD:9247083:+:1:HIVEP3:41700995:-:strandcross","H6PD--HIVEP3","ENSG00000049239","ENSG00000127124",8.0,1.0,1.0,1.0,0.974,0.00228310502283]
["TCGA_BRCA","TCGA-E2-A1IH-01A","8:ANK1:41733971:-:8:ADAM7:24526755:+:strandcross","ANK1--ADAM7","ENSG00000029534","ENSG00000069206",18.0,1.0,1.0,1.0,0.900181551317993,0.00508905852417]
["TCGA_BRCA","TCGA-E2-A1L7-01A","12:NUAK1:106070774:-:12:AC023509.3:53507142:-:reg","NUAK1--AC023509.3","ENSG00000074590","ENSG00000267281",2.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_BRCA","TCGA-E2-A1LB-01A","17:MYO1D:32876778:-:17:TMIGD1:30329529:-:reg","MYO1D--TMIGD1","ENSG00000176658","ENSG00000182271",13.0,1.0,2.0,1.0,0.96,0.00436681222707]
["TCGA_BRCA","TCGA-E2-A1LE-01A","5:DCP2:113008042:+:5:SRP19:112867404:+:rev","DCP2--SRP19","ENSG00000172795","ENSG00000258864",35.0,1.0,1.0,1.0,0.890116959392573,"NA"]
["TCGA_BRCA","TCGA-E2-A1LL-01A","10:LCOR:96832399:+:12:CPNE8:38702921:-:fusion","LCOR--CPNE8","ENSG00000196233","ENSG00000139117",3.0,1.0,1.0,1.0,0.271,0.0194552529183]
["TCGA_BRCA","TCGA-E2-A1LL-01A","10:DNAJC9:73243843:-:10:CFAP70:73256416:-:rev","DNAJC9--CFAP70","ENSG00000213551","ENSG00000156042",1.0,2.0,2.0,2.0,0.842,"NA"]
["TCGA_BRCA","TCGA-E2-A1LL-01A","10:FGFR2:121496532:-:10:NSMCE4A:121971069:-:rev","FGFR2--NSMCE4A","ENSG00000066468","ENSG00000107672",2.0,1.0,1.0,1.0,0.659,"NA"]
["TCGA_BRCA","TCGA-E2-A572-01A","11:CPT1A:68812437:-:11:AP004243.1:60741030:+:strandcross","CPT1A--AP004243.1","ENSG00000110090","ENSG00000214782",15.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-E2-A9RU-01A","8:PPP2R2A:26354633:+:8:LGI3:22152000:-:strandcross","PPP2R2A--LGI3","ENSG00000221914","ENSG00000168481",5.0,1.0,1.0,1.0,0.724,0.00917431192661]
["TCGA_BRCA","TCGA-E9-A1N8-01A","16:AC106886.2:30741908:+:9:GABBR2:98578072:-:fusion","AC106886.2--GABBR2","ENSG00000282034","ENSG00000136928",3.0,1.0,1.0,1.0,0.242,0.0229885057471]
["TCGA_BRCA","TCGA-E9-A1N9-01A","8:ERLIN2:37744696:+:8:RAB11FIP1:37877551:-:strandcross","ERLIN2--RAB11FIP1","ENSG00000147475","ENSG00000156675",30.0,1.0,1.0,1.0,0.905763335569794,0.0]
["TCGA_BRCA","TCGA-E9-A1NA-01A","1:LYST:235866843:-:1:AL513283.1:219411939:-:reg","LYST--AL513283.1","ENSG00000143669","ENSG00000228536",4.0,1.0,1.0,1.0,0.258,0.0190217391304]
["TCGA_BRCA","TCGA-E9-A1NA-01A","12:SRGAP1:63844883:+:12:TMEM5:63781019:+:rev","SRGAP1--TMEM5","ENSG00000196935","ENSG00000118600",5.0,1.0,1.0,1.0,0.47,"NA"]
["TCGA_BRCA","TCGA-E9-A1ND-01A","8:FAM160B2:22089854:+:8:DMTN:22069881:+:rev","FAM160B2--DMTN","ENSG00000158863","ENSG00000158856",2.0,1.0,1.0,1.0,0.401,"NA"]
["TCGA_BRCA","TCGA-E9-A1NF-01A","2:RANBP2:108719678:+:2:LINC01789:107266708:-:strandcross","RANBP2--LINC01789","ENSG00000153201","ENSG00000229457",3.0,1.0,1.0,1.0,0.862,0.00313479623824]
["TCGA_BRCA","TCGA-E9-A1R4-01A","17:SLC9A3R1:74749287:+:3:NR2C2:15003876:+:fusion","SLC9A3R1--NR2C2","ENSG00000109062","ENSG00000177463",4.0,1.0,1.0,1.0,0.436,0.0105540897098]
["TCGA_BRCA","TCGA-E9-A1R7-01A","1:TRIM62:33158253:-:1:LINC01135:58893545:+:strandcross","TRIM62--LINC01135","ENSG00000116525","ENSG00000234807",5.0,1.0,1.0,1.0,0.697,0.0105540897098]
["TCGA_BRCA","TCGA-E9-A1RC-01A","5:RASA1:87353235:+:5:AC010280.2:68433585:-:strandcross","RASA1--AC010280.2","ENSG00000145715","ENSG00000248884",6.0,1.0,1.0,1.0,0.925,0.0]
["TCGA_BRCA","TCGA-E9-A1RF-01A","19:NR1H2:50329795:+:19:ZNF610:52347707:+:reg","NR1H2--ZNF610","ENSG00000131408","ENSG00000167554",3.0,1.0,1.0,1.0,0.791,0.00793650793651]
["TCGA_BRCA","TCGA-E9-A1RF-01A","14:TTC6:37623003:+:14:MIPOL1:37546905:+:rev","TTC6--MIPOL1","ENSG00000139865","ENSG00000151338",2.0,6.0,5.0,4.0,0.878,"NA"]
["TCGA_BRCA","TCGA-E9-A228-01A","11:CTTN:70398614:+:11:FOLR1:72190576:+:reg","CTTN--FOLR1","ENSG00000085733","ENSG00000110195",21.0,1.0,1.0,1.0,0.887348327693454,0.0]
["TCGA_BRCA","TCGA-E9-A229-01A","1:GPR157:9128645:-:1:GON4L:155785374:-:rev","GPR157--GON4L","ENSG00000180758","ENSG00000116580",3.0,1.0,1.0,1.0,0.95,0.0]
["TCGA_BRCA","TCGA-E9-A22D-01A","17:AKAP10:19958014:-:11:AP005135.1:135061947:-:fusion","AKAP10--AP005135.1","ENSG00000108599","ENSG00000255512",3.0,1.0,1.0,1.0,0.942,0.00260078023407]
["TCGA_BRCA","TCGA-E9-A22D-01A","1:TTC13:230943806:-:9:JAK2:5064883:+:fusion","TTC13--JAK2","ENSG00000143643","ENSG00000096968",3.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-E9-A22G-01A","1:SNHG3:28508160:+:17:BIRC5:78216664:+:fusion","SNHG3--BIRC5","ENSG00000180198","ENSG00000089685",2.0,1.0,1.0,1.0,0.776,0.00566037735849]
["TCGA_BRCA","TCGA-E9-A243-01A","22:MCM5:35408563:+:22:TOM1:35327271:+:rev","MCM5--TOM1","ENSG00000100297","ENSG00000100284",2.0,1.0,1.0,1.0,0.625,"NA"]
["TCGA_BRCA","TCGA-E9-A244-01A","7:CALD1:134779749:+:7:LRGUK:134247556:+:rev","CALD1--LRGUK","ENSG00000122786","ENSG00000155530",160.0,1.0,1.0,1.0,0.993395936687142,"NA"]
["TCGA_BRCA","TCGA-E9-A248-01A","6:ARID1B:156829421:+:6:AL590867.1:153346446:+:rev","ARID1B--AL590867.1","ENSG00000049618","ENSG00000213121",42.0,1.0,1.0,1.0,0.378535107702832,0.00904159132007]
["TCGA_BRCA","TCGA-E9-A2JS-01A","3:TRAK1:42160473:+:16:CRNDE:54853568:-:fusion","TRAK1--CRNDE","ENSG00000182606","ENSG00000245694",23.0,1.0,1.0,1.0,0.911506513856644,0.00227790432802]
["TCGA_BRCA","TCGA-E9-A5FK-01A","1:AHCYL1:109985172:+:1:DENND2D:111194726:-:strandcross","AHCYL1--DENND2D","ENSG00000168710","ENSG00000162777",4.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BRCA","TCGA-EW-A1IW-01A","11:SDHAF2:61438113:+:11:MAJIN:64960135:-:strandcross","SDHAF2--MAJIN","ENSG00000256591","ENSG00000168070",8.0,1.0,1.0,1.0,0.912,0.0]
["TCGA_BRCA","TCGA-EW-A1J1-01A","17:ARHGAP23:38486140:+:17:TEX14:58630554:-:strandcross","ARHGAP23--TEX14","ENSG00000275832","ENSG00000121101",2.0,1.0,1.0,1.0,0.875,0.00143266475645]
["TCGA_BRCA","TCGA-EW-A1J5-01A","22:PHF21B:45008545:-:22:NUP50-AS1:45138916:-:rev","PHF21B--NUP50-AS1","ENSG00000056487","ENSG00000226328",2.0,2.0,1.0,1.0,0.787,"NA"]
["TCGA_BRCA","TCGA-EW-A1OX-01A","17:BCAS3:60808076:+:17:ABCA8:68869779:-:strandcross","BCAS3--ABCA8","ENSG00000141376","ENSG00000141338",30.0,1.0,1.0,1.0,0.787087546564418,0.00311526479751]
["TCGA_BRCA","TCGA-EW-A1OZ-01A","3:PIK3CB:138834695:-:22:TSPO:43159210:+:fusion","PIK3CB--TSPO","ENSG00000051382","ENSG00000100300",2.0,1.0,1.0,1.0,0.627,0.0145348837209]
["TCGA_BRCA","TCGA-EW-A1P4-01A","3:TFDP2:142028579:-:3:PLD1:171738082:-:rev","TFDP2--PLD1","ENSG00000114126","ENSG00000075651",9.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BRCA","TCGA-EW-A1PA-01A","6:TSTD3:99521147:+:20:TSHZ2:53487144:+:fusion","TSTD3--TSHZ2","ENSG00000228439","ENSG00000182463",4.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BRCA","TCGA-EW-A1PB-01A","19:GATAD2A:19406019:+:19:MAU2:19354355:+:rev","GATAD2A--MAU2","ENSG00000167491","ENSG00000129933",8.0,1.0,1.0,1.0,0.866,"NA"]
["TCGA_BRCA","TCGA-EW-A1PF-01A","20:CHD6:41618340:-:6:MCUR1:13807044:-:fusion","CHD6--MCUR1","ENSG00000124177","ENSG00000050393",9.0,1.0,1.0,1.0,0.349,0.0167064439141]
["TCGA_BRCA","TCGA-EW-A1PH-01A","1:TSTD1:161038880:-:19:LSM14A:34194478:+:fusion","TSTD1--LSM14A","ENSG00000270149","ENSG00000257103",7.0,1.0,1.0,1.0,0.451,0.00374531835206]
["TCGA_BRCA","TCGA-EW-A2FR-01A","14:STRN3:31025904:-:8:SNTG1:49910892:+:fusion","STRN3--SNTG1","ENSG00000196792","ENSG00000147481",3.0,1.0,1.0,1.0,0.365,0.0134408602151]
["TCGA_BRCA","TCGA-EW-A2FV-01A","17:USP6:5148767:+:17:STXBP4:55141310:+:reg","USP6--STXBP4","ENSG00000129204","ENSG00000166263",14.0,1.0,1.0,1.0,0.414,0.00390625]
["TCGA_BRCA","TCGA-EW-A2FW-01A","1:FAM69A:92961376:-:1:NTNG1:107480611:+:strandcross","FAM69A--NTNG1","ENSG00000154511","ENSG00000162631",5.0,1.0,1.0,1.0,0.837,0.00262467191601]
["TCGA_BRCA","TCGA-EW-A3U0-01A","3:AC078785.1:113019706:+:3:ULK4:41566130:-:strandcross","AC078785.1--ULK4","ENSG00000240057","ENSG00000168038",3.0,1.0,1.0,1.0,0.827,0.00158227848101]
["TCGA_BRCA","TCGA-EW-A3U0-01A","19:MED25:49819296:+:19:AP2A1:49781757:+:rev","MED25--AP2A1","ENSG00000104973","ENSG00000196961",12.0,1.0,1.0,1.0,0.874,"NA"]
["TCGA_BRCA","TCGA-EW-A6S9-01A","9:KDM4C:6893232:+:6:ARMC2:108899694:+:fusion","KDM4C--ARMC2","ENSG00000107077","ENSG00000118690",7.0,1.0,1.0,1.0,0.616,0.00408163265306]
["TCGA_BRCA","TCGA-EW-A6SB-01A","8:TRPS1:115587001:-:8:SPAG1:100240403:+:strandcross","TRPS1--SPAG1","ENSG00000104447","ENSG00000104450",12.0,1.0,1.0,1.0,0.991,0.00259067357513]
["TCGA_BRCA","TCGA-EW-A6SD-01A","1:FAM69A:92961376:-:6:OFCC1:9908604:-:fusion","FAM69A--OFCC1","ENSG00000154511","ENSG00000181355",3.0,1.0,1.0,1.0,0.872,0.0018018018018]
["TCGA_BRCA","TCGA-GI-A2C8-01A","8:RRM2B:102218814:-:8:ZFPM2:105419144:+:strandcross","RRM2B--ZFPM2","ENSG00000048392","ENSG00000169946",4.0,1.0,1.0,1.0,0.768,0.00857142857143]
["TCGA_BRCA","TCGA-GI-A2C9-01A","10:CACNB2:18150975:+:10:ST8SIA6-AS1:17399105:+:rev","CACNB2--ST8SIA6-AS1","ENSG00000165995","ENSG00000204832",1.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-GM-A2DD-01A","14:MARK3:103475210:+:14:SLC25A21:36875004:-:strandcross","MARK3--SLC25A21","ENSG00000075413","ENSG00000183032",3.0,1.0,1.0,1.0,0.938,0.00213219616205]
["TCGA_BRCA","TCGA-GM-A2DD-01A","3:TBC1D5:17742481:-:3:TOP2B:25601225:-:rev","TBC1D5--TOP2B","ENSG00000131374","ENSG00000077097",5.0,1.0,1.0,1.0,0.782,0.0]
["TCGA_BRCA","TCGA-GM-A2DH-01A","3:BBX:107526398:+:13:RB1:48360017:+:fusion","BBX--RB1","ENSG00000114439","ENSG00000139687",16.0,1.0,1.0,1.0,0.831831194475352,0.00330578512397]
["TCGA_BRCA","TCGA-GM-A2DL-01A","17:GGA3:75239789:-:12:ATF7:53508027:-:fusion","GGA3--ATF7","ENSG00000125447","ENSG00000170653",12.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_BRCA","TCGA-HN-A2NL-01A","12:GPR19:12684351:-:6:LY86-AS1:6475758:-:fusion","GPR19--LY86-AS1","ENSG00000183150","ENSG00000216863",2.0,1.0,1.0,1.0,0.793,0.00588235294118]
["TCGA_BRCA","TCGA-JL-A3YW-01A","15:DAPK2:64040170:-:15:FAM96A:64081151:-:rev","DAPK2--FAM96A","ENSG00000035664","ENSG00000166797",2.0,2.0,1.0,1.0,0.995,"NA"]
["TCGA_BRCA","TCGA-LD-A7W5-01A","10:AC010997.2:75431522:-:10:ANK3:60208233:-:reg","AC010997.2--ANK3","ENSG00000236842","ENSG00000151150",2.0,1.0,1.0,1.0,0.871,0.00411522633745]
["TCGA_BRCA","TCGA-LD-A7W5-01A","5:TRIO:14336727:+:10:FAM53B:124623604:-:fusion","TRIO--FAM53B","ENSG00000038382","ENSG00000189319",7.0,1.0,1.0,1.0,0.548,0.00411522633745]
["TCGA_BRCA","TCGA-LD-A9QF-01A","1:SNHG12:28581590:-:1:YIPF1:53860153:-:rev","SNHG12--YIPF1","ENSG00000197989","ENSG00000058799",67.0,1.0,1.0,1.0,0.681409867690737,0.0108695652174]
["TCGA_BRCA","TCGA-LL-A5YN-01A","17:MED1:39447798:-:19:ODF3L2:464364:-:fusion","MED1--ODF3L2","ENSG00000125686","ENSG00000181781",29.0,1.0,1.0,1.0,0.842608271946805,0.00161030595813]
["TCGA_BRCA","TCGA-LL-A6FQ-01A","1:THRAP3:36224505:+:1:MAP7D1:36170971:+:rev","THRAP3--MAP7D1","ENSG00000054118","ENSG00000116871",4.0,2.0,2.0,1.0,0.685,"NA"]
["TCGA_BRCA","TCGA-LL-A7SZ-01A","2:BIRC6:32597968:+:2:RMDN2:38066982:+:reg","BIRC6--RMDN2","ENSG00000115760","ENSG00000115841",40.0,1.0,1.0,1.0,0.94842022327849,0.00249376558603]
["TCGA_BRCA","TCGA-LL-A9Q3-01A","9:TBC1D13:128797214:+:9:ODF2:128483938:+:rev","TBC1D13--ODF2","ENSG00000107021","ENSG00000136811",1.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_BRCA","TCGA-OL-A5D7-01A","4:FRYL:48619274:-:20:DTD1:18744100:+:fusion","FRYL--DTD1","ENSG00000075539","ENSG00000125821",14.0,1.0,1.0,1.0,0.162,0.0237623762376]
["TCGA_BRCA","TCGA-OL-A5RU-01A","11:CHKA:68061953:-:11:KMT5B:68159171:-:rev","CHKA--KMT5B","ENSG00000110721","ENSG00000110066",2.0,1.0,1.0,1.0,0.876,"NA"]
["TCGA_BRCA","TCGA-OL-A5RW-01A","16:CRAMP1:1614985:+:16:AL133297.2:1609971:+:rev","CRAMP1--AL133297.2","ENSG00000007545","ENSG00000260989",3.0,1.0,1.0,1.0,0.678,"NA"]
["TCGA_BRCA","TCGA-OL-A5RZ-01A","17:TAOK1:29391024:+:17:CDK12:39544249:+:reg","TAOK1--CDK12","ENSG00000160551","ENSG00000167258",2.0,1.0,1.0,1.0,0.153,0.0229508196721]
["TCGA_BRCA","TCGA-OL-A66I-01A","19:TMEM259:1020772:-:8:CCDC25:27752587:-:fusion","TMEM259--CCDC25","ENSG00000182087","ENSG00000147419",4.0,1.0,1.0,1.0,0.534,0.00263504611331]
["TCGA_BRCA","TCGA-OL-A66P-01A","11:FAM111B:59109706:+:11:GLYATL1:58947858:+:rev","FAM111B--GLYATL1","ENSG00000189057","ENSG00000166840",3.0,1.0,1.0,1.0,0.866,"NA"]
["TCGA_BRCA","TCGA-OL-A6VO-01A","6:CD2AP:47554766:+:6:BLOC1S5:8015828:-:strandcross","CD2AP--BLOC1S5","ENSG00000198087","ENSG00000188428",20.0,1.0,1.0,1.0,0.653722324762436,0.00255754475703]
["TCGA_BRCA","TCGA-PE-A5DE-01A","22:SNAP29:20870533:+:22:IGLL1:23575082:-:strandcross","SNAP29--IGLL1","ENSG00000099940","ENSG00000128322",107.0,1.0,1.0,1.0,0.990858977755168,0.0]
["TCGA_BRCA","TCGA-S3-A6ZF-01A","10:BLNK:96209838:-:10:PIK3AP1:96628493:-:rev","BLNK--PIK3AP1","ENSG00000095585","ENSG00000155629",3.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_BRCA","TCGA-S3-AA0Z-01A","16:PARN:14552021:-:16:SMG1:18838466:-:rev","PARN--SMG1","ENSG00000140694","ENSG00000157106",3.0,1.0,1.0,1.0,0.97,0.00298507462687]
["TCGA_BRCA","TCGA-S3-AA17-01A","18:DYM:49331864:-:8:AC022639.1:64133514:-:fusion","DYM--AC022639.1","ENSG00000141627","ENSG00000253554",2.0,1.0,1.0,1.0,0.884,0.00549450549451]
["TCGA_BRCA","TCGA-UL-AAZ6-01A","16:GLG1:74474546:-:16:TMEM170A:75451839:-:rev","GLG1--TMEM170A","ENSG00000090863","ENSG00000261717",1.0,1.0,1.0,1.0,0.891,"NA"]
["TCGA_BRCA","TCGA-XX-A899-01A","11:PAK1:77473552:-:11:CWF19L2:107455776:-:rev","PAK1--CWF19L2","ENSG00000149269","ENSG00000152404",17.0,1.0,1.0,1.0,0.526383907815554,0.0131578947368]
["TCGA_BRCA","TCGA-Z7-A8R6-01A","11:PGM2L1:74398051:-:11:PPME1:74250954:+:strandcross","PGM2L1--PPME1","ENSG00000165434","ENSG00000214517",29.0,1.0,1.0,1.0,0.720725711861493,0.00869565217391]
["TCGA_CESC","TCGA-C5-A1BL-01A","17:SMG6:2303633:-:3:AC128685.1:163207975:+:fusion","SMG6--AC128685.1","ENSG00000070366","ENSG00000241168",5.0,1.0,1.0,1.0,0.364,0.00479233226837]
["TCGA_CESC","TCGA-C5-A1MK-01A","1:GON4L:155813634:-:18:SERPINB7:63782355:+:fusion","GON4L--SERPINB7","ENSG00000116580","ENSG00000166396",4.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_CESC","TCGA-C5-A2LX-01A","1:DCST1:155045992:+:17:ASPSCR1:82010802:+:fusion","DCST1--ASPSCR1","ENSG00000163357","ENSG00000169696",4.0,1.0,1.0,1.0,0.441,0.00284090909091]
["TCGA_CESC","TCGA-C5-A3HE-01A","15:RNF111:59031702:+:15:SLTM:58916999:-:strandcross","RNF111--SLTM","ENSG00000157450","ENSG00000137776",5.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_CESC","TCGA-C5-A7CO-01A","20:CHD6:41512846:-:20:CTNNBL1:37859899:+:strandcross","CHD6--CTNNBL1","ENSG00000124177","ENSG00000132792",8.0,1.0,1.0,1.0,0.75,0.00573065902579]
["TCGA_CESC","TCGA-C5-A7X3-01A","22:KREMEN1:29142100:+:22:HSCB:28751241:+:rev","KREMEN1--HSCB","ENSG00000183762","ENSG00000100209",5.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_CESC","TCGA-C5-A8XH-01A","10:AC245041.3:47991680:-:X:SHROOM2:9890977:+:fusion","AC245041.3--SHROOM2","ENSG00000276850","ENSG00000146950",7.0,1.0,1.0,1.0,0.589,0.00641025641026]
["TCGA_CESC","TCGA-C5-A902-01A","7:MEPCE:100429040:+:7:PILRA:100397879:+:rev","MEPCE--PILRA","ENSG00000146834","ENSG00000085514",2.0,1.0,1.0,1.0,0.65,"NA"]
["TCGA_CESC","TCGA-DS-A0VL-01A","15:VPS39:42178218:-:15:TMEM87A:42244167:-:rev","VPS39--TMEM87A","ENSG00000166887","ENSG00000103978",2.0,1.0,1.0,1.0,0.957,"NA"]
["TCGA_CESC","TCGA-DS-A1O9-01A","11:SIPA1:65645129:+:11:FRMD8:65411242:+:rev","SIPA1--FRMD8","ENSG00000213445","ENSG00000126391",9.0,1.0,1.0,1.0,0.948,"NA"]
["TCGA_CESC","TCGA-DS-A3LQ-01A","22:MYH9:36341370:-:22:TXN2:36467917:-:rev","MYH9--TXN2","ENSG00000100345","ENSG00000100348",3.0,1.0,1.0,1.0,0.874,"NA"]
["TCGA_CESC","TCGA-DS-A7WH-01A","2:SH3BP4:234995376:+:3:MST1R:49899263:-:fusion","SH3BP4--MST1R","ENSG00000130147","ENSG00000164078",26.0,1.0,1.0,1.0,0.774852268659554,0.00793650793651]
["TCGA_CESC","TCGA-EA-A44S-01A","11:EXT2:44171742:+:11:TTC17:43414590:+:rev","EXT2--TTC17","ENSG00000151348","ENSG00000052841",3.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_CESC","TCGA-EA-A5ZF-01A","19:CAPNS1:36146312:+:19:UPK1A-AS1:35668685:-:strandcross","CAPNS1--UPK1A-AS1","ENSG00000126247","ENSG00000226510",67.0,1.0,1.0,1.0,0.942752711206612,0.00238095238095]
["TCGA_CESC","TCGA-EK-A2PG-01A","19:TBC1D17:49884758:+:19:AP2A1:49800961:+:rev","TBC1D17--AP2A1","ENSG00000104946","ENSG00000196961",2.0,1.0,1.0,1.0,0.891,"NA"]
["TCGA_CESC","TCGA-EK-A2RL-01A","12:ETV6:11650160:+:12:AC007529.2:16661766:+:reg","ETV6--AC007529.2","ENSG00000139083","ENSG00000283240",4.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_CESC","TCGA-FU-A23L-01A","4:SDAD1:75981372:-:4:CXCL9:76006274:-:rev","SDAD1--CXCL9","ENSG00000198301","ENSG00000138755",2.0,1.0,1.0,1.0,0.856,"NA"]
["TCGA_CESC","TCGA-FU-A5XV-01A","17:NPLOC4:81629725:-:17:OXLD1:81665584:-:rev","NPLOC4--OXLD1","ENSG00000182446","ENSG00000204237",2.0,1.0,1.0,1.0,0.954,"NA"]
["TCGA_CESC","TCGA-FU-A5XV-01A","9:GDA:72149682:+:9:C9orf85:71971505:+:rev","GDA--C9orf85","ENSG00000119125","ENSG00000155621",2.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_CESC","TCGA-HM-A6W2-06A","19:AC011498.1:4488876:+:19:CHAF1A:4442245:+:rev","AC011498.1--CHAF1A","ENSG00000167674","ENSG00000167670",26.0,2.0,1.0,1.0,0.889743154724323,"NA"]
["TCGA_CESC","TCGA-IR-A3LH-01A","19:FSTL3:677977:+:6:STXBP5-AS1:147119477:-:fusion","FSTL3--STXBP5-AS1","ENSG00000070404","ENSG00000233452",2.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_CESC","TCGA-LP-A5U2-01A","3:KPNA1:122514757:-:4:CHRNA9:40348882:+:fusion","KPNA1--CHRNA9","ENSG00000114030","ENSG00000174343",13.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_CESC","TCGA-LP-A5U3-01A","20:NCOA3:47628023:+:5:ARHGAP26:143222358:+:fusion","NCOA3--ARHGAP26","ENSG00000124151","ENSG00000145819",28.0,1.0,1.0,1.0,0.824264550747171,0.00175438596491]
["TCGA_CESC","TCGA-MU-A51Y-01A","11:CTNND1:57762046:+:11:SLC22A10:63166865:+:reg","CTNND1--SLC22A10","ENSG00000198561","ENSG00000184999",11.0,1.0,1.0,1.0,0.502,0.0092936802974]
["TCGA_CESC","TCGA-Q1-A6DT-01A","6:SLC16A10:111177665:+:1:NME7:169132817:-:fusion","SLC16A10--NME7","ENSG00000112394","ENSG00000143156",51.0,1.0,1.0,1.0,0.962301151134491,0.0]
["TCGA_CESC","TCGA-Q1-A73R-01A","17:ERBB2:39723660:+:17:PPP1R1B:39635607:+:rev","ERBB2--PPP1R1B","ENSG00000141736","ENSG00000131771",1.0,1.0,1.0,1.0,0.946,"NA"]
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["TCGA_CESC","TCGA-VS-A959-01A","1:SPEN:15876678:+:1:PLEKHM2:15716237:+:rev","SPEN--PLEKHM2","ENSG00000065526","ENSG00000116786",3.0,1.0,1.0,1.0,0.799,"NA"]
["TCGA_CESC","TCGA-VS-A9UP-01A","17:WIPF2:40219492:+:17:DBF4B:44722880:+:reg","WIPF2--DBF4B","ENSG00000171475","ENSG00000161692",4.0,1.0,1.0,1.0,0.778,0.00581395348837]
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["TCGA_CHOL","TCGA-W5-AA2T-01A","1:MINDY1:151001250:-:1:MRPL9:151760899:-:rev","MINDY1--MRPL9","ENSG00000143409","ENSG00000143436",1.0,1.0,1.0,1.0,0.888,"NA"]
["TCGA_CHOL","TCGA-W5-AA2X-01A","12:SRGAP1:63844883:+:12:OS9:57715760:+:rev","SRGAP1--OS9","ENSG00000196935","ENSG00000135506",2.0,1.0,1.0,1.0,0.658,0.0145631067961]
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["TCGA_COAD","TCGA-5M-AAT4-01A","X:FAM122B:134797121:-:16:AC092143.4:89910591:+:fusion","FAM122B--AC092143.4","ENSG00000156504","ENSG00000141002",2.0,2.0,1.0,1.0,0.576,0.00881057268722]
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["TCGA_COAD","TCGA-A6-5656-01A","7:SEPT7:35873775:+:7:ICA1:8158652:-:strandcross","SEPT7--ICA1","ENSG00000122545","ENSG00000003147",4.0,2.0,1.0,1.0,0.971,0.0]
["TCGA_COAD","TCGA-A6-5660-01A","1:TUFT1:151566228:+:7:KMT2E:105108942:+:fusion","TUFT1--KMT2E","ENSG00000143367","ENSG00000005483",3.0,1.0,1.0,1.0,0.904,0.0]
["TCGA_COAD","TCGA-A6-5667-01A","7:BAIAP2L1:98400802:-:7:DMTF1:87170995:+:strandcross","BAIAP2L1--DMTF1","ENSG00000006453","ENSG00000135164",15.0,1.0,1.0,1.0,0.39,0.0201612903226]
["TCGA_COAD","TCGA-A6-6782-01A","6:FLOT1:30740158:-:6:LINC00243:30798772:-:rev","FLOT1--LINC00243","ENSG00000137312","ENSG00000214894",42.0,3.0,1.0,1.0,0.952198475295471,"NA"]
["TCGA_COAD","TCGA-AA-A01Z-01A","17:MSI2:57262192:+:17:HOXB-AS4:48634551:+:rev","MSI2--HOXB-AS4","ENSG00000153944","ENSG00000242207",15.0,1.0,1.0,1.0,0.942,0.00334448160535]
["TCGA_COAD","TCGA-AM-5820-01A","7:CHCHD3:132975169:-:15:ITPKA:41502402:+:fusion","CHCHD3--ITPKA","ENSG00000106554","ENSG00000137825",24.0,1.0,1.0,1.0,0.743860171779816,0.00485436893204]
["TCGA_COAD","TCGA-AZ-4614-01A","1:CEP85:26239838:+:1:STX12:27789562:+:reg","CEP85--STX12","ENSG00000130695","ENSG00000117758",4.0,2.0,1.0,1.0,0.214,0.0151057401813]
["TCGA_COAD","TCGA-CA-5254-01A","10:MXI1:110208082:+:10:TMEM254:80081841:+:rev","MXI1--TMEM254","ENSG00000119950","ENSG00000133678",19.0,1.0,1.0,1.0,0.842676179324214,0.00492610837438]
["TCGA_COAD","TCGA-CM-4743-01A","16:LPCAT2:55509352:+:16:DNAJA2:46957220:-:strandcross","LPCAT2--DNAJA2","ENSG00000087253","ENSG00000069345",5.0,1.0,1.0,1.0,0.875,0.0]
["TCGA_COAD","TCGA-CM-6163-01A","17:SENP3-EIF4A1:7567004:+:17:ABR:1058867:-:strandcross","SENP3-EIF4A1--ABR","ENSG00000161956","ENSG00000159842",18.0,1.0,1.0,1.0,0.861402280783478,0.00649350649351]
["TCGA_COAD","TCGA-CM-6172-01A","8:SPIDR:47702015:+:8:ANK1:41758137:-:strandcross","SPIDR--ANK1","ENSG00000164808","ENSG00000029534",8.0,1.0,1.0,1.0,0.981,0.0]
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["TCGA_COAD","TCGA-D5-6926-01A","8:NSD3:38279540:-:8:ADAM18:39729898:+:strandcross","NSD3--ADAM18","ENSG00000147548","ENSG00000168619",126.0,1.0,1.0,1.0,0.894401139751752,0.00308641975309]
["TCGA_COAD","TCGA-DM-A1D7-01A","6:NFYA:41090309:+:6:TREML2:41194833:-:strandcross","NFYA--TREML2","ENSG00000001167","ENSG00000112195",3.0,1.0,1.0,1.0,0.582,0.00448430493274]
["TCGA_COAD","TCGA-DM-A28F-01A","13:MIPEP:23805950:-:13:POLR1D:27738707:+:strandcross","MIPEP--POLR1D","ENSG00000027001","ENSG00000186184",4.0,1.0,1.0,1.0,0.875,0.00431965442765]
["TCGA_COAD","TCGA-F4-6807-01A","10:TCF7L2:113040126:+:8:CHD7:60781000:+:fusion","TCF7L2--CHD7","ENSG00000148737","ENSG00000171316",6.0,1.0,1.0,1.0,0.975,0.0]
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["TCGA_DLBC","TCGA-GR-A4D4-01A","13:ING1:110714285:+:13:NAXD:110622216:+:rev","ING1--NAXD","ENSG00000153487","ENSG00000213995",21.0,3.0,3.0,1.0,0.644788954689066,"NA"]
["TCGA_DLBC","TCGA-GR-A4D9-01B","7:AC009403.1:155643468:-:6:TAP1:32849118:-:fusion","AC009403.1--TAP1","ENSG00000283128","ENSG00000168394",2.0,1.0,1.0,1.0,0.967,0.0]
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["TCGA_ESCA","TCGA-2H-A9GH-01A","16:NLRC5:57046641:+:16:FTO:54111762:+:rev","NLRC5--FTO","ENSG00000140853","ENSG00000140718",21.0,1.0,1.0,1.0,0.687923375397943,9.19963201472E-4]
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["TCGA_ESCA","TCGA-2H-A9GN-01A","2:MAIP1:199956248:+:2:C2orf69:199925062:+:rev","MAIP1--C2orf69","ENSG00000162972","ENSG00000178074",3.0,1.0,1.0,1.0,0.591,"NA"]
["TCGA_ESCA","TCGA-2H-A9GQ-01A","1:SDHC:161314425:+:1:MPZ:161307424:-:strandcross","SDHC--MPZ","ENSG00000143252","ENSG00000158887",9.0,1.0,1.0,1.0,0.698,0.00796812749004]
["TCGA_ESCA","TCGA-IC-A6RF-01A","19:ZNF808:52547638:+:3:PIGX:196726655:+:fusion","ZNF808--PIGX","ENSG00000198482","ENSG00000163964",2.0,1.0,1.0,1.0,0.541,0.0010298661174]
["TCGA_ESCA","TCGA-IG-A3I8-01A","11:YAP1:102114394:+:11:CDON:126023537:-:strandcross","YAP1--CDON","ENSG00000137693","ENSG00000064309",8.0,1.0,1.0,1.0,0.323,9.85221674877E-4]
["TCGA_ESCA","TCGA-IG-A3YC-01A","X:BCOR:40097215:-:X:AC078960.1:8018056:+:strandcross","BCOR--AC078960.1","ENSG00000183337","ENSG00000230394",4.0,1.0,1.0,1.0,0.731,0.0]
["TCGA_ESCA","TCGA-IG-A51D-01A","12:WSB2:118034986:-:12:RFC5:118019072:+:strandcross","WSB2--RFC5","ENSG00000176871","ENSG00000111445",4.0,2.0,2.0,2.0,0.91,0.0]
["TCGA_ESCA","TCGA-IG-A7DP-01A","3:IP6K1:49747818:-:3:DAG1:49510419:+:strandcross","IP6K1--DAG1","ENSG00000176095","ENSG00000173402",3.0,1.0,1.0,1.0,0.638,0.00655737704918]
["TCGA_ESCA","TCGA-IG-A8O2-01A","2:BCL11A:60545971:-:10:HACD1:17599411:-:fusion","BCL11A--HACD1","ENSG00000119866","ENSG00000165996",3.0,1.0,1.0,1.0,0.61,0.00262812089356]
["TCGA_ESCA","TCGA-IG-A97I-01A","6:BTN3A2:26370603:+:1:MACF1:39454909:+:fusion","BTN3A2--MACF1","ENSG00000186470","ENSG00000127603",3.0,1.0,1.0,1.0,0.95,0.0]
["TCGA_ESCA","TCGA-JY-A6FA-01A","2:PPIG:169584490:+:2:NFE2L2:177234271:-:strandcross","PPIG--NFE2L2","ENSG00000138398","ENSG00000116044",2.0,1.0,1.0,1.0,0.417,0.00334821428571]
["TCGA_ESCA","TCGA-JY-A6FD-01A","19:NUP62:49927694:-:19:DYRK1B:39831968:-:reg","NUP62--DYRK1B","ENSG00000104951","ENSG00000105204",13.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_ESCA","TCGA-JY-A6FE-01A","2:RPL31:101006071:+:2:NPAS2:100977710:+:rev","RPL31--NPAS2","ENSG00000071082","ENSG00000170485",2.0,1.0,2.0,1.0,0.939,"NA"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","1:PUM1:31059204:-:1:YARS:32811057:-:rev","PUM1--YARS","ENSG00000134644","ENSG00000134684",255.0,1.0,1.0,1.0,0.934728749301578,0.0]
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["TCGA_ESCA","TCGA-JY-A939-01A","1:ZZZ3:77683262:-:1:RAVER2:64768656:+:strandcross","ZZZ3--RAVER2","ENSG00000036549","ENSG00000162437",2.0,1.0,1.0,1.0,0.98,0.00646725949879]
["TCGA_ESCA","TCGA-JY-A93F-01A","16:CTCF:67571264:+:16:KIAA0895L:67180666:-:strandcross","CTCF--KIAA0895L","ENSG00000102974","ENSG00000196123",6.0,1.0,1.0,1.0,0.975,0.0]
["TCGA_ESCA","TCGA-L5-A43I-01A","13:ZMYM2:19960026:+:13:LATS2:21046230:-:strandcross","ZMYM2--LATS2","ENSG00000121741","ENSG00000150457",10.0,1.0,1.0,1.0,0.673,0.0]
["TCGA_ESCA","TCGA-L5-A43M-01A","12:AC134511.1:67069050:-:12:WIF1:65056126:-:reg","AC134511.1--WIF1","ENSG00000256248","ENSG00000156076",14.0,1.0,1.0,1.0,0.947,0.0]
["TCGA_ESCA","TCGA-L5-A43M-01A","14:FUT8:65413214:+:14:FNTB:65004249:+:rev","FUT8--FNTB","ENSG00000033170","ENSG00000125954",4.0,1.0,1.0,1.0,0.953,"NA"]
["TCGA_ESCA","TCGA-L5-A4OG-01A","19:ONECUT3:1754854:+:3:SKIL:170359699:+:fusion","ONECUT3--SKIL","ENSG00000205922","ENSG00000136603",3.0,1.0,1.0,1.0,0.957,0.0]
["TCGA_ESCA","TCGA-L5-A4ON-01A","5:ANKHD1-EIF4EBP3:140402273:+:5:UBE2D2:139600372:+:rev","ANKHD1-EIF4EBP3--UBE2D2","ENSG00000131503","ENSG00000131508",2.0,3.0,3.0,2.0,0.589,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","22:PI4KA:20810967:-:22:AC002472.1:21042703:+:strandcross","PI4KA--AC002472.1","ENSG00000241973","ENSG00000226872",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","14:TTLL5:75793100:+:14:JDP2:75461426:+:rev","TTLL5--JDP2","ENSG00000119685","ENSG00000140044",8.0,1.0,1.0,1.0,0.595,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","1:PRPF3:150340477:+:1:VPS45:150144709:+:rev","PRPF3--VPS45","ENSG00000117360","ENSG00000136631",2.0,1.0,1.0,1.0,0.96,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","3:AC022384.1:10249614:+:3:FANCD2:10101188:+:rev","AC022384.1--FANCD2","ENSG00000157014","ENSG00000144554",32.0,1.0,1.0,1.0,0.839790968503254,"NA"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","10:USP54:73520908:-:1:PIK3CD:9715541:+:fusion","USP54--PIK3CD","ENSG00000166348","ENSG00000171608",3.0,1.0,1.0,1.0,0.709,0.0]
["TCGA_ESCA","TCGA-L5-A4OS-01A","17:ANKFY1:4242256:-:14:CCDC88C:91291084:-:fusion","ANKFY1--CCDC88C","ENSG00000185722","ENSG00000015133",14.0,1.0,1.0,1.0,0.812,0.0]
["TCGA_ESCA","TCGA-L5-A4OS-01A","11:DDB2:47217049:+:11:ATG13:46659392:+:rev","DDB2--ATG13","ENSG00000134574","ENSG00000175224",2.0,1.0,1.0,1.0,0.756,"NA"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","7:NOM1:156954298:+:7:RNF32:156675696:+:rev","NOM1--RNF32","ENSG00000146909","ENSG00000105982",60.0,1.0,1.0,1.0,0.947020229979474,"NA"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","17:CPD:30442450:+:17:CCDC57:82188419:-:strandcross","CPD--CCDC57","ENSG00000108582","ENSG00000176155",8.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_ESCA","TCGA-L5-A4OW-01A","17:TBCD:82814934:+:17:CCDC57:82101866:-:strandcross","TBCD--CCDC57","ENSG00000141556","ENSG00000176155",81.0,1.0,1.0,1.0,0.828319543089308,8.67302688638E-4]
["TCGA_ESCA","TCGA-L5-A88S-01A","3:PHC3:170113360:-:3:NCEH1:172648114:-:rev","PHC3--NCEH1","ENSG00000173889","ENSG00000144959",14.0,1.0,1.0,1.0,0.957,0.0]
["TCGA_ESCA","TCGA-L5-A88V-01A","17:MED1:39434249:-:17:CDK12:39470879:+:strandcross","MED1--CDK12","ENSG00000125686","ENSG00000167258",3.0,1.0,1.0,1.0,0.598,0.00749063670412]
["TCGA_ESCA","TCGA-L5-A88W-01A","15:EMC4:34227846:+:14:MTHFD1:64458214:+:fusion","EMC4--MTHFD1","ENSG00000128463","ENSG00000100714",2.0,1.0,1.0,1.0,0.969,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","19:BORCS8:19180686:-:19:BCL3:44758246:+:strandcross","BORCS8--BCL3","ENSG00000064489","ENSG00000069399",2.0,1.0,1.0,1.0,0.661,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","19:BORCS8:19182573:-:19:BCL3:44758724:+:strandcross","BORCS8--BCL3","ENSG00000064489","ENSG00000069399",2.0,1.0,1.0,1.0,0.386,0.00118343195266]
["TCGA_ESCA","TCGA-L5-A891-01A","19:MKNK2:2050801:-:19:AC010328.1:53009347:+:strandcross","MKNK2--AC010328.1","ENSG00000099875","ENSG00000267943",17.0,1.0,1.0,1.0,0.834543528227793,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","3:IP6K1:49786354:-:22:FOXRED2:36506423:-:fusion","IP6K1--FOXRED2","ENSG00000176095","ENSG00000100350",13.0,1.0,1.0,1.0,0.452,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","16:SMG1:18925950:-:16:AC099518.4:19064039:-:rev","SMG1--AC099518.4","ENSG00000157106","ENSG00000261465",19.0,2.0,1.0,1.0,0.836419854993957,"NA"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","12:FRS2:69470530:+:12:LINC01481:70242893:-:strandcross","FRS2--LINC01481","ENSG00000166225","ENSG00000257815",7.0,1.0,1.0,1.0,0.972,0.0]
["TCGA_ESCA","TCGA-L5-A8NE-01A","1:MIR34AHG:9182007:-:12:LYZ:69350108:+:fusion","MIR34AHG--LYZ","ENSG00000228526","ENSG00000090382",2.0,1.0,1.0,1.0,0.916,0.0]
["TCGA_ESCA","TCGA-L5-A8NE-01A","2:DTNB:25596086:-:2:ASXL2:25768868:-:rev","DTNB--ASXL2","ENSG00000138101","ENSG00000143970",9.0,1.0,1.0,1.0,0.59,"NA"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","11:ARRB1:75351588:-:11:FCHSD2:73015885:-:reg","ARRB1--FCHSD2","ENSG00000137486","ENSG00000137478",4.0,1.0,1.0,1.0,0.505,0.0]
["TCGA_ESCA","TCGA-L5-A8NG-01A","17:UTP18:51268904:+:17:AC090283.1:40809149:+:rev","UTP18--AC090283.1","ENSG00000011260","ENSG00000264488",12.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_ESCA","TCGA-L5-A8NH-01A","7:KIAA1324L:86891724:-:8:KHDRBS3:135606955:+:fusion","KIAA1324L--KHDRBS3","ENSG00000164659","ENSG00000131773",2.0,1.0,1.0,1.0,0.893,0.0]
["TCGA_ESCA","TCGA-L5-A8NI-01A","1:THRAP3:36224505:+:1:ARHGEF10L:17580553:+:rev","THRAP3--ARHGEF10L","ENSG00000054118","ENSG00000074964",7.0,1.0,1.0,1.0,0.299,0.00310237849018]
["TCGA_ESCA","TCGA-L5-A8NI-01A","11:PGM2L1:74398051:-:11:CHRDL2:74718832:-:rev","PGM2L1--CHRDL2","ENSG00000165434","ENSG00000054938",2.0,2.0,2.0,2.0,0.996,"NA"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","19:TMEM160:47046593:-:19:ZC3H4:47082295:-:rev","TMEM160--ZC3H4","ENSG00000130748","ENSG00000130749",5.0,1.0,1.0,1.0,0.92,"NA"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","4:RBM47:40630463:-:4:APBB2:40830577:-:rev","RBM47--APBB2","ENSG00000163694","ENSG00000163697",8.0,1.0,1.0,1.0,0.954,"NA"]
["TCGA_ESCA","TCGA-L5-A8NJ-01A","17:PGAP3:39684597:-:17:ERBB2:39693261:+:strandcross","PGAP3--ERBB2","ENSG00000161395","ENSG00000141736",13.0,1.0,1.0,1.0,0.762,0.00390625]
["TCGA_ESCA","TCGA-L5-A8NR-01A","4:ZNF718:124673:+:4:GAK:904779:-:strandcross","ZNF718--GAK","ENSG00000250312","ENSG00000178950",10.0,1.0,1.0,1.0,0.337,0.00252737994945]
["TCGA_ESCA","TCGA-L5-A8NT-01A","9:DAB2IP:121567228:+:9:DOCK8:286461:+:rev","DAB2IP--DOCK8","ENSG00000136848","ENSG00000107099",3.0,1.0,1.0,1.0,0.362,0.00468384074941]
["TCGA_ESCA","TCGA-L7-A56G-01A","4:RUFY3:70789592:+:4:HNRNPDL:82424883:-:strandcross","RUFY3--HNRNPDL","ENSG00000018189","ENSG00000152795",3.0,1.0,1.0,1.0,0.275,0.00293255131965]
["TCGA_ESCA","TCGA-LN-A49L-01A","16:C16orf70:67110239:+:16:DNAAF1:84159675:+:reg","C16orf70--DNAAF1","ENSG00000125149","ENSG00000154099",31.0,1.0,1.0,1.0,0.863570307637967,0.0]
["TCGA_ESCA","TCGA-LN-A49O-01A","12:TUBA1C:49269976:+:17:IGFBP4:40452985:+:fusion","TUBA1C--IGFBP4","ENSG00000167553","ENSG00000141753",102.0,1.0,1.0,1.0,0.325778891427872,7.09723207949E-4]
["TCGA_ESCA","TCGA-LN-A49V-01A","11:MRPL48:73808350:+:11:PLEKHB1:73650553:+:rev","MRPL48--PLEKHB1","ENSG00000175581","ENSG00000021300",3.0,1.0,1.0,1.0,0.505,"NA"]
["TCGA_ESCA","TCGA-LN-A49X-01A","22:GRAMD4:46637960:+:19:TNFAIP8L1:4651867:+:fusion","GRAMD4--TNFAIP8L1","ENSG00000075240","ENSG00000185361",8.0,1.0,1.0,1.0,0.846,0.00731707317073]
["TCGA_ESCA","TCGA-LN-A4A2-01A","1:MIR205HG:209429408:+:12:ATF7IP:14423909:+:fusion","MIR205HG--ATF7IP","ENSG00000230937","ENSG00000171681",3.0,2.0,1.0,1.0,0.974,0.0]
["TCGA_ESCA","TCGA-LN-A4A4-01A","3:AC022384.1:10249614:+:3:AC092422.1:24858674:+:reg","AC022384.1--AC092422.1","ENSG00000157014","ENSG00000237838",106.0,1.0,1.0,1.0,0.904076686848821,0.0]
["TCGA_ESCA","TCGA-LN-A4MQ-01A","13:KLF5:73063883:+:13:PIBF1:73015869:+:rev","KLF5--PIBF1","ENSG00000102554","ENSG00000083535",233.0,1.0,1.0,1.0,0.987129038042767,"NA"]
["TCGA_ESCA","TCGA-LN-A5U6-01A","5:PDZD2:31936346:+:10:PARD3:34696419:-:fusion","PDZD2--PARD3","ENSG00000133401","ENSG00000148498",8.0,1.0,1.0,1.0,0.785,8.38926174497E-4]
["TCGA_ESCA","TCGA-LN-A7HV-01A","1:IPO9:201858553:+:1:NAV1:201788468:+:rev","IPO9--NAV1","ENSG00000198700","ENSG00000134369",2.0,1.0,1.0,1.0,0.759,"NA"]
["TCGA_ESCA","TCGA-LN-A8HZ-01A","16:WWP2:69799295:+:16:GSG1L:27845061:-:strandcross","WWP2--GSG1L","ENSG00000198373","ENSG00000169181",21.0,1.0,1.0,1.0,0.831277689687102,0.0021164021164]
["TCGA_ESCA","TCGA-LN-A8I1-01A","3:TBL1XR1:177197121:-:3:DCUN1D1:182964049:-:rev","TBL1XR1--DCUN1D1","ENSG00000177565","ENSG00000043093",3.0,1.0,1.0,1.0,0.479,0.0020202020202]
["TCGA_ESCA","TCGA-M9-A5M8-01A","17:ERBB2:39695181:+:17:KRT10:40821117:-:strandcross","ERBB2--KRT10","ENSG00000141736","ENSG00000186395",9.0,1.0,1.0,1.0,0.866,0.0]
["TCGA_ESCA","TCGA-Q9-A6FW-01A","2:NFE2L2:177264532:-:12:CMAS:22055149:+:fusion","NFE2L2--CMAS","ENSG00000116044","ENSG00000111726",2.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_ESCA","TCGA-R6-A6KZ-01A","12:AC078778.2:54277175:+:2:USP37:218553724:-:fusion","AC078778.2--USP37","ENSG00000258344","ENSG00000135913",2.0,1.0,1.0,1.0,0.488,0.0014367816092]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","3:ARHGEF3:57035088:-:16:PRR14:30651596:+:fusion","ARHGEF3--PRR14","ENSG00000163947","ENSG00000156858",1.0,1.0,1.0,1.0,0.902,0.0]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","11:RHOD:67066847:+:11:AP001107.3:66318834:+:rev","RHOD--AP001107.3","ENSG00000173156","ENSG00000254458",11.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","9:NCS1:130223159:+:9:GPR107:130086420:+:rev","NCS1--GPR107","ENSG00000107130","ENSG00000148358",2.0,1.0,1.0,1.0,0.405,"NA"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","17:NBR1:43194499:+:17:CD300LB:74526077:-:strandcross","NBR1--CD300LB","ENSG00000188554","ENSG00000178789",3.0,1.0,1.0,1.0,0.436,5.63063063063E-4]
["TCGA_ESCA","TCGA-R6-A8W5-01B","17:ERBB2:39710481:+:17:AC087491.1:39619753:+:rev","ERBB2--AC087491.1","ENSG00000141736","ENSG00000214546",2.0,1.0,1.0,1.0,0.463,"NA"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","4:SLC39A8:102304317:-:4:MANBA:102639857:-:rev","SLC39A8--MANBA","ENSG00000138821","ENSG00000109323",2.0,1.0,1.0,1.0,0.911,"NA"]
["TCGA_ESCA","TCGA-S8-A6BV-01A","17:JMJD6:76718733:-:3:GLT8D1:52696040:-:fusion","JMJD6--GLT8D1","ENSG00000070495","ENSG00000016864",9.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_ESCA","TCGA-V5-A7RB-01A","2:WDSUB1:159282672:-:2:BAZ2B:159350357:-:rev","WDSUB1--BAZ2B","ENSG00000196151","ENSG00000123636",2.0,1.0,1.0,1.0,0.484,"NA"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","16:SEZ6L2:29876756:-:16:AC027130.1:19762016:-:reg","SEZ6L2--AC027130.1","ENSG00000174938","ENSG00000261195",5.0,1.0,1.0,1.0,0.826,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","17:MED13:62063067:-:17:MYO15B:75612798:+:strandcross","MED13--MYO15B","ENSG00000108510","ENSG00000266714",9.0,1.0,1.0,1.0,0.874,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","21:ITSN1:33642713:+:21:CLDN14:36526527:-:strandcross","ITSN1--CLDN14","ENSG00000205726","ENSG00000159261",2.0,1.0,1.0,1.0,0.468,0.0]
["TCGA_ESCA","TCGA-VR-A8EO-01A","9:HNRNPK:83980503:-:4:FIP1L1:53399730:+:fusion","HNRNPK--FIP1L1","ENSG00000165119","ENSG00000145216",2.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","9:NAA35:85978381:+:3:MECOM:169381524:-:fusion","NAA35--MECOM","ENSG00000135040","ENSG00000085276",2.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_ESCA","TCGA-VR-A8ER-01A","11:ORAOV1:69673216:-:2:LINC00276:13710721:-:fusion","ORAOV1--LINC00276","ENSG00000149716","ENSG00000230448",5.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_ESCA","TCGA-VR-A8EU-01A","7:OSBPL3:24979886:-:11:ANO1:70149710:+:fusion","OSBPL3--ANO1","ENSG00000070882","ENSG00000131620",8.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_ESCA","TCGA-VR-A8EW-01A","1:RC3H1:173951986:-:1:AL121983.2:174122192:-:rev","RC3H1--AL121983.2","ENSG00000135870","ENSG00000227373",12.0,1.0,1.0,1.0,0.855,"NA"]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","3:MRPL3:131487680:-:4:METAP1:99034230:+:fusion","MRPL3--METAP1","ENSG00000114686","ENSG00000164024",1.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_ESCA","TCGA-VR-AA4D-01A","17:ERBB2:39700311:+:17:KRT19:41525273:-:strandcross","ERBB2--KRT19","ENSG00000141736","ENSG00000171345",2.0,1.0,1.0,1.0,0.377,7.19424460432E-4]
["TCGA_ESCA","TCGA-VR-AA7B-01A","20:TSHZ2:52973333:+:20:SGK2:43569385:+:rev","TSHZ2--SGK2","ENSG00000182463","ENSG00000277611",3.0,1.0,1.0,1.0,0.869,0.00233644859813]
["TCGA_ESCA","TCGA-XP-A8T6-01A","19:ZNF420:37091121:+:19:DPF1:38213756:-:strandcross","ZNF420--DPF1","ENSG00000197050","ENSG00000011332",33.0,1.0,1.0,1.0,0.799151546297871,0.0]
["TCGA_ESCA","TCGA-Z6-AAPN-01A","7:RALA:39623825:+:7:EVX1:27245048:+:rev","RALA--EVX1","ENSG00000006451","ENSG00000106038",2.0,1.0,1.0,1.0,0.917,0.00101729399797]
["TCGA_GBM","TCGA-02-2485-01A","12:MARS:57504299:+:12:AC020637.1:58812414:+:reg","MARS--AC020637.1","ENSG00000166986","ENSG00000258231",305.0,1.0,1.0,1.0,0.912915254069261,0.0]
["TCGA_GBM","TCGA-06-0129-01A","12:MPHOSPH9:123194386:-:6:AL122034.1:36940363:-:fusion","MPHOSPH9--AL122034.1","ENSG00000051825","ENSG00000232598",113.0,1.0,1.0,1.0,0.778136803066447,8.21018062397E-4]
["TCGA_GBM","TCGA-06-0129-01A","12:WASHC4:105144872:+:12:LGR5:71535115:+:rev","WASHC4--LGR5","ENSG00000136051","ENSG00000139292",12.0,1.0,1.0,1.0,0.435,8.21018062397E-4]
["TCGA_GBM","TCGA-06-0129-01A","6:MDGA1:37655700:-:6:PTK7:43158817:+:strandcross","MDGA1--PTK7","ENSG00000112139","ENSG00000112655",18.0,1.0,1.0,1.0,0.722566036744635,8.21018062397E-4]
["TCGA_GBM","TCGA-06-0130-01A","7:GSAP:77376848:-:7:STYXL1:76005404:-:reg","GSAP--STYXL1","ENSG00000186088","ENSG00000127952",3.0,1.0,1.0,1.0,0.592,0.00116009280742]
["TCGA_GBM","TCGA-06-0138-01A","12:TSFM:57787162:+:12:GLI1:57464673:+:rev","TSFM--GLI1","ENSG00000123297","ENSG00000111087",2.0,1.0,1.0,1.0,0.853,"NA"]
["TCGA_GBM","TCGA-06-0157-01A","1:NFASC:204828782:+:1:SOX13:204112915:+:rev","NFASC--SOX13","ENSG00000163531","ENSG00000143842",26.0,1.0,1.0,1.0,0.801993096855526,"NA"]
["TCGA_GBM","TCGA-06-0174-01A","12:R3HDM2:57292572:-:12:PIP4K2C:57599065:+:strandcross","R3HDM2--PIP4K2C","ENSG00000179912","ENSG00000166908",29.0,1.0,1.0,1.0,0.376095968330311,0.00370828182942]
["TCGA_GBM","TCGA-06-0190-02A","1:PGD:10399704:+:1:CAMTA1:7249491:+:rev","PGD--CAMTA1","ENSG00000142657","ENSG00000171735",15.0,2.0,2.0,2.0,0.256,0.00295420974889]
["TCGA_GBM","TCGA-06-0211-01A","9:SHB:38016011:-:9:LINGO2:27950706:-:reg","SHB--LINGO2","ENSG00000255872","ENSG00000174482",4.0,3.0,3.0,3.0,0.985,0.0]
["TCGA_GBM","TCGA-06-0686-01A","12:MARCH9:57757084:+:6:CD2AP:47503280:+:fusion","MARCH9--CD2AP","ENSG00000139266","ENSG00000198087",4.0,1.0,1.0,1.0,0.571,0.00485436893204]
["TCGA_GBM","TCGA-06-0744-01A","7:EGFR:55019365:+:7:AC074351.1:54783108:+:rev","EGFR--AC074351.1","ENSG00000146648","ENSG00000234707",2.0,3.0,2.0,2.0,0.748,"NA"]
["TCGA_GBM","TCGA-06-0882-01A","16:TNRC6A:24730300:+:16:PRKCB:24180790:+:rev","TNRC6A--PRKCB","ENSG00000090905","ENSG00000166501",2.0,1.0,1.0,1.0,0.427,"NA"]
["TCGA_GBM","TCGA-06-2559-01A","4:HOPX:56681653:-:4:PDCL2:55582237:-:reg","HOPX--PDCL2","ENSG00000171476","ENSG00000163440",23.0,1.0,1.0,1.0,0.681716856653754,0.00290697674419]
["TCGA_GBM","TCGA-06-2565-01A","1:AGRN:1022462:+:1:PLCH2:2430338:+:reg","AGRN--PLCH2","ENSG00000188157","ENSG00000149527",8.0,1.0,1.0,1.0,0.337,0.00225733634312]
["TCGA_GBM","TCGA-06-2570-01A","12:R3HDM2:57395749:-:12:EEF1AKMT3:57780255:+:strandcross","R3HDM2--EEF1AKMT3","ENSG00000179912","ENSG00000123427",2.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_GBM","TCGA-06-5415-01A","16:VAT1L:77788915:+:1:AC105277.1:58896009:-:fusion","VAT1L--AC105277.1","ENSG00000171724","ENSG00000232453",2.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_GBM","TCGA-06-5856-01A","12:C12orf49:116737790:-:12:TMEM120B:121743629:+:strandcross","C12orf49--TMEM120B","ENSG00000111412","ENSG00000188735",2.0,1.0,1.0,1.0,0.782,0.00169635284139]
["TCGA_GBM","TCGA-06-5856-01A","16:ZNF598:2003616:-:16:AL032819.1:1411929:+:strandcross","ZNF598--AL032819.1","ENSG00000167962","ENSG00000260132",38.0,1.0,1.0,1.0,0.538319507406923,0.00169635284139]
["TCGA_GBM","TCGA-08-0386-01A","1:SRM:11058800:-:14:PPP4R3A:91490802:-:fusion","SRM--PPP4R3A","ENSG00000116649","ENSG00000100796",12.0,1.0,1.0,1.0,0.863,0.0]
["TCGA_GBM","TCGA-12-3650-01A","1:PLEKHM2:15719920:+:1:TMEM51:15210490:+:rev","PLEKHM2--TMEM51","ENSG00000116786","ENSG00000171729",3.0,1.0,1.0,1.0,0.459,"NA"]
["TCGA_GBM","TCGA-14-0790-01B","9:KIAA2026:5968019:-:9:RIC1:5656583:+:strandcross","KIAA2026--RIC1","ENSG00000183354","ENSG00000107036",3.0,1.0,1.0,1.0,0.348,0.0]
["TCGA_GBM","TCGA-14-1402-02A","19:FCGRT:49514486:+:19:BCAT2:48800297:-:strandcross","FCGRT--BCAT2","ENSG00000104870","ENSG00000105552",8.0,1.0,1.0,1.0,0.193,0.00666666666667]
["TCGA_GBM","TCGA-14-2554-01A","6:CEP85L:118632453:-:6:SYTL3:158745480:+:strandcross","CEP85L--SYTL3","ENSG00000111860","ENSG00000164674",23.0,1.0,1.0,1.0,0.724802872158961,0.00159489633174]
["TCGA_GBM","TCGA-19-0957-02A","7:EXOC4:133317390:+:19:RAB4B:40780019:+:fusion","EXOC4--RAB4B","ENSG00000131558","ENSG00000268975",5.0,1.0,1.0,1.0,0.385,0.0031746031746]
["TCGA_GBM","TCGA-19-2620-01A","6:IGF2R:159969395:+:7:CNTNAP2:148267033:+:fusion","IGF2R--CNTNAP2","ENSG00000197081","ENSG00000174469",4.0,1.0,1.0,1.0,0.752,0.0]
["TCGA_GBM","TCGA-19-2624-01A","7:LANCL2:55366229:+:12:CPM:68859071:-:fusion","LANCL2--CPM","ENSG00000132434","ENSG00000135678",2.0,1.0,1.0,1.0,0.774,0.0]
["TCGA_GBM","TCGA-26-5132-01A","12:CPM:68855981:-:12:PDZRN4:41552656:+:strandcross","CPM--PDZRN4","ENSG00000135678","ENSG00000165966",5.0,1.0,1.0,1.0,0.833,0.0]
["TCGA_GBM","TCGA-27-1830-01A","4:ANK2:113049812:+:4:ARHGAP10:148023263:+:reg","ANK2--ARHGAP10","ENSG00000145362","ENSG00000071205",4.0,1.0,1.0,1.0,0.747,0.0]
["TCGA_GBM","TCGA-27-1835-01A","14:PLEKHH1:67541993:+:6:TUBB:30722537:+:fusion","PLEKHH1--TUBB","ENSG00000054690","ENSG00000196230",9.0,1.0,1.0,1.0,0.426,0.0]
["TCGA_GBM","TCGA-27-2524-01A","21:EVA1C:32413013:+:2:CALM2:47170764:-:fusion","EVA1C--CALM2","ENSG00000166979","ENSG00000273269",3.0,1.0,1.0,1.0,0.204,0.00568181818182]
["TCGA_GBM","TCGA-28-1753-01A","9:MED27:132014337:-:11:AP000721.2:64103194:+:fusion","MED27--AP000721.2","ENSG00000160563","ENSG00000256824",6.0,1.0,1.0,1.0,0.352,0.00205338809035]
["TCGA_GBM","TCGA-28-5204-01A","8:ZFHX4-AS1:76502744:-:8:PMP2:81444989:-:rev","ZFHX4-AS1--PMP2","ENSG00000253661","ENSG00000147588",27.0,1.0,1.0,1.0,0.22107860499188,9.22509225092E-4]
["TCGA_GBM","TCGA-28-5220-01A","3:NLGN1:173605091:+:3:NDUFB5:179623920:+:reg","NLGN1--NDUFB5","ENSG00000169760","ENSG00000136521",3.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_GBM","TCGA-32-2615-01A","1:SCCPDH:246740301:+:2:HDLBP:241229961:-:fusion","SCCPDH--HDLBP","ENSG00000143653","ENSG00000115677",6.0,1.0,1.0,1.0,0.385,8.01282051282E-4]
["TCGA_GBM","TCGA-41-2571-01A","12:AC008035.1:46571412:+:12:DTX3:57608520:+:reg","AC008035.1--DTX3","ENSG00000272369","ENSG00000178498",187.0,1.0,1.0,1.0,0.912823645157175,0.0]
["TCGA_GBM","TCGA-41-2571-01A","12:CNOT2:70278274:+:12:DTX3:57609077:+:rev","CNOT2--DTX3","ENSG00000111596","ENSG00000178498",4.0,1.0,1.0,1.0,0.792,0.0]
["TCGA_GBM","TCGA-41-2571-01A","12:FRS2:69480359:+:12:DTX3:57609077:+:rev","FRS2--DTX3","ENSG00000166225","ENSG00000178498",56.0,1.0,1.0,1.0,0.671269205078414,0.00104931794334]
["TCGA_GBM","TCGA-41-4097-01A","3:SLC25A26:66263379:+:2:IMMT:86147833:-:fusion","SLC25A26--IMMT","ENSG00000144741","ENSG00000132305",20.0,1.0,1.0,1.0,0.725495204524331,0.0]
["TCGA_GBM","TCGA-76-4926-01B","1:ACAP3:1307769:-:1:DVL1:1342758:-:rev","ACAP3--DVL1","ENSG00000131584","ENSG00000107404",3.0,2.0,2.0,2.0,0.843,"NA"]
["TCGA_HNSC","TCGA-BA-4076-01A","6:AIG1:143165183:+:6:AL133346.1:132077208:+:rev","AIG1--AL133346.1","ENSG00000146416","ENSG00000227220",43.0,1.0,1.0,1.0,0.974713642924193,0.00243902439024]
["TCGA_HNSC","TCGA-BA-5555-01A","13:EBPL:49691254:-:13:LPAR6:48422790:-:reg","EBPL--LPAR6","ENSG00000123179","ENSG00000139679",3.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_HNSC","TCGA-BA-6869-01A","17:PEMT:17576920:-:17:RAI1:17724028:+:strandcross","PEMT--RAI1","ENSG00000133027","ENSG00000108557",5.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_HNSC","TCGA-BA-6872-01A","2:LYPD1:132668400:-:2:NCKAP5:132732051:-:rev","LYPD1--NCKAP5","ENSG00000150551","ENSG00000176771",3.0,1.0,1.0,1.0,0.465,"NA"]
["TCGA_HNSC","TCGA-BA-A6D8-01A","14:PCNX1:71103669:+:14:TTLL5:75954424:+:reg","PCNX1--TTLL5","ENSG00000100731","ENSG00000119685",7.0,1.0,1.0,1.0,0.403,0.00980392156863]
["TCGA_HNSC","TCGA-BA-A8YP-01A","13:LINC00393:73546724:-:13:KLF12:73695671:-:rev","LINC00393--KLF12","ENSG00000224853","ENSG00000118922",4.0,1.0,1.0,1.0,0.473,"NA"]
["TCGA_HNSC","TCGA-BB-4225-01A","1:DIEXF:209842447:+:1:AC092810.3:209147594:-:strandcross","DIEXF--AC092810.3","ENSG00000117597","ENSG00000232537",4.0,1.0,1.0,1.0,0.656,0.010395010395]
["TCGA_HNSC","TCGA-C9-A47Z-01A","9:AK3:4741972:-:9:IL33:6241684:+:strandcross","AK3--IL33","ENSG00000147853","ENSG00000137033",2.0,1.0,1.0,1.0,0.826,0.00519031141869]
["TCGA_HNSC","TCGA-CN-4739-01A","2:AC098820.1:216498607:-:2:PSMD1:231146240:+:strandcross","AC098820.1--PSMD1","ENSG00000232485","ENSG00000173692",9.0,1.0,1.0,1.0,0.559,0.00826446280992]
["TCGA_HNSC","TCGA-CN-5359-01A","17:JUP:41764713:-:17:P3H4:41803431:-:rev","JUP--P3H4","ENSG00000173801","ENSG00000141696",109.0,1.0,1.0,1.0,0.953084356029969,"NA"]
["TCGA_HNSC","TCGA-CN-5370-01A","17:EFTUD2:44879556:-:17:KRT24:40701933:-:reg","EFTUD2--KRT24","ENSG00000108883","ENSG00000167916",84.0,1.0,1.0,1.0,0.941658930180367,0.0]
["TCGA_HNSC","TCGA-CN-6024-01A","20:CBFA2T2:33490301:+:20:HM13:31544947:+:rev","CBFA2T2--HM13","ENSG00000078699","ENSG00000101294",20.0,1.0,1.0,1.0,0.185145823345246,0.0246913580247]
["TCGA_HNSC","TCGA-CN-A49C-01A","9:EXOSC3:37783914:-:9:SHB:38016131:-:rev","EXOSC3--SHB","ENSG00000255872","ENSG00000255872",2.0,1.0,1.0,1.0,0.847,"NA"]
["TCGA_HNSC","TCGA-CN-A63W-01A","15:PEAK1:77158503:-:15:LINGO1:77677174:-:rev","PEAK1--LINGO1","ENSG00000173517","ENSG00000169783",6.0,1.0,1.0,1.0,0.71,"NA"]
["TCGA_HNSC","TCGA-CQ-5332-01A","11:PANX1:94129493:+:11:HEPHL1:94111537:+:rev","PANX1--HEPHL1","ENSG00000110218","ENSG00000181333",6.0,1.0,1.0,1.0,0.924,"NA"]
["TCGA_HNSC","TCGA-CQ-6228-01A","1:LYST:235716712:-:1:TSNAX-DISC1:231795242:+:strandcross","LYST--TSNAX-DISC1","ENSG00000143669","ENSG00000270106",3.0,1.0,1.0,1.0,0.945,0.00218818380744]
["TCGA_HNSC","TCGA-CQ-A4C7-01A","3:FNDC3B:172133546:+:15:KLF13:31435370:+:fusion","FNDC3B--KLF13","ENSG00000075420","ENSG00000169926",5.0,1.0,1.0,1.0,0.563,0.00426439232409]
["TCGA_HNSC","TCGA-CR-5243-01A","14:MOK:102250812:-:20:PRND:4724541:+:fusion","MOK--PRND","ENSG00000080823","ENSG00000171864",2.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_HNSC","TCGA-CR-6474-01A","16:MVP:29831073:+:16:ZNF267:31914476:+:reg","MVP--ZNF267","ENSG00000013364","ENSG00000185947",22.0,1.0,1.0,1.0,0.538161057732486,0.00575815738964]
["TCGA_HNSC","TCGA-CR-6480-01A","22:PPARA:46176836:+:12:SLC16A7:59655152:+:fusion","PPARA--SLC16A7","ENSG00000186951","ENSG00000118596",7.0,1.0,1.0,1.0,0.957,0.0]
["TCGA_HNSC","TCGA-CR-7369-01A","17:RPS6KB1:59893325:+:17:VMP1:59838295:+:rev","RPS6KB1--VMP1","ENSG00000108443","ENSG00000062716",19.0,8.0,8.0,5.0,0.792314644079154,"NA"]
["TCGA_HNSC","TCGA-CR-7380-01A","15:IDH3A:78149430:+:15:SH2D7:78094116:+:rev","IDH3A--SH2D7","ENSG00000166411","ENSG00000183476",2.0,1.0,1.0,1.0,0.922,"NA"]
["TCGA_HNSC","TCGA-CR-7399-01A","9:AK3:4722506:-:9:RCL1:4823548:+:strandcross","AK3--RCL1","ENSG00000147853","ENSG00000120158",65.0,1.0,1.0,1.0,0.951780813720326,0.0]
["TCGA_HNSC","TCGA-CV-5432-01A","2:EXOC6B:72741304:-:2:AC092650.1:47943612:-:reg","EXOC6B--AC092650.1","ENSG00000144036","ENSG00000230773",11.0,1.0,1.0,1.0,0.415,0.0251046025105]
["TCGA_HNSC","TCGA-CV-5443-01A","20:TM9SF4:32143105:+:20:FO393401.1:35477945:-:strandcross","TM9SF4--FO393401.1","ENSG00000101337","ENSG00000230155",4.0,1.0,1.0,1.0,0.781,0.00950118764846]
["TCGA_HNSC","TCGA-CV-6433-01A","20:RALY:33994131:+:20:ASXL1:32428128:+:rev","RALY--ASXL1","ENSG00000125970","ENSG00000171456",2.0,1.0,1.0,1.0,0.985,0.00221729490022]
["TCGA_HNSC","TCGA-CV-6937-01A","20:AL136531.2:1392834:-:20:CDS2:5189067:+:strandcross","AL136531.2--CDS2","ENSG00000274322","ENSG00000101290",33.0,1.0,1.0,1.0,0.754501409302684,0.00694444444444]
["TCGA_HNSC","TCGA-CV-6941-01A","22:SH3BP1:37643788:+:22:CACNA1I:39661965:+:reg","SH3BP1--CACNA1I","ENSG00000100092","ENSG00000100346",7.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_HNSC","TCGA-CV-6953-01A","19:SELENOW:47778814:+:19:EHD2:47716558:+:rev","SELENOW--EHD2","ENSG00000178980","ENSG00000024422",2.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_HNSC","TCGA-CV-6961-01A","13:DLEU2:50068097:-:13:RNASEH2B-AS1:50882645:-:rev","DLEU2--RNASEH2B-AS1","ENSG00000231607","ENSG00000233672",2.0,1.0,1.0,1.0,0.911,"NA"]
["TCGA_HNSC","TCGA-CV-7102-01A","15:EFL1:82214717:-:13:CDADC1:49274291:+:fusion","EFL1--CDADC1","ENSG00000140598","ENSG00000102543",14.0,1.0,1.0,1.0,0.61,0.00884955752212]
["TCGA_HNSC","TCGA-CV-7238-01A","19:MED26:16627872:-:19:SMIM7:16631724:-:rev","MED26--SMIM7","ENSG00000141979","ENSG00000214046",2.0,2.0,2.0,2.0,0.991,"NA"]
["TCGA_HNSC","TCGA-CV-7253-01A","8:GRHL2:101492789:+:13:TRIM13:50011935:+:fusion","GRHL2--TRIM13","ENSG00000083307","ENSG00000204977",5.0,1.0,1.0,1.0,0.94,0.00149476831091]
["TCGA_HNSC","TCGA-CV-7407-01A","1:CDC42BPA:227080893:-:10:PRKG1:51153164:+:fusion","CDC42BPA--PRKG1","ENSG00000143776","ENSG00000185532",3.0,1.0,1.0,1.0,0.675,0.00176991150442]
["TCGA_HNSC","TCGA-CV-7410-01A","3:LPP:188341719:+:3:CLSTN2:140532324:+:rev","LPP--CLSTN2","ENSG00000145012","ENSG00000158258",2.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_HNSC","TCGA-CV-7421-01A","X:FTX:74274342:-:X:PDZD11:70289354:-:reg","FTX--PDZD11","ENSG00000230590","ENSG00000120509",4.0,1.0,1.0,1.0,0.839,0.00301204819277]
["TCGA_HNSC","TCGA-CV-7429-01A","17:GNA13:65053502:-:10:BMI1:22328134:+:fusion","GNA13--BMI1","ENSG00000120063","ENSG00000269897",14.0,1.0,1.0,1.0,0.225,0.00943396226415]
["TCGA_HNSC","TCGA-CV-7437-01A","7:FAM20C:195732:+:7:SEPT7-AS1:35758273:-:strandcross","FAM20C--SEPT7-AS1","ENSG00000177706","ENSG00000228878",1.0,1.0,1.0,1.0,0.687,0.0020202020202]
["TCGA_HNSC","TCGA-CV-A45T-01A","11:HTATIP2:20367281:+:16:CHMP1A:89647331:-:fusion","HTATIP2--CHMP1A","ENSG00000109854","ENSG00000131165",1.0,1.0,1.0,1.0,0.791,0.00158227848101]
["TCGA_HNSC","TCGA-CV-A45Z-01A","20:AL391095.2:38378872:+:20:LBP:38368995:+:rev","AL391095.2--LBP","ENSG00000275285","ENSG00000129988",3.0,1.0,1.0,1.0,0.73,"NA"]
["TCGA_HNSC","TCGA-CV-A6JE-01A","8:PVT1:127939676:+:14:SYT16:62100394:+:fusion","PVT1--SYT16","ENSG00000249859","ENSG00000139973",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_HNSC","TCGA-CV-A6JE-01A","19:MBD3:1592522:-:19:REXO1:1828631:-:rev","MBD3--REXO1","ENSG00000071655","ENSG00000079313",4.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_HNSC","TCGA-CX-7086-01A","15:CA12:63375658:-:15:AC007950.1:63456817:-:rev","CA12--AC007950.1","ENSG00000074410","ENSG00000259268",21.0,1.0,1.0,1.0,0.498612278966792,"NA"]
["TCGA_HNSC","TCGA-D6-6827-01A","13:FAM155A:107865682:-:X:AL157778.1:98644528:+:fusion","FAM155A--AL157778.1","ENSG00000204442","ENSG00000281566",2.0,1.0,1.0,1.0,0.537,0.00666666666667]
["TCGA_HNSC","TCGA-D6-A6EO-01A","4:FAM160A1:151409465:+:4:HPF1:169753835:-:strandcross","FAM160A1--HPF1","ENSG00000164142","ENSG00000056050",26.0,1.0,1.0,1.0,0.659372413963372,0.001221001221]
["TCGA_HNSC","TCGA-F7-7848-01A","11:MRPL21:68892890:-:11:SHANK2:70473439:-:rev","MRPL21--SHANK2","ENSG00000197345","ENSG00000162105",84.0,1.0,1.0,1.0,0.855219874735342,0.0]
["TCGA_HNSC","TCGA-F7-7848-01A","4:TMPRSS11E:68447523:+:14:DHRS4-AS1:23941158:-:fusion","TMPRSS11E--DHRS4-AS1","ENSG00000087128","ENSG00000215256",26.0,1.0,1.0,1.0,0.802835038679272,0.00242130750605]
["TCGA_HNSC","TCGA-F7-A623-01A","4:BMP2K:78776721:+:4:LINC01094:78680761:+:rev","BMP2K--LINC01094","ENSG00000138756","ENSG00000251442",2.0,1.0,1.0,1.0,0.963,"NA"]
["TCGA_HNSC","TCGA-HD-8224-01A","4:NSD2:1901251:+:7:PHTF2:77893608:+:fusion","NSD2--PHTF2","ENSG00000109685","ENSG00000006576",15.0,1.0,1.0,1.0,0.968,0.00323624595469]
["TCGA_HNSC","TCGA-IQ-7631-01A","11:LRP5:68312805:+:19:ZNF317:9155925:+:fusion","LRP5--ZNF317","ENSG00000162337","ENSG00000130803",7.0,1.0,1.0,1.0,0.94,0.00311526479751]
["TCGA_HNSC","TCGA-KU-A66T-01A","X:KDM5C:53216074:-:X:HUWE1:53680186:-:rev","KDM5C--HUWE1","ENSG00000126012","ENSG00000086758",52.0,1.0,1.0,1.0,0.815188713263814,"NA"]
["TCGA_HNSC","TCGA-MZ-A5BI-01A","8:ZFPM2:105634357:+:8:ANXA13:123681359:-:strandcross","ZFPM2--ANXA13","ENSG00000169946","ENSG00000104537",55.0,1.0,1.0,1.0,0.848591849872599,0.00446428571429]
["TCGA_HNSC","TCGA-P3-A6T4-01A","12:CHST11:104601991:+:12:TXNRD1:104348353:+:rev","CHST11--TXNRD1","ENSG00000171310","ENSG00000198431",1.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_HNSC","TCGA-QK-A6IJ-01A","20:RALY:33994131:+:20:PXMP4:33714736:-:strandcross","RALY--PXMP4","ENSG00000125970","ENSG00000101417",13.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_HNSC","TCGA-QK-A8ZB-01A","3:IL20RB:136946295:+:12:HEBP1:12975479:-:fusion","IL20RB--HEBP1","ENSG00000158092","ENSG00000013583",59.0,1.0,1.0,1.0,0.802245257004779,0.00371057513915]
["TCGA_HNSC","TCGA-T2-A6WZ-01A","11:MACROD1:64151239:-:11:BAD:64284376:-:rev","MACROD1--BAD","ENSG00000133315","ENSG00000002330",6.0,2.0,2.0,1.0,0.887,"NA"]
["TCGA_HNSC","TCGA-UF-A71E-01A","10:EPC1:32305772:-:2:QPCT:37359580:+:fusion","EPC1--QPCT","ENSG00000120616","ENSG00000115828",14.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_HNSC","TCGA-UF-A7JJ-01A","12:AEBP2:19473355:+:12:PIK3C2G:18609535:+:rev","AEBP2--PIK3C2G","ENSG00000139154","ENSG00000139144",3.0,1.0,1.0,1.0,0.984,"NA"]
["TCGA_KICH","TCGA-KL-8328-01A","20:C20orf194:3407475:-:20:ADRA1D:4222130:-:rev","C20orf194--ADRA1D","ENSG00000088854","ENSG00000171873",2.0,1.0,1.0,1.0,0.788,"NA"]
["TCGA_KICH","TCGA-KL-8341-01A","3:SUSD5:33213928:-:8:AC021237.1:109315203:+:fusion","SUSD5--AC021237.1","ENSG00000173705","ENSG00000250267",3.0,1.0,1.0,1.0,0.631,0.0108401084011]
["TCGA_KICH","TCGA-KN-8427-01A","5:HNRNPH1:179623037:-:17:RPL26:8382315:-:fusion","HNRNPH1--RPL26","ENSG00000169045","ENSG00000263809",3.0,1.0,1.0,1.0,0.184,0.0217391304348]
["TCGA_KIRC","TCGA-A3-3313-01A","6:PTCHD4:48008634:-:6:CD2AP:47503280:+:strandcross","PTCHD4--CD2AP","ENSG00000244694","ENSG00000198087",44.0,1.0,1.0,1.0,0.862088315367767,0.00531914893617]
["TCGA_KIRC","TCGA-A3-3335-01A","5:MARCH6:10426522:+:1:AL359915.2:119233458:+:fusion","MARCH6--AL359915.2","ENSG00000145495","ENSG00000231365",1.0,1.0,1.0,1.0,0.865,0.0]
["TCGA_KIRC","TCGA-AK-3434-01A","6:RNF144B:18427685:+:6:KDM1B:18159883:+:rev","RNF144B--KDM1B","ENSG00000137393","ENSG00000165097",2.0,1.0,1.0,1.0,0.884,"NA"]
["TCGA_KIRC","TCGA-AS-3777-01A","18:ATP8B1:57695171:-:1:SLC50A1:155136299:+:fusion","ATP8B1--SLC50A1","ENSG00000081923","ENSG00000169241",6.0,2.0,2.0,2.0,0.797,0.00591715976331]
["TCGA_KIRC","TCGA-B0-4688-01A","10:FBXO18:5918478:+:10:ITGA8:15606422:-:strandcross","FBXO18--ITGA8","ENSG00000134452","ENSG00000077943",72.0,1.0,1.0,1.0,0.963366802363214,0.00436681222707]
["TCGA_KIRC","TCGA-B0-4703-01A","22:MIEF1:39504534:+:22:TAB1:39415006:+:rev","MIEF1--TAB1","ENSG00000100335","ENSG00000100324",2.0,1.0,1.0,1.0,0.986,"NA"]
["TCGA_KIRC","TCGA-B0-4841-01A","4:SCFD2:53273826:-:4:FIP1L1:53425872:+:strandcross","SCFD2--FIP1L1","ENSG00000184178","ENSG00000145216",3.0,2.0,1.0,1.0,0.987,0.0]
["TCGA_KIRC","TCGA-B0-5084-01A","19:ELOF1:11559191:-:19:RDH8:10017057:+:strandcross","ELOF1--RDH8","ENSG00000130165","ENSG00000080511",123.0,1.0,1.0,1.0,0.990844823092512,0.0]
["TCGA_KIRC","TCGA-B0-5692-01A","16:TXNDC11:11742477:-:16:SRRM2-AS1:2743719:-:reg","TXNDC11--SRRM2-AS1","ENSG00000153066","ENSG00000205913",11.0,1.0,1.0,1.0,0.411,0.0142348754448]
["TCGA_KIRC","TCGA-B2-4102-01A","12:ZCCHC8:122498827:-:12:RSRC2:122505706:-:rev","ZCCHC8--RSRC2","ENSG00000033030","ENSG00000111011",47.0,10.0,9.0,9.0,0.932600307385721,"NA"]
["TCGA_KIRC","TCGA-B8-4622-01A","10:CACNB2:18340977:+:10:STAM:17684675:+:rev","CACNB2--STAM","ENSG00000165995","ENSG00000136738",1.0,1.0,1.0,1.0,0.845,"NA"]
["TCGA_KIRC","TCGA-BP-4173-01A","13:PCCA:100209463:+:13:DIAPH3:60042820:-:strandcross","PCCA--DIAPH3","ENSG00000175198","ENSG00000139734",2.0,1.0,1.0,1.0,0.862,0.00380952380952]
["TCGA_KIRC","TCGA-BP-4352-01A","21:AF064860.1:39630490:+:21:SH3BGR:39499823:+:rev","AF064860.1--SH3BGR","ENSG00000225330","ENSG00000185437",2.0,1.0,1.0,1.0,0.612,"NA"]
["TCGA_KIRC","TCGA-BP-4787-01A","5:FER:108835807:+:5:AC099520.2:104799306:+:rev","FER--AC099520.2","ENSG00000151422","ENSG00000253776",3.0,1.0,1.0,1.0,0.829,0.00796812749004]
["TCGA_KIRC","TCGA-BP-4973-01A","5:SLC12A7:1060344:-:14:EGLN3-AS1:34041205:+:fusion","SLC12A7--EGLN3-AS1","ENSG00000113504","ENSG00000258897",2.0,1.0,1.0,1.0,0.822,0.00534759358289]
["TCGA_KIRC","TCGA-BP-4983-01A","9:AK3:4740937:-:9:DOCK8:379771:+:strandcross","AK3--DOCK8","ENSG00000147853","ENSG00000107099",20.0,1.0,1.0,1.0,0.915573019625859,0.00333889816361]
["TCGA_KIRC","TCGA-BP-5004-01A","5:FAM172A:94050731:-:5:ERAP2:96915688:+:strandcross","FAM172A--ERAP2","ENSG00000113391","ENSG00000164308",2.0,1.0,1.0,1.0,0.698,0.00584795321637]
["TCGA_KIRC","TCGA-BP-5196-01A","2:FN1:215433324:-:2:WDSUB1:159236190:-:reg","FN1--WDSUB1","ENSG00000115414","ENSG00000196151",6.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_KIRC","TCGA-BP-5200-01A","10:ITGB1:32911886:-:7:IGFBP3:45917439:-:fusion","ITGB1--IGFBP3","ENSG00000150093","ENSG00000146674",1.0,1.0,1.0,1.0,0.877,0.00478468899522]
["TCGA_KIRC","TCGA-CJ-4901-01A","19:TICAM1:4831614:-:17:VMP1:59811670:+:fusion","TICAM1--VMP1","ENSG00000127666","ENSG00000062716",8.0,1.0,1.0,1.0,0.912,0.00831024930748]
["TCGA_KIRC","TCGA-CJ-5681-01A","21:CXADR:17513172:+:X:CMC4:155064033:-:fusion","CXADR--CMC4","ENSG00000154639","ENSG00000182712",5.0,1.0,1.0,1.0,0.264,0.00874635568513]
["TCGA_KIRC","TCGA-CJ-5681-01A","X:DCX:111330919:-:X:PASD1:151664119:+:strandcross","DCX--PASD1","ENSG00000077279","ENSG00000166049",1.0,1.0,1.0,1.0,0.716,0.00291545189504]
["TCGA_KIRC","TCGA-CW-5590-01A","17:WSCD1:6095223:+:17:NLRP1:5499950:-:strandcross","WSCD1--NLRP1","ENSG00000179314","ENSG00000091592",5.0,1.0,1.0,1.0,0.438,0.0127659574468]
["TCGA_KIRC","TCGA-CZ-4865-01A","14:FBXO34:55271537:+:8:RALYL:84774579:+:fusion","FBXO34--RALYL","ENSG00000178974","ENSG00000184672",13.0,1.0,1.0,1.0,0.678,0.005]
["TCGA_KIRC","TCGA-CZ-4866-01A","4:TBC1D14:6924111:+:4:KIAA0232:6871574:+:rev","TBC1D14--KIAA0232","ENSG00000132405","ENSG00000170871",4.0,1.0,1.0,1.0,0.957,"NA"]
["TCGA_KIRP","TCGA-2Z-A9J2-01A","5:MRPL22:154941265:+:5:LARP1:154790325:+:rev","MRPL22--LARP1","ENSG00000082515","ENSG00000155506",2.0,1.0,1.0,1.0,0.906,"NA"]
["TCGA_KIRP","TCGA-5P-A9JZ-01A","7:SND1:127807573:+:7:AKAP9:92105678:+:rev","SND1--AKAP9","ENSG00000197157","ENSG00000127914",5.0,1.0,1.0,1.0,0.24,0.0182291666667]
["TCGA_KIRP","TCGA-A4-A5Y0-01A","2:INPP1:190360306:+:2:HECW2:196493375:-:strandcross","INPP1--HECW2","ENSG00000151689","ENSG00000138411",2.0,1.0,1.0,1.0,0.907,0.00246305418719]
["TCGA_KIRP","TCGA-B9-4116-01A","7:AC004917.1:106760566:-:7:DUS4L:107576366:+:strandcross","AC004917.1--DUS4L","ENSG00000243797","ENSG00000105865",17.0,1.0,1.0,1.0,0.618281986232888,0.0168776371308]
["TCGA_KIRP","TCGA-B9-A5W9-01A","5:CLPTM1L:1341671:-:5:AC012629.2:10767624:+:strandcross","CLPTM1L--AC012629.2","ENSG00000049656","ENSG00000272324",91.0,1.0,1.0,1.0,0.905117561362427,0.0]
["TCGA_KIRP","TCGA-B9-A69E-01A","6:CUL9:43188118:+:6:KIF6:39343815:-:strandcross","CUL9--KIF6","ENSG00000112659","ENSG00000164627",23.0,1.0,1.0,1.0,0.878660711796188,0.004662004662]
["TCGA_KIRP","TCGA-BQ-5888-01A","3:CTNNB1:41199670:+:3:ULK4:41663699:-:strandcross","CTNNB1--ULK4","ENSG00000168036","ENSG00000168038",3.0,4.0,2.0,2.0,0.538,0.0046511627907]
["TCGA_KIRP","TCGA-BQ-7053-01A","9:NOTCH1:136503182:-:17:HNF1B:37733821:-:fusion","NOTCH1--HNF1B","ENSG00000148400","ENSG00000275410",56.0,1.0,1.0,1.0,0.948033907651489,0.0]
["TCGA_KIRP","TCGA-F9-A4JJ-01A","19:CLASRP:45053177:+:19:ZNF524:55602075:+:reg","CLASRP--ZNF524","ENSG00000104859","ENSG00000171443",4.0,1.0,1.0,1.0,0.317,0.00662251655629]
["TCGA_KIRP","TCGA-G7-6793-01A","16:MYH11:15719585:-:16:NDE1:15677801:+:strandcross","MYH11--NDE1","ENSG00000133392","ENSG00000072864",11.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_KIRP","TCGA-G7-6793-01A","3:KLHL24:183672484:+:3:ATP11B:182913861:+:rev","KLHL24--ATP11B","ENSG00000114796","ENSG00000058063",19.0,1.0,2.0,1.0,0.64096550546139,"NA"]
["TCGA_KIRP","TCGA-GL-A9DE-01A","14:CTAGE5:39327022:+:14:TTC6:37682758:+:rev","CTAGE5--TTC6","ENSG00000258941","ENSG00000139865",2.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_KIRP","TCGA-IZ-A6M9-01A","13:UBAC2:99340565:+:13:FARP1:98425440:+:rev","UBAC2--FARP1","ENSG00000134882","ENSG00000152767",2.0,1.0,1.0,1.0,0.969,"NA"]
["TCGA_KIRP","TCGA-P4-A5EB-01A","22:PLXNB2:50283602:-:5:MAST4:66899951:+:fusion","PLXNB2--MAST4","ENSG00000196576","ENSG00000069020",15.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_KIRP","TCGA-P4-AAVM-01A","12:LTBR:6386444:+:9:PRSS3:33796643:+:fusion","LTBR--PRSS3","ENSG00000111321","ENSG00000010438",240.0,1.0,1.0,1.0,0.994355528090357,0.0]
["TCGA_KIRP","TCGA-UZ-A9PN-01A","5:RETREG1:16565763:-:5:TERT:1282624:-:reg","RETREG1--TERT","ENSG00000154153","ENSG00000164362",5.0,1.0,1.0,1.0,0.764,0.00709219858156]
["TCGA_LAML","TCGA-AB-2807-03A","13:XPO4:20902670:-:13:ZDHHC20:21425678:-:rev","XPO4--ZDHHC20","ENSG00000132953","ENSG00000180776",2.0,2.0,2.0,1.0,0.641,"NA"]
["TCGA_LAML","TCGA-AB-2813-03A","5:SREK1:66144537:+:5:LINC02057:61252889:-:strandcross","SREK1--LINC02057","ENSG00000153914","ENSG00000249279",3.0,1.0,1.0,1.0,0.345,0.00338409475465]
["TCGA_LAML","TCGA-AB-2832-03A","10:MLLT10:21651768:+:11:PPP2R1B:111755450:-:fusion","MLLT10--PPP2R1B","ENSG00000078403","ENSG00000137713",8.0,1.0,1.0,1.0,0.969,0.0]
["TCGA_LAML","TCGA-AB-2841-03B","17:RARA:40331396:+:15:PML:74034478:+:fusion","RARA--PML","ENSG00000131759","ENSG00000140464",28.0,4.0,4.0,4.0,0.89039793617536,0.0]
["TCGA_LAML","TCGA-AB-2856-03A","11:NUP98:3744509:-:5:NSD1:177235821:+:fusion","NUP98--NSD1","ENSG00000110713","ENSG00000165671",2.0,3.0,2.0,2.0,0.809,0.00630914826498]
["TCGA_LAML","TCGA-AB-2868-03A","9:MIR181A2HG:124658741:+:9:OBP2B:133206416:-:strandcross","MIR181A2HG--OBP2B","ENSG00000224020","ENSG00000171102",3.0,1.0,1.0,1.0,0.23,0.0028328611898]
["TCGA_LAML","TCGA-AB-2883-03A","11:KMT2A:118484314:+:6:AFDN:167864551:+:fusion","KMT2A--AFDN","ENSG00000118058","ENSG00000130396",14.0,1.0,1.0,1.0,0.702,0.0]
["TCGA_LAML","TCGA-AB-2901-03A","9:ABL1:130714455:+:22:BCR:23292541:+:fusion","ABL1--BCR","ENSG00000097007","ENSG00000186716",9.0,2.0,2.0,2.0,0.996,0.0]
["TCGA_LAML","TCGA-AB-2920-03B","12:CHST11:104601991:+:X:ATP1B4:120366525:+:fusion","CHST11--ATP1B4","ENSG00000171310","ENSG00000101892",12.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_LAML","TCGA-AB-2938-03A","17:POLR2A:7484857:+:19:FBN3:8091590:-:fusion","POLR2A--FBN3","ENSG00000181222","ENSG00000142449",21.0,1.0,1.0,1.0,0.875460885124509,0.002331002331]
["TCGA_LAML","TCGA-AB-2944-03A","22:BCR:23182239:+:9:ABL1:130854064:+:fusion","BCR--ABL1","ENSG00000186716","ENSG00000097007",4.0,2.0,2.0,2.0,0.191,0.00568181818182]
["TCGA_LAML","TCGA-AB-2964-03A","19:AC092295.1:36534992:+:19:ZNF543:57323682:+:reg","AC092295.1--ZNF543","ENSG00000228629","ENSG00000178229",4.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_LAML","TCGA-AB-2994-03A","10:CCAR1:68773099:+:10:HNRNPH3:68337199:+:rev","CCAR1--HNRNPH3","ENSG00000060339","ENSG00000096746",2.0,1.0,2.0,1.0,0.768,"NA"]
["TCGA_LGG","TCGA-CS-4943-01A","10:ARL5B:18659683:+:18:CCDC102B:68716528:+:fusion","ARL5B--CCDC102B","ENSG00000165997","ENSG00000150636",4.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_LGG","TCGA-CS-5397-01A","9:RUSC2:35490172:+:16:ABAT:8764069:+:fusion","RUSC2--ABAT","ENSG00000198853","ENSG00000183044",37.0,1.0,1.0,1.0,0.921387265816102,0.0061919504644]
["TCGA_LGG","TCGA-DB-5270-01A","19:SHC2:440862:-:19:TJP3:3750138:+:strandcross","SHC2--TJP3","ENSG00000129946","ENSG00000105289",5.0,1.0,1.0,1.0,0.278,0.0338164251208]
["TCGA_LGG","TCGA-DB-A4XF-01A","X:ATRX:77785982:-:18:BCL2:63128759:-:fusion","ATRX--BCL2","ENSG00000085224","ENSG00000171791",27.0,1.0,1.0,1.0,0.821692080976008,0.0133333333333]
["TCGA_LGG","TCGA-DH-A669-01A","10:PIP4K2A:22607927:-:4:IGFBP7-AS1:57204478:+:fusion","PIP4K2A--IGFBP7-AS1","ENSG00000150867","ENSG00000245067",2.0,1.0,1.0,1.0,0.399,0.0120240480962]
["TCGA_LGG","TCGA-DH-A669-02A","4:ACSL1:184803320:-:10:AL583859.2:10422774:-:fusion","ACSL1--AL583859.2","ENSG00000151726","ENSG00000270111",16.0,2.0,2.0,2.0,0.841217078174842,0.00564971751412]
["TCGA_LGG","TCGA-DU-5853-01A","9:SNX30:112751157:+:9:LPAR1:110875722:-:strandcross","SNX30--LPAR1","ENSG00000148158","ENSG00000198121",2.0,1.0,1.0,1.0,0.753,0.0106761565836]
["TCGA_LGG","TCGA-DU-5872-01A","14:HIF1A:61695839:+:14:PRKCH:61445692:+:rev","HIF1A--PRKCH","ENSG00000100644","ENSG00000027075",1.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_LGG","TCGA-DU-6401-01A","18:DYM:49460398:-:18:MYL12B:3272884:+:strandcross","DYM--MYL12B","ENSG00000141627","ENSG00000118680",3.0,1.0,1.0,1.0,0.971,0.0]
["TCGA_LGG","TCGA-DU-6404-02B","X:BCOR:40072349:-:22:L3MBTL2:41209696:+:fusion","BCOR--L3MBTL2","ENSG00000183337","ENSG00000100395",19.0,3.0,3.0,3.0,0.811935489433462,0.00630914826498]
["TCGA_LGG","TCGA-DU-6542-01A","1:KDM5B:202808102:-:1:UAP1:162566012:+:strandcross","KDM5B--UAP1","ENSG00000117139","ENSG00000117143",5.0,1.0,1.0,1.0,0.956,0.00384615384615]
["TCGA_LGG","TCGA-DU-7006-01A","17:GNA13:65053502:-:5:NR3C1:143282725:-:fusion","GNA13--NR3C1","ENSG00000120063","ENSG00000113580",8.0,1.0,1.0,1.0,0.528,0.0160857908847]
["TCGA_LGG","TCGA-DU-7007-01A","8:RRM2B:102238827:-:8:BAALC-AS1:103268472:-:rev","RRM2B--BAALC-AS1","ENSG00000048392","ENSG00000247081",5.0,1.0,1.0,1.0,0.276,0.0252100840336]
["TCGA_LGG","TCGA-DU-7013-01A","12:DCTN2:57532015:-:12:TSPAN31:57745745:+:strandcross","DCTN2--TSPAN31","ENSG00000175203","ENSG00000135452",2.0,1.0,1.0,1.0,0.433,0.0294784580499]
["TCGA_LGG","TCGA-DU-7292-01A","1:NFASC:204988806:+:1:ATP2B4:203739546:+:rev","NFASC--ATP2B4","ENSG00000163531","ENSG00000058668",6.0,1.0,1.0,1.0,0.905,0.00757575757576]
["TCGA_LGG","TCGA-DU-7292-01A","1:TMCC2:205242044:+:1:LINC01353:203287989:+:rev","TMCC2--LINC01353","ENSG00000133069","ENSG00000231507",57.0,1.0,1.0,1.0,0.864039000958688,0.0113636363636]
["TCGA_LGG","TCGA-DU-7306-01A","19:NDUFS7:1383942:+:19:CNN2:1031071:+:rev","NDUFS7--CNN2","ENSG00000115286","ENSG00000064666",31.0,1.0,1.0,1.0,0.871233814488839,"NA"]
["TCGA_LGG","TCGA-DU-8167-01A","12:TMEM132D:129531059:-:12:GALNT9:132203690:-:rev","TMEM132D--GALNT9","ENSG00000151952","ENSG00000182870",2.0,1.0,1.0,1.0,0.939,0.004329004329]
["TCGA_LGG","TCGA-DU-A5TY-01A","7:ADCYAP1R1:31092735:+:7:DFNA5:24710388:-:strandcross","ADCYAP1R1--DFNA5","ENSG00000078549","ENSG00000105928",12.0,1.0,1.0,1.0,0.284,0.0144927536232]
["TCGA_LGG","TCGA-DU-A6S7-01A","10:ZNF37A:38095804:+:10:MINDY3:15796172:-:strandcross","ZNF37A--MINDY3","ENSG00000075407","ENSG00000148481",3.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_LGG","TCGA-DU-A7TD-01A","1:NFASC:204828782:+:1:ATP2B4:203698157:+:rev","NFASC--ATP2B4","ENSG00000163531","ENSG00000058668",321.0,1.0,1.0,1.0,0.988397082976976,0.0028818443804]
["TCGA_LGG","TCGA-E1-5302-01A","11:NUMA1:72069842:-:11:FOLR1:72192166:+:strandcross","NUMA1--FOLR1","ENSG00000137497","ENSG00000110195",6.0,1.0,1.0,1.0,0.557,0.0192307692308]
["TCGA_LGG","TCGA-E1-5304-01A","5:MTMR12:32312758:-:3:LINC02006:153386016:-:fusion","MTMR12--LINC02006","ENSG00000150712","ENSG00000238755",5.0,1.0,1.0,1.0,0.647,0.00840336134454]
["TCGA_LGG","TCGA-E1-A7YD-01A","12:TSFM:57787162:+:12:CYP27B1:57766197:-:strandcross","TSFM--CYP27B1","ENSG00000123297","ENSG00000111012",152.0,1.0,1.0,1.0,0.993812359028015,0.0]
["TCGA_LGG","TCGA-E1-A7YI-01A","4:SCFD2:53273826:-:4:LNX1:53574088:-:rev","SCFD2--LNX1","ENSG00000184178","ENSG00000072201",4.0,1.0,1.0,1.0,0.772,"NA"]
["TCGA_LGG","TCGA-E1-A7YL-01A","19:ZSCAN18:58098174:-:18:ATP9B:79303604:+:fusion","ZSCAN18--ATP9B","ENSG00000121413","ENSG00000166377",43.0,1.0,1.0,1.0,0.949191163540207,0.00475059382423]
["TCGA_LGG","TCGA-E1-A7Z2-01A","19:AKT2:40265222:-:19:ZNF576:43597094:+:strandcross","AKT2--ZNF576","ENSG00000105221","ENSG00000124444",13.0,1.0,1.0,1.0,0.704,0.015873015873]
["TCGA_LGG","TCGA-FG-5963-01A","11:HARBI1:46615568:-:7:TNS3:47305003:-:fusion","HARBI1--TNS3","ENSG00000180423","ENSG00000136205",3.0,2.0,2.0,2.0,0.705,0.0147492625369]
["TCGA_LGG","TCGA-FG-5963-02A","11:HARBI1:46615568:-:7:TNS3:47305003:-:fusion","HARBI1--TNS3","ENSG00000180423","ENSG00000136205",10.0,2.0,2.0,2.0,0.987,0.0]
["TCGA_LGG","TCGA-FG-5965-02A","8:SPIDR:47700490:+:19:COX6B1:35658594:+:fusion","SPIDR--COX6B1","ENSG00000164808","ENSG00000126267",16.0,1.0,1.0,1.0,0.833292210844795,0.00266666666667]
["TCGA_LGG","TCGA-FG-A4MU-01B","7:SEC61G:54755779:-:1:GLUL:182388750:-:fusion","SEC61G--GLUL","ENSG00000132432","ENSG00000135821",3.0,1.0,1.0,1.0,0.244,0.0232067510549]
["TCGA_LGG","TCGA-FG-A70Z-01A","17:GFAP:44908064:-:19:CIRBP:1270928:+:fusion","GFAP--CIRBP","ENSG00000131095","ENSG00000099622",2.0,1.0,1.0,1.0,0.521,0.0159453302961]
["TCGA_LGG","TCGA-HT-7470-01A","14:DLST:74889349:+:14:YLPM1:74818231:+:rev","DLST--YLPM1","ENSG00000119689","ENSG00000119596",1.0,3.0,3.0,2.0,0.966,"NA"]
["TCGA_LGG","TCGA-HT-7480-01A","20:DYNLRB1:34526343:+:20:RALY:34072066:+:rev","DYNLRB1--RALY","ENSG00000125971","ENSG00000125970",3.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_LGG","TCGA-HT-7686-01A","11:NTM:131911648:+:11:CCDC86:60847924:+:rev","NTM--CCDC86","ENSG00000182667","ENSG00000110104",3.0,1.0,1.0,1.0,0.843,0.0]
["TCGA_LGG","TCGA-HT-7690-01A","10:NRP1:33330708:-:10:CUL2:35010442:-:rev","NRP1--CUL2","ENSG00000099250","ENSG00000108094",3.0,1.0,1.0,1.0,0.553,0.0271084337349]
["TCGA_LGG","TCGA-HT-7873-01B","12:CCDC91:28259442:+:12:FAR2:29270412:+:reg","CCDC91--FAR2","ENSG00000123106","ENSG00000064763",28.0,1.0,1.0,1.0,0.727320279841403,0.0147928994083]
["TCGA_LGG","TCGA-HT-8104-01A","1:PLEKHA6:204359694:-:16:MT3:56590840:+:fusion","PLEKHA6--MT3","ENSG00000143850","ENSG00000087250",6.0,1.0,1.0,1.0,0.393,0.00641025641026]
["TCGA_LGG","TCGA-HT-A5RA-01A","3:ISY1:129156633:-:3:MASP1:187286056:-:rev","ISY1--MASP1","ENSG00000261796","ENSG00000127241",5.0,1.0,1.0,1.0,0.874,0.0]
["TCGA_LGG","TCGA-HT-A619-01A","3:USP4:49292510:-:11:BBOX1:27057201:+:fusion","USP4--BBOX1","ENSG00000114316","ENSG00000129151",5.0,1.0,1.0,1.0,0.226,0.0297297297297]
["TCGA_LGG","TCGA-HT-A74O-01A","6:TMEM14B:10770204:+:6:PAK1IP1:10707415:+:rev","TMEM14B--PAK1IP1","ENSG00000137210","ENSG00000111845",2.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_LGG","TCGA-HW-A5KM-01A","12:RASSF8:25995130:+:11:AC113192.2:33814967:-:fusion","RASSF8--AC113192.2","ENSG00000123094","ENSG00000255133",5.0,1.0,1.0,1.0,0.829,0.00513698630137]
["TCGA_LGG","TCGA-P5-A5EU-01A","19:AKT2:40285181:-:19:UPF1:18845980:+:strandcross","AKT2--UPF1","ENSG00000105221","ENSG00000005007",2.0,1.0,1.0,1.0,0.774,0.00955414012739]
["TCGA_LGG","TCGA-P5-A5EV-01A","17:MAPT:46018730:+:17:HOXB-AS3:48602075:+:reg","MAPT--HOXB-AS3","ENSG00000186868","ENSG00000233101",13.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_LGG","TCGA-QH-A6CS-01A","11:NCAM1:112961664:+:11:AP000462.1:115363629:+:reg","NCAM1--AP000462.1","ENSG00000149294","ENSG00000255580",7.0,1.0,1.0,1.0,0.329,0.0493827160494]
["TCGA_LGG","TCGA-QH-A6XC-01A","7:LANCL2:55391910:+:7:LINC01445:54347294:+:rev","LANCL2--LINC01445","ENSG00000132434","ENSG00000231427",1.0,1.0,1.0,1.0,0.791,0.0196721311475]
["TCGA_LGG","TCGA-S9-A6WE-01A","4:CPLX1:824492:-:4:GAK:851084:-:rev","CPLX1--GAK","ENSG00000168993","ENSG00000178950",4.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_LGG","TCGA-S9-A7IS-01A","4:ZCCHC4:25315400:+:4:LINC00504:14477458:-:strandcross","ZCCHC4--LINC00504","ENSG00000168228","ENSG00000248360",3.0,1.0,1.0,1.0,0.243,0.0294117647059]
["TCGA_LGG","TCGA-S9-A7R3-01A","19:ERCC2:45368930:-:12:C12orf40:39716756:+:fusion","ERCC2--C12orf40","ENSG00000104884","ENSG00000180116",3.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_LGG","TCGA-TM-A7CF-01A","19:AC011445.1:39318326:-:19:NPHS1:35868130:-:reg","AC011445.1--NPHS1","ENSG00000268262","ENSG00000161270",1.0,2.0,2.0,2.0,0.971,0.00925925925926]
["TCGA_LGG","TCGA-TM-A7CF-01A","19:SBNO2:1147309:-:19:CLEC4M:7765638:+:strandcross","SBNO2--CLEC4M","ENSG00000064932","ENSG00000104938",6.0,2.0,2.0,2.0,0.549,0.0416666666667]
["TCGA_LGG","TCGA-TM-A7CF-02A","19:AC011445.1:39318326:-:19:NPHS1:35868130:-:reg","AC011445.1--NPHS1","ENSG00000268262","ENSG00000161270",1.0,2.0,2.0,2.0,0.793,0.0077519379845]
["TCGA_LGG","TCGA-TM-A7CF-02A","6:VPS52:33263484:-:19:ZNF358:7519205:+:fusion","VPS52--ZNF358","ENSG00000223501","ENSG00000267952",36.0,2.0,2.0,2.0,0.937178457727343,0.0]
["TCGA_LGG","TCGA-TM-A84B-01A","19:ZSCAN5A:56363235:-:19:ZNF235:44289196:-:reg","ZSCAN5A--ZNF235","ENSG00000131848","ENSG00000159917",4.0,1.0,1.0,1.0,0.554,0.0214477211796]
["TCGA_LGG","TCGA-TM-A84H-01A","20:KCNB1:49481914:-:8:ZFPM2:105419144:+:fusion","KCNB1--ZFPM2","ENSG00000158445","ENSG00000169946",4.0,1.0,1.0,1.0,0.325,0.0327455919395]
["TCGA_LGG","TCGA-TM-A84I-01A","12:ST8SIA1:22249006:-:16:FTO:54111762:+:fusion","ST8SIA1--FTO","ENSG00000111728","ENSG00000140718",11.0,1.0,1.0,1.0,0.283,0.0557491289199]
["TCGA_LGG","TCGA-TM-A84I-01A","18:GALNT1:35654801:+:18:TAF4B:26357690:+:rev","GALNT1--TAF4B","ENSG00000141429","ENSG00000141384",38.0,1.0,1.0,1.0,0.810319576215637,0.0278745644599]
["TCGA_LGG","TCGA-TM-A84J-01A","1:LMNA:156130773:+:22:AC004832.1:30483128:+:fusion","LMNA--AC004832.1","ENSG00000160789","ENSG00000181123",57.0,1.0,1.0,1.0,0.906317825085472,0.00947867298578]
["TCGA_LGG","TCGA-TQ-A7RJ-01A","17:TAOK1:29510992:+:17:C17orf105:43783837:+:reg","TAOK1--C17orf105","ENSG00000160551","ENSG00000231256",7.0,1.0,1.0,1.0,0.536,0.032154340836]
["TCGA_LGG","TCGA-TQ-A7RJ-01A","17:TAOK1:29510992:+:17:C17orf105:43784383:+:reg","TAOK1--C17orf105","ENSG00000160551","ENSG00000231256",8.0,1.0,1.0,1.0,0.435,0.032154340836]
["TCGA_LGG","TCGA-TQ-A7RV-01A","10:MLLT10:21617207:+:10:WAC:28535562:+:reg","MLLT10--WAC","ENSG00000078403","ENSG00000095787",4.0,1.0,1.0,1.0,0.883,0.00352112676056]
["TCGA_LGG","TCGA-VM-A8CD-01A","5:SEC24A:134649173:+:11:KCNK7:65593874:-:fusion","SEC24A--KCNK7","ENSG00000113615","ENSG00000173338",76.0,1.0,1.0,1.0,0.876807030912047,0.0]
["TCGA_LIHC","TCGA-2V-A95S-01A","5:CSNK1A1:149525045:-:1:AL359541.1:161765501:-:fusion","CSNK1A1--AL359541.1","ENSG00000113712","ENSG00000226889",2.0,1.0,1.0,1.0,0.439,0.00238095238095]
["TCGA_LIHC","TCGA-2Y-A9H0-01A","11:TRIM29:120185250:-:11:PAK1:77323360:-:reg","TRIM29--PAK1","ENSG00000137699","ENSG00000149269",24.0,1.0,1.0,1.0,0.903091590484947,0.00359712230216]
["TCGA_LIHC","TCGA-2Y-A9H0-01A","6:PRPF4B:4021466:+:6:FAM50B:3849789:+:rev","PRPF4B--FAM50B","ENSG00000112739","ENSG00000145945",1.0,1.0,1.0,1.0,0.843,"NA"]
["TCGA_LIHC","TCGA-4R-AA8I-01A","6:BTBD9:38256409:-:6:CDC5L:44445655:+:strandcross","BTBD9--CDC5L","ENSG00000183826","ENSG00000096401",3.0,1.0,1.0,1.0,0.242,0.0416666666667]
["TCGA_LIHC","TCGA-BC-4072-01B","19:PKN1:14464153:+:2:ANXA4:69788054:+:fusion","PKN1--ANXA4","ENSG00000123143","ENSG00000196975",23.0,1.0,1.0,1.0,0.746341246921136,0.0021645021645]
["TCGA_LIHC","TCGA-BC-A10R-01A","9:ABL1:130714455:+:9:ASS1:130489333:+:rev","ABL1--ASS1","ENSG00000097007","ENSG00000130707",2.0,1.0,1.0,1.0,0.623,"NA"]
["TCGA_LIHC","TCGA-BC-A10T-01A","20:RALGAPA2:20629363:-:16:ACSM1:20685403:-:fusion","RALGAPA2--ACSM1","ENSG00000188559","ENSG00000166743",8.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_LIHC","TCGA-BC-A10T-01A","10:HOGA1:97584914:+:10:UBTD1:97570138:+:rev","HOGA1--UBTD1","ENSG00000241935","ENSG00000165886",4.0,1.0,1.0,1.0,0.76,"NA"]
["TCGA_LIHC","TCGA-BC-A10Y-01A","11:F2:46723518:+:8:FOXH1:144475261:-:fusion","F2--FOXH1","ENSG00000180210","ENSG00000160973",5.0,1.0,1.0,1.0,0.216,0.0164835164835]
["TCGA_LIHC","TCGA-BC-A10Y-01A","11:CAPN1:65186338:+:11:SPDYC:65172246:+:rev","CAPN1--SPDYC","ENSG00000014216","ENSG00000204710",6.0,1.0,1.0,1.0,0.819,"NA"]
["TCGA_LIHC","TCGA-BC-A10Z-01A","9:CNTLN:17143376:+:9:AL162725.2:17112273:+:rev","CNTLN--AL162725.2","ENSG00000044459","ENSG00000237153",6.0,1.0,1.0,1.0,0.559,"NA"]
["TCGA_LIHC","TCGA-BC-A217-01A","11:OAF:120211510:+:11:APOA5:116791067:-:strandcross","OAF--APOA5","ENSG00000184232","ENSG00000110243",15.0,1.0,1.0,1.0,0.682,0.00175131348511]
["TCGA_LIHC","TCGA-BC-A3KF-01A","12:YEATS4:69370975:+:12:LYZ:69350108:+:rev","YEATS4--LYZ","ENSG00000127337","ENSG00000090382",12.0,5.0,4.0,3.0,0.688,"NA"]
["TCGA_LIHC","TCGA-BC-A69H-01A","3:MAP4:48088773:-:6:GTF2H5:158191977:+:fusion","MAP4--GTF2H5","ENSG00000047849","ENSG00000272047",13.0,1.0,1.0,1.0,0.731,0.0056338028169]
["TCGA_LIHC","TCGA-BC-A8YO-01A","14:IRF9:24162280:+:14:RNF31:24159864:+:rev","IRF9--RNF31","ENSG00000213928","ENSG00000092098",3.0,1.0,1.0,1.0,0.724,"NA"]
["TCGA_LIHC","TCGA-CC-5258-01A","17:TRIM37:59070823:-:17:MSI2:57401379:+:strandcross","TRIM37--MSI2","ENSG00000108395","ENSG00000153944",2.0,1.0,1.0,1.0,0.679,0.010067114094]
["TCGA_LIHC","TCGA-CC-5263-01A","17:FAM222B:28834293:-:17:FLOT2:28885947:-:rev","FAM222B--FLOT2","ENSG00000173065","ENSG00000132589",21.0,1.0,1.0,1.0,0.585015874498976,"NA"]
["TCGA_LIHC","TCGA-CC-A123-01A","8:AC091114.1:125523013:+:8:NSMCE2:125182103:+:rev","AC091114.1--NSMCE2","ENSG00000253111","ENSG00000156831",2.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_LIHC","TCGA-CC-A7IJ-01A","10:HTR7:90857133:-:10:MMRN2:86945689:-:reg","HTR7--MMRN2","ENSG00000148680","ENSG00000173269",2.0,1.0,1.0,1.0,0.259,0.0111111111111]
["TCGA_LIHC","TCGA-CC-A8HV-01A","8:EIF3H:116726016:-:8:RAD21:116858458:-:rev","EIF3H--RAD21","ENSG00000147677","ENSG00000164754",1.0,1.0,1.0,1.0,0.894,"NA"]
["TCGA_LIHC","TCGA-DD-A115-01A","11:SLCO2B1:75159904:+:20:HNF4A:44406058:+:fusion","SLCO2B1--HNF4A","ENSG00000137491","ENSG00000101076",5.0,2.0,2.0,2.0,0.895,0.0]
["TCGA_LIHC","TCGA-DD-A115-01A","12:COQ10A:56269561:+:12:NABP2:56223584:+:rev","COQ10A--NABP2","ENSG00000135469","ENSG00000139579",2.0,2.0,2.0,2.0,0.966,"NA"]
["TCGA_LIHC","TCGA-DD-A11C-01A","14:TMED10:75176355:-:11:MRPL48:73859907:+:fusion","TMED10--MRPL48","ENSG00000170348","ENSG00000175581",7.0,1.0,1.0,1.0,0.778,0.0056338028169]
["TCGA_LIHC","TCGA-DD-A11D-01A","6:RARS2:87589922:-:6:IP6K3:33739261:-:reg","RARS2--IP6K3","ENSG00000146282","ENSG00000161896",2.0,1.0,1.0,1.0,0.956,0.00606060606061]
["TCGA_LIHC","TCGA-DD-A1EJ-01A","16:NKD1:50549555:+:16:LINC02181:87061058:+:reg","NKD1--LINC02181","ENSG00000140807","ENSG00000232190",4.0,1.0,1.0,1.0,0.868,0.00224719101124]
["TCGA_LIHC","TCGA-DD-A3A1-01A","11:NXF1:62798539:-:11:STX5:62807628:-:rev","NXF1--STX5","ENSG00000162231","ENSG00000162236",28.0,1.0,1.0,1.0,0.859771506062046,"NA"]
["TCGA_LIHC","TCGA-DD-A3A9-01A","11:KMT2A:118436944:+:11:ATP5L:118406937:+:rev","KMT2A--ATP5L","ENSG00000118058","ENSG00000167283",2.0,2.0,2.0,2.0,0.904,"NA"]
["TCGA_LIHC","TCGA-DD-A4NG-01A","3:SATB1:18394462:-:14:GOLGA5:92797408:+:fusion","SATB1--GOLGA5","ENSG00000182568","ENSG00000066455",9.0,1.0,1.0,1.0,0.848,0.00375939849624]
["TCGA_LIHC","TCGA-DD-A73C-01A","8:SLC7A2:17502302:+:5:TERT:1294666:-:fusion","SLC7A2--TERT","ENSG00000003989","ENSG00000164362",2.0,1.0,1.0,1.0,0.612,0.005859375]
["TCGA_LIHC","TCGA-DD-A73G-01A","3:SLC6A11:10844346:+:3:AC018495.1:10771379:+:rev","SLC6A11--AC018495.1","ENSG00000132164","ENSG00000230599",22.0,1.0,1.0,1.0,0.870957402636333,"NA"]
["TCGA_LIHC","TCGA-DD-AAD0-01A","11:AP2A2:977224:+:16:PKD1L3:71980134:-:fusion","AP2A2--PKD1L3","ENSG00000183020","ENSG00000277481",5.0,1.0,1.0,1.0,0.582,0.0111111111111]
["TCGA_LIHC","TCGA-DD-AADC-01A","3:LINC02028:194070822:-:3:CCDC39:180662007:-:reg","LINC02028--CCDC39","ENSG00000230102","ENSG00000145075",5.0,1.0,1.0,1.0,0.958,0.0]
["TCGA_LIHC","TCGA-DD-AADP-01A","11:SBF2:10193902:-:11:C11orf49:47052388:+:strandcross","SBF2--C11orf49","ENSG00000133812","ENSG00000149179",15.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_LIHC","TCGA-DD-AAE4-01A","22:SPECC1L-ADORA2A:24270983:+:14:RAD51B:68729808:+:fusion","SPECC1L-ADORA2A--RAD51B","ENSG00000100014","ENSG00000182185",19.0,1.0,1.0,1.0,0.930013248097718,0.0]
["TCGA_LIHC","TCGA-DD-AAVW-01A","15:POLG:89323404:-:15:CGNL1:57516780:+:strandcross","POLG--CGNL1","ENSG00000140521","ENSG00000128849",2.0,1.0,1.0,1.0,0.885,0.00689655172414]
["TCGA_LIHC","TCGA-ED-A4XI-01A","16:ADCY9:4113750:-:X:JADE3:46984884:+:fusion","ADCY9--JADE3","ENSG00000162104","ENSG00000102221",4.0,1.0,1.0,1.0,0.78,0.0025]
["TCGA_LIHC","TCGA-ED-A7XO-01A","14:MPP5:67241533:+:14:FAM71D:67203094:+:rev","MPP5--FAM71D","ENSG00000072415","ENSG00000172717",2.0,1.0,1.0,1.0,0.747,"NA"]
["TCGA_LIHC","TCGA-ED-A8O5-01A","3:RAF1:12663813:-:3:LINC02022:12877714:-:rev","RAF1--LINC02022","ENSG00000132155","ENSG00000232746",2.0,1.0,1.0,1.0,0.517,"NA"]
["TCGA_LIHC","TCGA-EP-A2KA-01A","3:ACAP2:195392090:-:3:DLG1:197051668:-:rev","ACAP2--DLG1","ENSG00000114331","ENSG00000075711",4.0,1.0,1.0,1.0,0.291,0.00990099009901]
["TCGA_LIHC","TCGA-ES-A2HS-01A","10:CYP2E1:133527572:+:21:FTCD:46138923:-:fusion","CYP2E1--FTCD","ENSG00000130649","ENSG00000160282",3.0,1.0,1.0,1.0,0.779,0.0]
["TCGA_LIHC","TCGA-FV-A495-01A","19:TBC1D17:49878572:+:19:FCGRT:49524507:+:rev","TBC1D17--FCGRT","ENSG00000104946","ENSG00000104870",2.0,1.0,1.0,1.0,0.843,"NA"]
["TCGA_LIHC","TCGA-G3-A3CG-01A","11:CWF19L2:107416209:-:11:SLN:107708005:-:rev","CWF19L2--SLN","ENSG00000152404","ENSG00000170290",2.0,2.0,1.0,1.0,0.828,"NA"]
["TCGA_LIHC","TCGA-G3-A3CG-01A","16:BCAR1:75265825:-:16:CFDP1:75305182:-:rev","BCAR1--CFDP1","ENSG00000050820","ENSG00000153774",2.0,1.0,2.0,1.0,0.981,"NA"]
["TCGA_LIHC","TCGA-G3-A7M7-01A","2:RPL31:101006071:+:2:NPAS2:100995400:+:rev","RPL31--NPAS2","ENSG00000071082","ENSG00000170485",4.0,1.0,1.0,1.0,0.652,"NA"]
["TCGA_LIHC","TCGA-GJ-A6C0-01A","17:RAB11FIP4:31488272:+:17:NF1:31374013:+:rev","RAB11FIP4--NF1","ENSG00000131242","ENSG00000196712",6.0,1.0,1.0,1.0,0.919,"NA"]
["TCGA_LIHC","TCGA-KR-A7K8-01A","11:RAB6A:73760566:-:11:GDPD5:75490320:-:rev","RAB6A--GDPD5","ENSG00000175582","ENSG00000158555",7.0,1.0,1.0,1.0,0.973,0.0]
["TCGA_LIHC","TCGA-LG-A9QC-01A","16:PPL:4888978:-:22:APOL3:36142058:-:fusion","PPL--APOL3","ENSG00000118898","ENSG00000128284",2.0,1.0,1.0,1.0,0.891,0.0]
["TCGA_LIHC","TCGA-NI-A8LF-01A","15:AKAP13:85380798:+:15:PDE8A:85064370:+:rev","AKAP13--PDE8A","ENSG00000170776","ENSG00000073417",4.0,2.0,3.0,1.0,0.927,"NA"]
["TCGA_LIHC","TCGA-PD-A5DF-01A","1:LDLRAD1:54017376:-:1:TMEM59:54032305:-:rev","LDLRAD1--TMEM59","ENSG00000203985","ENSG00000116209",1.0,1.0,1.0,1.0,0.909,"NA"]
["TCGA_LIHC","TCGA-RC-A6M4-01A","10:HABP2:113553190:+:8:LAPTM4B:97805353:+:fusion","HABP2--LAPTM4B","ENSG00000148702","ENSG00000104341",141.0,1.0,1.0,1.0,0.95864522016979,0.0]
["TCGA_LIHC","TCGA-UB-A7MA-01A","12:AC073896.1:56314851:-:12:LINC02388:58569159:-:rev","AC073896.1--LINC02388","ENSG00000144785","ENSG00000257259",3.0,1.0,1.0,1.0,0.674,0.00355871886121]
["TCGA_LIHC","TCGA-UB-A7ME-01A","16:PARN:14599904:-:11:WT1-AS:32452021:+:fusion","PARN--WT1-AS","ENSG00000140694","ENSG00000183242",5.0,1.0,1.0,1.0,0.693,0.00772200772201]
["TCGA_LIHC","TCGA-XR-A8TG-01A","2:EPAS1:46297937:+:1:SYPL2:109467059:+:fusion","EPAS1--SYPL2","ENSG00000116016","ENSG00000143028",3.0,1.0,1.0,1.0,0.782,0.00456621004566]
["TCGA_LIHC","TCGA-XR-A8TG-01A","3:FLNB:58008856:+:3:SLMAP:57927296:+:rev","FLNB--SLMAP","ENSG00000136068","ENSG00000163681",2.0,1.0,1.0,1.0,0.415,"NA"]
["TCGA_LIHC","TCGA-ZS-A9CD-01A","17:PHF23:7239246:-:22:TOM1:35345725:+:fusion","PHF23--TOM1","ENSG00000040633","ENSG00000100284",9.0,1.0,1.0,1.0,0.684,0.003003003003]
["TCGA_LIHC","TCGA-ZS-A9CF-01A","5:SLC12A7:1111868:-:5:TERT:1282624:-:rev","SLC12A7--TERT","ENSG00000113504","ENSG00000164362",3.0,3.0,1.0,1.0,0.952,"NA"]
["TCGA_LIHC","TCGA-ZS-A9CF-02A","10:CYP2C18:94706960:+:10:HELLS:94571388:+:rev","CYP2C18--HELLS","ENSG00000108242","ENSG00000119969",8.0,2.0,2.0,2.0,0.926,"NA"]
["TCGA_LUAD","TCGA-05-4382-01A","19:EPS15L1:16436937:-:19:LINC01801:34818766:-:rev","EPS15L1--LINC01801","ENSG00000127527","ENSG00000267767",4.0,1.0,1.0,1.0,0.862,0.00120481927711]
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["TCGA_LUAD","TCGA-44-2657-01A","10:FGFR2:121593709:-:10:ATE1:121841263:-:rev","FGFR2--ATE1","ENSG00000066468","ENSG00000107669",1.0,1.0,1.0,1.0,0.914,"NA"]
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["TCGA_LUAD","TCGA-44-3918-01A","12:AC010197.1:21662771:+:12:ANO6:45401795:+:reg","AC010197.1--ANO6","ENSG00000256615","ENSG00000177119",2.0,1.0,1.0,1.0,0.857,0.00427960057061]
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["TCGA_LUAD","TCGA-44-5645-01A","11:MICALCL:12327266:+:11:MRVI1-AS1:10594117:+:rev","MICALCL--MRVI1-AS1","ENSG00000133808","ENSG00000177112",3.0,2.0,1.0,1.0,0.888,0.00434782608696]
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["TCGA_LUAD","TCGA-44-7667-01A","16:ANKRD11:89490245:-:18:TGIF1:3456354:+:fusion","ANKRD11--TGIF1","ENSG00000167522","ENSG00000177426",12.0,1.0,1.0,1.0,0.821,0.00647249190939]
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["TCGA_LUAD","TCGA-55-7911-01A","17:MMP28:35778888:-:17:KCNJ18:21695983:+:strandcross","MMP28--KCNJ18","ENSG00000271447","ENSG00000260458",6.0,1.0,1.0,1.0,0.287,0.0150602409639]
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["TCGA_LUAD","TCGA-55-8620-01A","13:ATP11A:112862575:+:7:CAPZA2:116904177:+:fusion","ATP11A--CAPZA2","ENSG00000068650","ENSG00000198898",23.0,1.0,1.0,1.0,0.884096517297203,0.00600600600601]
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["TCGA_LUAD","TCGA-55-A493-01A","16:TMC5:19430640:+:17:JPT1:75148671:-:fusion","TMC5--JPT1","ENSG00000103534","ENSG00000189159",49.0,1.0,1.0,1.0,0.863033078338084,0.00487804878049]
["TCGA_LUAD","TCGA-62-8394-01A","22:CELSR1:46463707:-:1:CD52:26320171:+:fusion","CELSR1--CD52","ENSG00000075275","ENSG00000169442",137.0,1.0,1.0,1.0,0.990290911146681,0.0]
["TCGA_LUAD","TCGA-62-A46U-01A","17:MSI2:57258354:+:17:NPEPPS:47590717:+:rev","MSI2--NPEPPS","ENSG00000153944","ENSG00000141279",8.0,1.0,1.0,1.0,0.47,0.0121951219512]
["TCGA_LUAD","TCGA-64-1678-01A","22:TRIOBP:37768176:+:15:UNC13C:54622327:+:fusion","TRIOBP--UNC13C","ENSG00000100106","ENSG00000137766",5.0,1.0,1.0,1.0,0.739,0.0160642570281]
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["TCGA_LUAD","TCGA-69-7765-01A","17:PTRH2:59707371:-:17:VMP1:59811670:+:strandcross","PTRH2--VMP1","ENSG00000141378","ENSG00000062716",3.0,3.0,1.0,1.0,0.899,0.0]
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["TCGA_LUAD","TCGA-69-7979-01A","13:DOCK9:98880547:-:13:SPACA7:112432444:+:strandcross","DOCK9--SPACA7","ENSG00000088387","ENSG00000153498",68.0,1.0,1.0,1.0,0.978616791341154,0.0]
["TCGA_LUAD","TCGA-69-7980-01A","7:RNF216:5641154:-:7:JAZF1:27991981:-:rev","RNF216--JAZF1","ENSG00000011275","ENSG00000153814",5.0,1.0,1.0,1.0,0.876,0.0041067761807]
["TCGA_LUAD","TCGA-69-A59K-01A","17:SPOP:49636759:-:19:GPATCH1:33119010:+:fusion","SPOP--GPATCH1","ENSG00000121067","ENSG00000076650",5.0,1.0,1.0,1.0,0.453,0.00728155339806]
["TCGA_LUAD","TCGA-73-4658-01A","11:PNPLA2:818958:+:11:RPLP2:810234:+:rev","PNPLA2--RPLP2","ENSG00000177666","ENSG00000177600",18.0,1.0,1.0,1.0,0.864629469361422,"NA"]
["TCGA_LUAD","TCGA-73-4659-01A","3:DCP1A:53338091:-:8:LINC00681:12817963:+:fusion","DCP1A--LINC00681","ENSG00000272886","ENSG00000255494",4.0,1.0,1.0,1.0,0.908,0.0]
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["TCGA_LUAD","TCGA-75-5147-01A","11:SWAP70:9664278:+:11:ZNF143:9501091:+:rev","SWAP70--ZNF143","ENSG00000133789","ENSG00000166478",3.0,1.0,1.0,1.0,0.762,"NA"]
["TCGA_LUAD","TCGA-75-6211-01A","13:POLR1D:27648453:+:13:GTF3A:27429870:+:rev","POLR1D--GTF3A","ENSG00000186184","ENSG00000122034",1.0,1.0,1.0,1.0,0.851,"NA"]
["TCGA_LUAD","TCGA-75-7031-01A","22:TYMP:50529904:-:22:PPP6R2:50372020:+:strandcross","TYMP--PPP6R2","ENSG00000025708","ENSG00000100239",10.0,1.0,1.0,1.0,0.235,0.0094696969697]
["TCGA_LUAD","TCGA-78-7146-01A","1:NOS1AP:162343976:+:1:F5:169515626:-:strandcross","NOS1AP--F5","ENSG00000198929","ENSG00000198734",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_LUAD","TCGA-78-7149-01A","6:C6orf48:31837435:+:2:SFTPB:85667177:-:fusion","C6orf48--SFTPB","ENSG00000204387","ENSG00000168878",2.0,1.0,1.0,1.0,0.86,0.0]
["TCGA_LUAD","TCGA-78-7154-01A","21:LINC02246:14857542:-:21:AP000473.1:16640230:+:strandcross","LINC02246--AP000473.1","ENSG00000235609","ENSG00000228798",4.0,1.0,1.0,1.0,0.501,0.00635930047695]
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["TCGA_LUAD","TCGA-78-7161-01A","18:TWSG1:9360071:+:18:MYL12A:3253233:+:rev","TWSG1--MYL12A","ENSG00000128791","ENSG00000101608",5.0,1.0,1.0,1.0,0.217,0.0222222222222]
["TCGA_LUAD","TCGA-78-7536-01A","12:ZNF268:133182030:+:2:ASB1:238444342:+:fusion","ZNF268--ASB1","ENSG00000256825","ENSG00000065802",1.0,1.0,1.0,1.0,0.877,0.00405679513185]
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["TCGA_LUAD","TCGA-78-8660-01A","20:RALY:33994131:+:20:DEFB123:31450029:+:rev","RALY--DEFB123","ENSG00000125970","ENSG00000180424",8.0,1.0,1.0,1.0,0.183,0.0303951367781]
["TCGA_LUAD","TCGA-80-5611-01A","4:FHDC1:152954319:+:4:ARFIP1:152910064:+:rev","FHDC1--ARFIP1","ENSG00000137460","ENSG00000164144",21.0,1.0,1.0,1.0,0.86470677924859,"NA"]
["TCGA_LUAD","TCGA-86-7711-01A","1:RAP1GAP:21608850:-:1:USP48:21695221:-:rev","RAP1GAP--USP48","ENSG00000076864","ENSG00000090686",2.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_LUAD","TCGA-86-7954-01A","12:METTL1:57771094:-:12:BCDIN3D-AS1:49828935:+:strandcross","METTL1--BCDIN3D-AS1","ENSG00000037897","ENSG00000258057",4.0,1.0,1.0,1.0,0.844,0.00201612903226]
["TCGA_LUAD","TCGA-86-7955-01A","13:ANKRD10:110893028:-:13:MYO16:109120370:+:strandcross","ANKRD10--MYO16","ENSG00000088448","ENSG00000041515",8.0,1.0,1.0,1.0,0.907,0.00310559006211]
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["TCGA_LUAD","TCGA-86-8074-01A","19:DMWD:45790905:-:19:SYMPK:45854507:-:rev","DMWD--SYMPK","ENSG00000185800","ENSG00000125755",2.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_LUAD","TCGA-86-8278-01A","6:ROS1:117379059:-:5:CD74:150403312:-:fusion","ROS1--CD74","ENSG00000047936","ENSG00000019582",17.0,1.0,1.0,1.0,0.829462687919866,0.00585651537335]
["TCGA_LUAD","TCGA-86-8358-01A","8:INTS9:28889874:-:8:KIF13B:29072316:-:rev","INTS9--KIF13B","ENSG00000104299","ENSG00000197892",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_LUAD","TCGA-86-8673-01A","1:ALDH9A1:165682107:-:1:NME7:169237687:-:rev","ALDH9A1--NME7","ENSG00000143149","ENSG00000143156",11.0,1.0,1.0,1.0,0.655,0.0107913669065]
["TCGA_LUAD","TCGA-86-A4D0-01A","1:ZBTB8OS:32650402:-:1:YARS:32776091:-:rev","ZBTB8OS--YARS","ENSG00000176261","ENSG00000134684",2.0,1.0,1.0,1.0,0.864,"NA"]
["TCGA_LUAD","TCGA-91-6831-01A","19:CIRBP:1269410:+:19:WDR18:994020:+:rev","CIRBP--WDR18","ENSG00000099622","ENSG00000065268",2.0,1.0,1.0,1.0,0.682,"NA"]
["TCGA_LUAD","TCGA-91-6847-01A","17:TAOK1:29510992:+:17:BCAS3:60808004:+:reg","TAOK1--BCAS3","ENSG00000160551","ENSG00000141376",8.0,1.0,1.0,1.0,0.474,0.00294117647059]
["TCGA_LUAD","TCGA-91-7771-01A","8:ARMC1:65613244:-:8:SPAG11B:7451199:-:reg","ARMC1--SPAG11B","ENSG00000104442","ENSG00000164871",26.0,1.0,1.0,1.0,0.570808467184441,0.0]
["TCGA_LUAD","TCGA-91-8499-01A","2:LINC00607:215743814:-:2:MREG:215945734:-:rev","LINC00607--MREG","ENSG00000235770","ENSG00000118242",4.0,1.0,1.0,1.0,0.698,"NA"]
["TCGA_LUAD","TCGA-93-8067-01A","1:ZMYM4:35390098:+:19:SSBP4:18427351:+:fusion","ZMYM4--SSBP4","ENSG00000146463","ENSG00000130511",9.0,1.0,1.0,1.0,0.528,0.0145228215768]
["TCGA_LUAD","TCGA-93-A4JQ-01A","3:DLG1:197194425:-:8:LINC00535:93683431:-:fusion","DLG1--LINC00535","ENSG00000075711","ENSG00000246662",4.0,1.0,1.0,1.0,0.359,0.00792079207921]
["TCGA_LUAD","TCGA-95-7567-01A","8:INTS8:94823561:+:22:LINC01644:47463572:-:fusion","INTS8--LINC01644","ENSG00000164941","ENSG00000218357",1.0,1.0,1.0,1.0,0.626,0.00931098696462]
["TCGA_LUAD","TCGA-95-8039-01A","2:SFTPB:85665289:-:7:AC004922.1:99392671:+:fusion","SFTPB--AC004922.1","ENSG00000168878","ENSG00000284292",2.0,1.0,2.0,1.0,0.702,9.56022944551E-4]
["TCGA_LUAD","TCGA-97-7554-01A","X:MAMLD1:150363530:+:X:AL589669.1:147269009:+:rev","MAMLD1--AL589669.1","ENSG00000013619","ENSG00000284377",5.0,1.0,1.0,1.0,0.476,0.00716332378223]
["TCGA_LUAD","TCGA-97-8175-01A","16:ITFG1:47460838:-:19:AC008555.3:34903083:-:fusion","ITFG1--AC008555.3","ENSG00000129636","ENSG00000270544",2.0,1.0,1.0,1.0,0.763,0.00608519269777]
["TCGA_LUAD","TCGA-97-8179-01A","4:EXOC1:55902538:+:8:IDO1:39922552:+:fusion","EXOC1--IDO1","ENSG00000090989","ENSG00000131203",5.0,1.0,1.0,1.0,0.287,0.0267175572519]
["TCGA_LUAD","TCGA-97-A4M3-01A","11:FAT3:92355404:+:11:DPP3:66509079:+:rev","FAT3--DPP3","ENSG00000165323","ENSG00000254986",25.0,1.0,1.0,1.0,0.232152292133277,0.0153256704981]
["TCGA_LUAD","TCGA-99-8028-01A","2:FAP:162217986:-:2:IFIH1:162273944:-:rev","FAP--IFIH1","ENSG00000078098","ENSG00000115267",148.0,2.0,2.0,1.0,0.997227399074369,"NA"]
["TCGA_LUAD","TCGA-J2-A4AG-01A","2:AGPS:177468524:+:2:NCKAP5:132963869:-:strandcross","AGPS--NCKAP5","ENSG00000018510","ENSG00000176771",3.0,1.0,1.0,1.0,0.272,0.00581395348837]
["TCGA_LUAD","TCGA-L9-A8F4-01A","3:TBC1D5:17428450:-:3:SETD5:9435728:+:strandcross","TBC1D5--SETD5","ENSG00000131374","ENSG00000168137",4.0,1.0,1.0,1.0,0.766,0.00452488687783]
["TCGA_LUAD","TCGA-MP-A4SV-01A","12:HEBP1:13000037:-:12:CREBL2:12635777:+:strandcross","HEBP1--CREBL2","ENSG00000013583","ENSG00000111269",8.0,1.0,1.0,1.0,0.577,0.00257731958763]
["TCGA_LUAD","TCGA-MP-A4T8-01A","6:AHI1:135490623:-:6:BCLAF1:136261477:-:rev","AHI1--BCLAF1","ENSG00000135541","ENSG00000029363",2.0,1.0,1.0,1.0,0.86,"NA"]
["TCGA_LUAD","TCGA-MP-A4TK-01A","22:CCDC117:28773778:+:9:OSTF1:75146683:+:fusion","CCDC117--OSTF1","ENSG00000159873","ENSG00000134996",6.0,1.0,1.0,1.0,0.534,0.0189189189189]
["TCGA_LUAD","TCGA-NJ-A4YF-01A","9:BRINP1:119213919:-:9:TMEM38B:105773865:+:strandcross","BRINP1--TMEM38B","ENSG00000078725","ENSG00000095209",2.0,1.0,1.0,1.0,0.868,0.0]
["TCGA_LUAD","TCGA-NJ-A4YP-01A","6:RPL10A:35468439:+:2:AUP1:74528006:-:fusion","RPL10A--AUP1","ENSG00000198755","ENSG00000115307",3.0,1.0,1.0,1.0,0.218,0.0116199589884]
["TCGA_LUAD","TCGA-O1-A52J-01A","21:ITSN1:33642713:+:10:NEBL:20850502:-:fusion","ITSN1--NEBL","ENSG00000205726","ENSG00000078114",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_LUAD","TCGA-O1-A52J-01A","21:RUNX1:34834410:-:18:CEP76:12686450:-:fusion","RUNX1--CEP76","ENSG00000159216","ENSG00000101624",11.0,1.0,1.0,1.0,0.714,0.0049504950495]
["TCGA_LUSC","TCGA-18-3415-01A","2:NFE2L2:177263403:-:13:ZC3H13:45980004:-:fusion","NFE2L2--ZC3H13","ENSG00000116044","ENSG00000123200",176.0,1.0,1.0,1.0,0.997460264147141,0.0]
["TCGA_LUSC","TCGA-18-3421-01A","8:CPQ:96645402:+:8:COL14A1:120367171:+:reg","CPQ--COL14A1","ENSG00000104324","ENSG00000187955",3.0,1.0,1.0,1.0,0.834,0.0]
["TCGA_LUSC","TCGA-21-1070-01A","15:ABHD17C:80696019:+:2:AC092164.1:28723006:-:fusion","ABHD17C--AC092164.1","ENSG00000136379","ENSG00000226833",12.0,1.0,1.0,1.0,0.973,0.002]
["TCGA_LUSC","TCGA-21-1076-01A","8:ADAM9:39007983:+:8:RNF170:42861855:-:strandcross","ADAM9--RNF170","ENSG00000168615","ENSG00000120925",34.0,2.0,1.0,1.0,0.742111727634455,0.0070796460177]
["TCGA_LUSC","TCGA-21-1081-01A","8:SCRIB:143813311:-:8:MROH1:144260677:+:strandcross","SCRIB--MROH1","ENSG00000180900","ENSG00000179832",2.0,1.0,1.0,1.0,0.823,0.00135685210312]
["TCGA_LUSC","TCGA-21-5783-01A","8:SAMD12:118580715:-:8:TG:132913047:+:strandcross","SAMD12--TG","ENSG00000177570","ENSG00000042832",3.0,1.0,1.0,1.0,0.777,0.00252525252525]
["TCGA_LUSC","TCGA-22-0944-01A","17:FBXL20:39401361:-:17:ORMDL3:39924225:-:rev","FBXL20--ORMDL3","ENSG00000108306","ENSG00000172057",35.0,1.0,1.0,1.0,0.958909973882487,"NA"]
["TCGA_LUSC","TCGA-22-4593-01A","14:ITPK1:93115069:-:14:CEP170B:104876256:+:strandcross","ITPK1--CEP170B","ENSG00000100605","ENSG00000099814",2.0,1.0,1.0,1.0,0.196,0.012278308322]
["TCGA_LUSC","TCGA-22-4595-01A","1:SPSB1:9293071:+:1:H6PD:9262059:+:rev","SPSB1--H6PD","ENSG00000171621","ENSG00000049239",5.0,9.0,9.0,6.0,0.813,"NA"]
["TCGA_LUSC","TCGA-22-4607-01A","4:FGFR3:1806934:+:4:TACC3:1735273:+:rev","FGFR3--TACC3","ENSG00000068078","ENSG00000013810",10.0,1.0,1.0,1.0,0.895,"NA"]
["TCGA_LUSC","TCGA-22-5477-01A","3:ITPR1:4494506:+:3:SUMF1:4068745:-:strandcross","ITPR1--SUMF1","ENSG00000150995","ENSG00000144455",3.0,1.0,1.0,1.0,0.907,0.0]
["TCGA_LUSC","TCGA-22-5481-01A","7:TNRC18:5370375:-:7:ACTB:5529663:-:rev","TNRC18--ACTB","ENSG00000182095","ENSG00000075624",9.0,1.0,1.0,1.0,0.94,"NA"]
["TCGA_LUSC","TCGA-22-5491-01A","10:TCF7L2:113040126:+:10:AL355512.1:110475226:-:strandcross","TCF7L2--AL355512.1","ENSG00000148737","ENSG00000273143",5.0,1.0,1.0,1.0,0.371,0.0122199592668]
["TCGA_LUSC","TCGA-22-A5C4-01A","20:MKKS:10434108:-:20:MMP24:35246840:+:strandcross","MKKS--MMP24","ENSG00000125863","ENSG00000125966",8.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_LUSC","TCGA-22-A5C4-01A","X:CXorf23:19914152:-:X:POLA1:24809898:+:strandcross","CXorf23--POLA1","ENSG00000173681","ENSG00000101868",2.0,1.0,1.0,1.0,0.729,0.00401606425703]
["TCGA_LUSC","TCGA-33-4547-01A","19:U2AF2:55669692:+:19:NLRP9:55709044:-:strandcross","U2AF2--NLRP9","ENSG00000063244","ENSG00000185792",159.0,1.0,1.0,1.0,0.979898799965431,0.0]
["TCGA_LUSC","TCGA-33-4586-01A","17:PTRH2:59707371:-:17:RNFT1:59958444:-:rev","PTRH2--RNFT1","ENSG00000141378","ENSG00000189050",36.0,1.0,1.0,1.0,0.780986705424614,"NA"]
["TCGA_LUSC","TCGA-33-4589-01A","9:B4GALT1:33166758:-:9:BAG1:33259033:-:rev","B4GALT1--BAG1","ENSG00000086062","ENSG00000107262",2.0,2.0,1.0,1.0,0.938,"NA"]
["TCGA_LUSC","TCGA-33-6738-01A","18:ZNF532:58865579:+:18:NEDD4L:58165788:+:rev","ZNF532--NEDD4L","ENSG00000074657","ENSG00000049759",2.0,1.0,2.0,1.0,0.998,"NA"]
["TCGA_LUSC","TCGA-33-AASJ-01A","8:SAMD12:118379560:-:8:CASC8:127290060:-:rev","SAMD12--CASC8","ENSG00000177570","ENSG00000246228",18.0,1.0,1.0,1.0,0.864227167102948,0.00136612021858]
["TCGA_LUSC","TCGA-34-5232-01A","12:NOC4L:132148895:+:12:STAB2:103748963:+:rev","NOC4L--STAB2","ENSG00000184967","ENSG00000136011",8.0,1.0,1.0,1.0,0.943,0.00130039011704]
["TCGA_LUSC","TCGA-34-5241-01A","12:ARID2:45731314:+:12:PPHLN1:42441315:+:rev","ARID2--PPHLN1","ENSG00000189079","ENSG00000134283",3.0,1.0,1.0,1.0,0.958,0.0020202020202]
["TCGA_LUSC","TCGA-34-7107-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",13.0,23.0,20.0,15.0,0.757,"NA"]
["TCGA_LUSC","TCGA-37-3783-01A","14:NEMF:49840718:-:14:LINC01588:49992873:-:rev","NEMF--LINC01588","ENSG00000165525","ENSG00000214900",25.0,1.0,1.0,1.0,0.895480885571642,"NA"]
["TCGA_LUSC","TCGA-37-3792-01A","21:MORC3:36372531:+:21:FAM3B:41338378:+:reg","MORC3--FAM3B","ENSG00000159256","ENSG00000183844",2.0,1.0,1.0,1.0,0.831,0.00674157303371]
["TCGA_LUSC","TCGA-37-4141-01A","18:SNHG22:49814062:+:20:SNRPB:2462761:-:fusion","SNHG22--SNRPB","ENSG00000267322","ENSG00000125835",1.0,1.0,1.0,1.0,0.958,0.0]
["TCGA_LUSC","TCGA-37-A5EM-01A","6:KIF13A:17987054:-:6:F13A1:6197326:-:reg","KIF13A--F13A1","ENSG00000137177","ENSG00000124491",132.0,1.0,1.0,1.0,0.454475220242888,0.0041067761807]
["TCGA_LUSC","TCGA-39-5019-01A","18:AC090912.1:22920762:-:7:VWC2:49912034:+:fusion","AC090912.1--VWC2","ENSG00000265943","ENSG00000188730",4.0,1.0,1.0,1.0,0.92,0.0]
["TCGA_LUSC","TCGA-39-5028-01A","2:PSME4:53919151:-:2:LINC01122:59003949:+:strandcross","PSME4--LINC01122","ENSG00000068878","ENSG00000233723",59.0,1.0,1.0,1.0,0.92240752614962,0.00176991150442]
["TCGA_LUSC","TCGA-39-5034-01A","14:SFTA3:36513112:-:14:SLC25A21:36683880:-:rev","SFTA3--SLC25A21","ENSG00000229415","ENSG00000183032",3.0,1.0,1.0,1.0,0.424,"NA"]
["TCGA_LUSC","TCGA-39-5035-01A","11:LAMTOR1:72098289:-:11:AP000812.1:72163379:-:rev","LAMTOR1--AP000812.1","ENSG00000149357","ENSG00000204971",16.0,1.0,1.0,1.0,0.90159953871115,"NA"]
["TCGA_LUSC","TCGA-43-2581-01A","17:NMT1:45061460:+:17:NME1:51155651:+:reg","NMT1--NME1","ENSG00000136448","ENSG00000239672",17.0,1.0,1.0,1.0,0.455594294374783,0.00980392156863]
["TCGA_LUSC","TCGA-43-3920-01A","20:DIDO1:62937796:-:X:RPS4X:72275724:-:fusion","DIDO1--RPS4X","ENSG00000101191","ENSG00000198034",80.0,1.0,1.0,1.0,0.266009729356749,0.0221606648199]
["TCGA_LUSC","TCGA-43-5670-01A","22:FBLN1:45550615:+:19:PAK4:39168230:+:fusion","FBLN1--PAK4","ENSG00000077942","ENSG00000130669",2.0,1.0,1.0,1.0,0.783,0.00740740740741]
["TCGA_LUSC","TCGA-43-6143-01A","6:E2F3:20403832:+:6:AL158198.1:20317551:+:rev","E2F3--AL158198.1","ENSG00000112242","ENSG00000227803",2.0,1.0,1.0,1.0,0.963,"NA"]
["TCGA_LUSC","TCGA-43-6771-01A","11:PPFIA1:70343892:+:11:ALDH3B1:68027749:+:rev","PPFIA1--ALDH3B1","ENSG00000131626","ENSG00000006534",59.0,1.0,1.0,1.0,0.861343192733641,0.00249066002491]
["TCGA_LUSC","TCGA-43-7658-01A","4:ART3:76075958:+:7:SLC25A13:96146696:-:fusion","ART3--SLC25A13","ENSG00000156219","ENSG00000004864",32.0,1.0,1.0,1.0,0.648181429518929,0.00267379679144]
["TCGA_LUSC","TCGA-43-8116-01A","8:PVT1:127796008:+:8:TRIB1:125436006:+:rev","PVT1--TRIB1","ENSG00000249859","ENSG00000173334",46.0,1.0,1.0,1.0,0.971033163813205,0.00228832951945]
["TCGA_LUSC","TCGA-46-3765-01A","1:MTF2:93079531:+:5:CTNND2:11199661:-:fusion","MTF2--CTNND2","ENSG00000143033","ENSG00000169862",12.0,1.0,1.0,1.0,0.435,0.018018018018]
["TCGA_LUSC","TCGA-46-3769-01A","6:FOXP4:41584891:+:6:CCND3:41937394:-:strandcross","FOXP4--CCND3","ENSG00000137166","ENSG00000112576",8.0,1.0,1.0,1.0,0.378,0.0124481327801]
["TCGA_LUSC","TCGA-46-6025-01A","7:RAPGEF5:22230846:-:3:MRPS22:139346878:+:fusion","RAPGEF5--MRPS22","ENSG00000136237","ENSG00000175110",3.0,1.0,1.0,1.0,0.787,0.00296735905045]
["TCGA_LUSC","TCGA-51-4081-01A","6:GCLC:53520778:-:6:HCRTR2:55174211:+:strandcross","GCLC--HCRTR2","ENSG00000001084","ENSG00000137252",5.0,1.0,1.0,1.0,0.662,0.0138888888889]
["TCGA_LUSC","TCGA-52-7809-01A","13:RB1:48381443:+:19:GADD45GIP1:12954526:-:fusion","RB1--GADD45GIP1","ENSG00000139687","ENSG00000179271",13.0,1.0,1.0,1.0,0.919,0.00696864111498]
["TCGA_LUSC","TCGA-52-7812-01A","20:DSTN:17570211:+:1:ARPC5:183630637:-:fusion","DSTN--ARPC5","ENSG00000125868","ENSG00000162704",23.0,1.0,1.0,1.0,0.885513519195973,0.00547945205479]
["TCGA_LUSC","TCGA-52-7812-01A","3:ATP2C1:130930526:+:3:COL6A6:130675202:+:rev","ATP2C1--COL6A6","ENSG00000017260","ENSG00000206384",15.0,1.0,1.0,1.0,0.662,"NA"]
["TCGA_LUSC","TCGA-56-5898-01A","3:B3GNT5:183253472:+:3:CAMK2N2:184260227:-:strandcross","B3GNT5--CAMK2N2","ENSG00000176597","ENSG00000163888",16.0,1.0,1.0,1.0,0.806135762877982,0.00187969924812]
["TCGA_LUSC","TCGA-56-6545-01A","5:PJA2:109409842:-:5:ADGRV1:91163782:+:strandcross","PJA2--ADGRV1","ENSG00000198961","ENSG00000164199",11.0,1.0,1.0,1.0,0.861,0.00689655172414]
["TCGA_LUSC","TCGA-56-7223-01A","3:PPP1R2:195529794:-:3:CLDN1:190313036:-:reg","PPP1R2--CLDN1","ENSG00000184203","ENSG00000163347",9.0,1.0,1.0,1.0,0.229,0.0277777777778]
["TCGA_LUSC","TCGA-56-7730-01A","1:CTNNBIP1:9910095:-:1:UBE4B:10178644:+:strandcross","CTNNBIP1--UBE4B","ENSG00000178585","ENSG00000130939",52.0,1.0,1.0,1.0,0.969848539612755,0.00182481751825]
["TCGA_LUSC","TCGA-56-7823-01B","13:TFDP1:113585849:+:13:ATP11A:112785135:+:rev","TFDP1--ATP11A","ENSG00000198176","ENSG00000068650",8.0,1.0,1.0,1.0,0.596,"NA"]
["TCGA_LUSC","TCGA-56-8307-01A","X:CLCN4:10158551:+:6:TFAP2A:10393561:-:fusion","CLCN4--TFAP2A","ENSG00000073464","ENSG00000137203",36.0,1.0,1.0,1.0,0.943328687159896,0.0]
["TCGA_LUSC","TCGA-56-8629-01A","16:RNF40:30763559:+:16:IL21R:27430056:+:rev","RNF40--IL21R","ENSG00000103549","ENSG00000103522",3.0,1.0,1.0,1.0,0.891,0.0]
["TCGA_LUSC","TCGA-56-A4BX-01A","3:VPS8:185024389:+:3:NLGN1:173604279:+:rev","VPS8--NLGN1","ENSG00000156931","ENSG00000169760",10.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_LUSC","TCGA-56-A4BY-01A","3:MCCC1:183045413:-:3:LINC02031:182655822:+:strandcross","MCCC1--LINC02031","ENSG00000078070","ENSG00000238837",184.0,1.0,1.0,1.0,0.877808503039175,0.00216919739696]
["TCGA_LUSC","TCGA-56-A5DS-01A","16:DNAJA2:46973495:-:16:ITFG1:47218946:-:rev","DNAJA2--ITFG1","ENSG00000069345","ENSG00000129636",1.0,1.0,2.0,1.0,0.905,"NA"]
["TCGA_LUSC","TCGA-58-A46K-01A","8:RAB11FIP1:37899071:-:8:AC131254.1:29816292:-:reg","RAB11FIP1--AC131254.1","ENSG00000156675","ENSG00000248964",3.0,1.0,1.0,1.0,0.975,0.0]
["TCGA_LUSC","TCGA-60-2703-01A","19:ZSWIM4:13819492:+:19:CCDC130:13754289:+:rev","ZSWIM4--CCDC130","ENSG00000132003","ENSG00000104957",2.0,1.0,1.0,1.0,0.857,"NA"]
["TCGA_LUSC","TCGA-60-2708-01A","8:SLC20A2:42501031:-:8:ZMAT4:40532238:-:reg","SLC20A2--ZMAT4","ENSG00000168575","ENSG00000165061",34.0,1.0,1.0,1.0,0.68304014612355,0.0188679245283]
["TCGA_LUSC","TCGA-60-2713-01A","1:RPRD2:150364919:+:1:PRPF3:150349157:+:rev","RPRD2--PRPF3","ENSG00000163125","ENSG00000117360",2.0,1.0,2.0,1.0,0.556,"NA"]
["TCGA_LUSC","TCGA-60-2720-01A","10:DNMBP:100009838:-:13:TPTE2:19438153:-:fusion","DNMBP--TPTE2","ENSG00000107554","ENSG00000132958",6.0,1.0,1.0,1.0,0.517,0.00728155339806]
["TCGA_LUSC","TCGA-63-5131-01A","8:CSMD1:4994332:-:15:C15orf41:36808324:+:fusion","CSMD1--C15orf41","ENSG00000183117","ENSG00000186073",40.0,1.0,1.0,1.0,0.958965181309474,0.0]
["TCGA_LUSC","TCGA-63-A5MB-01A","9:GAPVD1:125360725:+:9:AL161908.1:126590543:-:strandcross","GAPVD1--AL161908.1","ENSG00000165219","ENSG00000224842",7.0,1.0,1.0,1.0,0.513,0.00516351118761]
["TCGA_LUSC","TCGA-63-A5MM-01A","9:MTAP:21802781:+:20:EEF1A2:63496035:-:fusion","MTAP--EEF1A2","ENSG00000099810","ENSG00000101210",9.0,1.0,1.0,1.0,0.546,0.0064829821718]
["TCGA_LUSC","TCGA-63-A5MP-01A","12:GCN1:120190298:-:12:RPLP0:120197462:-:rev","GCN1--RPLP0","ENSG00000089154","ENSG00000089157",156.0,1.0,1.0,1.0,0.965529706071692,"NA"]
["TCGA_LUSC","TCGA-66-2727-01A","3:KPNA4:160565214:-:3:ATR:142568154:-:reg","KPNA4--ATR","ENSG00000186432","ENSG00000175054",2.0,1.0,1.0,1.0,0.804,0.00934579439252]
["TCGA_LUSC","TCGA-66-2754-01A","8:NCALD:101790862:-:8:NSMCE2:125357219:+:strandcross","NCALD--NSMCE2","ENSG00000104490","ENSG00000156831",31.0,1.0,1.0,1.0,0.810476194475875,0.00263852242744]
["TCGA_LUSC","TCGA-66-2756-01A","7:PDIA4:149028321:-:3:SCHIP1:159866163:+:fusion","PDIA4--SCHIP1","ENSG00000155660","ENSG00000283154",4.0,1.0,1.0,1.0,0.875,0.00445434298441]
["TCGA_LUSC","TCGA-66-2758-01A","1:WASF2:27428761:-:1:AHDC1:27534916:-:rev","WASF2--AHDC1","ENSG00000158195","ENSG00000126705",2.0,1.0,1.0,1.0,0.544,"NA"]
["TCGA_LUSC","TCGA-66-2763-01A","19:ICAM5:10295612:+:12:NOC4L:132150981:+:fusion","ICAM5--NOC4L","ENSG00000105376","ENSG00000184967",1.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_LUSC","TCGA-66-2768-01A","5:AC025171.1:43067087:-:5:CTXN3:127653317:+:strandcross","AC025171.1--CTXN3","ENSG00000177738","ENSG00000205279",4.0,1.0,1.0,1.0,0.826,0.00355871886121]
["TCGA_LUSC","TCGA-66-2778-01A","9:B4GALT1:33135189:-:9:B4GALT1-AS1:33177420:+:strandcross","B4GALT1--B4GALT1-AS1","ENSG00000086062","ENSG00000233554",213.0,4.0,1.0,1.0,0.989271954187728,0.0]
["TCGA_LUSC","TCGA-66-2783-01A","17:MSI2:57627303:+:17:ICAM2:64003964:-:strandcross","MSI2--ICAM2","ENSG00000153944","ENSG00000108622",177.0,1.0,1.0,1.0,0.998129752955753,0.0]
["TCGA_LUSC","TCGA-66-2789-01A","1:SMYD3:246327201:-:1:AL606804.1:247565951:-:rev","SMYD3--AL606804.1","ENSG00000185420","ENSG00000236817",3.0,1.0,1.0,1.0,0.249,0.0277078085642]
["TCGA_LUSC","TCGA-66-2793-01A","2:SEMA4C:96861579:-:2:FAM178B:96902707:-:rev","SEMA4C--FAM178B","ENSG00000168758","ENSG00000168754",8.0,1.0,1.0,1.0,0.758,"NA"]
["TCGA_LUSC","TCGA-68-7755-01A","1:OTUD7B:149977426:-:1:HORMAD1:150719538:-:rev","OTUD7B--HORMAD1","ENSG00000264522","ENSG00000143452",4.0,1.0,1.0,1.0,0.976,"NA"]
["TCGA_LUSC","TCGA-68-8251-01A","4:SEPT11:76949930:+:4:SHROOM3:76770626:+:rev","SEPT11--SHROOM3","ENSG00000138758","ENSG00000138771",7.0,2.0,2.0,2.0,0.857,"NA"]
["TCGA_LUSC","TCGA-70-6723-01A","19:ZNF91:23358430:-:X:KRBOX4:46497122:+:fusion","ZNF91--KRBOX4","ENSG00000167232","ENSG00000147121",7.0,1.0,1.0,1.0,0.277,0.00909090909091]
["TCGA_LUSC","TCGA-77-7139-01A","7:PTPRZ1:121984117:+:7:WNT16:121331678:+:rev","PTPRZ1--WNT16","ENSG00000106278","ENSG00000002745",3.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_LUSC","TCGA-77-7142-01A","20:ABHD12:25302219:-:20:KIF16B:16528440:-:reg","ABHD12--KIF16B","ENSG00000100997","ENSG00000089177",7.0,1.0,1.0,1.0,0.713,0.00255102040816]
["TCGA_LUSC","TCGA-77-7463-01A","15:ADAM10:58749480:-:15:BNIP2:59682514:-:rev","ADAM10--BNIP2","ENSG00000137845","ENSG00000140299",2.0,1.0,1.0,1.0,0.784,"NA"]
["TCGA_LUSC","TCGA-77-8009-01A","9:DCAF10:37801405:+:9:PAX5:37020801:-:strandcross","DCAF10--PAX5","ENSG00000122741","ENSG00000196092",3.0,1.0,1.0,1.0,0.921,0.00176366843034]
["TCGA_LUSC","TCGA-77-8140-01A","16:MGRN1:4625048:+:16:C16orf96:4571561:+:rev","MGRN1--C16orf96","ENSG00000102858","ENSG00000205832",4.0,2.0,2.0,2.0,0.738,"NA"]
["TCGA_LUSC","TCGA-77-8148-01A","3:ATP11B:182793786:+:3:P3H2:189995442:-:strandcross","ATP11B--P3H2","ENSG00000058063","ENSG00000090530",2.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_LUSC","TCGA-77-A5G6-01A","14:RPS6KA5:90920206:-:14:ITPK1:93016801:-:rev","RPS6KA5--ITPK1","ENSG00000100784","ENSG00000100605",4.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_LUSC","TCGA-77-A5GH-01A","13:MBNL2:97357635:+:7:GLI3:42148468:-:fusion","MBNL2--GLI3","ENSG00000139793","ENSG00000106571",3.0,1.0,1.0,1.0,0.718,0.0106951871658]
["TCGA_LUSC","TCGA-79-5596-01A","5:SREK1:66153596:+:3:ST6GAL1:187038742:+:fusion","SREK1--ST6GAL1","ENSG00000153914","ENSG00000073849",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_LUSC","TCGA-85-6560-01A","14:ARHGAP5:32117287:+:14:AL358332.1:51345075:-:strandcross","ARHGAP5--AL358332.1","ENSG00000100852","ENSG00000258942",3.0,1.0,1.0,1.0,0.707,0.0014598540146]
["TCGA_LUSC","TCGA-85-7843-01A","16:ANKRD11:89418284:-:11:AP000439.3:69427363:+:fusion","ANKRD11--AP000439.3","ENSG00000167522","ENSG00000255980",3.0,1.0,1.0,1.0,0.55,0.0105485232068]
["TCGA_LUSC","TCGA-85-7843-01A","19:MED29:39393637:+:8:ADAM18:39692600:+:fusion","MED29--ADAM18","ENSG00000063322","ENSG00000168619",16.0,1.0,1.0,1.0,0.608487716420345,0.0084388185654]
["TCGA_LUSC","TCGA-85-8070-01A","1:USP48:21782824:-:1:MAN1C1:25783663:+:strandcross","USP48--MAN1C1","ENSG00000090686","ENSG00000117643",246.0,1.0,1.0,1.0,0.999974567224585,0.0]
["TCGA_LUSC","TCGA-85-8287-01A","4:KIT:54733192:+:4:SLC4A4:71236576:+:reg","KIT--SLC4A4","ENSG00000157404","ENSG00000080493",4.0,1.0,1.0,1.0,0.93,0.0]
["TCGA_LUSC","TCGA-85-8354-01A","11:EXT2:44130138:+:4:PRMT9:147680471:-:fusion","EXT2--PRMT9","ENSG00000151348","ENSG00000164169",7.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_LUSC","TCGA-85-8580-01A","1:EIF4G3:21050866:-:1:ECE1:21260392:-:rev","EIF4G3--ECE1","ENSG00000075151","ENSG00000117298",2.0,1.0,2.0,1.0,0.949,"NA"]
["TCGA_LUSC","TCGA-85-8664-01A","8:TMEM65:124371854:-:8:EXT1:117837201:-:reg","TMEM65--EXT1","ENSG00000164983","ENSG00000182197",4.0,1.0,1.0,1.0,0.211,0.010067114094]
["TCGA_LUSC","TCGA-85-A4QR-01A","20:ZFAS1:49280964:+:7:CNTNAP2:147485935:+:fusion","ZFAS1--CNTNAP2","ENSG00000177410","ENSG00000174469",3.0,1.0,1.0,1.0,0.841,0.00332225913621]
["TCGA_LUSC","TCGA-85-A510-01A","19:AKT2:40285181:-:19:MAP3K10:40209103:+:strandcross","AKT2--MAP3K10","ENSG00000105221","ENSG00000130758",23.0,1.0,1.0,1.0,0.831534907851054,0.0]
["TCGA_LUSC","TCGA-85-A53L-01A","9:RAD23B:107283695:+:9:LINC01505:106664753:+:rev","RAD23B--LINC01505","ENSG00000119318","ENSG00000234323",6.0,1.0,1.0,1.0,0.746,"NA"]
["TCGA_LUSC","TCGA-92-7340-01A","16:NUP93:56730211:+:16:MT1H:56670506:+:rev","NUP93--MT1H","ENSG00000102900","ENSG00000205358",2.0,1.0,1.0,1.0,0.616,"NA"]
["TCGA_LUSC","TCGA-92-8065-01A","5:FAT2:151549295:-:5:ATOX1:151742959:-:rev","FAT2--ATOX1","ENSG00000086570","ENSG00000177556",2.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_LUSC","TCGA-94-7943-01A","12:ARID2:45811551:+:12:SPSB2:6882287:-:strandcross","ARID2--SPSB2","ENSG00000189079","ENSG00000111671",5.0,1.0,1.0,1.0,0.33,0.0253968253968]
["TCGA_LUSC","TCGA-94-8491-01A","1:NEK7:198157276:+:1:RAB3GAP2:220213979:-:strandcross","NEK7--RAB3GAP2","ENSG00000151414","ENSG00000118873",2.0,1.0,1.0,1.0,0.947,0.0034188034188]
["TCGA_LUSC","TCGA-94-A5I6-01A","11:CPT1A:68799218:-:11:LPXN:58570713:-:reg","CPT1A--LPXN","ENSG00000110090","ENSG00000110031",3.0,1.0,1.0,1.0,0.442,0.00990099009901]
["TCGA_LUSC","TCGA-98-7454-01A","17:RPH3AL:281768:-:17:NXN:826078:-:rev","RPH3AL--NXN","ENSG00000181031","ENSG00000167693",2.0,2.0,2.0,2.0,0.652,"NA"]
["TCGA_LUSC","TCGA-98-A538-01A","20:EPB41L1:36212376:+:20:CNBD2:35995038:+:rev","EPB41L1--CNBD2","ENSG00000088367","ENSG00000149646",10.0,1.0,1.0,1.0,0.976,"NA"]
["TCGA_LUSC","TCGA-98-A53B-01A","3:ATG7:11299416:+:6:RSPH3:158983807:-:fusion","ATG7--RSPH3","ENSG00000197548","ENSG00000130363",2.0,1.0,1.0,1.0,0.685,0.00484261501211]
["TCGA_LUSC","TCGA-L3-A524-01A","20:RBM38:57392777:+:3:FRMD4B:69218379:-:fusion","RBM38--FRMD4B","ENSG00000132819","ENSG00000114541",3.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_LUSC","TCGA-LA-A7SW-01A","18:ROCK1:20991176:-:18:CDH2:27952359:-:rev","ROCK1--CDH2","ENSG00000067900","ENSG00000170558",43.0,1.0,1.0,1.0,0.958169908543237,0.0]
["TCGA_LUSC","TCGA-NC-A5HE-01A","12:MDM2:68808491:+:12:NUP107:68688962:+:rev","MDM2--NUP107","ENSG00000135679","ENSG00000111581",18.0,1.0,1.0,1.0,0.448219005421126,"NA"]
["TCGA_LUSC","TCGA-NC-A5HM-01A","19:SMARCA4:10989443:+:19:KDM4B:5071010:+:rev","SMARCA4--KDM4B","ENSG00000127616","ENSG00000127663",3.0,1.0,1.0,1.0,0.837,0.00280898876404]
["TCGA_LUSC","TCGA-NC-A5HN-01A","3:MCCC1:183086693:-:3:LAMP3:183162730:-:rev","MCCC1--LAMP3","ENSG00000078070","ENSG00000078081",3.0,1.0,1.0,1.0,0.519,"NA"]
["TCGA_LUSC","TCGA-O2-A52N-01A","1:GNB1:1804419:-:1:LINC01786:1279068:+:strandcross","GNB1--LINC01786","ENSG00000078369","ENSG00000230415",75.0,1.0,1.0,1.0,0.61199950767741,0.00333333333333]
["TCGA_LUSC","TCGA-O2-A52V-01A","6:PRIM2:57326045:+:6:NKAIN2:124355267:+:reg","PRIM2--NKAIN2","ENSG00000146143","ENSG00000188580",8.0,1.0,1.0,1.0,0.61,0.0107066381156]
["TCGA_MESO","TCGA-3H-AB3M-01A","12:MLXIP:122079266:+:7:APTR:77661333:-:fusion","MLXIP--APTR","ENSG00000175727","ENSG00000214293",25.0,1.0,1.0,1.0,0.718287630109478,0.0150943396226]
["TCGA_MESO","TCGA-3U-A98D-01A","13:ATP11A:112690455:+:8:COL14A1:120147806:+:fusion","ATP11A--COL14A1","ENSG00000068650","ENSG00000187955",12.0,1.0,1.0,1.0,0.826,0.00913242009132]
["TCGA_MESO","TCGA-MQ-A4LC-01A","3:BAP1:52406253:-:1:TCEA3:23419139:-:fusion","BAP1--TCEA3","ENSG00000163930","ENSG00000204219",15.0,1.0,1.0,1.0,0.322,0.0148514851485]
["TCGA_MESO","TCGA-NQ-A638-01A","5:CLTB:176410257:-:5:UIMC1:176905492:-:rev","CLTB--UIMC1","ENSG00000175416","ENSG00000087206",2.0,1.0,1.0,1.0,0.815,"NA"]
["TCGA_MESO","TCGA-SH-A7BD-01A","3:NBEAL2:47004590:+:17:PITPNA-AS1:1517718:+:fusion","NBEAL2--PITPNA-AS1","ENSG00000160796","ENSG00000236618",6.0,1.0,1.0,1.0,0.565,0.00207468879668]
["TCGA_MESO","TCGA-TS-A7OZ-01A","15:MGA:41750615:+:15:PLA2G4D:42081133:-:strandcross","MGA--PLA2G4D","ENSG00000174197","ENSG00000159337",3.0,1.0,1.0,1.0,0.237,0.0326975476839]
["TCGA_MESO","TCGA-TS-A7P7-01A","6:PHF3:63636150:+:6:SLC22A7:43299898:+:rev","PHF3--SLC22A7","ENSG00000118482","ENSG00000137204",5.0,1.0,1.0,1.0,0.675,0.0113636363636]
["TCGA_MESO","TCGA-TS-A8AY-01A","9:HSDL2:112380180:+:9:TEX10:100349372:-:strandcross","HSDL2--TEX10","ENSG00000119471","ENSG00000136891",12.0,1.0,1.0,1.0,0.692,0.0151515151515]
["TCGA_MESO","TCGA-XT-AASU-01A","3:KPNA1:122496437:-:3:NCK1:136927984:+:strandcross","KPNA1--NCK1","ENSG00000114030","ENSG00000158092",51.0,1.0,1.0,1.0,0.973245869800004,0.0]
["TCGA_MESO","TCGA-ZN-A9VP-01A","19:HNRNPUL1:41264692:+:1:DAB1:57884162:-:fusion","HNRNPUL1--DAB1","ENSG00000105323","ENSG00000173406",6.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_OV","TCGA-04-1332-01A","6:ESR1:152011794:+:3:DYNC1LI1:32529660:-:fusion","ESR1--DYNC1LI1","ENSG00000091831","ENSG00000144635",2.0,1.0,1.0,1.0,0.759,0.0]
["TCGA_OV","TCGA-04-1348-01A","10:FBXW4:101672915:-:10:SORCS3-AS1:104665133:-:rev","FBXW4--SORCS3-AS1","ENSG00000107829","ENSG00000226387",15.0,1.0,1.0,1.0,0.923,8.56164383562E-4]
["TCGA_OV","TCGA-04-1348-01A","12:FGFR1OP2:26938710:+:12:SSPN:26224293:+:rev","FGFR1OP2--SSPN","ENSG00000111790","ENSG00000123096",5.0,1.0,1.0,1.0,0.645,"NA"]
["TCGA_OV","TCGA-04-1356-01A","19:INSR:7267345:-:20:EIF6:35280829:-:fusion","INSR--EIF6","ENSG00000171105","ENSG00000242372",33.0,1.0,1.0,1.0,0.834326033833022,0.0]
["TCGA_OV","TCGA-04-1361-01A","11:ST14:130160060:+:8:LINC00964:124941463:+:fusion","ST14--LINC00964","ENSG00000149418","ENSG00000249816",119.0,1.0,1.0,1.0,0.956605438240445,0.0]
["TCGA_OV","TCGA-04-1362-01A","20:LAMA5:62351704:-:12:NCOR2:124356806:-:fusion","LAMA5--NCOR2","ENSG00000130702","ENSG00000196498",24.0,1.0,1.0,1.0,0.436787801689635,0.0]
["TCGA_OV","TCGA-04-1365-01A","2:ACTR3:113890323:+:2:CBWD2:113460673:+:rev","ACTR3--CBWD2","ENSG00000115091","ENSG00000136682",2.0,1.0,1.0,1.0,0.812,"NA"]
["TCGA_OV","TCGA-04-1517-01A","6:ESR1:152061124:+:6:MTHFD1L:151009819:+:rev","ESR1--MTHFD1L","ENSG00000091831","ENSG00000120254",7.0,1.0,1.0,1.0,0.717,0.00260416666667]
["TCGA_OV","TCGA-04-1517-01A","19:TOMM40:44894066:+:19:PVR:44647223:+:rev","TOMM40--PVR","ENSG00000130204","ENSG00000073008",3.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_OV","TCGA-04-1517-01A","20:SOGA1:36839217:-:20:SAMHD1:36919519:-:rev","SOGA1--SAMHD1","ENSG00000149639","ENSG00000101347",17.0,1.0,1.0,1.0,0.789896904390233,"NA"]
["TCGA_OV","TCGA-04-1651-01A","X:FAM120C:54132692:-:5:SQSTM1:179836436:+:fusion","FAM120C--SQSTM1","ENSG00000184083","ENSG00000161011",2.0,1.0,1.0,1.0,0.504,0.0]
["TCGA_OV","TCGA-04-1655-01A","6:MYO6:75749423:+:6:MCHR2-AS1:100076242:+:reg","MYO6--MCHR2-AS1","ENSG00000196586","ENSG00000229315",10.0,1.0,1.0,1.0,0.351,0.00746268656716]
["TCGA_OV","TCGA-09-0366-01A","6:EEF1A1:73519337:-:1:MUC1:155188503:-:fusion","EEF1A1--MUC1","ENSG00000156508","ENSG00000185499",3.0,1.0,1.0,1.0,0.628,7.3773515308E-4]
["TCGA_OV","TCGA-09-0367-01A","11:TAGLN:117199432:+:11:SIDT2:117195802:+:rev","TAGLN--SIDT2","ENSG00000149591","ENSG00000149577",1.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_OV","TCGA-09-0369-01A","20:CSNK2A1:543672:-:20:SNRPB:2467758:-:rev","CSNK2A1--SNRPB","ENSG00000101266","ENSG00000125835",2.0,2.0,2.0,2.0,0.828,0.0]
["TCGA_OV","TCGA-09-1659-01B","22:ACO2:41469508:+:X:UBE2A:119581507:+:fusion","ACO2--UBE2A","ENSG00000100412","ENSG00000077721",20.0,1.0,1.0,1.0,0.829221136166715,4.38788942519E-4]
["TCGA_OV","TCGA-09-1659-01B","1:DSTYK:205157273:-:1:LEMD1:205420574:-:rev","DSTYK--LEMD1","ENSG00000133059","ENSG00000186007",3.0,1.0,1.0,1.0,0.419,"NA"]
["TCGA_OV","TCGA-09-1665-01B","10:ZNF503-AS2:75402261:+:10:LRMDA:76557209:+:reg","ZNF503-AS2--LRMDA","ENSG00000237149","ENSG00000148655",8.0,1.0,1.0,1.0,0.322,0.0]
["TCGA_OV","TCGA-09-1666-01A","1:GAS5:173865471:-:1:SERPINC1:173912014:-:rev","GAS5--SERPINC1","ENSG00000234741","ENSG00000117601",2.0,1.0,1.0,1.0,0.866,"NA"]
["TCGA_OV","TCGA-09-1668-01B","19:HOOK2:12770932:-:19:MAST1:12847848:+:strandcross","HOOK2--MAST1","ENSG00000095066","ENSG00000105613",17.0,1.0,1.0,1.0,0.753315691885142,0.00983606557377]
["TCGA_OV","TCGA-09-1673-01A","12:ATP2A2:110282795:+:12:CASC18:105737256:+:rev","ATP2A2--CASC18","ENSG00000174437","ENSG00000257859",18.0,1.0,1.0,1.0,0.814988791533148,0.0]
["TCGA_OV","TCGA-09-1673-01A","7:RSBN1L:77697055:+:7:RHBDD2:75881365:+:rev","RSBN1L--RHBDD2","ENSG00000187257","ENSG00000005486",2.0,1.0,1.0,1.0,0.817,0.0]
["TCGA_OV","TCGA-09-1674-01A","1:FAM76A:27734183:+:19:AC011445.1:39316136:-:fusion","FAM76A--AC011445.1","ENSG00000009780","ENSG00000268262",138.0,1.0,1.0,1.0,0.989753555482175,0.0]
["TCGA_OV","TCGA-09-2044-01B","11:PPFIBP2:7634552:+:11:SYT9:7416042:+:rev","PPFIBP2--SYT9","ENSG00000166387","ENSG00000170743",5.0,1.0,1.0,1.0,0.758,"NA"]
["TCGA_OV","TCGA-09-2044-01B","3:MECOM:169663336:-:3:PHC3:170102934:-:rev","MECOM--PHC3","ENSG00000085276","ENSG00000173889",3.0,1.0,1.0,1.0,0.928,"NA"]
["TCGA_OV","TCGA-09-2054-01A","19:TIMM44:7943607:-:19:DAND5:12973389:+:strandcross","TIMM44--DAND5","ENSG00000104980","ENSG00000179284",12.0,1.0,1.0,1.0,0.191,0.0242634315425]
["TCGA_OV","TCGA-10-0926-01A","19:SNRNP70:49086561:+:19:TIMM44:7941197:-:strandcross","SNRNP70--TIMM44","ENSG00000104852","ENSG00000104980",73.0,1.0,1.0,1.0,0.886436618735969,0.0]
["TCGA_OV","TCGA-10-0928-01A","17:SPOP:49677933:-:17:SLC35B1:49706334:-:rev","SPOP--SLC35B1","ENSG00000121067","ENSG00000121073",41.0,1.0,1.0,1.0,0.941711604888448,"NA"]
["TCGA_OV","TCGA-10-0934-01A","8:PVT1:127796008:+:14:COQ6:73953435:+:fusion","PVT1--COQ6","ENSG00000249859","ENSG00000119723",2.0,1.0,1.0,1.0,0.826,3.56887937188E-4]
["TCGA_OV","TCGA-10-0938-01A","11:C11orf24:68268054:-:11:CCDC90B:83280260:-:rev","C11orf24--CCDC90B","ENSG00000171067","ENSG00000137500",3.0,1.0,1.0,1.0,0.871,0.0]
["TCGA_OV","TCGA-13-0725-01A","3:TATDN2:10271015:+:14:AL132801.1:102771573:-:fusion","TATDN2--AL132801.1","ENSG00000157014","ENSG00000259508",2.0,1.0,1.0,1.0,0.655,0.00131233595801]
["TCGA_OV","TCGA-13-0760-01A","3:MCCC1:183052159:-:14:RAD51B:68291884:+:fusion","MCCC1--RAD51B","ENSG00000078070","ENSG00000182185",2.0,1.0,1.0,1.0,0.663,0.0]
["TCGA_OV","TCGA-13-0762-01A","1:LINC01135:58785305:+:11:TSPAN4:847201:+:fusion","LINC01135--TSPAN4","ENSG00000234807","ENSG00000214063",4.0,1.0,1.0,1.0,0.913,0.0]
["TCGA_OV","TCGA-13-0766-01A","7:NRF1:129690546:+:7:SMKR1:129512251:+:rev","NRF1--SMKR1","ENSG00000106459","ENSG00000240204",2.0,1.0,1.0,1.0,0.453,"NA"]
["TCGA_OV","TCGA-13-0797-01A","1:SLC30A7:100921841:+:1:RTCA:100285228:+:rev","SLC30A7--RTCA","ENSG00000162695","ENSG00000137996",2.0,1.0,1.0,1.0,0.839,"NA"]
["TCGA_OV","TCGA-13-0801-01A","1:MAST2:45829581:+:21:CLDN14:36461776:-:fusion","MAST2--CLDN14","ENSG00000086015","ENSG00000159261",18.0,1.0,1.0,1.0,0.603799457970931,0.00170212765957]
["TCGA_OV","TCGA-13-0801-01A","2:USP39:85603081:+:2:VAMP5:85591725:+:rev","USP39--VAMP5","ENSG00000168883","ENSG00000168899",5.0,1.0,1.0,1.0,0.861,"NA"]
["TCGA_OV","TCGA-13-0885-01A","19:SIPA1L3:37932692:+:19:ZNF527:37388306:+:rev","SIPA1L3--ZNF527","ENSG00000105738","ENSG00000189164",3.0,1.0,1.0,1.0,0.837,"NA"]
["TCGA_OV","TCGA-13-0890-01A","1:FOXJ3:42335059:-:1:AL512353.1:42835131:-:rev","FOXJ3--AL512353.1","ENSG00000198815","ENSG00000228192",8.0,1.0,1.0,1.0,0.735,"NA"]
["TCGA_OV","TCGA-13-0893-01B","15:SCAPER:76883812:-:15:LINGO1:77615900:-:rev","SCAPER--LINGO1","ENSG00000140386","ENSG00000169783",6.0,1.0,1.0,1.0,0.544,"NA"]
["TCGA_OV","TCGA-13-0897-01A","7:AHR:17299329:+:5:LIFR-AS1:38594922:+:fusion","AHR--LIFR-AS1","ENSG00000106546","ENSG00000244968",4.0,1.0,1.0,1.0,0.793,0.0]
["TCGA_OV","TCGA-13-0899-01A","19:UHRF1:4911038:+:21:ATP5O:33914500:-:fusion","UHRF1--ATP5O","ENSG00000276043","ENSG00000249209",3.0,1.0,1.0,1.0,0.828,5.64334085779E-4]
["TCGA_OV","TCGA-13-0901-01B","4:AC139887.2:781772:-:4:SLBP:1694840:-:rev","AC139887.2--SLBP","ENSG00000249592","ENSG00000163950",109.0,1.0,1.0,1.0,0.9761163127416,"NA"]
["TCGA_OV","TCGA-13-0908-01B","3:STAG1:136752195:-:3:TBL1XR1:177065022:-:rev","STAG1--TBL1XR1","ENSG00000118007","ENSG00000177565",9.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_OV","TCGA-13-0913-01A","6:HLA-A:29942626:+:17:ITGA3:50074144:+:fusion","HLA-A--ITGA3","ENSG00000206503","ENSG00000005884",2.0,1.0,1.0,1.0,0.713,0.00177304964539]
["TCGA_OV","TCGA-13-0916-01A","14:MPP5:67241533:+:14:TCL6:95652045:+:reg","MPP5--TCL6","ENSG00000072415","ENSG00000187621",4.0,1.0,1.0,1.0,0.605,5.67214974475E-4]
["TCGA_OV","TCGA-13-0919-01A","17:COL1A1:50201411:-:20:GNAS:58895612:+:fusion","COL1A1--GNAS","ENSG00000108821","ENSG00000087460",3.0,2.0,2.0,1.0,0.977,0.0]
["TCGA_OV","TCGA-13-0924-01A","20:BCL2L1:31721844:-:6:RHAG:49615771:-:fusion","BCL2L1--RHAG","ENSG00000171552","ENSG00000112077",2.0,1.0,1.0,1.0,0.892,0.00168067226891]
["TCGA_OV","TCGA-13-1403-01A","8:IQANK1:143739948:+:8:ZNF707:143709253:+:rev","IQANK1--ZNF707","ENSG00000203499","ENSG00000181135",1.0,2.0,2.0,2.0,0.903,"NA"]
["TCGA_OV","TCGA-13-1405-01A","20:EPB41L1:36112480:+:3:HTR3C:184055312:+:fusion","EPB41L1--HTR3C","ENSG00000088367","ENSG00000178084",12.0,1.0,1.0,1.0,0.921,0.0]
["TCGA_OV","TCGA-13-1405-01A","14:EML1:99737860:+:14:CCNK:99492626:+:rev","EML1--CCNK","ENSG00000066629","ENSG00000090061",1.0,1.0,1.0,1.0,0.92,"NA"]
["TCGA_OV","TCGA-13-1405-01A","1:POU2F1:167220958:+:1:MAEL:166992686:+:rev","POU2F1--MAEL","ENSG00000143190","ENSG00000143194",33.0,1.0,1.0,1.0,0.717672386646057,"NA"]
["TCGA_OV","TCGA-13-1408-01A","10:EMX2:117549542:+:19:RPS19:41860257:+:fusion","EMX2--RPS19","ENSG00000170370","ENSG00000105372",2.0,2.0,1.0,1.0,0.812,0.00107066381156]
["TCGA_OV","TCGA-13-1410-01A","6:TRERF1:42300638:-:6:MBOAT1:20109749:-:reg","TRERF1--MBOAT1","ENSG00000124496","ENSG00000172197",7.0,1.0,1.0,1.0,0.636,0.0]
["TCGA_OV","TCGA-13-1410-01A","14:RCOR1:102593325:+:14:PPP2R5C:101925141:+:rev","RCOR1--PPP2R5C","ENSG00000089902","ENSG00000078304",17.0,1.0,1.0,1.0,0.770474414239365,"NA"]
["TCGA_OV","TCGA-13-1411-01A","2:COL3A1:189003787:+:7:AEBP1:44113252:+:fusion","COL3A1--AEBP1","ENSG00000168542","ENSG00000106624",2.0,1.0,1.0,1.0,0.773,0.0]
["TCGA_OV","TCGA-13-1481-01A","11:SF3B2:66052517:+:11:TM7SF2:65115314:+:rev","SF3B2--TM7SF2","ENSG00000087365","ENSG00000149809",1.0,1.0,1.0,1.0,0.882,"NA"]
["TCGA_OV","TCGA-13-1487-01A","X:BRCC3:155090839:+:X:CLIC2:155280068:-:strandcross","BRCC3--CLIC2","ENSG00000185515","ENSG00000155962",22.0,2.0,1.0,1.0,0.718047112484251,0.0]
["TCGA_OV","TCGA-13-1488-01A","4:AC024230.1:19455652:+:4:SLIT2:20589644:+:reg","AC024230.1--SLIT2","ENSG00000248515","ENSG00000145147",4.0,1.0,1.0,1.0,0.566,0.0]
["TCGA_OV","TCGA-13-1489-01A","3:ATP13A3:194459471:-:3:ACAP2:195289231:-:rev","ATP13A3--ACAP2","ENSG00000133657","ENSG00000114331",1.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_OV","TCGA-13-1495-01A","13:STK24:98519243:-:13:SLC15A1:98704435:-:rev","STK24--SLC15A1","ENSG00000102572","ENSG00000088386",1.0,1.0,1.0,1.0,0.86,"NA"]
["TCGA_OV","TCGA-13-1497-01A","14:HNRNPC:21269298:-:18:ZBTB7C:48185995:-:fusion","HNRNPC--ZBTB7C","ENSG00000092199","ENSG00000184828",8.0,1.0,1.0,1.0,0.801,0.0]
["TCGA_OV","TCGA-13-1497-01A","8:LONRF1:12740874:-:14:TRDC:22462932:+:fusion","LONRF1--TRDC","ENSG00000154359","ENSG00000211829",21.0,1.0,1.0,1.0,0.792907800116969,0.0016339869281]
["TCGA_OV","TCGA-13-1501-01A","8:LYPLA1:54100908:-:3:FANCD2:10039279:+:fusion","LYPLA1--FANCD2","ENSG00000120992","ENSG00000144554",1.0,1.0,1.0,1.0,0.829,0.0]
["TCGA_OV","TCGA-13-1505-01A","X:AC234772.2:45849375:-:X:LINC01204:45630073:+:strandcross","AC234772.2--LINC01204","ENSG00000231566","ENSG00000229563",3.0,1.0,1.0,1.0,0.466,0.00155763239875]
["TCGA_OV","TCGA-13-1510-01A","1:DPYD:97920884:-:15:AC087632.1:64259241:-:fusion","DPYD--AC087632.1","ENSG00000188641","ENSG00000169118",89.0,1.0,1.0,1.0,0.581324655197826,0.0017825311943]
["TCGA_OV","TCGA-13-1510-01A","4:RBM47:40544422:-:4:AC107398.2:47557911:-:rev","RBM47--AC107398.2","ENSG00000163694","ENSG00000248254",8.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_OV","TCGA-13-1511-01A","6:BAK1:33577535:-:11:AC022240.1:13921961:-:fusion","BAK1--AC022240.1","ENSG00000030110","ENSG00000254438",2.0,1.0,1.0,1.0,0.538,0.0]
["TCGA_OV","TCGA-13-1511-01A","3:XRN1:142359862:-:3:ATR:142568154:-:rev","XRN1--ATR","ENSG00000114127","ENSG00000175054",4.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_OV","TCGA-13-1512-01A","6:MRPL18:159791126:+:6:ACAT2:159775170:+:rev","MRPL18--ACAT2","ENSG00000112110","ENSG00000120437",3.0,1.0,1.0,1.0,0.75,"NA"]
["TCGA_OV","TCGA-13-A5FT-01A","10:SEC24C:73751243:+:10:PPP3CB-AS1:73519608:+:rev","SEC24C--PPP3CB-AS1","ENSG00000176986","ENSG00000221817",5.0,1.0,1.0,1.0,0.829,"NA"]
["TCGA_OV","TCGA-13-A5FT-01A","3:EIF4A2:186784477:+:3:AC068631.2:186597054:+:rev","EIF4A2--AC068631.2","ENSG00000156976","ENSG00000283149",2.0,1.0,1.0,1.0,0.651,"NA"]
["TCGA_OV","TCGA-20-0991-01A","11:INPPL1:72225166:+:21:FP236383.1:8405960:+:fusion","INPPL1--FP236383.1","ENSG00000165458","ENSG00000280441",83.0,1.0,1.0,1.0,0.446907656516554,0.00277392510402]
["TCGA_OV","TCGA-20-1683-01A","20:GMEB2:63619267:-:20:ZBTB46-AS1:63816353:+:strandcross","GMEB2--ZBTB46-AS1","ENSG00000101216","ENSG00000231208",9.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_OV","TCGA-20-1684-01A","15:NRG4:76009200:-:15:LINGO1:77796053:-:rev","NRG4--LINGO1","ENSG00000169752","ENSG00000169783",12.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_OV","TCGA-20-1684-01A","6:BMP6:7862498:+:6:NQO2:2993931:+:rev","BMP6--NQO2","ENSG00000153162","ENSG00000124588",11.0,1.0,1.0,1.0,0.412,0.00267737617135]
["TCGA_OV","TCGA-20-1685-01A","11:HSPA8:123062347:-:19:GRIK5:42042755:-:fusion","HSPA8--GRIK5","ENSG00000109971","ENSG00000105737",2.0,1.0,1.0,1.0,0.643,0.0]
["TCGA_OV","TCGA-20-1687-01A","17:SKAP1:48345905:-:6:NQO2:2993931:+:fusion","SKAP1--NQO2","ENSG00000141293","ENSG00000124588",34.0,1.0,1.0,1.0,0.748104380406858,0.0]
["TCGA_OV","TCGA-23-1023-01R","X:DANT2:115968961:-:X:KLHL13:117945575:-:rev","DANT2--KLHL13","ENSG00000235244","ENSG00000003096",3.0,4.0,2.0,1.0,0.598,0.0]
["TCGA_OV","TCGA-23-1024-01A","3:PIK3R4:130744486:-:3:AC055733.2:130899634:-:rev","PIK3R4--AC055733.2","ENSG00000196455","ENSG00000250592",4.0,1.0,1.0,1.0,0.804,"NA"]
["TCGA_OV","TCGA-23-1027-01A","1:PATJ:62114246:+:19:BCKDHA:41419135:+:fusion","PATJ--BCKDHA","ENSG00000132849","ENSG00000255730",5.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_OV","TCGA-23-1030-01A","17:FAM222B:28766586:-:17:SEZ6:28982039:-:rev","FAM222B--SEZ6","ENSG00000173065","ENSG00000063015",30.0,1.0,1.0,1.0,0.853415107793456,"NA"]
["TCGA_OV","TCGA-23-1032-01A","12:DAZAP2:51241116:+:12:ATF1:50780140:+:rev","DAZAP2--ATF1","ENSG00000183283","ENSG00000123268",2.0,1.0,2.0,1.0,0.766,"NA"]
["TCGA_OV","TCGA-23-1032-01A","6:VARS2:30915455:+:6:C6orf136:30649558:+:rev","VARS2--C6orf136","ENSG00000137411","ENSG00000204564",3.0,1.0,1.0,1.0,0.847,"NA"]
["TCGA_OV","TCGA-23-1107-01A","21:TTC3:37096643:+:21:AP000704.1:36973600:+:rev","TTC3--AP000704.1","ENSG00000182670","ENSG00000224790",1.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_OV","TCGA-23-1111-01A","19:TNPO2:12722477:-:19:AC020911.2:16292970:-:rev","TNPO2--AC020911.2","ENSG00000105576","ENSG00000267275",6.0,1.0,1.0,1.0,0.752,0.0]
["TCGA_OV","TCGA-23-1114-01B","6:FAM8A1:17602710:+:17:GRB2:75326020:-:fusion","FAM8A1--GRB2","ENSG00000137414","ENSG00000177885",1.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_OV","TCGA-23-1118-01A","12:TBK1:64452187:+:12:SRGAP1:64125977:+:rev","TBK1--SRGAP1","ENSG00000183735","ENSG00000196935",2.0,1.0,1.0,1.0,0.881,"NA"]
["TCGA_OV","TCGA-23-1122-01A","7:CUL1:148699029:+:6:MUT:49459505:-:fusion","CUL1--MUT","ENSG00000055130","ENSG00000146085",6.0,1.0,1.0,1.0,0.809,0.0]
["TCGA_OV","TCGA-23-1809-01A","20:CTNNBL1:37694152:+:20:WFDC11:45649399:-:strandcross","CTNNBL1--WFDC11","ENSG00000132792","ENSG00000180083",2.0,1.0,1.0,1.0,0.76,0.0]
["TCGA_OV","TCGA-23-2077-01A","3:NR2C2:14947906:+:3:FGD5:14910861:+:rev","NR2C2--FGD5","ENSG00000177463","ENSG00000154783",2.0,1.0,1.0,1.0,0.667,"NA"]
["TCGA_OV","TCGA-23-2078-01A","21:LINC01695:28163602:-:21:AF165147.1:28577380:-:rev","LINC01695--AF165147.1","ENSG00000236532","ENSG00000232855",2.0,1.0,1.0,1.0,0.561,"NA"]
["TCGA_OV","TCGA-24-0966-01A","4:UBE2K:39698390:+:4:UGDH-AS1:39587923:+:rev","UBE2K--UGDH-AS1","ENSG00000078140","ENSG00000249348",1.0,1.0,1.0,1.0,0.876,"NA"]
["TCGA_OV","TCGA-24-0970-01B","11:TOLLIP:1309466:-:11:AP2A2:977095:+:strandcross","TOLLIP--AP2A2","ENSG00000078902","ENSG00000183020",2.0,1.0,1.0,1.0,0.504,0.0]
["TCGA_OV","TCGA-24-0970-01B","19:C19orf25:1478774:-:19:TCF3:1627426:-:rev","C19orf25--TCF3","ENSG00000119559","ENSG00000071564",2.0,1.0,1.0,1.0,0.502,"NA"]
["TCGA_OV","TCGA-24-1103-01A","1:ZMYM4:35399576:+:19:AP2S1:46839578:-:fusion","ZMYM4--AP2S1","ENSG00000146463","ENSG00000042753",3.0,1.0,1.0,1.0,0.92,0.0]
["TCGA_OV","TCGA-24-1417-01A","X:USP9X:41086109:+:X:ERAS:48829081:+:reg","USP9X--ERAS","ENSG00000124486","ENSG00000187682",5.0,1.0,1.0,1.0,0.307,0.00239234449761]
["TCGA_OV","TCGA-24-1424-01A","10:ZMIZ1:79162133:+:10:C10orf107:61686041:+:rev","ZMIZ1--C10orf107","ENSG00000108175","ENSG00000183346",8.0,1.0,1.0,1.0,0.64,0.00108459869848]
["TCGA_OV","TCGA-24-1424-01A","7:NUPL2:23182206:+:2:EPCAM:47378953:+:fusion","NUPL2--EPCAM","ENSG00000136243","ENSG00000119888",7.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_OV","TCGA-24-1424-01A","7:NUPL2:23182489:+:2:EPCAM:47377014:+:fusion","NUPL2--EPCAM","ENSG00000136243","ENSG00000119888",3.0,1.0,1.0,1.0,0.861,0.0]
["TCGA_OV","TCGA-24-1426-01A","7:TNPO3:129054651:-:18:DYM:49163787:-:fusion","TNPO3--DYM","ENSG00000064419","ENSG00000141627",57.0,1.0,1.0,1.0,0.569468007857192,0.0]
["TCGA_OV","TCGA-24-1428-01A","X:PRPS2:12809332:+:15:TP53BP1:43428168:-:fusion","PRPS2--TP53BP1","ENSG00000101911","ENSG00000067369",5.0,1.0,1.0,1.0,0.36,0.00572948639247]
["TCGA_OV","TCGA-24-1434-01A","11:ILK:6604360:+:9:PLPPR1:101312798:+:fusion","ILK--PLPPR1","ENSG00000166333","ENSG00000148123",3.0,1.0,1.0,1.0,0.953,0.0]
["TCGA_OV","TCGA-24-1467-01A","2:AC108047.1:190535987:+:2:WDR75:189466425:+:rev","AC108047.1--WDR75","ENSG00000233654","ENSG00000115368",2.0,1.0,1.0,1.0,0.913,0.0]
["TCGA_OV","TCGA-24-1470-01A","13:KCNRG:50018920:+:13:RB1:48360017:+:rev","KCNRG--RB1","ENSG00000198553","ENSG00000139687",4.0,1.0,1.0,1.0,0.265,0.00308324768756]
["TCGA_OV","TCGA-24-1474-01A","4:APBB2:41214405:-:4:ZFYVE28:2354073:-:reg","APBB2--ZFYVE28","ENSG00000163697","ENSG00000159733",8.0,1.0,1.0,1.0,0.562,0.00199600798403]
["TCGA_OV","TCGA-24-1546-01A","22:EP300:41162779:+:21:PCBP3:45910902:+:fusion","EP300--PCBP3","ENSG00000100393","ENSG00000183570",31.0,1.0,1.0,1.0,0.676765870877928,0.0013698630137]
["TCGA_OV","TCGA-24-1550-01A","20:TASP1:13580897:-:20:R3HDML:44350660:+:strandcross","TASP1--R3HDML","ENSG00000089123","ENSG00000101074",4.0,1.0,1.0,1.0,0.772,0.0]
["TCGA_OV","TCGA-24-1553-01A","2:AGAP1:235750488:+:2:MFSD9:102732409:-:strandcross","AGAP1--MFSD9","ENSG00000157985","ENSG00000135953",6.0,1.0,1.0,1.0,0.67,0.0]
["TCGA_OV","TCGA-24-1557-01A","1:CSMD2:33825697:-:5:FYB:39153604:-:fusion","CSMD2--FYB","ENSG00000121904","ENSG00000082074",9.0,1.0,1.0,1.0,0.592,0.0]
["TCGA_OV","TCGA-24-1562-01A","11:STT3A:125597119:+:11:MIR4300HG:82356628:-:strandcross","STT3A--MIR4300HG","ENSG00000134910","ENSG00000245832",13.0,1.0,1.0,1.0,0.551,0.0]
["TCGA_OV","TCGA-24-1567-01A","8:NSMCE2:125182256:+:9:PBX3:125915686:+:fusion","NSMCE2--PBX3","ENSG00000156831","ENSG00000167081",10.0,1.0,1.0,1.0,0.947,0.0]
["TCGA_OV","TCGA-24-1616-01A","12:ADIPOR2:1702982:+:12:NINJ2:566178:-:strandcross","ADIPOR2--NINJ2","ENSG00000006831","ENSG00000171840",3.0,1.0,1.0,1.0,0.586,0.0]
["TCGA_OV","TCGA-24-1842-01A","6:PEX6:42965681:-:19:MBD3L1:8842658:+:fusion","PEX6--MBD3L1","ENSG00000124587","ENSG00000170948",6.0,1.0,1.0,1.0,0.494,9.07441016334E-4]
["TCGA_OV","TCGA-24-1845-01A","22:KLHL22:20488985:-:22:UBE2L3:21592861:+:strandcross","KLHL22--UBE2L3","ENSG00000099910","ENSG00000185651",44.0,1.0,1.0,1.0,0.220999080183212,0.00983606557377]
["TCGA_OV","TCGA-24-1850-01A","1:KIRREL:157993728:+:5:HMMR:163463856:+:fusion","KIRREL--HMMR","ENSG00000183853","ENSG00000072571",10.0,1.0,1.0,1.0,0.505,0.00684931506849]
["TCGA_OV","TCGA-24-1930-01A","5:MARCH6:10411537:+:11:UVRAG:76115924:+:fusion","MARCH6--UVRAG","ENSG00000145495","ENSG00000198382",50.0,1.0,1.0,1.0,0.914731536335011,0.0]
["TCGA_OV","TCGA-24-2020-01A","13:PCCA:100089225:+:13:AL160396.2:114200325:+:reg","PCCA--AL160396.2","ENSG00000175198","ENSG00000283361",4.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_OV","TCGA-24-2020-01A","7:SVOPL:138656448:-:7:ATP6V0A4:138745280:-:rev","SVOPL--ATP6V0A4","ENSG00000157703","ENSG00000105929",2.0,1.0,1.0,1.0,0.911,"NA"]
["TCGA_OV","TCGA-24-2023-01A","X:JADE3:46912719:+:X:NDP-AS1:43960785:+:rev","JADE3--NDP-AS1","ENSG00000102221","ENSG00000236276",30.0,1.0,1.0,1.0,0.700912485258428,0.00305810397554]
["TCGA_OV","TCGA-24-2026-01A","2:B3GNT2:62196355:+:2:KIAA1841:61081452:+:rev","B3GNT2--KIAA1841","ENSG00000170340","ENSG00000162929",2.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_OV","TCGA-24-2036-01A","11:DYNC2H1:103259977:+:12:CCDC60:119505069:+:fusion","DYNC2H1--CCDC60","ENSG00000187240","ENSG00000183273",20.0,1.0,1.0,1.0,0.79433591712032,0.0]
["TCGA_OV","TCGA-24-2281-01A","11:ARHGAP42:100795166:+:2:HIBCH:190213075:-:fusion","ARHGAP42--HIBCH","ENSG00000165895","ENSG00000198130",19.0,1.0,1.0,1.0,0.767521345892487,0.0]
["TCGA_OV","TCGA-24-2289-01A","6:TIAM2:155165409:+:6:ZDHHC14:157542585:+:reg","TIAM2--ZDHHC14","ENSG00000146426","ENSG00000175048",2.0,1.0,1.0,1.0,0.413,0.00283553875236]
["TCGA_OV","TCGA-24-2298-01A","6:MBOAT1:20212136:-:1:C1orf210:43283368:-:fusion","MBOAT1--C1orf210","ENSG00000172197","ENSG00000253313",36.0,1.0,1.0,1.0,0.76129529968357,0.0]
["TCGA_OV","TCGA-25-1314-01A","15:UBL7:74458684:-:5:MAPK9:180280608:-:fusion","UBL7--MAPK9","ENSG00000138629","ENSG00000050748",16.0,1.0,1.0,1.0,0.742101523157284,0.0]
["TCGA_OV","TCGA-25-1319-01A","18:ATP9B:79214038:+:18:PARD6G:80202932:-:strandcross","ATP9B--PARD6G","ENSG00000166377","ENSG00000178184",9.0,1.0,1.0,1.0,0.71,0.0]
["TCGA_OV","TCGA-25-1320-01A","12:ATXN2:111470108:-:12:STAT6:57099440:-:reg","ATXN2--STAT6","ENSG00000204842","ENSG00000166888",27.0,1.0,1.0,1.0,0.819898233256773,0.0]
["TCGA_OV","TCGA-25-1320-01A","20:SLC23A2:4867770:-:12:TEAD4:3037968:+:fusion","SLC23A2--TEAD4","ENSG00000089057","ENSG00000197905",13.0,1.0,1.0,1.0,0.841,0.0]
["TCGA_OV","TCGA-25-1323-01A","7:ZNF786:149090623:-:7:ABCF2:151216029:-:rev","ZNF786--ABCF2","ENSG00000197362","ENSG00000033050",5.0,1.0,1.0,1.0,0.368,0.00366748166259]
["TCGA_OV","TCGA-25-1326-01A","2:MTA3:42723035:+:2:EPCAM:47368928:+:reg","MTA3--EPCAM","ENSG00000057935","ENSG00000119888",1.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_OV","TCGA-25-1623-01A","1:AL139158.2:38047614:+:1:SYNC:32696044:-:strandcross","AL139158.2--SYNC","ENSG00000224592","ENSG00000162520",2.0,1.0,1.0,1.0,0.626,0.0]
["TCGA_OV","TCGA-25-1626-01A","20:CSE1L:49091022:+:19:LAIR2:54503700:+:fusion","CSE1L--LAIR2","ENSG00000124207","ENSG00000167618",4.0,1.0,1.0,1.0,0.353,0.00258397932817]
["TCGA_OV","TCGA-25-1633-01A","8:ZNF7:144837507:+:1:PPIE:39740165:+:fusion","ZNF7--PPIE","ENSG00000147789","ENSG00000084072",30.0,1.0,1.0,1.0,0.170711500905449,0.0116686114352]
["TCGA_OV","TCGA-25-1870-01A","12:SOX5:23665444:-:19:FFAR2:35449714:+:fusion","SOX5--FFAR2","ENSG00000134532","ENSG00000126262",72.0,1.0,1.0,1.0,0.935906477542494,0.0]
["TCGA_OV","TCGA-25-1877-01A","19:LINC00665:36315957:-:19:AXL:41257493:+:strandcross","LINC00665--AXL","ENSG00000232677","ENSG00000167601",39.0,1.0,1.0,1.0,0.907123464629187,0.0]
["TCGA_OV","TCGA-25-2393-01A","6:E2F3:20403832:+:6:RBM24:17282805:+:rev","E2F3--RBM24","ENSG00000112242","ENSG00000112183",6.0,1.0,1.0,1.0,0.721,6.05326876513E-4]
["TCGA_OV","TCGA-25-2400-01A","12:PPM1H:62934492:-:7:LINC01445:54347294:+:fusion","PPM1H--LINC01445","ENSG00000111110","ENSG00000231427",20.0,1.0,1.0,1.0,0.843211148392431,0.0]
["TCGA_OV","TCGA-29-1690-01A","19:AKT2:40237969:-:17:RILP:1646989:-:fusion","AKT2--RILP","ENSG00000105221","ENSG00000167705",1.0,1.0,1.0,1.0,0.905,0.0]
["TCGA_OV","TCGA-29-1693-01A","11:SPON1:14135568:+:11:SPON1-AS1:14263047:-:strandcross","SPON1--SPON1-AS1","ENSG00000262655","ENSG00000254418",36.0,1.0,1.0,1.0,0.814947810357997,0.0]
["TCGA_OV","TCGA-29-1699-01A","20:DIDO1:62937796:-:20:ZNF337-AS1:25632158:+:strandcross","DIDO1--ZNF337-AS1","ENSG00000101191","ENSG00000213742",2.0,1.0,1.0,1.0,0.943,0.0]
["TCGA_OV","TCGA-29-1702-01A","12:PPTC7:110582809:-:12:IGF1:102475799:-:reg","PPTC7--IGF1","ENSG00000196850","ENSG00000017427",55.0,1.0,1.0,1.0,0.899883771649618,0.0]
["TCGA_OV","TCGA-29-1702-01A","1:KIAA0319L:35554350:-:12:CASC18:105741756:+:fusion","KIAA0319L--CASC18","ENSG00000142687","ENSG00000257859",7.0,1.0,1.0,1.0,0.742,0.0]
["TCGA_OV","TCGA-29-1703-01A","19:ZNF626:20645684:-:12:RERG:15337470:-:fusion","ZNF626--RERG","ENSG00000269110","ENSG00000134533",11.0,1.0,1.0,1.0,0.874,0.0]
["TCGA_OV","TCGA-29-1703-01A","8:XKR4:55357877:+:8:AC022639.1:64151164:-:strandcross","XKR4--AC022639.1","ENSG00000206579","ENSG00000253554",2.0,1.0,1.0,1.0,0.412,0.00318979266348]
["TCGA_OV","TCGA-29-1762-01A","19:SPTBN4:40534343:+:14:TDP1:90019316:+:fusion","SPTBN4--TDP1","ENSG00000160460","ENSG00000042088",342.0,1.0,1.0,1.0,0.812237961162566,0.00144717800289]
["TCGA_OV","TCGA-29-1770-01A","8:SLC25A32:103414784:-:1:SMYD3:246335474:-:fusion","SLC25A32--SMYD3","ENSG00000164933","ENSG00000185420",2.0,2.0,1.0,1.0,0.615,0.00172413793103]
["TCGA_OV","TCGA-29-1778-01A","5:RNF130:180013061:-:5:NHP2:178150993:-:reg","RNF130--NHP2","ENSG00000113269","ENSG00000145912",10.0,1.0,1.0,1.0,0.432,0.00284495021337]
["TCGA_OV","TCGA-29-1784-01A","14:SYNJ2BP-COX16:70416900:-:20:TRPC4AP:35021332:-:fusion","SYNJ2BP-COX16--TRPC4AP","ENSG00000258644","ENSG00000100991",4.0,1.0,1.0,1.0,0.713,0.00151515151515]
["TCGA_OV","TCGA-29-A5NZ-01A","14:DICER1:95130058:-:14:SAMD4A:54567496:+:strandcross","DICER1--SAMD4A","ENSG00000100697","ENSG00000020577",2.0,1.0,1.0,1.0,0.59,0.00268576544315]
["TCGA_OV","TCGA-29-A5NZ-01A","22:RNF215:30421661:-:1:RPRD2:150470561:+:fusion","RNF215--RPRD2","ENSG00000099999","ENSG00000163125",12.0,1.0,1.0,1.0,0.261,0.00447627573859]
["TCGA_OV","TCGA-30-1718-01A","19:MUC16:8902098:-:19:ZSWIM4:13825550:+:strandcross","MUC16--ZSWIM4","ENSG00000181143","ENSG00000132003",9.0,1.0,1.0,1.0,0.407,0.0]
["TCGA_OV","TCGA-30-1718-01A","2:TIA1:70230756:-:2:FAM136A:70301603:-:rev","TIA1--FAM136A","ENSG00000116001","ENSG00000035141",2.0,1.0,1.0,1.0,0.9,"NA"]
["TCGA_OV","TCGA-30-1855-01A","17:MPP2:43898262:-:17:C1QL1:44960367:-:rev","MPP2--C1QL1","ENSG00000108852","ENSG00000131094",8.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_OV","TCGA-30-1861-01A","6:DOPEY1:83067779:+:6:SMIM8:87337009:+:reg","DOPEY1--SMIM8","ENSG00000083097","ENSG00000111850",36.0,1.0,1.0,1.0,0.564532317665027,0.0]
["TCGA_OV","TCGA-31-1946-01A","1:CSDE1:114749821:-:16:RBFOX1:7518147:+:fusion","CSDE1--RBFOX1","ENSG00000009307","ENSG00000078328",87.0,1.0,1.0,1.0,0.878650560700098,0.0]
["TCGA_OV","TCGA-31-1951-01A","20:CDK5RAP1:33379461:-:7:TMEM248:66941848:+:fusion","CDK5RAP1--TMEM248","ENSG00000101391","ENSG00000106609",25.0,1.0,1.0,1.0,0.804898267107699,0.0]
["TCGA_OV","TCGA-31-1953-01A","12:EP400NL:132084399:+:12:ADGRD1:131076801:+:rev","EP400NL--ADGRD1","ENSG00000185684","ENSG00000111452",3.0,1.0,1.0,1.0,0.765,0.00102459016393]
["TCGA_OV","TCGA-31-1953-01A","9:PRRX2:129666126:+:9:LINC00963:129489209:+:rev","PRRX2--LINC00963","ENSG00000167157","ENSG00000204054",2.0,1.0,1.0,1.0,0.812,"NA"]
["TCGA_OV","TCGA-36-1568-01A","2:TANC1:159199053:+:2:PKP4:158533180:+:rev","TANC1--PKP4","ENSG00000115183","ENSG00000144283",11.0,1.0,1.0,1.0,0.547,"NA"]
["TCGA_OV","TCGA-36-1574-01A","22:LARGE1:33564848:-:19:OPA3:45529456:-:fusion","LARGE1--OPA3","ENSG00000133424","ENSG00000125741",5.0,1.0,1.0,1.0,0.546,0.0]
["TCGA_OV","TCGA-36-1575-01A","22:MTMR3:29883359:+:22:ZNRF3:28987076:+:rev","MTMR3--ZNRF3","ENSG00000100330","ENSG00000183579",9.0,1.0,1.0,1.0,0.523,"NA"]
["TCGA_OV","TCGA-36-1576-01A","1:THRAP3:36225102:+:1:MAP7D1:36176199:+:rev","THRAP3--MAP7D1","ENSG00000054118","ENSG00000116871",3.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_OV","TCGA-36-1577-01A","19:NFIX:13081855:+:19:CALR:12943537:+:rev","NFIX--CALR","ENSG00000008441","ENSG00000179218",67.0,1.0,1.0,1.0,0.898578589030931,"NA"]
["TCGA_OV","TCGA-36-1578-01A","22:MYH9:36291986:-:22:CACNG2:36587548:-:rev","MYH9--CACNG2","ENSG00000100345","ENSG00000166862",2.0,1.0,1.0,1.0,0.909,"NA"]
["TCGA_OV","TCGA-36-1581-01A","22:TUBGCP6:50224141:-:22:MAPK11:50267949:-:rev","TUBGCP6--MAPK11","ENSG00000128159","ENSG00000185386",2.0,1.0,1.0,1.0,0.498,"NA"]
["TCGA_OV","TCGA-3P-A9WA-01A","1:RPS6KC1:213051509:+:1:FLVCR1:212895216:+:rev","RPS6KC1--FLVCR1","ENSG00000136643","ENSG00000162769",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_OV","TCGA-57-1582-01A","9:PRRC2B:131394263:+:9:NUP214:131197216:+:rev","PRRC2B--NUP214","ENSG00000130723","ENSG00000126883",2.0,1.0,1.0,1.0,0.491,"NA"]
["TCGA_OV","TCGA-57-1585-01A","19:OAZ1:2269744:+:14:CKB:103520592:-:fusion","OAZ1--CKB","ENSG00000104904","ENSG00000166165",2.0,1.0,1.0,1.0,0.459,4.72143531634E-4]
["TCGA_OV","TCGA-57-1585-01A","2:STK36:218673956:+:2:BCS1L:218662883:+:rev","STK36--BCS1L","ENSG00000163482","ENSG00000074582",3.0,1.0,1.0,1.0,0.605,"NA"]
["TCGA_OV","TCGA-57-1993-01A","12:PEX5:7202704:+:12:C1S:7056041:+:rev","PEX5--C1S","ENSG00000139197","ENSG00000182326",4.0,1.0,1.0,1.0,0.627,"NA"]
["TCGA_OV","TCGA-59-2348-01A","19:ZNF83:52655561:-:19:TARM1:54070160:-:rev","ZNF83--TARM1","ENSG00000167766","ENSG00000248385",448.0,1.0,1.0,1.0,0.993033904437892,0.0]
["TCGA_OV","TCGA-59-2354-01A","3:PDCD10:167734459:-:X:CNKSR2:21648831:+:fusion","PDCD10--CNKSR2","ENSG00000114209","ENSG00000149970",2.0,1.0,1.0,1.0,0.444,8.29875518672E-4]
["TCGA_OV","TCGA-59-A5PD-01A","14:SEL1L:81533675:-:7:MIOS:7585636:+:fusion","SEL1L--MIOS","ENSG00000071537","ENSG00000164654",112.0,1.0,1.0,1.0,0.96764704475477,0.0]
["TCGA_OV","TCGA-5X-AA5U-01A","19:SIPA1L3:38088851:+:12:ERC1:1083164:+:fusion","SIPA1L3--ERC1","ENSG00000105738","ENSG00000082805",24.0,1.0,1.0,1.0,0.853052379130326,0.0]
["TCGA_OV","TCGA-61-1724-01A","2:UBXN4:135769823:+:2:R3HDM1:135602500:+:rev","UBXN4--R3HDM1","ENSG00000144224","ENSG00000048991",7.0,1.0,1.0,1.0,0.485,"NA"]
["TCGA_OV","TCGA-61-1728-01A","22:PLA2G6:38143105:-:20:CNBD2:35972629:+:fusion","PLA2G6--CNBD2","ENSG00000184381","ENSG00000149646",2.0,1.0,1.0,1.0,0.41,0.0]
["TCGA_OV","TCGA-61-1733-01A","6:UTRN:144447781:+:6:STX11:144186623:+:rev","UTRN--STX11","ENSG00000152818","ENSG00000135604",3.0,1.0,1.0,1.0,0.615,"NA"]
["TCGA_OV","TCGA-61-1738-01A","17:EXOC7:76087654:-:7:ACHE:100894255:-:fusion","EXOC7--ACHE","ENSG00000182473","ENSG00000087085",10.0,1.0,1.0,1.0,0.899,0.0]
["TCGA_OV","TCGA-61-1738-01A","14:STRN3:31025904:-:14:HECTD1:31114340:-:rev","STRN3--HECTD1","ENSG00000196792","ENSG00000092148",2.0,1.0,1.0,1.0,0.54,"NA"]
["TCGA_OV","TCGA-61-1740-01A","10:YME1L1:27148906:-:10:ZNF438:30910440:-:rev","YME1L1--ZNF438","ENSG00000136758","ENSG00000183621",5.0,1.0,1.0,1.0,0.618,0.0]
["TCGA_OV","TCGA-61-1740-01A","16:NARFL:737186:-:16:RPUSD1:787477:-:rev","NARFL--RPUSD1","ENSG00000103245","ENSG00000007376",1.0,1.0,1.0,1.0,0.958,"NA"]
["TCGA_OV","TCGA-61-1743-01A","11:PAK1:77473552:-:11:GAB2:78280901:-:rev","PAK1--GAB2","ENSG00000149269","ENSG00000033327",2.0,1.0,1.0,1.0,0.774,"NA"]
["TCGA_OV","TCGA-61-1911-01A","3:TM4SF1:149371687:-:20:FKBP1A:1369039:-:fusion","TM4SF1--FKBP1A","ENSG00000169908","ENSG00000088832",3.0,1.0,1.0,1.0,0.282,0.0109375]
["TCGA_OV","TCGA-61-1917-01A","11:SF1:64773430:-:11:MAJIN:64938573:-:rev","SF1--MAJIN","ENSG00000168066","ENSG00000168070",67.0,1.0,1.0,1.0,0.926353620707582,"NA"]
["TCGA_OV","TCGA-61-1917-01A","1:H3F3A:226065809:+:1:DNAH14:225270735:+:rev","H3F3A--DNAH14","ENSG00000163041","ENSG00000185842",1.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_OV","TCGA-61-1918-01A","10:INPP5A:132538171:+:10:LRRC27:132365424:+:rev","INPP5A--LRRC27","ENSG00000068383","ENSG00000148814",1.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_OV","TCGA-61-2000-01A","22:TTC28:28442886:-:22:EIF4ENIF1:31471917:-:rev","TTC28--EIF4ENIF1","ENSG00000100154","ENSG00000184708",6.0,1.0,1.0,1.0,0.651,0.0]
["TCGA_OV","TCGA-61-2000-01A","19:FKBP8:18538216:-:19:MEF2B:19147832:-:rev","FKBP8--MEF2B","ENSG00000105701","ENSG00000064489",27.0,1.0,1.0,1.0,0.831852371067236,"NA"]
["TCGA_OV","TCGA-61-2002-01A","19:LINC00665:36330253:-:19:ZNF841:52067610:-:rev","LINC00665--ZNF841","ENSG00000232677","ENSG00000197608",1.0,1.0,1.0,1.0,0.781,0.0]
["TCGA_OV","TCGA-61-2008-02A","6:C6orf106:34696446:-:6:KIF6:39431161:-:rev","C6orf106--KIF6","ENSG00000196821","ENSG00000164627",10.0,1.0,1.0,1.0,0.316,0.00477326968974]
["TCGA_OV","TCGA-61-2012-01A","2:R3HDM1:135531633:+:2:RAB3GAP1:135090998:+:rev","R3HDM1--RAB3GAP1","ENSG00000048991","ENSG00000115839",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_OV","TCGA-61-2092-01A","9:RC3H2:122892909:-:7:NRF1:129630078:+:fusion","RC3H2--NRF1","ENSG00000056586","ENSG00000106459",95.0,1.0,1.0,1.0,0.734087467518738,0.0]
["TCGA_OV","TCGA-61-2094-01A","10:CAMK1D:12349910:+:10:DHTKD1:12118749:+:rev","CAMK1D--DHTKD1","ENSG00000183049","ENSG00000181192",3.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_OV","TCGA-61-2094-01A","9:APTX:33025000:-:9:AQP3:33443892:-:rev","APTX--AQP3","ENSG00000137074","ENSG00000165272",1.0,1.0,1.0,1.0,0.943,"NA"]
["TCGA_OV","TCGA-61-2101-01A","22:Z98749.3:38398438:-:22:APOL6:35658615:+:strandcross","Z98749.3--APOL6","ENSG00000283900","ENSG00000221963",10.0,1.0,1.0,1.0,0.485,0.0]
["TCGA_OV","TCGA-61-2102-01A","6:FAM135A:70502791:+:12:LMO3:16560538:-:fusion","FAM135A--LMO3","ENSG00000082269","ENSG00000048540",10.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_OV","TCGA-61-2111-01A","17:CPD:30385236:+:17:MYL4:47209389:+:reg","CPD--MYL4","ENSG00000108582","ENSG00000198336",44.0,1.0,1.0,1.0,0.894795267970423,0.0]
["TCGA_OV","TCGA-61-2113-01A","19:KIAA0355:34333801:+:15:AC090607.1:78295668:+:fusion","KIAA0355--AC090607.1","ENSG00000166398","ENSG00000259322",56.0,1.0,1.0,1.0,0.821231178002587,0.0]
["TCGA_OV","TCGA-VG-A8LO-01A","11:FCHSD2:73140031:-:6:AL078590.2:134475225:-:fusion","FCHSD2--AL078590.2","ENSG00000137478","ENSG00000231971",21.0,1.0,1.0,1.0,0.195070624725654,0.00197823936696]
["TCGA_OV","TCGA-VG-A8LO-01A","20:PARD6B:50738079:+:20:PTPN1:50561363:+:rev","PARD6B--PTPN1","ENSG00000124171","ENSG00000196396",3.0,1.0,1.0,1.0,0.74,"NA"]
["TCGA_PAAD","TCGA-2J-AABO-01A","3:SEC22A:123246014:+:3:NPHP3-AS1:132748728:+:reg","SEC22A--NPHP3-AS1","ENSG00000121542","ENSG00000248724",8.0,1.0,1.0,1.0,0.901,0.00847457627119]
["TCGA_PAAD","TCGA-3A-A9IB-01A","3:ROBO2:75937602:+:3:LINC00877:72036520:-:strandcross","ROBO2--LINC00877","ENSG00000185008","ENSG00000241163",3.0,1.0,1.0,1.0,0.379,0.00655737704918]
["TCGA_PAAD","TCGA-F2-6879-01A","2:TANK:161204793:+:2:MARCH7:159767284:+:rev","TANK--MARCH7","ENSG00000136560","ENSG00000136536",4.0,1.0,1.0,1.0,0.856,0.00568181818182]
["TCGA_PAAD","TCGA-FB-AAQ3-01A","5:DTWD2:118988294:-:5:AC008629.1:119020240:-:rev","DTWD2--AC008629.1","ENSG00000169570","ENSG00000249494",1.0,1.0,1.0,1.0,0.931,"NA"]
["TCGA_PAAD","TCGA-HZ-7926-01A","19:TYK2:10378214:-:19:CDC37:10393441:-:rev","TYK2--CDC37","ENSG00000105397","ENSG00000105401",5.0,2.0,1.0,1.0,0.744,"NA"]
["TCGA_PAAD","TCGA-HZ-8317-01A","7:PRSS1:142749524:+:7:CPA1:130385146:+:rev","PRSS1--CPA1","ENSG00000204983","ENSG00000091704",3.0,1.0,2.0,1.0,0.995,0.0]
["TCGA_PAAD","TCGA-HZ-A4BH-01A","15:AC025580.2:45448801:+:15:USP8:50439009:+:reg","AC025580.2--USP8","ENSG00000259354","ENSG00000138592",2.0,1.0,1.0,1.0,0.931,0.0]
["TCGA_PAAD","TCGA-IB-7647-01A","6:GMDS:1930103:-:20:VAPB:58444077:+:fusion","GMDS--VAPB","ENSG00000112699","ENSG00000124164",222.0,1.0,1.0,1.0,0.847477249412639,0.0040404040404]
["TCGA_PAAD","TCGA-IB-7885-01A","2:FN1:215375214:-:12:MYL6:56159587:+:fusion","FN1--MYL6","ENSG00000115414","ENSG00000196465",2.0,1.0,1.0,1.0,0.794,0.00325203252033]
["TCGA_PAAD","TCGA-IB-A6UG-01A","6:SUPT3H:45003653:-:5:AC106821.1:24882302:-:fusion","SUPT3H--AC106821.1","ENSG00000196284","ENSG00000250524",16.0,1.0,1.0,1.0,0.800406127001622,0.0056338028169]
["TCGA_PAAD","TCGA-IB-AAUP-01A","17:AXIN2:65557806:-:2:VWA3B:98256124:+:fusion","AXIN2--VWA3B","ENSG00000168646","ENSG00000168658",8.0,1.0,1.0,1.0,0.838,0.0079575596817]
["TCGA_PAAD","TCGA-PZ-A5RE-01A","19:AC092279.1:24049548:+:19:LINC01791:31195590:+:reg","AC092279.1--LINC01791","ENSG00000268362","ENSG00000267777",23.0,1.0,1.0,1.0,0.88064945659009,0.00511508951407]
["TCGA_PAAD","TCGA-XD-AAUI-01A","11:NFRKB:129876721:-:11:CRTAM:122850068:+:strandcross","NFRKB--CRTAM","ENSG00000170322","ENSG00000109943",2.0,1.0,1.0,1.0,0.735,0.0]
["TCGA_PCPG","TCGA-P8-A5KC-01A","17:UBTF:44210124:-:4:MAML3:139890967:-:fusion","UBTF--MAML3","ENSG00000108312","ENSG00000196782",7.0,3.0,3.0,3.0,0.49,0.00657894736842]
["TCGA_PCPG","TCGA-QR-A700-01A","17:LRRC75A-AS1:16440253:+:17:TRPV2:16436789:+:rev","LRRC75A-AS1--TRPV2","ENSG00000175061","ENSG00000187688",2.0,1.0,1.0,1.0,0.719,"NA"]
["TCGA_PCPG","TCGA-QT-A5XJ-01A","20:MACROD2:14493508:+:20:SPTLC3:13091083:+:rev","MACROD2--SPTLC3","ENSG00000172264","ENSG00000172296",1.0,1.0,1.0,1.0,0.732,0.00508905852417]
["TCGA_PCPG","TCGA-QT-A5XO-01A","19:ARHGAP35:46937408:+:15:PGPEP1L:98969651:-:fusion","ARHGAP35--PGPEP1L","ENSG00000160007","ENSG00000183571",3.0,1.0,1.0,1.0,0.936,0.0]
["TCGA_PCPG","TCGA-RW-A67Y-01A","8:ASAP1:130358017:-:8:AC090987.1:130599071:-:rev","ASAP1--AC090987.1","ENSG00000153317","ENSG00000253656",23.0,1.0,1.0,1.0,0.715119306386437,"NA"]
["TCGA_PCPG","TCGA-RW-A8AZ-01A","7:PPP1R9A:95198484:+:3:KCNMB2-AS1:178526625:-:fusion","PPP1R9A--KCNMB2-AS1","ENSG00000158528","ENSG00000237978",2.0,1.0,1.0,1.0,0.828,0.015625]
["TCGA_PCPG","TCGA-SR-A6MP-01A","1:USP33:77759643:-:17:CDK12:39470879:+:fusion","USP33--CDK12","ENSG00000077254","ENSG00000167258",2.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_PCPG","TCGA-TT-A6YN-01A","5:GFRA3:138257639:-:14:TTC8:88875026:+:fusion","GFRA3--TTC8","ENSG00000146013","ENSG00000165533",10.0,1.0,1.0,1.0,0.876,0.00389105058366]
["TCGA_PCPG","TCGA-WB-A81D-01A","20:PCSK2:17429523:+:7:AC002429.2:95108941:-:fusion","PCSK2--AC002429.2","ENSG00000125851","ENSG00000236197",5.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_PCPG","TCGA-WB-A81S-01A","10:FAM160B1:114833402:+:10:ADK:74589282:+:rev","FAM160B1--ADK","ENSG00000151553","ENSG00000156110",37.0,1.0,1.0,1.0,0.726594566126343,0.012]
["TCGA_PRAD","TCGA-2A-A8VT-01A","12:GCN1:120194680:-:12:METTL1:57771257:-:reg","GCN1--METTL1","ENSG00000089154","ENSG00000037897",13.0,1.0,1.0,1.0,0.705,0.0]
["TCGA_PRAD","TCGA-2A-A8W1-01A","4:FAM114A1:38868546:+:4:KCNIP4:21763032:-:strandcross","FAM114A1--KCNIP4","ENSG00000197712","ENSG00000185774",4.0,1.0,1.0,1.0,0.815,0.00342465753425]
["TCGA_PRAD","TCGA-2A-A8W3-01A","4:DANCR:52712959:+:5:C1QTNF3-AMACR:34005899:-:fusion","DANCR--C1QTNF3-AMACR","ENSG00000226950","ENSG00000242110",2.0,2.0,3.0,2.0,0.54,0.008356545961]
["TCGA_PRAD","TCGA-CH-5737-01A","3:RAF1:12604136:-:5:AGGF1:77046347:+:fusion","RAF1--AGGF1","ENSG00000132155","ENSG00000164252",5.0,13.0,13.0,12.0,0.162,0.00598086124402]
["TCGA_PRAD","TCGA-CH-5741-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",184.0,174.0,173.0,171.0,0.994775248266739,0.0]
["TCGA_PRAD","TCGA-CH-5745-01A","1:YTHDF2:28743986:+:5:ARSB:78781974:-:fusion","YTHDF2--ARSB","ENSG00000198492","ENSG00000113273",11.0,1.0,1.0,1.0,0.218,0.0149253731343]
["TCGA_PRAD","TCGA-CH-5751-01A","17:RPL23:38852604:-:6:BRD2:32971595:+:fusion","RPL23--BRD2","ENSG00000125691","ENSG00000204256",10.0,1.0,2.0,1.0,0.334,0.0161290322581]
["TCGA_PRAD","TCGA-CH-5752-01A","21:TMPRSS2:41498119:-:21:ERG:38474121:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",4.0,17.0,16.0,13.0,0.863,0.00314465408805]
["TCGA_PRAD","TCGA-CH-5762-01A","21:TMPRSS2:41508081:-:21:MORC3:36333646:+:strandcross","TMPRSS2--MORC3","ENSG00000184012","ENSG00000159256",24.0,1.0,1.0,1.0,0.287467423496821,0.00343642611684]
["TCGA_PRAD","TCGA-CH-5765-01A","10:ZNF33A:38017015:+:10:AL392046.1:35101060:-:strandcross","ZNF33A--AL392046.1","ENSG00000189180","ENSG00000230534",7.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_PRAD","TCGA-CH-5766-01A","1:GATAD2B:153922733:-:1:NENF:212442565:+:strandcross","GATAD2B--NENF","ENSG00000143614","ENSG00000117691",3.0,1.0,1.0,1.0,0.217,0.0108225108225]
["TCGA_PRAD","TCGA-CH-5769-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",71.0,174.0,173.0,171.0,0.823257961698667,0.0]
["TCGA_PRAD","TCGA-CH-5789-01A","21:TMPRSS2:41498119:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",1.0,68.0,66.0,65.0,0.687,0.0045871559633]
["TCGA_PRAD","TCGA-EJ-5496-01A","5:GOLPH3:32173810:-:5:SLC6A19:1218903:+:strandcross","GOLPH3--SLC6A19","ENSG00000113384","ENSG00000174358",6.0,1.0,1.0,1.0,0.513,0.00862068965517]
["TCGA_PRAD","TCGA-EJ-5499-01A","21:TMPRSS2:41498119:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",74.0,68.0,66.0,65.0,0.92111986414955,0.0020964360587]
["TCGA_PRAD","TCGA-EJ-5502-01A","21:TMPRSS2:41488394:-:5:C1QTNF3-AMACR:34005899:-:fusion","TMPRSS2--C1QTNF3-AMACR","ENSG00000184012","ENSG00000242110",2.0,1.0,1.0,1.0,0.391,0.013698630137]
["TCGA_PRAD","TCGA-EJ-5507-01A","3:ATP11B:182845522:+:11:CARS:3005433:-:fusion","ATP11B--CARS","ENSG00000058063","ENSG00000110619",91.0,1.0,1.0,1.0,0.581349468927423,0.0014245014245]
["TCGA_PRAD","TCGA-EJ-5510-01A","7:LUC7L2:139360322:+:7:ETV1:13939246:-:strandcross","LUC7L2--ETV1","ENSG00000146963","ENSG00000006468",30.0,2.0,2.0,2.0,0.860397548819521,0.00578034682081]
["TCGA_PRAD","TCGA-EJ-5514-01A","20:RBM39:35713019:-:20:WFDC13:45704444:+:strandcross","RBM39--WFDC13","ENSG00000131051","ENSG00000168634",4.0,1.0,1.0,1.0,0.824,0.00380228136882]
["TCGA_PRAD","TCGA-EJ-5518-01A","19:HNRNPUL1:41281275:+:19:SLC8A2:47457594:-:strandcross","HNRNPUL1--SLC8A2","ENSG00000105323","ENSG00000118160",68.0,1.0,1.0,1.0,0.836064087745635,0.00230414746544]
["TCGA_PRAD","TCGA-EJ-5518-01A","1:TOR1AIP2:179877239:-:1:IFI16:159051679:+:strandcross","TOR1AIP2--IFI16","ENSG00000169905","ENSG00000163565",3.0,1.0,1.0,1.0,0.533,0.0115207373272]
["TCGA_PRAD","TCGA-EJ-5521-01A","21:TMPRSS2:41498119:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",49.0,68.0,66.0,65.0,0.917109940605136,0.00261780104712]
["TCGA_PRAD","TCGA-EJ-5524-01A","10:LCOR:96832399:+:10:CC2D2B:95922016:+:rev","LCOR--CC2D2B","ENSG00000196233","ENSG00000270099",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_PRAD","TCGA-EJ-5526-01A","X:FGF13:139204059:-:20:CSE1L:49067190:+:fusion","FGF13--CSE1L","ENSG00000129682","ENSG00000124207",2.0,1.0,1.0,1.0,0.951,0.0]
["TCGA_PRAD","TCGA-EJ-5542-01A","12:RBMS2:56522089:+:12:TMCC3:94582538:-:strandcross","RBMS2--TMCC3","ENSG00000076067","ENSG00000057704",5.0,1.0,1.0,1.0,0.789,0.00480769230769]
["TCGA_PRAD","TCGA-EJ-7314-01A","21:TMPRSS2:41489507:-:8:GRHL2:101552715:+:fusion","TMPRSS2--GRHL2","ENSG00000184012","ENSG00000083307",41.0,2.0,2.0,2.0,0.565251524394,0.0133689839572]
["TCGA_PRAD","TCGA-EJ-7318-01B","17:TMEM104:74777375:+:14:LIN52:74091232:+:fusion","TMEM104--LIN52","ENSG00000109066","ENSG00000205659",12.0,1.0,1.0,1.0,0.656,0.00358422939068]
["TCGA_PRAD","TCGA-EJ-7327-01A","5:GPBP1:57231321:+:5:MTRR:7870770:+:rev","GPBP1--MTRR","ENSG00000062194","ENSG00000124275",13.0,1.0,1.0,1.0,0.483,0.0089485458613]
["TCGA_PRAD","TCGA-EJ-7782-01A","5:RASA1:87268990:+:5:CDH12:22212643:-:strandcross","RASA1--CDH12","ENSG00000145715","ENSG00000154162",5.0,1.0,1.0,1.0,0.809,0.00239808153477]
["TCGA_PRAD","TCGA-EJ-7784-01A","1:SDE2:225995266:-:1:SLC22A15:116019582:+:strandcross","SDE2--SLC22A15","ENSG00000143751","ENSG00000163393",4.0,1.0,1.0,1.0,0.823,0.00831024930748]
["TCGA_PRAD","TCGA-EJ-7788-01A","21:TMPRSS2:41507950:-:7:ETV1:13939246:-:fusion","TMPRSS2--ETV1","ENSG00000184012","ENSG00000006468",15.0,3.0,2.0,2.0,0.271,0.0387409200969]
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["TCGA_PRAD","TCGA-G9-7525-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",46.0,174.0,173.0,171.0,0.948470233543378,0.0]
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["TCGA_PRAD","TCGA-HC-7230-01A","19:KLK3:50858595:+:1:LRRC41:46279257:-:fusion","KLK3--LRRC41","ENSG00000142515","ENSG00000132128",4.0,1.0,1.0,1.0,0.557,0.00534759358289]
["TCGA_PRAD","TCGA-HC-7232-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",87.0,174.0,173.0,171.0,0.967694652584635,0.0]
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["TCGA_PRAD","TCGA-HC-8266-01A","1:ELK4:205631632:-:17:EPN2:19281955:+:fusion","ELK4--EPN2","ENSG00000158711","ENSG00000072134",4.0,1.0,1.0,1.0,0.835,0.0036496350365]
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["TCGA_PRAD","TCGA-KK-A59Z-01A","X:KANTR:53094284:+:X:PAGE5:55221375:+:reg","KANTR--PAGE5","ENSG00000232593","ENSG00000158639",27.0,1.0,1.0,1.0,0.88255699546615,0.012]
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["TCGA_PRAD","TCGA-KK-A6E0-01A","8:AC246817.1:2727493:+:8:ST18:52230077:-:strandcross","AC246817.1--ST18","ENSG00000253853","ENSG00000147488",4.0,1.0,1.0,1.0,0.985,0.0]
["TCGA_PRAD","TCGA-KK-A6E1-01A","3:RYK:134188837:-:3:SLC9A9-AS1:143346986:+:strandcross","RYK--SLC9A9-AS1","ENSG00000163785","ENSG00000240012",8.0,1.0,1.0,1.0,0.456,0.0119047619048]
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["TCGA_PRAD","TCGA-KK-A7B4-01A","2:GIGYF2:232703489:+:2:TMEM163:134552091:-:strandcross","GIGYF2--TMEM163","ENSG00000204120","ENSG00000152128",1.0,1.0,1.0,1.0,0.86,0.00190839694656]
["TCGA_PRAD","TCGA-KK-A8I6-01A","1:CCT3:156333547:-:1:RAB13:153984781:-:reg","CCT3--RAB13","ENSG00000163468","ENSG00000143545",31.0,1.0,1.0,1.0,0.446618195256387,0.0027027027027]
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["TCGA_PRAD","TCGA-KK-A8II-01A","2:SPTBN1:54599243:+:6:ECI2:4133711:-:fusion","SPTBN1--ECI2","ENSG00000115306","ENSG00000198721",10.0,1.0,1.0,1.0,0.36,0.0119047619048]
["TCGA_PRAD","TCGA-KK-A8IM-01A","21:TMPRSS2:41508081:-:21:ERG:38584945:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",100.0,19.0,13.0,12.0,0.77127590904096,0.0]
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["TCGA_PRAD","TCGA-V1-A8WS-01A","18:DYM:49363161:-:18:KATNAL2:47052880:+:strandcross","DYM--KATNAL2","ENSG00000141627","ENSG00000167216",4.0,1.0,1.0,1.0,0.187,0.013698630137]
["TCGA_PRAD","TCGA-V1-A8WW-01A","8:NDRG1:133280232:-:21:ERG:38445621:-:fusion","NDRG1--ERG","ENSG00000104419","ENSG00000157554",64.0,4.0,5.0,4.0,0.911587878657287,0.00322580645161]
["TCGA_PRAD","TCGA-V1-A9O5-06A","19:C19orf54:40743905:-:19:AC010624.1:50061800:+:strandcross","C19orf54--AC010624.1","ENSG00000188493","ENSG00000204666",2.0,1.0,1.0,1.0,0.867,0.00248138957816]
["TCGA_PRAD","TCGA-V1-A9O5-06A","19:ZNF585A:37155865:-:19:FXYD1:35140076:+:strandcross","ZNF585A--FXYD1","ENSG00000267360","ENSG00000266964",3.0,1.0,1.0,1.0,0.514,0.0198511166253]
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["TCGA_PRAD","TCGA-VN-A88O-01A","15:AC022087.1:50359866:-:19:KLK3:50858158:+:fusion","AC022087.1--KLK3","ENSG00000259715","ENSG00000142515",3.0,1.0,1.0,1.0,0.224,0.011396011396]
["TCGA_PRAD","TCGA-VN-A943-01A","X:MAOB:43882254:-:X:AC136489.1:45323547:+:strandcross","MAOB--AC136489.1","ENSG00000069535","ENSG00000229491",1.0,1.0,1.0,1.0,0.745,0.0]
["TCGA_PRAD","TCGA-VP-A875-01A","4:SLC4A4:71547720:+:3:GOLGA4:37355101:+:fusion","SLC4A4--GOLGA4","ENSG00000080493","ENSG00000144674",6.0,1.0,1.0,1.0,0.375,0.00902934537246]
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["TCGA_PRAD","TCGA-VP-A87J-01A","2:SCHLAP1:180724690:+:5:C1QTNF3-AMACR:34005899:-:fusion","SCHLAP1--C1QTNF3-AMACR","ENSG00000281131","ENSG00000242110",3.0,14.0,13.0,11.0,0.986,0.0]
["TCGA_PRAD","TCGA-VP-AA1N-01A","4:GALNT7:173304118:+:4:CEP44:174331482:+:reg","GALNT7--CEP44","ENSG00000109586","ENSG00000164118",140.0,1.0,1.0,1.0,0.979886149612901,0.00257731958763]
["TCGA_PRAD","TCGA-XJ-A83H-01A","14:AL121790.1:37564362:+:14:AL132857.2:36654749:+:rev","AL121790.1--AL132857.2","ENSG00000258414","ENSG00000283098",10.0,1.0,1.0,1.0,0.859,"NA"]
["TCGA_PRAD","TCGA-XJ-A9DX-01A","5:UBE2D2:139623461:+:5:C5orf66:135052454:+:rev","UBE2D2--C5orf66","ENSG00000131508","ENSG00000224186",2.0,1.0,1.0,1.0,0.925,0.0]
["TCGA_PRAD","TCGA-XK-AAIV-01A","8:PLEKHF2:95134030:+:8:NDUFAF6:95115536:+:rev","PLEKHF2--NDUFAF6","ENSG00000175895","ENSG00000156170",3.0,1.0,1.0,1.0,0.638,"NA"]
["TCGA_PRAD","TCGA-XK-AAJA-01A","5:APC:112707882:+:5:MCC:113151422:-:strandcross","APC--MCC","ENSG00000134982","ENSG00000171444",3.0,1.0,1.0,1.0,0.574,0.0040899795501]
["TCGA_PRAD","TCGA-XQ-A8TA-01A","2:GIGYF2:232796221:+:2:AC007563.2:216712380:+:rev","GIGYF2--AC007563.2","ENSG00000204120","ENSG00000236886",3.0,1.0,1.0,1.0,0.4,0.0]
["TCGA_PRAD","TCGA-XQ-A8TB-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",133.0,174.0,173.0,171.0,0.98340453560334,0.0]
["TCGA_PRAD","TCGA-YJ-A8SW-01A","21:TTC3:37172744:+:21:C21orf62-AS1:32885932:+:rev","TTC3--C21orf62-AS1","ENSG00000182670","ENSG00000205930",24.0,1.0,1.0,1.0,0.398197558434946,0.00945626477541]
["TCGA_PRAD","TCGA-YJ-A8SW-01A","19:EPS15L1:16471913:-:19:CPAMD8:16938446:-:rev","EPS15L1--CPAMD8","ENSG00000127527","ENSG00000160111",11.0,1.0,1.0,1.0,0.408,"NA"]
["TCGA_PRAD","TCGA-YL-A8HM-01A","9:ELAVL2:23821605:-:7:CFTR:117664688:+:fusion","ELAVL2--CFTR","ENSG00000107105","ENSG00000001626",7.0,1.0,1.0,1.0,0.774,0.00268096514745]
["TCGA_PRAD","TCGA-YL-A8SB-01A","8:MAF1:144106464:+:19:TMEM205:11345628:-:fusion","MAF1--TMEM205","ENSG00000179632","ENSG00000105518",16.0,1.0,1.0,1.0,0.418629396278155,0.00568181818182]
["TCGA_PRAD","TCGA-YL-A8SC-01A","3:NAALADL2:175324325:+:5:C1QTNF3-AMACR:34005899:-:fusion","NAALADL2--C1QTNF3-AMACR","ENSG00000177694","ENSG00000242110",3.0,2.0,2.0,2.0,0.951,0.0]
["TCGA_PRAD","TCGA-YL-A8SL-01B","1:CEP350:180078674:+:1:LEPROT:65431803:+:rev","CEP350--LEPROT","ENSG00000135837","ENSG00000213625",8.0,1.0,1.0,1.0,0.468,0.0]
["TCGA_PRAD","TCGA-YL-A9WH-01A","15:HERC1:63833822:-:14:SNX6:34563175:-:fusion","HERC1--SNX6","ENSG00000103657","ENSG00000129515",4.0,1.0,1.0,1.0,0.69,0.00301204819277]
["TCGA_PRAD","TCGA-YL-A9WL-01A","19:URI1:29942664:+:19:WDR88:33164197:+:reg","URI1--WDR88","ENSG00000105176","ENSG00000166359",22.0,1.0,1.0,1.0,0.86990126613499,0.00228832951945]
["TCGA_PRAD","TCGA-YL-A9WY-01A","19:RNF126:652826:-:19:ARHGAP35:46937264:+:strandcross","RNF126--ARHGAP35","ENSG00000070423","ENSG00000160007",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_PRAD","TCGA-ZG-A8QZ-01A","21:TMPRSS2:41508081:-:21:ERG:38445621:-:reg","TMPRSS2--ERG","ENSG00000184012","ENSG00000157554",96.0,174.0,173.0,171.0,0.604496731293625,0.00537634408602]
["TCGA_PRAD","TCGA-ZG-A9KY-01A","19:KDM4B:5047669:+:19:ATCAY:3902487:+:rev","KDM4B--ATCAY","ENSG00000127663","ENSG00000167654",5.0,1.0,1.0,1.0,0.933,0.0]
["TCGA_PRAD","TCGA-ZG-A9L1-01A","6:ARFGEF3:138263611:+:21:LINC00159:32086295:-:fusion","ARFGEF3--LINC00159","ENSG00000112379","ENSG00000230323",3.0,1.0,1.0,1.0,0.879,0.00534759358289]
["TCGA_PRAD","TCGA-ZG-A9L5-01A","15:MYO1E:59256284:-:9:C9orf3:95060694:+:fusion","MYO1E--C9orf3","ENSG00000157483","ENSG00000148120",32.0,1.0,1.0,1.0,0.882922074390256,0.00183823529412]
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["TCGA_PRAD","TCGA-ZG-A9LN-01A","3:HPS3:149163949:+:3:AC092958.1:148006588:+:rev","HPS3--AC092958.1","ENSG00000163755","ENSG00000239922",2.0,1.0,1.0,1.0,0.871,0.00367647058824]
["TCGA_PRAD","TCGA-ZG-A9LZ-01A","20:ZMYND8:47347856:-:17:RNF43:58371033:-:fusion","ZMYND8--RNF43","ENSG00000101040","ENSG00000108375",6.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_PRAD","TCGA-ZG-A9M4-01A","1:PIK3R3:46077515:-:17:MYO18A:29096915:-:fusion","PIK3R3--MYO18A","ENSG00000117461","ENSG00000196535",7.0,1.0,1.0,1.0,0.953,0.0]
["TCGA_READ","TCGA-AF-2693-01A","12:KRAS:25225614:-:12:SOX5-AS1:24237822:+:strandcross","KRAS--SOX5-AS1","ENSG00000133703","ENSG00000256120",8.0,1.0,1.0,1.0,0.245,0.014888337469]
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["TCGA_READ","TCGA-AG-3731-01A","3:TBL1XR1:177196340:-:17:STAT3:42348539:-:fusion","TBL1XR1--STAT3","ENSG00000177565","ENSG00000168610",3.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_READ","TCGA-AH-6643-01A","17:SMARCE1:40635931:-:17:RARA:40355263:+:strandcross","SMARCE1--RARA","ENSG00000073584","ENSG00000131759",511.0,1.0,1.0,1.0,0.710587328627168,0.0089552238806]
["TCGA_READ","TCGA-CI-6619-01B","17:IGF2BP1:49031973:+:17:BAIAP2:81099928:+:reg","IGF2BP1--BAIAP2","ENSG00000159217","ENSG00000175866",3.0,1.0,1.0,1.0,0.22,0.0302013422819]
["TCGA_READ","TCGA-DC-6158-01A","11:C2CD3:74042054:-:11:VPS37C:61138835:-:reg","C2CD3--VPS37C","ENSG00000168014","ENSG00000167987",7.0,1.0,1.0,1.0,0.501,0.013201320132]
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["TCGA_READ","TCGA-EI-6509-01A","17:SRCIN1:38604479:-:17:LASP1:38914325:+:strandcross","SRCIN1--LASP1","ENSG00000277363","ENSG00000002834",7.0,1.0,1.0,1.0,0.964,0.0]
["TCGA_READ","TCGA-EI-7002-01A","5:LHFPL2:78509784:-:6:PTPRK:128089992:-:fusion","LHFPL2--PTPRK","ENSG00000145685","ENSG00000152894",16.0,1.0,1.0,1.0,0.673742229928719,0.0]
["TCGA_READ","TCGA-F5-6811-01A","19:LGALS4:38806461:-:19:HNRNPL:38847434:-:rev","LGALS4--HNRNPL","ENSG00000171747","ENSG00000104824",2.0,1.0,1.0,1.0,0.851,"NA"]
["TCGA_SARC","TCGA-3B-A9HJ-01A","12:CNOT2:70278274:+:12:SLC16A7:59771219:+:rev","CNOT2--SLC16A7","ENSG00000111596","ENSG00000118596",2.0,1.0,1.0,1.0,0.61,0.00737100737101]
["TCGA_SARC","TCGA-3B-A9HL-01A","12:KIF21A:39319906:-:2:COPS7B:231791733:+:fusion","KIF21A--COPS7B","ENSG00000139116","ENSG00000144524",6.0,1.0,1.0,1.0,0.621,0.0140186915888]
["TCGA_SARC","TCGA-3B-A9HL-01A","17:PMP22:15259094:-:17:COX10-AS1:13880371:-:reg","PMP22--COX10-AS1","ENSG00000109099","ENSG00000236088",2.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","12:ALDH2:111775720:+:12:LIN7A:80848322:-:strandcross","ALDH2--LIN7A","ENSG00000111275","ENSG00000111052",2.0,1.0,1.0,1.0,0.918,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","12:FRS2:69532056:+:12:AVIL:57801212:-:strandcross","FRS2--AVIL","ENSG00000166225","ENSG00000135407",2.0,1.0,1.0,1.0,0.921,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","12:PPP1R12A:79934695:-:12:DNAH10:123818950:+:strandcross","PPP1R12A--DNAH10","ENSG00000058272","ENSG00000197653",5.0,1.0,1.0,1.0,0.897,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","22:SGSM1:24859840:+:22:GAL3ST1:30557401:-:strandcross","SGSM1--GAL3ST1","ENSG00000167037","ENSG00000128242",6.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_SARC","TCGA-3B-A9HR-01A","17:CTC1:8248004:-:3:AC092902.2:125848447:-:fusion","CTC1--AC092902.2","ENSG00000178971","ENSG00000241288",64.0,1.0,1.0,1.0,0.917578852080154,0.0]
["TCGA_SARC","TCGA-3B-A9HS-01A","12:CDK17:96334719:-:12:AC007298.1:96027398:+:strandcross","CDK17--AC007298.1","ENSG00000059758","ENSG00000257715",23.0,1.0,1.0,1.0,0.893168778104983,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","12:LRP1:57175705:+:12:DAZAP2:51246061:+:rev","LRP1--DAZAP2","ENSG00000123384","ENSG00000183283",4.0,1.0,1.0,1.0,0.842,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","14:CHGA:92932851:+:12:AC025569.1:70527675:+:fusion","CHGA--AC025569.1","ENSG00000100604","ENSG00000258168",3.0,1.0,1.0,1.0,0.909,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","19:INSR:7163032:-:12:AC025263.1:69715587:-:fusion","INSR--AC025263.1","ENSG00000171105","ENSG00000247131",97.0,1.0,1.0,1.0,0.832953516800577,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","6:AL158850.1:139271858:+:5:PTTG1:160427715:+:fusion","AL158850.1--PTTG1","ENSG00000226571","ENSG00000164611",12.0,1.0,1.0,1.0,0.968,0.00292397660819]
["TCGA_SARC","TCGA-3B-A9HV-01A","9:C9orf3:95060810:+:3:LINC02044:113144335:-:fusion","C9orf3--LINC02044","ENSG00000148120","ENSG00000243795",19.0,1.0,1.0,1.0,0.797868734569442,0.00706713780919]
["TCGA_SARC","TCGA-3B-A9HX-01A","19:ZNF569:37444907:-:19:AC012313.3:58359323:-:rev","ZNF569--AC012313.3","ENSG00000196437","ENSG00000268230",2.0,1.0,1.0,1.0,0.732,0.00862068965517]
["TCGA_SARC","TCGA-DX-A1KU-01A","11:EIF3M:32596047:+:11:UEVLD:18570377:-:strandcross","EIF3M--UEVLD","ENSG00000149100","ENSG00000151116",29.0,1.0,1.0,1.0,0.934710385376481,0.0]
["TCGA_SARC","TCGA-DX-A1KU-01A","12:LRIG3:58874055:-:12:SLC16A7:59771219:+:strandcross","LRIG3--SLC16A7","ENSG00000139263","ENSG00000118596",23.0,1.0,1.0,1.0,0.774485695472886,0.015444015444]
["TCGA_SARC","TCGA-DX-A1KU-01A","3:EPHA3:89107836:+:3:ZNF654:88113115:+:rev","EPHA3--ZNF654","ENSG00000044524","ENSG00000175105",2.0,1.0,1.0,1.0,0.847,"NA"]
["TCGA_SARC","TCGA-DX-A1KW-01A","12:HECTD4:112381952:-:12:AMDHD1:95966348:+:strandcross","HECTD4--AMDHD1","ENSG00000173064","ENSG00000139344",76.0,1.0,1.0,1.0,0.175546336606509,0.0230414746544]
["TCGA_SARC","TCGA-DX-A1KX-01A","19:ZNF98:22514364:-:20:ACTR5:38771559:+:fusion","ZNF98--ACTR5","ENSG00000197360","ENSG00000101442",10.0,1.0,1.0,1.0,0.504,0.00510204081633]
["TCGA_SARC","TCGA-DX-A1KY-01A","1:ASH1L:155562779:-:1:SELL:169691802:-:rev","ASH1L--SELL","ENSG00000116539","ENSG00000188404",7.0,1.0,1.0,1.0,0.521,0.0143884892086]
["TCGA_SARC","TCGA-DX-A1KY-01A","9:GALT:34648456:+:15:WDR72:53597274:-:fusion","GALT--WDR72","ENSG00000213930","ENSG00000166415",5.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_SARC","TCGA-DX-A1KZ-01A","12:AC025165.3:57773128:+:12:PTPRR:70764778:-:strandcross","AC025165.3--PTPRR","ENSG00000123427","ENSG00000153233",33.0,1.0,1.0,1.0,0.899801112866276,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","12:TM7SF3:26990450:-:12:KCNC2:75051317:-:rev","TM7SF3--KCNC2","ENSG00000064115","ENSG00000166006",27.0,1.0,1.0,1.0,0.897875326401566,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","5:ANKH:14871352:-:8:ZFPM2:104714846:+:fusion","ANKH--ZFPM2","ENSG00000154122","ENSG00000169946",1.0,1.0,1.0,1.0,0.88,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","9:PTCH1:95506407:-:9:IPPK:92619565:-:reg","PTCH1--IPPK","ENSG00000185920","ENSG00000127080",11.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_SARC","TCGA-DX-A1L0-01A","12:SLC16A7:59775475:+:12:AC127894.1:69222494:+:reg","SLC16A7--AC127894.1","ENSG00000118596","ENSG00000258140",35.0,1.0,1.0,1.0,0.15260086420176,0.0416666666667]
["TCGA_SARC","TCGA-DX-A1L0-01A","6:TIAM2:155165409:+:6:PPIL4:149505704:-:strandcross","TIAM2--PPIL4","ENSG00000146426","ENSG00000131013",3.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_SARC","TCGA-DX-A1L2-01A","1:ARHGEF11:157044299:-:1:CD48:160685189:-:rev","ARHGEF11--CD48","ENSG00000132694","ENSG00000117091",28.0,1.0,1.0,1.0,0.829219366493308,0.0104529616725]
["TCGA_SARC","TCGA-DX-A1L2-01A","7:LINC-PINT:131052425:-:1:CCT3:156335888:-:fusion","LINC-PINT--CCT3","ENSG00000231721","ENSG00000163468",28.0,1.0,1.0,1.0,0.59822367904084,0.01393728223]
["TCGA_SARC","TCGA-DX-A1L3-01A","12:SLC35E3:68752190:+:12:MYRFL:69952113:+:reg","SLC35E3--MYRFL","ENSG00000175782","ENSG00000166268",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_SARC","TCGA-DX-A1L3-01A","5:CDH18:19981060:-:12:AC020637.1:58801260:+:fusion","CDH18--AC020637.1","ENSG00000145526","ENSG00000258231",3.0,1.0,1.0,1.0,0.264,0.0117994100295]
["TCGA_SARC","TCGA-DX-A1L4-01A","12:FRS2:69470530:+:12:STAB2:103648690:+:reg","FRS2--STAB2","ENSG00000166225","ENSG00000136011",2.0,1.0,1.0,1.0,0.827,0.0031847133758]
["TCGA_SARC","TCGA-DX-A1L4-01A","12:TMTC2:82687669:+:15:HERC1:63664594:-:fusion","TMTC2--HERC1","ENSG00000179104","ENSG00000103657",3.0,1.0,1.0,1.0,0.882,0.0031847133758]
["TCGA_SARC","TCGA-DX-A23R-01A","11:CDON:125983872:-:9:SETX:132264985:-:fusion","CDON--SETX","ENSG00000064309","ENSG00000107290",2.0,1.0,1.0,1.0,0.934,0.00595238095238]
["TCGA_SARC","TCGA-DX-A23R-01A","12:MDM2:68836749:+:12:LINC00615:90940149:+:reg","MDM2--LINC00615","ENSG00000135679","ENSG00000196243",7.0,1.0,1.0,1.0,0.904,0.00595238095238]
["TCGA_SARC","TCGA-DX-A23R-01A","12:NAV3:77831704:+:12:AC008035.1:46652390:+:rev","NAV3--AC008035.1","ENSG00000067798","ENSG00000272369",3.0,1.0,1.0,1.0,0.723,0.00892857142857]
["TCGA_SARC","TCGA-DX-A23R-01A","1:CDC73:193236356:+:1:SWT1:185184243:+:rev","CDC73--SWT1","ENSG00000134371","ENSG00000116668",10.0,1.0,1.0,1.0,0.973,0.00297619047619]
["TCGA_SARC","TCGA-DX-A23T-01A","6:TBPL1:133982880:+:6:TDRG1:40379282:+:rev","TBPL1--TDRG1","ENSG00000028839","ENSG00000204091",19.0,1.0,1.0,1.0,0.796472609094701,0.0]
["TCGA_SARC","TCGA-DX-A23U-01A","1:DAB1:57290964:-:1:TMEM59:54041805:-:reg","DAB1--TMEM59","ENSG00000173406","ENSG00000116209",5.0,1.0,1.0,1.0,0.919,0.00234741784038]
["TCGA_SARC","TCGA-DX-A23V-01A","12:AC025165.3:57773128:+:12:LTA4H:96024547:-:strandcross","AC025165.3--LTA4H","ENSG00000123427","ENSG00000111144",12.0,1.0,1.0,1.0,0.308,0.00205338809035]
["TCGA_SARC","TCGA-DX-A23Y-01A","12:ACSS3:81109704:+:12:KRT77:52697896:-:strandcross","ACSS3--KRT77","ENSG00000111058","ENSG00000189182",620.0,1.0,1.0,1.0,0.893682390615253,0.00222222222222]
["TCGA_SARC","TCGA-DX-A23Y-01A","14:TRMT61A:103532848:+:12:NDUFA12:94994257:-:fusion","TRMT61A--NDUFA12","ENSG00000166166","ENSG00000184752",55.0,1.0,1.0,1.0,0.863438596777552,0.00222222222222]
["TCGA_SARC","TCGA-DX-A23Y-01A","6:TTK:80011548:+:6:TMEM63B:44151846:+:rev","TTK--TMEM63B","ENSG00000112742","ENSG00000137216",18.0,1.0,1.0,1.0,0.828638574889839,0.00222222222222]
["TCGA_SARC","TCGA-DX-A23Z-01A","6:SASH1:148544818:+:12:AC083805.1:57886696:-:fusion","SASH1--AC083805.1","ENSG00000111961","ENSG00000245651",4.0,1.0,1.0,1.0,0.95,0.0]
["TCGA_SARC","TCGA-DX-A240-01A","1:KIRREL:157993728:+:12:PLBD1-AS1:14612879:+:fusion","KIRREL--PLBD1-AS1","ENSG00000183853","ENSG00000256751",24.0,1.0,1.0,1.0,0.679482625204056,0.00589970501475]
["TCGA_SARC","TCGA-DX-A2IZ-01A","12:CPSF6:69262562:+:5:CLPTM1L:1318453:-:fusion","CPSF6--CLPTM1L","ENSG00000111605","ENSG00000049656",2.0,2.0,1.0,1.0,0.689,0.00108695652174]
["TCGA_SARC","TCGA-DX-A2J0-01A","12:CPSF6:69262562:+:12:TMBIM4:66153448:-:strandcross","CPSF6--TMBIM4","ENSG00000111605","ENSG00000228144",4.0,5.0,5.0,2.0,0.157,0.0042689434365]
["TCGA_SARC","TCGA-DX-A2J1-01A","12:ORMDL2:55818112:+:12:SARNP:55757553:-:strandcross","ORMDL2--SARNP","ENSG00000123353","ENSG00000205323",251.0,1.0,1.0,1.0,0.999528615108017,0.0]
["TCGA_SARC","TCGA-DX-A2J4-01A","19:UHRF1:4930876:+:12:AC069228.1:81417298:+:fusion","UHRF1--AC069228.1","ENSG00000276043","ENSG00000258162",4.0,1.0,1.0,1.0,0.953,0.0]
["TCGA_SARC","TCGA-DX-A3LS-01A","12:CCDC92:123942744:-:6:MAN1A1:119302103:-:fusion","CCDC92--MAN1A1","ENSG00000119242","ENSG00000111885",3.0,1.0,1.0,1.0,0.973,0.00425531914894]
["TCGA_SARC","TCGA-DX-A3LS-01A","12:MPHOSPH9:123210056:-:12:ELK3:96246940:+:strandcross","MPHOSPH9--ELK3","ENSG00000051825","ENSG00000111145",12.0,1.0,1.0,1.0,0.648,0.0063829787234]
["TCGA_SARC","TCGA-DX-A3LS-01A","6:CEP85L:118565529:-:12:WASHC3:102046119:-:fusion","CEP85L--WASHC3","ENSG00000111860","ENSG00000120860",20.0,1.0,1.0,1.0,0.799078332267001,0.0063829787234]
["TCGA_SARC","TCGA-DX-A3LT-01A","11:FAR1:13700492:+:3:PQLC2L:157553230:+:fusion","FAR1--PQLC2L","ENSG00000197601","ENSG00000174899",68.0,1.0,1.0,1.0,0.964809356923621,0.0]
["TCGA_SARC","TCGA-DX-A3LU-01A","4:DHX15:24541873:-:6:CCND3:41940585:-:fusion","DHX15--CCND3","ENSG00000109606","ENSG00000112576",3.0,1.0,1.0,1.0,0.918,0.0]
["TCGA_SARC","TCGA-DX-A3LY-01B","12:ANKRD52:56244353:-:12:AC020637.1:58805941:+:strandcross","ANKRD52--AC020637.1","ENSG00000139645","ENSG00000258231",4.0,1.0,1.0,1.0,0.86,0.0066889632107]
["TCGA_SARC","TCGA-DX-A3LY-01B","7:KLHDC10:130070809:+:9:PLGRKT:5361888:-:fusion","KLHDC10--PLGRKT","ENSG00000128607","ENSG00000107020",3.0,1.0,1.0,1.0,0.741,0.0]
["TCGA_SARC","TCGA-DX-A3M1-01A","12:MRPL42:93467554:+:12:NTN4:95738144:-:strandcross","MRPL42--NTN4","ENSG00000198015","ENSG00000074527",11.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_SARC","TCGA-DX-A3M1-01A","17:TANC2:63099246:+:17:CASC17:71185655:-:strandcross","TANC2--CASC17","ENSG00000170921","ENSG00000260785",7.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_SARC","TCGA-DX-A3M1-01A","9:CRAT:129097250:-:9:TTLL11-IT1:121885575:-:reg","CRAT--TTLL11-IT1","ENSG00000095321","ENSG00000237548",256.0,1.0,1.0,1.0,0.341143887567837,0.0106382978723]
["TCGA_SARC","TCGA-DX-A3U5-01A","12:CSRP2:76878938:-:12:AC025575.1:71046741:-:reg","CSRP2--AC025575.1","ENSG00000175183","ENSG00000257454",86.0,1.0,1.0,1.0,0.453701426075954,0.0112359550562]
["TCGA_SARC","TCGA-DX-A3U5-01A","12:MDM1:68313443:-:12:PDZRN4:41506456:+:strandcross","MDM1--PDZRN4","ENSG00000111554","ENSG00000165966",3.0,1.0,1.0,1.0,0.813,0.00280898876404]
["TCGA_SARC","TCGA-DX-A3U5-01A","6:GRM1:146399699:+:12:CNOT2:70319298:+:fusion","GRM1--CNOT2","ENSG00000152822","ENSG00000111596",8.0,1.0,1.0,1.0,0.399,0.0112359550562]
["TCGA_SARC","TCGA-DX-A3U7-01A","19:ZNF793:37523454:+:3:ST3GAL6:98820788:+:fusion","ZNF793--ST3GAL6","ENSG00000188227","ENSG00000064225",6.0,1.0,1.0,1.0,0.982,0.0]
["TCGA_SARC","TCGA-DX-A3UA-01A","4:SETD7:139517885:-:3:ACAD11:132644896:-:fusion","SETD7--ACAD11","ENSG00000145391","ENSG00000240303",11.0,1.0,1.0,1.0,0.61,0.00523560209424]
["TCGA_SARC","TCGA-DX-A48L-01A","13:GGACT:100583825:-:17:INCA1:4990265:-:fusion","GGACT--INCA1","ENSG00000134864","ENSG00000196388",2.0,1.0,1.0,1.0,0.708,0.0122324159021]
["TCGA_SARC","TCGA-DX-A48N-01A","12:NAV3:78190219:+:1:RGL1:183847566:+:fusion","NAV3--RGL1","ENSG00000067798","ENSG00000143344",3.0,1.0,1.0,1.0,0.914,0.00763358778626]
["TCGA_SARC","TCGA-DX-A48N-01A","1:COLGALT2:184037095:-:4:LINC00682:41873201:-:fusion","COLGALT2--LINC00682","ENSG00000198756","ENSG00000245870",12.0,1.0,1.0,1.0,0.956,0.00508905852417]
["TCGA_SARC","TCGA-DX-A48N-01A","9:TMEM2:71694509:-:1:HMCN1:185909337:+:fusion","TMEM2--HMCN1","ENSG00000135048","ENSG00000143341",6.0,1.0,1.0,1.0,0.992,0.00508905852417]
["TCGA_SARC","TCGA-DX-A6B9-01A","7:HSPB1:76303076:+:2:DES:219425663:+:fusion","HSPB1--DES","ENSG00000106211","ENSG00000175084",2.0,2.0,1.0,1.0,0.906,0.00789473684211]
["TCGA_SARC","TCGA-DX-A6BE-01A","19:ZNF562:9675015:-:14:TEP1:20408463:-:fusion","ZNF562--TEP1","ENSG00000171466","ENSG00000129566",3.0,1.0,1.0,1.0,0.84,0.003861003861]
["TCGA_SARC","TCGA-DX-A6BG-01A","12:AGAP2:57731366:-:12:CNOT2:70335438:+:strandcross","AGAP2--CNOT2","ENSG00000135439","ENSG00000111596",5.0,1.0,1.0,1.0,0.365,0.00484261501211]
["TCGA_SARC","TCGA-DX-A6BG-01A","12:UHRF1BP1L:100142592:-:16:CACNG3:24361352:+:fusion","UHRF1BP1L--CACNG3","ENSG00000111647","ENSG00000006116",9.0,1.0,1.0,1.0,0.907,0.0]
["TCGA_SARC","TCGA-DX-A6BH-01A","12:FRS2:69532056:+:6:AKAP12:151305747:+:fusion","FRS2--AKAP12","ENSG00000166225","ENSG00000131016",53.0,1.0,1.0,1.0,0.963551474010976,0.0]
["TCGA_SARC","TCGA-DX-A6BH-01A","6:TRERF1:42451177:-:6:ADGRF2:47673391:+:strandcross","TRERF1--ADGRF2","ENSG00000124496","ENSG00000164393",17.0,1.0,1.0,1.0,0.891681512090385,0.0031847133758]
["TCGA_SARC","TCGA-DX-A6BH-01A","7:SRI:88210882:-:12:PIP4K2C:57594025:+:fusion","SRI--PIP4K2C","ENSG00000075142","ENSG00000166908",353.0,1.0,1.0,1.0,0.600103935808396,0.00636942675159]
["TCGA_SARC","TCGA-DX-A6YS-01A","14:EIF5:103341125:+:14:CTAGE5:39326864:+:rev","EIF5--CTAGE5","ENSG00000100664","ENSG00000258941",9.0,1.0,1.0,1.0,0.355,0.0138888888889]
["TCGA_SARC","TCGA-DX-A6YV-01A","1:IFI16:159016700:+:1:UAP1:162576777:+:reg","IFI16--UAP1","ENSG00000163565","ENSG00000117143",35.0,1.0,1.0,1.0,0.888738773741494,0.0]
["TCGA_SARC","TCGA-DX-A6YZ-01A","15:SMAD3:67138100:+:12:AC136188.1:73913957:+:fusion","SMAD3--AC136188.1","ENSG00000166949","ENSG00000257587",5.0,1.0,1.0,1.0,0.16,0.0231884057971]
["TCGA_SARC","TCGA-DX-A7EF-01A","5:TRIO:14420021:+:5:TERT:1282624:-:strandcross","TRIO--TERT","ENSG00000038382","ENSG00000164362",30.0,2.0,2.0,2.0,0.894696243375082,0.0]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:FRS2:69470530:+:12:TBK1:64466901:+:rev","FRS2--TBK1","ENSG00000166225","ENSG00000183735",50.0,1.0,1.0,1.0,0.861644738476624,0.00378787878788]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:FRS2:69470530:+:12:TBK1:64474230:+:rev","FRS2--TBK1","ENSG00000166225","ENSG00000183735",9.0,1.0,1.0,1.0,0.411,0.00568181818182]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:RAB3IP:69756663:+:12:AC025575.2:71047679:-:strandcross","RAB3IP--AC025575.2","ENSG00000127328","ENSG00000258053",12.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SARC","TCGA-DX-A7EI-01A","5:FBXL7:15616072:+:5:CDH10:24593613:-:strandcross","FBXL7--CDH10","ENSG00000183580","ENSG00000040731",13.0,1.0,1.0,1.0,0.307,0.0113636363636]
["TCGA_SARC","TCGA-DX-A7ES-01A","12:AC090502.1:74157790:-:12:BTBD11:107543935:+:strandcross","AC090502.1--BTBD11","ENSG00000251138","ENSG00000151136",5.0,1.0,1.0,1.0,0.507,0.008356545961]
["TCGA_SARC","TCGA-DX-A7EU-01A","14:CHD8:21456032:-:8:TG:133133470:+:fusion","CHD8--TG","ENSG00000100888","ENSG00000042832",5.0,1.0,1.0,1.0,0.913,0.0046511627907]
["TCGA_SARC","TCGA-DX-A8BH-01A","3:DLG1:197194425:-:3:FAIM:138621407:+:strandcross","DLG1--FAIM","ENSG00000075711","ENSG00000158234",5.0,1.0,1.0,1.0,0.895,0.0]
["TCGA_SARC","TCGA-DX-A8BL-01A","17:KANSL1:46066537:-:2:AC108025.1:5649911:-:fusion","KANSL1--AC108025.1","ENSG00000120071","ENSG00000230090",5.0,1.0,1.0,1.0,0.906,0.0]
["TCGA_SARC","TCGA-DX-A8BL-01A","19:GATAD2A:19406019:+:19:KXD1:18562036:+:rev","GATAD2A--KXD1","ENSG00000167491","ENSG00000105700",4.0,1.0,1.0,1.0,0.656,"NA"]
["TCGA_SARC","TCGA-DX-A8BM-01A","2:SEPT10:109585721:-:13:LRCH1:46681741:+:fusion","SEPT10--LRCH1","ENSG00000186522","ENSG00000136141",14.0,1.0,1.0,1.0,0.566,0.0103092783505]
["TCGA_SARC","TCGA-DX-A8BR-01A","7:AGAP3:151087072:+:4:EXOSC9:121801827:+:fusion","AGAP3--EXOSC9","ENSG00000133612","ENSG00000123737",67.0,1.0,1.0,1.0,0.953583392599157,0.0]
["TCGA_SARC","TCGA-DX-A8BU-01A","10:ATAD1:87784470:-:10:LRMDA:76557209:+:strandcross","ATAD1--LRMDA","ENSG00000138138","ENSG00000148655",38.0,1.0,1.0,1.0,0.345839457540907,0.0377358490566]
["TCGA_SARC","TCGA-DX-A8BU-01A","4:NFKB1:102594981:+:4:BANK1:102063075:+:rev","NFKB1--BANK1","ENSG00000109320","ENSG00000153064",11.0,1.0,1.0,1.0,0.719,"NA"]
["TCGA_SARC","TCGA-DX-AATS-01A","18:DYM:49460398:-:12:OAS3:112941570:+:fusion","DYM--OAS3","ENSG00000141627","ENSG00000111331",6.0,1.0,1.0,1.0,0.926,0.0128205128205]
["TCGA_SARC","TCGA-DX-AATS-01A","15:NEO1:73136027:+:15:BBS4:72709700:+:rev","NEO1--BBS4","ENSG00000067141","ENSG00000140463",1.0,1.0,1.0,1.0,0.879,"NA"]
["TCGA_SARC","TCGA-DX-AB2F-01A","12:MYRFL:69910930:+:12:AC025575.2:71047679:-:strandcross","MYRFL--AC025575.2","ENSG00000166268","ENSG00000258053",2.0,1.0,1.0,1.0,0.252,0.0125]
["TCGA_SARC","TCGA-DX-AB2G-01A","12:DIP2B:50660319:+:12:R3HDM2:57299478:-:strandcross","DIP2B--R3HDM2","ENSG00000066084","ENSG00000179912",3.0,1.0,1.0,1.0,0.27,0.0200668896321]
["TCGA_SARC","TCGA-DX-AB2G-01A","12:SP1:53383622:+:12:AC023509.3:53507142:-:strandcross","SP1--AC023509.3","ENSG00000185591","ENSG00000267281",92.0,1.0,1.0,1.0,0.983858575400248,0.0]
["TCGA_SARC","TCGA-DX-AB2H-01A","12:MSRB3:65278865:+:12:CNOT2:70335438:+:reg","MSRB3--CNOT2","ENSG00000174099","ENSG00000111596",507.0,1.0,1.0,1.0,0.999999553876785,0.0]
["TCGA_SARC","TCGA-DX-AB2O-01A","12:NEDD1:96907300:+:14:GPHN:66965191:+:fusion","NEDD1--GPHN","ENSG00000139350","ENSG00000171723",3.0,1.0,1.0,1.0,0.846,0.00308641975309]
["TCGA_SARC","TCGA-DX-AB2O-01A","2:SESTD1:179264499:-:3:LINC02070:86495791:+:fusion","SESTD1--LINC02070","ENSG00000187231","ENSG00000241328",69.0,1.0,1.0,1.0,0.978814818580536,0.0]
["TCGA_SARC","TCGA-DX-AB2P-01A","1:KAZN:14180592:+:1:PHGDH:119721170:+:reg","KAZN--PHGDH","ENSG00000189337","ENSG00000092621",9.0,1.0,1.0,1.0,0.454,0.0156862745098]
["TCGA_SARC","TCGA-DX-AB2S-01A","1:DAP3:155717128:+:1:RPRD2:150470561:+:rev","DAP3--RPRD2","ENSG00000132676","ENSG00000163125",8.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_SARC","TCGA-DX-AB2V-01A","1:RGL1:183636501:+:1:NMNAT2:183278629:-:strandcross","RGL1--NMNAT2","ENSG00000143344","ENSG00000157064",24.0,1.0,1.0,1.0,0.803513386794858,0.00990099009901]
["TCGA_SARC","TCGA-DX-AB2Z-01A","18:CTIF:48539831:+:14:AJUBA:22978445:-:fusion","CTIF--AJUBA","ENSG00000134030","ENSG00000129474",27.0,1.0,1.0,1.0,0.903420406759163,0.0]
["TCGA_SARC","TCGA-DX-AB35-01A","12:FAM19A2:62191259:-:12:KRR1:75508446:-:rev","FAM19A2--KRR1","ENSG00000198673","ENSG00000111615",5.0,1.0,1.0,1.0,0.393,0.0144927536232]
["TCGA_SARC","TCGA-DX-AB35-01A","17:LRRC75A-AS1:16441130:+:12:AC129102.1:20361834:-:fusion","LRRC75A-AS1--AC129102.1","ENSG00000175061","ENSG00000256879",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_SARC","TCGA-DX-AB36-01A","12:ELK3:96223773:+:1:LINC01358:59103512:+:fusion","ELK3--LINC01358","ENSG00000111145","ENSG00000237352",269.0,1.0,1.0,1.0,0.885116384713028,0.0276243093923]
["TCGA_SARC","TCGA-DX-AB36-01A","1:NEGR1:72282319:-:1:ZFYVE9:52216369:+:strandcross","NEGR1--ZFYVE9","ENSG00000172260","ENSG00000157077",15.0,1.0,1.0,1.0,0.737,0.0331491712707]
["TCGA_SARC","TCGA-DX-AB3A-01A","12:AC025165.3:57773128:+:12:RAP1B:68659280:+:reg","AC025165.3--RAP1B","ENSG00000123427","ENSG00000127314",9.0,1.0,1.0,1.0,0.341,0.0188679245283]
["TCGA_SARC","TCGA-DX-AB3A-01A","1:CACHD1:64641969:+:17:USP32:60345608:-:fusion","CACHD1--USP32","ENSG00000158966","ENSG00000170832",4.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_SARC","TCGA-FX-A2QS-01A","11:ETS1:128521913:-:8:UBE2V2:48049853:+:fusion","ETS1--UBE2V2","ENSG00000134954","ENSG00000169139",10.0,1.0,1.0,1.0,0.864,0.00571428571429]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:HMGA2:65838569:+:12:AC087798.1:84294310:+:reg","HMGA2--AC087798.1","ENSG00000149948","ENSG00000257729",2.0,1.0,1.0,1.0,0.992,0.00285714285714]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:PPFIA2:81753973:-:12:HMGA2:65838519:+:strandcross","PPFIA2--HMGA2","ENSG00000139220","ENSG00000149948",3.0,1.0,1.0,1.0,0.175,0.0457142857143]
["TCGA_SARC","TCGA-FX-A2QS-01A","19:ZNF146:36218195:+:17:ABCA9:68996014:-:fusion","ZNF146--ABCA9","ENSG00000167635","ENSG00000154258",6.0,1.0,1.0,1.0,0.897,0.00285714285714]
["TCGA_SARC","TCGA-FX-A2QS-01A","4:LRBA:150915608:-:4:AC004053.1:104746680:-:reg","LRBA--AC004053.1","ENSG00000198589","ENSG00000248242",2.0,1.0,1.0,1.0,0.679,0.0114285714286]
["TCGA_SARC","TCGA-FX-A2QS-01A","7:TAX1BP1:27787603:+:12:SYT1:79217503:+:fusion","TAX1BP1--SYT1","ENSG00000106052","ENSG00000067715",6.0,1.0,1.0,1.0,0.416,0.0228571428571]
["TCGA_SARC","TCGA-FX-A3NK-01A","12:CCT2:69600004:+:12:OSBPL8:76487618:-:strandcross","CCT2--OSBPL8","ENSG00000166226","ENSG00000091039",9.0,1.0,1.0,1.0,0.524,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3NK-01A","12:NAV3:77831704:+:12:OSBPL8:76487618:-:strandcross","NAV3--OSBPL8","ENSG00000067798","ENSG00000091039",2.0,1.0,1.0,1.0,0.837,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3NK-01A","6:CD164:109376074:-:12:AC024909.1:89051267:-:fusion","CD164--AC024909.1","ENSG00000135535","ENSG00000257156",2.0,1.0,1.0,1.0,0.451,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3RE-01A","7:DOCK4:111736917:-:7:SND1:128074502:+:strandcross","DOCK4--SND1","ENSG00000128512","ENSG00000197157",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_SARC","TCGA-FX-A3TO-01A","15:DPP8:65474209:-:15:TRPM1:31035674:-:reg","DPP8--TRPM1","ENSG00000074603","ENSG00000134160",11.0,1.0,1.0,1.0,0.781,0.00706713780919]
["TCGA_SARC","TCGA-FX-A3TO-01A","17:PLXDC1:39151362:-:17:AC113554.2:63488648:+:strandcross","PLXDC1--AC113554.2","ENSG00000161381","ENSG00000159640",10.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SARC","TCGA-FX-A48G-01A","19:SMARCA4:11041560:+:22:TTC28-AS1:27985692:+:fusion","SMARCA4--TTC28-AS1","ENSG00000127616","ENSG00000235954",11.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_SARC","TCGA-HB-A2OT-01A","4:EVC2:5697593:-:9:AL589642.2:32643743:-:fusion","EVC2--AL589642.2","ENSG00000173040","ENSG00000230516",7.0,1.0,1.0,1.0,0.935,0.00306748466258]
["TCGA_SARC","TCGA-HB-A2OT-01A","9:IGFBPL1:38413237:-:9:FAM214B:35108737:-:reg","IGFBPL1--FAM214B","ENSG00000137142","ENSG00000005238",3.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_SARC","TCGA-HB-A3YV-01A","12:TBC1D30:64828509:+:X:PLP1:103776853:+:fusion","TBC1D30--PLP1","ENSG00000111490","ENSG00000123560",2.0,1.0,1.0,1.0,0.74,0.00255102040816]
["TCGA_SARC","TCGA-HB-A3YV-01A","4:MAML3:139889357:-:6:CCDC170:151548304:+:fusion","MAML3--CCDC170","ENSG00000196782","ENSG00000120262",9.0,1.0,1.0,1.0,0.738,0.00255102040816]
["TCGA_SARC","TCGA-HB-A3YV-01A","6:PNISR:99412551:-:6:PLEKHG1:150733584:+:strandcross","PNISR--PLEKHG1","ENSG00000132424","ENSG00000120278",3.0,1.0,1.0,1.0,0.863,0.00255102040816]
["TCGA_SARC","TCGA-HB-A3YV-01A","6:UTRN:144291907:+:6:Z86062.2:100427118:+:rev","UTRN--Z86062.2","ENSG00000152818","ENSG00000228082",7.0,1.0,1.0,1.0,0.832,0.00255102040816]
["TCGA_SARC","TCGA-HS-A5N7-01A","16:NUDT21:56439657:-:16:BBS2:56484867:-:rev","NUDT21--BBS2","ENSG00000167005","ENSG00000125124",135.0,1.0,1.0,1.0,0.976224560939789,"NA"]
["TCGA_SARC","TCGA-IE-A3OV-01A","17:ACACA:37121355:-:17:CCL5:35875642:-:reg","ACACA--CCL5","ENSG00000278540","ENSG00000271503",4.0,1.0,1.0,1.0,0.921,0.0054347826087]
["TCGA_SARC","TCGA-IE-A3OV-01A","3:KLHL24:183651276:+:2:MARCH7:159762880:+:fusion","KLHL24--MARCH7","ENSG00000114796","ENSG00000136536",11.0,1.0,1.0,1.0,0.976,0.00271739130435]
["TCGA_SARC","TCGA-IF-A3RQ-01A","12:CNOT2:70278274:+:12:ZDHHC17:76842025:+:reg","CNOT2--ZDHHC17","ENSG00000111596","ENSG00000186908",4.0,1.0,1.0,1.0,0.884,0.0028328611898]
["TCGA_SARC","TCGA-IF-A3RQ-01A","6:UTRN:144700243:+:12:HMGA2:65838519:+:fusion","UTRN--HMGA2","ENSG00000152818","ENSG00000149948",9.0,1.0,1.0,1.0,0.75,0.0056657223796]
["TCGA_SARC","TCGA-IS-A3K7-01A","12:KDM2B:121439857:-:12:CORO1C:108701323:-:reg","KDM2B--CORO1C","ENSG00000089094","ENSG00000110880",3.0,1.0,1.0,1.0,0.839,0.00199600798403]
["TCGA_SARC","TCGA-JV-A5VE-01A","12:AEBP2:19493986:+:12:LMO3:16600868:-:strandcross","AEBP2--LMO3","ENSG00000139154","ENSG00000048540",8.0,1.0,1.0,1.0,0.909,0.00164203612479]
["TCGA_SARC","TCGA-JV-A75J-01A","7:EIF2AK1:6054546:-:7:PHF14:11051612:+:strandcross","EIF2AK1--PHF14","ENSG00000086232","ENSG00000106443",19.0,1.0,1.0,1.0,0.804219520556986,0.00501253132832]
["TCGA_SARC","TCGA-K1-A3PO-01A","2:TTC7A:47060971:+:2:LINC01119:46855923:+:rev","TTC7A--LINC01119","ENSG00000068724","ENSG00000239332",1.0,1.0,1.0,1.0,0.925,"NA"]
["TCGA_SARC","TCGA-K1-A6RT-01A","1:VPS45:150072226:+:1:PSMB4:151401817:+:reg","VPS45--PSMB4","ENSG00000136631","ENSG00000159377",7.0,1.0,1.0,1.0,0.156,0.0249632892805]
["TCGA_SARC","TCGA-K1-A6RU-01A","12:CORO1C:108701124:-:16:RBFOX1:7518147:+:fusion","CORO1C--RBFOX1","ENSG00000110880","ENSG00000078328",10.0,1.0,1.0,1.0,0.642,0.00182149362477]
["TCGA_SARC","TCGA-K1-A6RV-01A","11:NTM:131911648:+:11:SORL1:121605113:+:rev","NTM--SORL1","ENSG00000182667","ENSG00000137642",10.0,1.0,1.0,1.0,0.202,0.0187969924812]
["TCGA_SARC","TCGA-KD-A5QT-01A","17:ARHGAP44:12919831:+:17:ZSWIM7:15981144:-:strandcross","ARHGAP44--ZSWIM7","ENSG00000006740","ENSG00000214941",3.0,1.0,1.0,1.0,0.238,0.0450160771704]
["TCGA_SARC","TCGA-KF-A41W-01A","8:SLC39A14:22367408:+:19:IL4I1:49896053:-:fusion","SLC39A14--IL4I1","ENSG00000104635","ENSG00000104951",8.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_SARC","TCGA-LI-A9QH-01A","19:ZNF507:32360618:+:19:FXYD1:35140076:+:reg","ZNF507--FXYD1","ENSG00000168813","ENSG00000266964",13.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_SARC","TCGA-MB-A8JL-01A","12:LRIG3:58913982:-:12:ATP23:57946995:+:strandcross","LRIG3--ATP23","ENSG00000139263","ENSG00000166896",8.0,1.0,1.0,1.0,0.712,0.00280112044818]
["TCGA_SARC","TCGA-N1-A6IA-01A","17:HELZ:67203319:-:19:OAZ1:2272735:+:fusion","HELZ--OAZ1","ENSG00000198265","ENSG00000104904",12.0,1.0,1.0,1.0,0.189,0.0267857142857]
["TCGA_SARC","TCGA-PC-A5DM-01A","3:FSTL1:120409532:-:3:CPOX:98585659:-:reg","FSTL1--CPOX","ENSG00000163430","ENSG00000080819",9.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SARC","TCGA-PC-A5DN-01A","12:MAPKAPK5:111888618:+:12:UNC119B:120719920:+:reg","MAPKAPK5--UNC119B","ENSG00000089022","ENSG00000175970",6.0,1.0,1.0,1.0,0.603,0.0078431372549]
["TCGA_SARC","TCGA-QC-A6FX-01A","19:ZNF429:21505774:+:19:ZNF569:37444964:-:strandcross","ZNF429--ZNF569","ENSG00000197013","ENSG00000196437",4.0,1.0,1.0,1.0,0.905,0.00252525252525]
["TCGA_SARC","TCGA-QC-AA9N-01A","3:FSTL1:120409532:-:15:RORA:60531851:-:fusion","FSTL1--RORA","ENSG00000163430","ENSG00000069667",6.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_SARC","TCGA-QQ-A5VA-01A","4:CENPE:103108803:-:18:LINC01924:64127385:+:fusion","CENPE--LINC01924","ENSG00000138778","ENSG00000267134",2.0,1.0,1.0,1.0,0.532,0.0104821802935]
["TCGA_SARC","TCGA-QQ-A5VC-01A","11:C2CD3:74139605:-:11:GRM5-AS1:88522891:+:strandcross","C2CD3--GRM5-AS1","ENSG00000168014","ENSG00000255082",15.0,1.0,1.0,1.0,0.734,0.0]
["TCGA_SARC","TCGA-QQ-A8VH-01A","12:NCOR2:124419957:-:12:SCARB1:124817707:-:rev","NCOR2--SCARB1","ENSG00000196498","ENSG00000073060",23.0,3.0,3.0,2.0,0.893166433120974,"NA"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","12:CPM:68932678:-:12:AC068305.3:59056006:+:strandcross","CPM--AC068305.3","ENSG00000135678","ENSG00000257443",3.0,1.0,1.0,1.0,0.207,0.0287958115183]
["TCGA_SARC","TCGA-SG-A6Z7-01A","1:DNM3:172131288:+:12:AC136188.1:73913957:+:fusion","DNM3--AC136188.1","ENSG00000197959","ENSG00000257587",16.0,1.0,1.0,1.0,0.654244539310917,0.0157068062827]
["TCGA_SARC","TCGA-SI-A71O-01A","11:NTM:132212147:+:2:CTNNA2:79858013:+:fusion","NTM--CTNNA2","ENSG00000182667","ENSG00000066032",10.0,1.0,1.0,1.0,0.556,0.00757575757576]
["TCGA_SARC","TCGA-SI-A71O-06A","18:FHOD3:36372744:+:18:GALNT1:35654560:+:rev","FHOD3--GALNT1","ENSG00000134775","ENSG00000141429",1.0,2.0,2.0,2.0,0.899,"NA"]
["TCGA_SARC","TCGA-SI-AA8B-01A","13:RUBCNL:46387677:-:10:CUBN:16851443:-:fusion","RUBCNL--CUBN","ENSG00000102445","ENSG00000107611",42.0,1.0,1.0,1.0,0.872951540193437,0.00429184549356]
["TCGA_SARC","TCGA-VT-A80G-01A","4:LRAT:154636396:+:3:NAALADL2:175096790:+:fusion","LRAT--NAALADL2","ENSG00000121207","ENSG00000177694",3.0,1.0,1.0,1.0,0.922,0.00909090909091]
["TCGA_SARC","TCGA-VT-A80J-02A","4:TENM3:182601161:+:2:LINC01886:107555133:+:fusion","TENM3--LINC01886","ENSG00000218336","ENSG00000224568",8.0,2.0,2.0,2.0,0.157,0.025]
["TCGA_SARC","TCGA-WK-A8XO-01A","1:LINC01719:146052948:+:12:LRRIQ1:85127832:+:fusion","LINC01719--LRRIQ1","ENSG00000233396","ENSG00000133640",14.0,1.0,1.0,1.0,0.564,0.00380228136882]
["TCGA_SARC","TCGA-WK-A8XX-01A","20:JPH2:44159618:-:9:RNF20:101535398:+:fusion","JPH2--RNF20","ENSG00000149596","ENSG00000155827",4.0,1.0,1.0,1.0,0.921,0.0]
["TCGA_SARC","TCGA-WP-A9GB-01A","15:MEIS2:36950324:-:16:BBS2:56511284:-:fusion","MEIS2--BBS2","ENSG00000134138","ENSG00000125124",9.0,1.0,1.0,1.0,0.386,0.0104166666667]
["TCGA_SARC","TCGA-X6-A7W8-01A","17:FAM222B:28812209:-:17:PRPSAP1:76313891:-:rev","FAM222B--PRPSAP1","ENSG00000173065","ENSG00000161542",10.0,1.0,1.0,1.0,0.887,0.00290697674419]
["TCGA_SARC","TCGA-X6-A7WC-01A","2:TTLL4:218711037:+:X:DHRSX:2291603:-:fusion","TTLL4--DHRSX","ENSG00000135912","ENSG00000169084",3.0,1.0,1.0,1.0,0.865,0.00729927007299]
["TCGA_SARC","TCGA-X6-A8C2-01A","6:PRRC2A:31620858:+:6:TREM2:41159882:-:strandcross","PRRC2A--TREM2","ENSG00000204469","ENSG00000095970",6.0,1.0,1.0,1.0,0.98,0.00442477876106]
["TCGA_SARC","TCGA-X6-A8C4-01A","17:DCAF7:63550815:+:17:LINC01483:69594787:+:reg","DCAF7--LINC01483","ENSG00000136485","ENSG00000227517",2.0,1.0,1.0,1.0,0.891,0.002457002457]
["TCGA_SARC","TCGA-X6-A8C6-01A","14:NUMB:73323130:-:3:AC128685.1:163207975:+:fusion","NUMB--AC128685.1","ENSG00000133961","ENSG00000241168",2.0,1.0,1.0,1.0,0.983,0.00319488817891]
["TCGA_SARC","TCGA-X6-A8C6-01A","9:ABL1:130863035:+:9:LINC01505:106638159:+:rev","ABL1--LINC01505","ENSG00000097007","ENSG00000234323",9.0,1.0,1.0,1.0,0.934,0.00638977635783]
["TCGA_SARC","TCGA-X6-A8C6-01A","9:ABL1:130863035:+:9:LINC01505:106664753:+:rev","ABL1--LINC01505","ENSG00000097007","ENSG00000234323",40.0,1.0,1.0,1.0,0.73604624448194,0.00958466453674]
["TCGA_SARC","TCGA-X9-A971-01A","2:ERCC3:127292610:-:2:WDR33:127771004:-:rev","ERCC3--WDR33","ENSG00000163161","ENSG00000136709",1.0,1.0,1.0,1.0,0.857,"NA"]
["TCGA_SKCM","TCGA-3N-A9WC-06A","9:AIF1L:131096863:+:20:NRSN2:353210:+:fusion","AIF1L--NRSN2","ENSG00000126878","ENSG00000125841",2.0,1.0,1.0,1.0,0.826,0.00744416873449]
["TCGA_SKCM","TCGA-BF-A3DJ-01A","2:XRCC5:216162048:+:2:AC122136.1:215870264:+:rev","XRCC5--AC122136.1","ENSG00000079246","ENSG00000227824",2.0,1.0,1.0,1.0,0.692,"NA"]
["TCGA_SKCM","TCGA-BF-A5EP-01A","20:UQCC1:35411940:-:20:CPNE1:35632923:-:rev","UQCC1--CPNE1","ENSG00000101019","ENSG00000214078",3.0,1.0,3.0,1.0,0.995,"NA"]
["TCGA_SKCM","TCGA-BF-AAP1-01A","9:GNE:36246031:-:10:BICC1:58620855:+:fusion","GNE--BICC1","ENSG00000159921","ENSG00000122870",2.0,1.0,1.0,1.0,0.79,0.00492610837438]
["TCGA_SKCM","TCGA-BF-AAP6-01A","9:RABGAP1:123020459:+:5:HCN1:45267253:-:fusion","RABGAP1--HCN1","ENSG00000011454","ENSG00000164588",4.0,1.0,1.0,1.0,0.997,0.0036496350365]
["TCGA_SKCM","TCGA-D3-A1Q3-06A","5:ERGIC1:172834433:+:5:G3BP1:151786572:+:rev","ERGIC1--G3BP1","ENSG00000113719","ENSG00000145907",2.0,1.0,1.0,1.0,0.656,0.00308641975309]
["TCGA_SKCM","TCGA-D3-A1Q8-06A","2:LYPD6:149437826:+:2:MBD5:148489386:+:rev","LYPD6--MBD5","ENSG00000187123","ENSG00000204406",2.0,1.0,1.0,1.0,0.983,"NA"]
["TCGA_SKCM","TCGA-D3-A2J6-06A","15:IREB2:78494264:+:6:C6orf52:10683232:-:fusion","IREB2--C6orf52","ENSG00000136381","ENSG00000137434",2.0,1.0,1.0,1.0,0.733,0.00697674418605]
["TCGA_SKCM","TCGA-D3-A2J9-06A","15:AC091544.7:92699040:-:15:GLDN:51397470:+:strandcross","AC091544.7--GLDN","ENSG00000185442","ENSG00000186417",13.0,1.0,1.0,1.0,0.781,0.00230946882217]
["TCGA_SKCM","TCGA-D3-A2JC-06A","22:POLR3H:41540699:-:5:CTNND2:11732272:-:fusion","POLR3H--CTNND2","ENSG00000100413","ENSG00000169862",40.0,1.0,1.0,1.0,0.741928116958548,0.00342857142857]
["TCGA_SKCM","TCGA-D3-A2JG-06A","19:R3HDM4:900829:-:17:NLRP1:5501872:-:fusion","R3HDM4--NLRP1","ENSG00000198858","ENSG00000091592",4.0,1.0,1.0,1.0,0.27,0.0172910662824]
["TCGA_SKCM","TCGA-D3-A2JN-06A","19:AP2A1:49792064:+:19:VRK3:49979242:-:strandcross","AP2A1--VRK3","ENSG00000196961","ENSG00000105053",2.0,1.0,1.0,1.0,0.379,0.00996677740864]
["TCGA_SKCM","TCGA-D3-A3C1-06A","12:CD63:55726700:-:12:C12orf10:53306680:+:strandcross","CD63--C12orf10","ENSG00000135404","ENSG00000139637",7.0,2.0,1.0,1.0,0.363,0.00970873786408]
["TCGA_SKCM","TCGA-D3-A3C1-06A","7:LHFPL3:104736911:+:7:AC092590.1:115647987:-:strandcross","LHFPL3--AC092590.1","ENSG00000187416","ENSG00000242072",33.0,1.0,1.0,1.0,0.682180920255437,0.00647249190939]
["TCGA_SKCM","TCGA-D3-A3CC-06A","19:GIPR:45678226:+:19:LGALS7B:38790689:+:rev","GIPR--LGALS7B","ENSG00000010310","ENSG00000178934",10.0,1.0,1.0,1.0,0.342,0.0218446601942]
["TCGA_SKCM","TCGA-D3-A3CF-06A","2:BABAM2:27894684:+:2:AC093390.2:1811074:+:rev","BABAM2--AC093390.2","ENSG00000243147","ENSG00000284600",13.0,1.0,1.0,1.0,0.305,0.0202702702703]
["TCGA_SKCM","TCGA-D3-A3MO-06A","8:GPAT4:41584917:+:8:LY6H:143159709:-:strandcross","GPAT4--LY6H","ENSG00000158669","ENSG00000176956",2.0,1.0,1.0,1.0,0.808,0.00852272727273]
["TCGA_SKCM","TCGA-D3-A51H-06A","9:JAK2:5029906:+:12:AC025575.1:71069630:-:fusion","JAK2--AC025575.1","ENSG00000096968","ENSG00000257454",8.0,1.0,1.0,1.0,0.53,0.00952380952381]
["TCGA_SKCM","TCGA-D3-A51T-06A","3:CCDC50:191329723:+:3:IL1RAP:190604128:+:rev","CCDC50--IL1RAP","ENSG00000152492","ENSG00000196083",1.0,1.0,1.0,1.0,0.937,"NA"]
["TCGA_SKCM","TCGA-D3-A8GB-06A","10:STAM:17704518:+:10:VIM:17236294:+:rev","STAM--VIM","ENSG00000136738","ENSG00000026025",2.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_SKCM","TCGA-D9-A149-06A","15:IQGAP1:90449643:+:15:NGRN:90275447:+:rev","IQGAP1--NGRN","ENSG00000140575","ENSG00000182768",3.0,1.0,1.0,1.0,0.668,"NA"]
["TCGA_SKCM","TCGA-D9-A3Z3-06A","11:RNF121:71960891:+:11:MRPL21:68900605:-:strandcross","RNF121--MRPL21","ENSG00000137522","ENSG00000197345",8.0,1.0,1.0,1.0,0.466,0.0177777777778]
["TCGA_SKCM","TCGA-D9-A4Z5-01A","13:IL17D:20704291:+:13:IFT88:20625750:+:rev","IL17D--IFT88","ENSG00000172458","ENSG00000032742",3.0,1.0,1.0,1.0,0.975,"NA"]
["TCGA_SKCM","TCGA-DA-A1HW-06A","15:SEC11A:84716025:-:15:VPS33B:91003131:-:rev","SEC11A--VPS33B","ENSG00000140612","ENSG00000184056",249.0,1.0,1.0,1.0,0.9825520195127,0.0]
["TCGA_SKCM","TCGA-DA-A1I2-06A","17:AP2B1:35710320:+:17:PPM1E:58955649:+:reg","AP2B1--PPM1E","ENSG00000006125","ENSG00000175175",2.0,1.0,1.0,1.0,0.167,0.0140845070423]
["TCGA_SKCM","TCGA-DA-A1IA-06A","1:NOTCH2NL:146228709:-:1:UCK2:165890204:+:strandcross","NOTCH2NL--UCK2","ENSG00000213240","ENSG00000143179",12.0,1.0,1.0,1.0,0.579,0.00436205016358]
["TCGA_SKCM","TCGA-DA-A3F3-06A","9:ZDHHC21:14639896:-:1:PHGDH:119734634:+:fusion","ZDHHC21--PHGDH","ENSG00000175893","ENSG00000092621",34.0,1.0,1.0,1.0,0.418995449436641,0.00827814569536]
["TCGA_SKCM","TCGA-DA-A95V-06A","11:NUMA1:72069842:-:11:C2CD3:74013525:-:rev","NUMA1--C2CD3","ENSG00000137497","ENSG00000168014",19.0,1.0,1.0,1.0,0.879279525595722,0.00481927710843]
["TCGA_SKCM","TCGA-EB-A24C-01A","3:ATXN7:63913225:+:3:LINC01811:34298853:+:rev","ATXN7--LINC01811","ENSG00000163635","ENSG00000226320",7.0,1.0,1.0,1.0,0.322,0.0147928994083]
["TCGA_SKCM","TCGA-EB-A3Y6-01A","22:RTCB:32406662:-:22:FAM83F:40029516:+:strandcross","RTCB--FAM83F","ENSG00000100220","ENSG00000133477",22.0,1.0,1.0,1.0,0.390322523910067,0.0173410404624]
["TCGA_SKCM","TCGA-EB-A42Z-01A","22:ZNRF3:28884066:+:22:XBP1:28799153:-:strandcross","ZNRF3--XBP1","ENSG00000183579","ENSG00000100219",3.0,2.0,1.0,1.0,0.264,0.00460829493088]
["TCGA_SKCM","TCGA-EB-A44Q-06A","12:R3HDM2:57430720:-:5:PRDM9:23493471:+:fusion","R3HDM2--PRDM9","ENSG00000179912","ENSG00000164256",44.0,1.0,1.0,1.0,0.768907185425037,0.00353356890459]
["TCGA_SKCM","TCGA-EB-A44R-06A","5:SEMA5A:9545584:-:5:BASP1:17089073:+:strandcross","SEMA5A--BASP1","ENSG00000112902","ENSG00000176788",6.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_SKCM","TCGA-EB-A4OY-01A","14:PSEN1:73136583:+:12:NT5DC3:103771329:-:fusion","PSEN1--NT5DC3","ENSG00000080815","ENSG00000111696",2.0,1.0,1.0,1.0,0.925,0.0]
["TCGA_SKCM","TCGA-EB-A550-01A","19:ACP5:11577593:-:19:GTF2F1:6389637:-:reg","ACP5--GTF2F1","ENSG00000102575","ENSG00000125651",21.0,1.0,1.0,1.0,0.937221119000231,0.00584795321637]
["TCGA_SKCM","TCGA-EB-A551-01A","1:PTPRF:43538277:+:1:CFAP74:1930336:-:strandcross","PTPRF--CFAP74","ENSG00000142949","ENSG00000142609",18.0,1.0,1.0,1.0,0.905533719504039,0.0]
["TCGA_SKCM","TCGA-EB-A5SE-01A","7:RSBN1L:77697055:+:7:HGF:81745120:-:strandcross","RSBN1L--HGF","ENSG00000187257","ENSG00000019991",13.0,1.0,1.0,1.0,0.899,0.0]
["TCGA_SKCM","TCGA-EB-A5UL-06A","12:PCBP2:53471807:+:10:R3HCC1L:98208101:+:fusion","PCBP2--R3HCC1L","ENSG00000197111","ENSG00000166024",6.0,1.0,1.0,1.0,0.95,0.0]
["TCGA_SKCM","TCGA-EB-A6L9-06A","2:SRBD1:45562653:-:2:C2orf91:41938613:-:reg","SRBD1--C2orf91","ENSG00000068784","ENSG00000205086",26.0,1.0,1.0,1.0,0.922359315273735,0.00252525252525]
["TCGA_SKCM","TCGA-EB-A82B-01A","11:RPS6KA4:64359449:+:11:KCNK4-TEX40:64303482:+:rev","RPS6KA4--KCNK4-TEX40","ENSG00000162302","ENSG00000257069",188.0,1.0,1.0,1.0,0.999871517610556,"NA"]
["TCGA_SKCM","TCGA-EB-A82C-01A","5:FER:108897848:+:5:FBXL17:107861860:-:strandcross","FER--FBXL17","ENSG00000151422","ENSG00000145743",4.0,1.0,1.0,1.0,0.694,0.0121457489879]
["TCGA_SKCM","TCGA-EE-A17Z-06A","3:GPD1L:32140366:+:3:ZCWPW2:28413056:+:rev","GPD1L--ZCWPW2","ENSG00000152642","ENSG00000206559",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_SKCM","TCGA-EE-A17Z-06A","3:OSBPL10:31980899:-:3:GPD1L:32158876:+:strandcross","OSBPL10--GPD1L","ENSG00000144645","ENSG00000152642",3.0,1.0,1.0,1.0,0.855,0.0]
["TCGA_SKCM","TCGA-EE-A184-06A","22:EIF3L:37878171:+:22:ADA2:17191810:-:strandcross","EIF3L--ADA2","ENSG00000100129","ENSG00000093072",232.0,1.0,1.0,1.0,0.828595183967085,0.00537634408602]
["TCGA_SKCM","TCGA-EE-A20F-06A","16:MGRN1:4625048:+:16:C16orf96:4571561:+:rev","MGRN1--C16orf96","ENSG00000102858","ENSG00000205832",14.0,2.0,2.0,2.0,0.766,"NA"]
["TCGA_SKCM","TCGA-EE-A20I-06A","5:PCDHGB3:141372809:+:10:JMJD1C:63264764:-:fusion","PCDHGB3--JMJD1C","ENSG00000262209","ENSG00000171988",7.0,1.0,1.0,1.0,0.197,0.0249433106576]
["TCGA_SKCM","TCGA-EE-A29L-06A","7:SSBP1:141745584:+:7:AC073111.4:150410160:+:reg","SSBP1--AC073111.4","ENSG00000106028","ENSG00000284048",4.0,1.0,1.0,1.0,0.178,0.0320512820513]
["TCGA_SKCM","TCGA-EE-A29L-06A","3:OGG1:9750423:+:3:MTMR14:9701790:+:rev","OGG1--MTMR14","ENSG00000114026","ENSG00000163719",2.0,3.0,4.0,3.0,0.608,"NA"]
["TCGA_SKCM","TCGA-EE-A29X-06A","11:ARCN1:118584644:+:11:ATP5L:118409000:+:rev","ARCN1--ATP5L","ENSG00000095139","ENSG00000167283",2.0,1.0,2.0,1.0,0.772,"NA"]
["TCGA_SKCM","TCGA-EE-A2GB-06A","18:GAREM1:32392895:-:18:PTPRM:7888106:+:strandcross","GAREM1--PTPRM","ENSG00000141441","ENSG00000173482",20.0,1.0,1.0,1.0,0.870973462518724,0.00361663652803]
["TCGA_SKCM","TCGA-EE-A2GO-06A","15:UBR1:43105942:-:15:EPB42:43106295:-:rev","UBR1--EPB42","ENSG00000159459","ENSG00000166947",3.0,1.0,1.0,1.0,0.614,"NA"]
["TCGA_SKCM","TCGA-EE-A2M6-06A","3:NMNAT3:139627616:-:3:PLA1A:119618019:+:strandcross","NMNAT3--PLA1A","ENSG00000163864","ENSG00000144837",3.0,1.0,1.0,1.0,0.512,0.0133037694013]
["TCGA_SKCM","TCGA-EE-A2MC-06A","9:CDKN2B-AS1:21995161:+:9:AC006450.3:124008091:-:strandcross","CDKN2B-AS1--AC006450.3","ENSG00000240498","ENSG00000236668",3.0,1.0,1.0,1.0,0.672,0.0126582278481]
["TCGA_SKCM","TCGA-EE-A2MH-06A","8:PCMTD1:51845661:-:8:SLCO5A1:69761875:-:rev","PCMTD1--SLCO5A1","ENSG00000168300","ENSG00000137571",1.0,1.0,1.0,1.0,0.859,0.00437636761488]
["TCGA_SKCM","TCGA-EE-A2MN-06A","16:WDR59:74984964:-:16:KIFC3:57761171:-:reg","WDR59--KIFC3","ENSG00000103091","ENSG00000140859",14.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_SKCM","TCGA-EE-A2MS-06A","12:ZDHHC17:76764329:+:12:GLIPR1L1:75363102:+:rev","ZDHHC17--GLIPR1L1","ENSG00000186908","ENSG00000173401",55.0,1.0,1.0,1.0,0.937060263458621,0.00326797385621]
["TCGA_SKCM","TCGA-EE-A3J7-06A","11:ACER3:76861079:+:11:AP002498.1:76978619:-:strandcross","ACER3--AP002498.1","ENSG00000078124","ENSG00000254988",7.0,1.0,1.0,1.0,0.3,0.00909090909091]
["TCGA_SKCM","TCGA-ER-A193-06A","12:TMEM117:44376724:+:12:UBC:124913774:-:strandcross","TMEM117--UBC","ENSG00000139173","ENSG00000150991",5.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_SKCM","TCGA-ER-A197-06A","11:DGAT2:75769112:+:11:TMEM126A:85654063:+:reg","DGAT2--TMEM126A","ENSG00000062282","ENSG00000171202",2.0,1.0,1.0,1.0,0.923,0.00266666666667]
["TCGA_SKCM","TCGA-ER-A197-06A","1:PLD5:242524088:-:2:PLA2R1:159949776:-:fusion","PLD5--PLA2R1","ENSG00000180287","ENSG00000153246",5.0,1.0,1.0,1.0,0.888,0.00266666666667]
["TCGA_SKCM","TCGA-ER-A197-06A","4:IGFBP7:57040824:-:17:SPATA22:3446601:-:fusion","IGFBP7--SPATA22","ENSG00000163453","ENSG00000141255",13.0,1.0,1.0,1.0,0.984,0.00266666666667]
["TCGA_SKCM","TCGA-ER-A19C-06A","22:TAB1:39417849:+:22:PHF21B:44885938:-:strandcross","TAB1--PHF21B","ENSG00000100324","ENSG00000056487",12.0,1.0,1.0,1.0,0.289,0.0216718266254]
["TCGA_SKCM","TCGA-ER-A19G-06A","1:MINOS1:19597109:+:1:PQLC2:19324633:+:rev","MINOS1--PQLC2","ENSG00000173436","ENSG00000040487",19.0,1.0,1.0,1.0,0.878655012009891,"NA"]
["TCGA_SKCM","TCGA-ER-A19M-06A","19:SLC27A1:17470707:+:19:RASGRP4:38420262:-:strandcross","SLC27A1--RASGRP4","ENSG00000130304","ENSG00000171777",8.0,1.0,1.0,1.0,0.959,0.0]
["TCGA_SKCM","TCGA-ER-A19T-01A","11:GAB2:78280601:-:15:FGF7:49483151:+:fusion","GAB2--FGF7","ENSG00000033327","ENSG00000140285",2.0,1.0,1.0,1.0,0.558,0.00986842105263]
["TCGA_SKCM","TCGA-ER-A19T-01A","9:UBAC1:135961025:-:11:SHANK2:71224796:-:fusion","UBAC1--SHANK2","ENSG00000130560","ENSG00000162105",12.0,2.0,2.0,2.0,0.617,0.00986842105263]
["TCGA_SKCM","TCGA-ER-A19T-06A","8:PVT1:127794734:+:11:TPCN2:69062884:+:fusion","PVT1--TPCN2","ENSG00000249859","ENSG00000162341",5.0,2.0,2.0,2.0,0.995,0.0]
["TCGA_SKCM","TCGA-ER-A19W-06A","9:ABCA1:104858522:-:9:AL158070.1:105557175:-:rev","ABCA1--AL158070.1","ENSG00000165029","ENSG00000228317",11.0,1.0,1.0,1.0,0.599,"NA"]
["TCGA_SKCM","TCGA-ER-A2NE-06A","17:HOXB6:48604480:-:4:EPHA5:65643427:-:fusion","HOXB6--EPHA5","ENSG00000120093","ENSG00000145242",2.0,1.0,1.0,1.0,0.67,0.00568181818182]
["TCGA_SKCM","TCGA-ER-A3ET-06A","11:OTUB1:63986514:+:11:DLG2:84534731:-:strandcross","OTUB1--DLG2","ENSG00000256100","ENSG00000150672",6.0,1.0,1.0,1.0,0.523,0.00335570469799]
["TCGA_SKCM","TCGA-ER-A3EV-06A","16:CTCF:67562724:+:16:LRRC36:67375258:+:rev","CTCF--LRRC36","ENSG00000102974","ENSG00000159708",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_SKCM","TCGA-FR-A3YO-06A","16:ANKRD11:89418284:-:11:BRMS1:66342241:-:fusion","ANKRD11--BRMS1","ENSG00000167522","ENSG00000174744",76.0,1.0,1.0,1.0,0.959165422932579,0.00313479623824]
["TCGA_SKCM","TCGA-FR-A8YE-06A","5:SUB1:32599069:+:5:GHR:42565864:+:reg","SUB1--GHR","ENSG00000113387","ENSG00000112964",5.0,1.0,1.0,1.0,0.375,0.0154639175258]
["TCGA_SKCM","TCGA-FS-A1Z4-06A","15:FMN1:33064957:-:17:KANSL1:46172232:-:fusion","FMN1--KANSL1","ENSG00000248905","ENSG00000120071",23.0,1.0,1.0,1.0,0.868506989231376,0.00514138817481]
["TCGA_SKCM","TCGA-FS-A1ZA-06A","2:FMNL2:152335720:+:2:PRPF40A:152681336:-:strandcross","FMNL2--PRPF40A","ENSG00000157827","ENSG00000196504",3.0,3.0,1.0,1.0,0.866,0.00199203187251]
["TCGA_SKCM","TCGA-FS-A1ZE-06A","20:KIAA1755:38223538:-:20:CNBD2:35972629:+:strandcross","KIAA1755--CNBD2","ENSG00000149633","ENSG00000149646",3.0,1.0,1.0,1.0,0.743,0.00990099009901]
["TCGA_SKCM","TCGA-FS-A1ZJ-06A","17:ATAD5:30855327:+:11:PSMA1:14519041:-:fusion","ATAD5--PSMA1","ENSG00000176208","ENSG00000256206",5.0,1.0,1.0,1.0,0.944,0.00641025641026]
["TCGA_SKCM","TCGA-FS-A1ZK-06A","17:FAM222B:28812209:-:17:CRLF3:30804108:-:rev","FAM222B--CRLF3","ENSG00000173065","ENSG00000176390",12.0,1.0,1.0,1.0,0.612,0.00941176470588]
["TCGA_SKCM","TCGA-FS-A1ZK-06A","22:SYN3:32596674:-:6:C6orf48:31835411:+:fusion","SYN3--C6orf48","ENSG00000185666","ENSG00000204387",8.0,1.0,1.0,1.0,0.394,0.0117647058824]
["TCGA_SKCM","TCGA-FS-A1ZQ-06A","1:PLEKHA6:204367799:-:1:NUCKS1:205729621:-:rev","PLEKHA6--NUCKS1","ENSG00000143850","ENSG00000069275",3.0,1.0,1.0,1.0,0.876,0.00462962962963]
["TCGA_SKCM","TCGA-FS-A1ZQ-06A","11:AMBRA1:46593828:-:11:LRP4:46902929:-:rev","AMBRA1--LRP4","ENSG00000110497","ENSG00000134569",1.0,1.0,1.0,1.0,0.98,"NA"]
["TCGA_SKCM","TCGA-FS-A4F4-06A","11:NAV2:19892594:+:12:ERC1:1480843:+:fusion","NAV2--ERC1","ENSG00000166833","ENSG00000082805",6.0,1.0,1.0,1.0,0.945,0.002849002849]
["TCGA_SKCM","TCGA-FS-A4F4-06A","22:POLDIP3:42602770:-:22:MED15:20551436:+:strandcross","POLDIP3--MED15","ENSG00000100227","ENSG00000099917",18.0,1.0,1.0,1.0,0.678346421328341,0.00854700854701]
["TCGA_SKCM","TCGA-FS-A4F4-06A","5:TRIO:14394130:+:5:SLC9A3:492071:-:strandcross","TRIO--SLC9A3","ENSG00000038382","ENSG00000066230",14.0,1.0,1.0,1.0,0.829,0.00569800569801]
["TCGA_SKCM","TCGA-FW-A3I3-06A","5:SSBP2:81442653:-:5:LINC02107:38183704:+:strandcross","SSBP2--LINC02107","ENSG00000145687","ENSG00000250003",16.0,1.0,1.0,1.0,0.823888308155648,0.00454545454545]
["TCGA_SKCM","TCGA-GF-A2C7-01A","1:ECE1:21345376:-:6:TRAF3IP2:111580389:-:fusion","ECE1--TRAF3IP2","ENSG00000117298","ENSG00000056972",18.0,1.0,1.0,1.0,0.641381036190713,0.0076726342711]
["TCGA_SKCM","TCGA-GF-A769-01A","3:ZMAT3:179067483:-:3:TP63:189737740:+:strandcross","ZMAT3--TP63","ENSG00000172667","ENSG00000073282",11.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_SKCM","TCGA-GF-A769-01A","8:MTSS1:124699526:-:8:NSD3:38348215:-:reg","MTSS1--NSD3","ENSG00000170873","ENSG00000147548",38.0,1.0,1.0,1.0,0.804224444113061,0.00560224089636]
["TCGA_SKCM","TCGA-GN-A266-06A","16:SRRM2:2760499:+:16:BCAR4:11828391:-:strandcross","SRRM2--BCAR4","ENSG00000167978","ENSG00000262117",3.0,1.0,1.0,1.0,0.877,0.00359066427289]
["TCGA_SKCM","TCGA-GN-A26D-06A","11:ENDOD1:95090227:+:11:RAB30:82994122:-:strandcross","ENDOD1--RAB30","ENSG00000149218","ENSG00000137502",23.0,1.0,1.0,1.0,0.855342138033587,0.0]
["TCGA_SKCM","TCGA-GN-A26D-06A","12:CPSF6:69239706:+:12:AC090503.2:73143854:-:strandcross","CPSF6--AC090503.2","ENSG00000111605","ENSG00000258294",62.0,1.0,1.0,1.0,0.920287203544478,0.0]
["TCGA_SKCM","TCGA-GN-A26D-06A","5:AP3B1:78240862:-:5:LHFPL2:78564871:-:rev","AP3B1--LHFPL2","ENSG00000132842","ENSG00000145685",8.0,1.0,1.0,1.0,0.677,"NA"]
["TCGA_SKCM","TCGA-GN-A8LL-06A","11:LDLRAD3:36098461:+:3:VWA5B2:184234266:+:fusion","LDLRAD3--VWA5B2","ENSG00000179241","ENSG00000145198",4.0,1.0,1.0,1.0,0.325,0.0]
["TCGA_SKCM","TCGA-LH-A9QB-06A","20:UQCC1:35374184:-:20:RBM39:35739017:-:rev","UQCC1--RBM39","ENSG00000101019","ENSG00000131051",2.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_SKCM","TCGA-RP-A695-06A","15:RPAP1:41544219:-:1:SYTL1:27347421:+:fusion","RPAP1--SYTL1","ENSG00000103932","ENSG00000142765",15.0,1.0,1.0,1.0,0.996,0.00473933649289]
["TCGA_SKCM","TCGA-W3-AA1V-06B","10:SLC25A16:68488467:-:10:DRGX:49366381:-:reg","SLC25A16--DRGX","ENSG00000122912","ENSG00000165606",16.0,1.0,1.0,1.0,0.810960740507516,0.0]
["TCGA_SKCM","TCGA-WE-A8K4-01A","6:TRAM2:52535783:-:6:GFOD1:13365662:-:reg","TRAM2--GFOD1","ENSG00000065308","ENSG00000145990",2.0,1.0,1.0,1.0,0.637,0.00303951367781]
["TCGA_SKCM","TCGA-WE-A8ZQ-06A","16:ZFP90:68539825:+:16:CBFB:67082213:+:rev","ZFP90--CBFB","ENSG00000184939","ENSG00000067955",6.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_SKCM","TCGA-WE-A8ZT-06A","19:LDLR:11120522:+:19:DNM2:10812264:+:rev","LDLR--DNM2","ENSG00000130164","ENSG00000079805",3.0,1.0,1.0,1.0,0.929,"NA"]
["TCGA_SKCM","TCGA-XV-A9W5-01A","11:C2CD3:74161399:-:11:PC:66872159:-:reg","C2CD3--PC","ENSG00000168014","ENSG00000173599",3.0,1.0,1.0,1.0,0.942,0.00378787878788]
["TCGA_SKCM","TCGA-YD-A89C-06A","6:SLC22A23:3410188:-:15:LRRC49:70904552:+:fusion","SLC22A23--LRRC49","ENSG00000137266","ENSG00000137821",53.0,1.0,1.0,1.0,0.786238709743436,0.0]
["TCGA_SKCM","TCGA-YG-AA3P-06A","11:CTTN:70422995:+:11:PPP6R3:68583043:+:rev","CTTN--PPP6R3","ENSG00000085733","ENSG00000110075",6.0,1.0,1.0,1.0,0.786,0.00884955752212]
["TCGA_SKCM","TCGA-Z2-AA3S-06A","2:ALK:29717578:-:2:STK39:168182090:-:rev","ALK--STK39","ENSG00000171094","ENSG00000198648",2.0,1.0,1.0,1.0,0.89,0.0]
["TCGA_STAD","TCGA-3M-AB46-01A","3:GPR160:170079897:+:3:PDCD10:167720273:-:strandcross","GPR160--PDCD10","ENSG00000173890","ENSG00000114209",3.0,1.0,1.0,1.0,0.841,0.0]
["TCGA_STAD","TCGA-B7-A5TN-01A","12:GPRC5A:12892042:+:8:NRG1:32595828:+:fusion","GPRC5A--NRG1","ENSG00000013588","ENSG00000157168",3.0,1.0,1.0,1.0,0.723,0.001001001001]
["TCGA_STAD","TCGA-BR-4253-01A","1:SNHG3:28506084:+:14:WARS:100343387:-:fusion","SNHG3--WARS","ENSG00000180198","ENSG00000140105",6.0,2.0,1.0,1.0,0.361,0.0]
["TCGA_STAD","TCGA-BR-4267-01A","3:OSBPL10:31876433:-:15:AC087633.2:95068880:+:fusion","OSBPL10--AC087633.2","ENSG00000144645","ENSG00000277654",5.0,1.0,1.0,1.0,0.798,0.0]
["TCGA_STAD","TCGA-BR-4357-01A","17:UBALD2:76265969:+:15:ZNF710:90074116:+:fusion","UBALD2--ZNF710","ENSG00000185262","ENSG00000140548",57.0,1.0,1.0,1.0,0.826269803679509,0.0]
["TCGA_STAD","TCGA-BR-4366-01A","11:UVRAG:76065788:+:6:PACRG:163312779:+:fusion","UVRAG--PACRG","ENSG00000198382","ENSG00000112530",6.0,1.0,1.0,1.0,0.952,0.00169491525424]
["TCGA_STAD","TCGA-BR-4368-01A","4:IRF2:184474379:-:10:NOLC1:102160233:+:fusion","IRF2--NOLC1","ENSG00000168310","ENSG00000166197",3.0,1.0,1.0,1.0,0.635,0.00456621004566]
["TCGA_STAD","TCGA-BR-6458-01A","20:ZFAS1:49279208:+:17:BAHCC1:81399534:+:fusion","ZFAS1--BAHCC1","ENSG00000177410","ENSG00000266074",2.0,1.0,1.0,1.0,0.595,0.0]
["TCGA_STAD","TCGA-BR-7197-01A","19:TCF3:1619780:-:1:DNAJC11:6654039:-:fusion","TCF3--DNAJC11","ENSG00000071564","ENSG00000007923",196.0,2.0,1.0,1.0,0.942534140084985,0.0]
["TCGA_STAD","TCGA-BR-7716-01A","1:TOMM20:235128595:-:1:EPHB2:22882359:+:strandcross","TOMM20--EPHB2","ENSG00000173726","ENSG00000133216",147.0,1.0,1.0,1.0,0.971279566066387,0.0]
["TCGA_STAD","TCGA-BR-7716-01A","15:GCNT3:59616881:+:15:FAM81A:59458550:+:rev","GCNT3--FAM81A","ENSG00000140297","ENSG00000157470",4.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_STAD","TCGA-BR-7717-01A","6:RCAN2:46456752:-:6:CYP39A1:46553854:-:rev","RCAN2--CYP39A1","ENSG00000172348","ENSG00000146233",2.0,2.0,1.0,1.0,0.995,"NA"]
["TCGA_STAD","TCGA-BR-7723-01A","5:ETF1:138542833:-:5:SIL1:139127853:-:rev","ETF1--SIL1","ENSG00000120705","ENSG00000120725",2.0,1.0,1.0,1.0,0.499,"NA"]
["TCGA_STAD","TCGA-BR-7901-01A","6:BEND3:107098551:-:6:WDR27:169457634:-:rev","BEND3--WDR27","ENSG00000178409","ENSG00000184465",5.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_STAD","TCGA-BR-7901-01A","1:ASH1L:155521100:-:1:GON4L:155805141:-:rev","ASH1L--GON4L","ENSG00000116539","ENSG00000116580",8.0,1.0,1.0,1.0,0.99,"NA"]
["TCGA_STAD","TCGA-BR-7959-01A","5:TPPP:677750:-:5:RETREG1:16572102:-:rev","TPPP--RETREG1","ENSG00000171368","ENSG00000154153",42.0,1.0,1.0,1.0,0.799459390226056,0.0]
["TCGA_STAD","TCGA-BR-8058-01A","9:TMEM38B:105722621:+:9:SLC44A1:105438281:+:rev","TMEM38B--SLC44A1","ENSG00000095209","ENSG00000070214",2.0,1.0,1.0,1.0,0.887,"NA"]
["TCGA_STAD","TCGA-BR-8060-01A","4:FAM193A:2663288:+:4:ZFYVE28:2341615:-:strandcross","FAM193A--ZFYVE28","ENSG00000125386","ENSG00000159733",12.0,1.0,1.0,1.0,0.376,9.25925925926E-4]
["TCGA_STAD","TCGA-BR-8060-01A","17:LINC00482:81309185:-:17:NPLOC4:81565607:-:rev","LINC00482--NPLOC4","ENSG00000185168","ENSG00000182446",3.0,1.0,1.0,1.0,0.551,"NA"]
["TCGA_STAD","TCGA-BR-8077-01A","12:ATXN2:111598784:-:7:AGR2:16801803:-:fusion","ATXN2--AGR2","ENSG00000204842","ENSG00000106541",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_STAD","TCGA-BR-8078-01A","22:GTSE1:46297479:+:3:SMARCC1:47678311:-:fusion","GTSE1--SMARCC1","ENSG00000075218","ENSG00000173473",2.0,1.0,1.0,1.0,0.971,0.0]
["TCGA_STAD","TCGA-BR-8286-01A","19:ZNF787:56121172:-:19:PPP1R12C:55096335:-:reg","ZNF787--PPP1R12C","ENSG00000142409","ENSG00000125503",2.0,2.0,1.0,1.0,0.373,0.00164473684211]
["TCGA_STAD","TCGA-BR-8289-01A","8:KIAA1456:12951381:+:3:LEKR1:157045340:+:fusion","KIAA1456--LEKR1","ENSG00000250305","ENSG00000197980",3.0,1.0,1.0,1.0,0.965,9.45179584121E-4]
["TCGA_STAD","TCGA-BR-8289-01A","12:YEATS4:69370975:+:12:LYZ:69352220:+:rev","YEATS4--LYZ","ENSG00000127337","ENSG00000090382",1.0,1.0,1.0,1.0,0.817,"NA"]
["TCGA_STAD","TCGA-BR-8289-01A","1:SRSF4:29181646:-:1:MECR:29206905:-:rev","SRSF4--MECR","ENSG00000116350","ENSG00000116353",45.0,1.0,1.0,1.0,0.864382493659832,"NA"]
["TCGA_STAD","TCGA-BR-8295-01A","5:CTNNA1:138753510:+:22:SCUBE1:43221289:-:fusion","CTNNA1--SCUBE1","ENSG00000044115","ENSG00000159307",4.0,1.0,1.0,1.0,0.312,0.00480769230769]
["TCGA_STAD","TCGA-BR-8297-01A","1:CASZ1:10796564:-:1:MTOR:11130777:-:rev","CASZ1--MTOR","ENSG00000130940","ENSG00000198793",4.0,1.0,1.0,1.0,0.844,"NA"]
["TCGA_STAD","TCGA-BR-8362-01A","19:LINC01841:14369943:-:16:CDH1:68801670:+:fusion","LINC01841--CDH1","ENSG00000266913","ENSG00000039068",25.0,1.0,1.0,1.0,0.839365670964976,0.00343053173242]
["TCGA_STAD","TCGA-BR-8362-01A","1:DTL:212047417:+:1:INTS7:212021212:-:strandcross","DTL--INTS7","ENSG00000143476","ENSG00000143493",12.0,4.0,2.0,2.0,1.0,0.0]
["TCGA_STAD","TCGA-BR-8366-01A","6:CARMIL1:25284909:+:6:IMPG1:75947533:-:strandcross","CARMIL1--IMPG1","ENSG00000079691","ENSG00000112706",2.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_STAD","TCGA-BR-8373-01A","10:GDI2:5773842:-:10:IL2RA:6012896:-:rev","GDI2--IL2RA","ENSG00000057608","ENSG00000134460",10.0,1.0,1.0,1.0,0.726,"NA"]
["TCGA_STAD","TCGA-BR-8373-01A","21:ITSN1:33642713:+:21:LINC00945:33062792:+:rev","ITSN1--LINC00945","ENSG00000205726","ENSG00000232539",22.0,1.0,1.0,1.0,0.547173044046661,"NA"]
["TCGA_STAD","TCGA-BR-8382-01A","17:TBX2:61403207:+:9:SURF6:133332760:-:fusion","TBX2--SURF6","ENSG00000121068","ENSG00000148296",3.0,1.0,1.0,1.0,0.819,0.0]
["TCGA_STAD","TCGA-BR-8484-01A","7:TRRAP:98985044:+:7:ANKIB1:92294889:+:rev","TRRAP--ANKIB1","ENSG00000196367","ENSG00000001629",35.0,1.0,1.0,1.0,0.886555930626058,0.00126342387871]
["TCGA_STAD","TCGA-BR-8485-01A","11:PNPLA2:822606:+:11:EPS8L2:720062:+:rev","PNPLA2--EPS8L2","ENSG00000177666","ENSG00000177106",16.0,1.0,1.0,1.0,0.827989937727512,"NA"]
["TCGA_STAD","TCGA-BR-8487-01A","3:VGLL4:11601833:-:3:ATG7:11554811:+:strandcross","VGLL4--ATG7","ENSG00000144560","ENSG00000197548",3.0,8.0,5.0,3.0,0.433,0.00357142857143]
["TCGA_STAD","TCGA-BR-8590-01A","12:PCBP2:53456001:+:17:STAT3:42331531:-:fusion","PCBP2--STAT3","ENSG00000257379","ENSG00000168610",11.0,1.0,1.0,1.0,0.151,0.0188679245283]
["TCGA_STAD","TCGA-BR-8590-01A","1:DSTYK:205211271:-:1:NUCKS1:205729621:-:rev","DSTYK--NUCKS1","ENSG00000133059","ENSG00000069275",5.0,1.0,2.0,1.0,0.762,"NA"]
["TCGA_STAD","TCGA-BR-8677-01A","18:ROCK1:21110818:-:18:ANKRD29:23649193:-:rev","ROCK1--ANKRD29","ENSG00000067900","ENSG00000154065",2.0,1.0,1.0,1.0,0.853,0.0]
["TCGA_STAD","TCGA-BR-8678-01A","16:NKD1:50621708:+:16:AC007493.1:50421217:+:rev","NKD1--AC007493.1","ENSG00000140807","ENSG00000260573",3.0,1.0,1.0,1.0,0.508,"NA"]
["TCGA_STAD","TCGA-BR-8679-01A","12:CFAP54:96522189:+:12:C12orf77:25006403:-:strandcross","CFAP54--C12orf77","ENSG00000188596","ENSG00000226397",3.0,1.0,1.0,1.0,0.619,0.00111607142857]
["TCGA_STAD","TCGA-BR-8682-01A","9:DNM1:128219252:+:14:EMC9:24139789:-:fusion","DNM1--EMC9","ENSG00000106976","ENSG00000100908",2.0,1.0,1.0,1.0,0.397,0.0115340253749]
["TCGA_STAD","TCGA-BR-8687-01A","4:SLC39A8:102385350:-:4:ELOVL6:110059754:-:rev","SLC39A8--ELOVL6","ENSG00000138821","ENSG00000170522",3.0,1.0,1.0,1.0,0.836,8.10372771475E-4]
["TCGA_STAD","TCGA-BR-A452-01A","12:CPSF6:69262562:+:1:ZRANB2:71065137:-:fusion","CPSF6--ZRANB2","ENSG00000111605","ENSG00000132485",2.0,1.0,1.0,1.0,0.778,0.001287001287]
["TCGA_STAD","TCGA-BR-A452-01A","11:ARHGEF12:120337275:+:11:POU2F3:120298265:+:rev","ARHGEF12--POU2F3","ENSG00000196914","ENSG00000137709",6.0,2.0,2.0,2.0,0.996,"NA"]
["TCGA_STAD","TCGA-BR-A452-01A","1:THRAP3:36224505:+:1:MAP7D1:36177873:+:rev","THRAP3--MAP7D1","ENSG00000054118","ENSG00000116871",63.0,1.0,1.0,1.0,0.893907870789676,"NA"]
["TCGA_STAD","TCGA-BR-A4CR-01A","8:FAM49B:129862229:-:8:PSKH2:86064631:-:reg","FAM49B--PSKH2","ENSG00000153310","ENSG00000147613",8.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_STAD","TCGA-BR-A4CS-01A","21:ITSN1:33642713:+:21:TMPRSS3:42395468:-:strandcross","ITSN1--TMPRSS3","ENSG00000205726","ENSG00000160183",11.0,1.0,1.0,1.0,0.792,0.0]
["TCGA_STAD","TCGA-BR-A4IZ-01A","6:EEF1A1:73521000:-:19:C3:6702579:-:fusion","EEF1A1--C3","ENSG00000156508","ENSG00000125730",2.0,1.0,1.0,1.0,0.72,9.22509225092E-4]
["TCGA_STAD","TCGA-BR-A4J2-01A","1:AL670729.1:228407478:+:2:TTC7A:46956839:+:fusion","AL670729.1--TTC7A","ENSG00000231563","ENSG00000068724",2.0,1.0,1.0,1.0,0.883,0.0]
["TCGA_STAD","TCGA-BR-A4J6-01A","12:RAP1B:68611052:+:12:LINC02384:68333664:-:strandcross","RAP1B--LINC02384","ENSG00000127314","ENSG00000251301",8.0,1.0,1.0,1.0,0.443,0.00102040816327]
["TCGA_STAD","TCGA-BR-A4PD-01A","19:LDLR:11089615:+:6:GFOD1:13365662:-:fusion","LDLR--GFOD1","ENSG00000130164","ENSG00000145990",2.0,1.0,1.0,1.0,0.443,0.0]
["TCGA_STAD","TCGA-BR-A4PE-01A","3:MSL2:136194972:-:15:AC104574.2:61590003:-:fusion","MSL2--AC104574.2","ENSG00000174579","ENSG00000259616",8.0,1.0,1.0,1.0,0.328,0.00646950092421]
["TCGA_STAD","TCGA-BR-A4PF-01A","12:PLEKHA5:19132450:+:12:RERGL:18143293:-:strandcross","PLEKHA5--RERGL","ENSG00000052126","ENSG00000111404",13.0,1.0,1.0,1.0,0.313,0.00249791840133]
["TCGA_STAD","TCGA-BR-A4QI-01A","15:AC025580.2:45450290:+:19:CEACAM19:44676271:+:fusion","AC025580.2--CEACAM19","ENSG00000259354","ENSG00000186567",4.0,1.0,1.0,1.0,0.77,0.0]
["TCGA_STAD","TCGA-BR-A4QI-01A","8:LYN:55880103:+:9:SHB:37974837:-:fusion","LYN--SHB","ENSG00000254087","ENSG00000255872",11.0,1.0,1.0,1.0,0.877,0.0]
["TCGA_STAD","TCGA-CD-5799-01A","17:CPD:30385236:+:17:WNT3:46773909:-:strandcross","CPD--WNT3","ENSG00000108582","ENSG00000108379",42.0,1.0,1.0,1.0,0.875306752983133,0.0]
["TCGA_STAD","TCGA-CD-5804-01A","12:SENP1:48096343:-:12:DDX23:48845782:-:rev","SENP1--DDX23","ENSG00000079387","ENSG00000174243",2.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_STAD","TCGA-CD-8524-01A","2:AC068547.1:151812357:-:2:IL1B:112836244:-:reg","AC068547.1--IL1B","ENSG00000162980","ENSG00000125538",15.0,1.0,1.0,1.0,0.353,0.0]
["TCGA_STAD","TCGA-CD-8525-01A","14:CCDC88C:91408659:-:14:PPP4R3A:91462877:-:rev","CCDC88C--PPP4R3A","ENSG00000015133","ENSG00000100796",3.0,1.0,1.0,1.0,0.928,"NA"]
["TCGA_STAD","TCGA-CD-8527-01A","X:RPS6KA3:20267039:-:X:BMX:15508345:+:strandcross","RPS6KA3--BMX","ENSG00000177189","ENSG00000102010",3.0,1.0,1.0,1.0,0.933,0.00179856115108]
["TCGA_STAD","TCGA-CD-8528-01A","15:SLTM:58932356:-:15:EPB42:43131142:-:reg","SLTM--EPB42","ENSG00000137776","ENSG00000166947",21.0,1.0,1.0,1.0,0.8227936322474,0.0]
["TCGA_STAD","TCGA-CD-8528-01A","8:PVT1:127796008:+:6:QRSL1:106665782:+:fusion","PVT1--QRSL1","ENSG00000249859","ENSG00000130348",27.0,1.0,1.0,1.0,0.82559213951114,0.0]
["TCGA_STAD","TCGA-CD-8529-01A","11:DEAF1:686858:-:11:CHID1:893519:-:rev","DEAF1--CHID1","ENSG00000177030","ENSG00000177830",3.0,1.0,1.0,1.0,0.551,"NA"]
["TCGA_STAD","TCGA-CD-8531-01A","3:TKT:53255836:-:3:DOCK3:50933981:+:strandcross","TKT--DOCK3","ENSG00000163931","ENSG00000088538",3.0,1.0,1.0,1.0,0.806,0.0]
["TCGA_STAD","TCGA-CD-8535-01A","3:USF3:113696370:-:3:ITGB5:124821474:-:rev","USF3--ITGB5","ENSG00000176542","ENSG00000082781",1.0,1.0,1.0,1.0,0.98,0.0]
["TCGA_STAD","TCGA-CD-8535-01A","2:RPL37A:216500031:+:2:SMARCAL1:216467944:+:rev","RPL37A--SMARCAL1","ENSG00000197756","ENSG00000138375",23.0,1.0,1.0,1.0,0.839540299902927,"NA"]
["TCGA_STAD","TCGA-CD-A487-01A","11:RNF169:74817714:+:11:POLD3:74668777:+:rev","RNF169--POLD3","ENSG00000166439","ENSG00000077514",11.0,1.0,2.0,1.0,0.794,"NA"]
["TCGA_STAD","TCGA-CD-A48C-01A","12:MARS:57490644:+:12:CLEC12A:9971577:+:rev","MARS--CLEC12A","ENSG00000166986","ENSG00000172322",9.0,1.0,1.0,1.0,0.917,0.0]
["TCGA_STAD","TCGA-CD-A4MH-01A","3:CNOT10:32737490:+:12:CACNA2D4:1846689:-:fusion","CNOT10--CACNA2D4","ENSG00000182973","ENSG00000151062",13.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_STAD","TCGA-CG-4304-01A","20:TTI1:38013700:-:20:AL049651.1:23016858:-:reg","TTI1--AL049651.1","ENSG00000101407","ENSG00000230492",9.0,1.0,1.0,1.0,0.847,0.0]
["TCGA_STAD","TCGA-CG-4441-01A","3:LPP:188154021:+:3:TPRG1:189310386:+:reg","LPP--TPRG1","ENSG00000145012","ENSG00000188001",8.0,1.0,1.0,1.0,0.399,0.00445524503848]
["TCGA_STAD","TCGA-CG-4444-01A","9:DDX58:32500805:-:9:PRSS3:33796643:+:strandcross","DDX58--PRSS3","ENSG00000107201","ENSG00000010438",415.0,1.0,1.0,1.0,0.997484628889414,0.0]
["TCGA_STAD","TCGA-CG-4449-01A","10:ASCC1:72196811:-:10:CDH23:71777680:+:strandcross","ASCC1--CDH23","ENSG00000138303","ENSG00000107736",10.0,1.0,1.0,1.0,0.592,0.00187617260788]
["TCGA_STAD","TCGA-CG-4449-01A","1:CASZ1:10705492:-:18:GATA6-AS1:22168383:-:fusion","CASZ1--GATA6-AS1","ENSG00000130940","ENSG00000266010",27.0,1.0,1.0,1.0,0.89473764083682,0.0]
["TCGA_STAD","TCGA-CG-4466-01A","2:MGAT5:134270550:+:2:MBD5:148458203:+:reg","MGAT5--MBD5","ENSG00000152127","ENSG00000204406",8.0,1.0,1.0,1.0,0.856,0.0]
["TCGA_STAD","TCGA-CG-4477-01A","17:METTL23:76729794:+:17:ENDOV:80436133:+:reg","METTL23--ENDOV","ENSG00000181038","ENSG00000173818",3.0,1.0,1.0,1.0,0.761,0.0]
["TCGA_STAD","TCGA-CG-5718-01A","20:ABHD12:25302219:-:20:NINL:25470095:-:rev","ABHD12--NINL","ENSG00000100997","ENSG00000101004",4.0,1.0,1.0,1.0,0.516,"NA"]
["TCGA_STAD","TCGA-CG-5725-01A","19:ZNF317:9140592:+:19:HNRNPM:8485603:+:rev","ZNF317--HNRNPM","ENSG00000130803","ENSG00000099783",2.0,1.0,1.0,1.0,0.506,"NA"]
["TCGA_STAD","TCGA-CG-5732-01A","X:SLC25A6:1391899:-:X:P2RY8:1466582:-:rev","SLC25A6--P2RY8","ENSG00000169100","ENSG00000182162",2.0,1.0,1.0,1.0,0.751,"NA"]
["TCGA_STAD","TCGA-D7-6526-01A","1:RLF:40161636:+:3:SLCO2A1:133979618:-:fusion","RLF--SLCO2A1","ENSG00000117000","ENSG00000174640",2.0,1.0,1.0,1.0,0.479,0.0]
["TCGA_STAD","TCGA-D7-6527-01A","5:CSNK1A1:149550075:-:17:MYO15B:75610166:+:fusion","CSNK1A1--MYO15B","ENSG00000113712","ENSG00000266714",20.0,1.0,1.0,1.0,0.728706297939183,0.0]
["TCGA_STAD","TCGA-D7-6820-01A","17:CDC42EP4:73310881:-:17:AMZ2:68248640:+:strandcross","CDC42EP4--AMZ2","ENSG00000179604","ENSG00000196704",8.0,1.0,1.0,1.0,0.322,7.96812749004E-4]
["TCGA_STAD","TCGA-D7-8570-01A","6:SENP6:75602576:+:8:STK3:98548161:-:fusion","SENP6--STK3","ENSG00000112701","ENSG00000104375",2.0,1.0,1.0,1.0,0.507,0.0]
["TCGA_STAD","TCGA-D7-8575-01A","15:ABHD17C:80696019:+:12:BHLHE41:26124582:-:fusion","ABHD17C--BHLHE41","ENSG00000136379","ENSG00000123095",16.0,1.0,1.0,1.0,0.776444267438066,0.0]
["TCGA_STAD","TCGA-D7-8579-01A","6:NUP153:17706277:-:15:ZNF280D:56693215:-:fusion","NUP153--ZNF280D","ENSG00000124789","ENSG00000137871",9.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_STAD","TCGA-D7-A4YX-01A","1:SNHG3:28506084:+:1:GNB1:1817875:-:strandcross","SNHG3--GNB1","ENSG00000180198","ENSG00000078369",3.0,1.0,1.0,1.0,0.153,0.0193548387097]
["TCGA_STAD","TCGA-D7-A6EV-01A","1:KIF1B:10210878:+:1:RPL5:92833389:+:reg","KIF1B--RPL5","ENSG00000054523","ENSG00000122406",5.0,1.0,1.0,1.0,0.604,0.00109170305677]
["TCGA_STAD","TCGA-D7-A6F0-01A","19:SPINT2:38283797:+:19:AC093227.3:37711692:-:strandcross","SPINT2--AC093227.3","ENSG00000167642","ENSG00000267552",15.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-D7-A6F2-01A","16:AC009135.2:5598961:+:3:RSRC1:158122103:+:fusion","AC009135.2--RSRC1","ENSG00000279877","ENSG00000174891",3.0,1.0,1.0,1.0,0.183,0.010718113612]
["TCGA_STAD","TCGA-EQ-A4SO-01A","5:RACK1:181241492:-:12:AC020656.1:69353608:-:fusion","RACK1--AC020656.1","ENSG00000204628","ENSG00000257764",3.0,3.0,1.0,1.0,0.265,0.00559910414334]
["TCGA_STAD","TCGA-FP-8099-01A","7:JAZF1:27895220:-:2:ACVR2A:147896301:+:fusion","JAZF1--ACVR2A","ENSG00000153814","ENSG00000121989",2.0,1.0,1.0,1.0,0.871,0.0]
["TCGA_STAD","TCGA-FP-8631-01A","11:RNH1:507113:-:1:AL031275.1:168774490:-:fusion","RNH1--AL031275.1","ENSG00000023191","ENSG00000235736",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_STAD","TCGA-FP-8631-01A","9:UBE2R2:33817934:+:9:ACO1:32448896:+:rev","UBE2R2--ACO1","ENSG00000107341","ENSG00000122729",6.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_STAD","TCGA-FP-A4BE-01A","3:CCNL1:157159792:-:16:VAC14:70783139:-:fusion","CCNL1--VAC14","ENSG00000163660","ENSG00000103043",2.0,1.0,1.0,1.0,0.807,0.0]
["TCGA_STAD","TCGA-FP-A8CX-01A","7:AC004951.4:44013593:-:7:TYW1:67055835:+:strandcross","AC004951.4--TYW1","ENSG00000214783","ENSG00000198874",3.0,1.0,1.0,1.0,0.525,0.0]
["TCGA_STAD","TCGA-HF-7131-01A","3:RASA2:141529802:+:3:ZBTB38:141427634:+:rev","RASA2--ZBTB38","ENSG00000155903","ENSG00000177311",2.0,1.0,1.0,1.0,0.673,"NA"]
["TCGA_STAD","TCGA-HF-7133-01A","15:CGNL1:57453818:+:15:TCF12:57231152:+:rev","CGNL1--TCF12","ENSG00000128849","ENSG00000140262",3.0,1.0,1.0,1.0,0.943,"NA"]
["TCGA_STAD","TCGA-HF-A5NB-01A","9:TJP2:69212601:+:9:PIP5K1B:68934890:+:rev","TJP2--PIP5K1B","ENSG00000119139","ENSG00000107242",1.0,1.0,1.0,1.0,0.922,"NA"]
["TCGA_STAD","TCGA-HU-8604-01A","8:PLEKHA2:38918070:+:8:RAB11FIP1:37877551:-:strandcross","PLEKHA2--RAB11FIP1","ENSG00000169499","ENSG00000156675",4.0,2.0,1.0,1.0,0.858,0.00108342361863]
["TCGA_STAD","TCGA-HU-A4G3-01A","10:LARP4B:884447:-:10:WDR37:1124218:+:strandcross","LARP4B--WDR37","ENSG00000107929","ENSG00000047056",3.0,1.0,1.0,1.0,0.904,0.0]
["TCGA_STAD","TCGA-HU-A4GC-01A","8:PCMTD1:51898930:-:8:MFHAS1:8797491:-:reg","PCMTD1--MFHAS1","ENSG00000168300","ENSG00000147324",3.0,1.0,1.0,1.0,0.801,0.0]
["TCGA_STAD","TCGA-HU-A4GH-01A","15:ZNF280D:56704121:-:15:RNF111:59080936:+:strandcross","ZNF280D--RNF111","ENSG00000137871","ENSG00000157450",6.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-HU-A4GH-01A","17:PSMD11:32444614:+:17:RHOT1:32253085:+:rev","PSMD11--RHOT1","ENSG00000108671","ENSG00000126858",9.0,1.0,1.0,1.0,0.96,"NA"]
["TCGA_STAD","TCGA-HU-A4GH-01A","8:RNF19A:100274953:-:8:SNX31:100636011:-:rev","RNF19A--SNX31","ENSG00000034677","ENSG00000174226",4.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_STAD","TCGA-HU-A4GP-01A","7:CUX1:101816093:+:20:GNAS:58895612:+:fusion","CUX1--GNAS","ENSG00000257923","ENSG00000087460",4.0,1.0,2.0,1.0,0.996,0.0]
["TCGA_STAD","TCGA-HU-A4H0-01A","3:CTNNB1:41199670:+:3:ULK4:41663699:-:strandcross","CTNNB1--ULK4","ENSG00000168036","ENSG00000168038",3.0,4.0,2.0,2.0,0.969,0.0]
["TCGA_STAD","TCGA-HU-A4H2-01A","2:ACSL3:222934687:+:19:DMKN:35497538:-:fusion","ACSL3--DMKN","ENSG00000123983","ENSG00000161249",4.0,1.0,1.0,1.0,0.836,0.0]
["TCGA_STAD","TCGA-HU-A4H3-01A","15:RORA-AS1:60479398:+:12:ERGIC2:29341816:-:fusion","RORA-AS1--ERGIC2","ENSG00000245534","ENSG00000087502",4.0,1.0,1.0,1.0,0.775,0.0]
["TCGA_STAD","TCGA-HU-A4H5-01A","1:RFWD2:176162869:-:1:LRRC52:165563505:+:strandcross","RFWD2--LRRC52","ENSG00000143207","ENSG00000162763",10.0,1.0,1.0,1.0,0.866,0.0]
["TCGA_STAD","TCGA-HU-A4H6-01A","10:MTG1:133402773:+:19:ZNF350:51982031:-:fusion","MTG1--ZNF350","ENSG00000254536","ENSG00000256683",39.0,1.0,1.0,1.0,0.616692726517288,0.0010395010395]
["TCGA_STAD","TCGA-HU-A4HB-01A","16:PMM2:8813106:+:16:RBFOX1:7518147:+:rev","PMM2--RBFOX1","ENSG00000140650","ENSG00000078328",8.0,1.0,1.0,1.0,0.514,0.0]
["TCGA_STAD","TCGA-HU-A4HD-01A","11:TIRAP:126290961:+:11:FOXRED1:126272969:+:rev","TIRAP--FOXRED1","ENSG00000150455","ENSG00000110074",5.0,1.0,1.0,1.0,0.784,"NA"]
["TCGA_STAD","TCGA-IN-8462-01A","14:TMEM260:56585912:+:14:AL163953.1:53600183:-:strandcross","TMEM260--AL163953.1","ENSG00000070269","ENSG00000225680",3.0,1.0,1.0,1.0,0.836,0.0]
["TCGA_STAD","TCGA-IN-A6RI-01A","19:AP1M2:10583606:-:19:CACNA1A:13455189:-:rev","AP1M2--CACNA1A","ENSG00000129354","ENSG00000141837",28.0,1.0,1.0,1.0,0.836290413594234,0.0]
["TCGA_STAD","TCGA-IN-A6RN-01A","11:STIM1:3856409:+:11:PGAP2:3823883:+:rev","STIM1--PGAP2","ENSG00000167323","ENSG00000148985",1.0,1.0,1.0,1.0,0.851,"NA"]
["TCGA_STAD","TCGA-IN-A6RO-01A","19:GATAD2A:19406019:+:17:RETREG3:42586137:-:fusion","GATAD2A--RETREG3","ENSG00000167491","ENSG00000141699",5.0,1.0,1.0,1.0,0.275,0.00169779286927]
["TCGA_STAD","TCGA-IN-A6RO-01A","19:GATAD2A:19406019:+:17:RETREG3:42586891:-:fusion","GATAD2A--RETREG3","ENSG00000167491","ENSG00000141699",14.0,1.0,1.0,1.0,0.922,0.0]
["TCGA_STAD","TCGA-IN-A7NU-01A","18:LAMA3:23933935:+:18:OSBPL1A:24312106:-:strandcross","LAMA3--OSBPL1A","ENSG00000053747","ENSG00000141447",58.0,1.0,1.0,1.0,0.947792675584286,0.0]
["TCGA_STAD","TCGA-IN-AB1X-01A","14:PPP2R5C:101856885:+:14:FOXN3:89412490:-:strandcross","PPP2R5C--FOXN3","ENSG00000078304","ENSG00000053254",9.0,1.0,1.0,1.0,0.458,0.0015026296018]
["TCGA_STAD","TCGA-IP-7968-01A","12:MRPS35:27716458:+:12:ETFRF1:25204091:+:rev","MRPS35--ETFRF1","ENSG00000061794","ENSG00000205707",21.0,1.0,1.0,1.0,0.810950941260035,6.37755102041E-4]
["TCGA_STAD","TCGA-KB-A93H-01A","8:KIF13B:29262980:-:20:IFT52:43618940:+:fusion","KIF13B--IFT52","ENSG00000197892","ENSG00000101052",13.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_STAD","TCGA-KB-A93J-01A","19:SERTAD3:40444215:-:15:AC104574.2:61507240:-:fusion","SERTAD3--AC104574.2","ENSG00000167565","ENSG00000259616",15.0,1.0,1.0,1.0,0.691,0.0]
["TCGA_STAD","TCGA-MX-A663-01A","17:SLC38A10:81251493:-:17:OGFOD3:82411530:-:rev","SLC38A10--OGFOD3","ENSG00000157637","ENSG00000181396",16.0,1.0,1.0,1.0,0.673540866544974,0.0]
["TCGA_STAD","TCGA-MX-A666-01A","5:RICTOR:39074111:-:5:LINC01470:152684785:-:rev","RICTOR--LINC01470","ENSG00000164327","ENSG00000249484",2.0,1.0,1.0,1.0,0.835,0.0]
["TCGA_STAD","TCGA-R5-A7ZE-01B","1:CDC42:22052742:+:17:AXIN2:65535721:-:fusion","CDC42--AXIN2","ENSG00000070831","ENSG00000168646",3.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_STAD","TCGA-R5-A7ZI-01A","X:ZNF41:47467410:-:X:UXT:47652144:-:rev","ZNF41--UXT","ENSG00000147124","ENSG00000126756",2.0,1.0,1.0,1.0,0.954,"NA"]
["TCGA_STAD","TCGA-RD-A7BT-01A","17:LYRM9:27880121:-:17:HAP1:41728331:-:rev","LYRM9--HAP1","ENSG00000232859","ENSG00000173805",5.0,1.0,1.0,1.0,0.83,0.0]
["TCGA_STAD","TCGA-RD-A7BT-01A","17:WIPF2:40219492:+:X:CD99:2738200:+:fusion","WIPF2--CD99","ENSG00000171475","ENSG00000002586",34.0,1.0,1.0,1.0,0.86353284356448,0.0]
["TCGA_STAD","TCGA-RD-A7BT-01A","9:OSTF1:75088726:+:9:MAMDC2:70108211:+:rev","OSTF1--MAMDC2","ENSG00000134996","ENSG00000165072",3.0,1.0,1.0,1.0,0.205,0.0115074798619]
["TCGA_STAD","TCGA-RD-A8MW-01A","18:NEDD4L:58044708:+:18:SMAD2:47841950:-:strandcross","NEDD4L--SMAD2","ENSG00000049759","ENSG00000175387",4.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-RD-A8MW-01A","6:SEC63:107893482:-:12:PCBP2:53459272:+:fusion","SEC63--PCBP2","ENSG00000025796","ENSG00000257379",75.0,1.0,1.0,1.0,0.818990464335418,0.00109409190372]
["TCGA_STAD","TCGA-RD-A8N4-01A","11:GAB2:78417646:-:1:SZT2:43429703:+:fusion","GAB2--SZT2","ENSG00000033327","ENSG00000198198",3.0,1.0,1.0,1.0,0.28,0.0]
["TCGA_STAD","TCGA-RD-A8N6-01A","9:KIAA1958:112487118:+:3:PLSCR1:146536565:-:fusion","KIAA1958--PLSCR1","ENSG00000165185","ENSG00000188313",3.0,1.0,1.0,1.0,0.759,0.0]
["TCGA_STAD","TCGA-VQ-A8DU-01A","16:NFAT5:69568548:+:16:VPS4A:69324208:+:rev","NFAT5--VPS4A","ENSG00000102908","ENSG00000132612",4.0,1.0,1.0,1.0,0.983,"NA"]
["TCGA_STAD","TCGA-VQ-A8DU-01A","5:SNCAIP:122311838:+:5:SRFBP1:122026942:+:rev","SNCAIP--SRFBP1","ENSG00000064692","ENSG00000151304",6.0,1.0,1.0,1.0,0.943,"NA"]
["TCGA_STAD","TCGA-VQ-A8DV-01A","2:AGPS:177482186:+:4:UBE2K:39774834:+:fusion","AGPS--UBE2K","ENSG00000018510","ENSG00000078140",4.0,1.0,1.0,1.0,0.874,0.0]
["TCGA_STAD","TCGA-VQ-A8DZ-01A","21:TMPRSS2:41488394:-:21:SETD4:36057204:-:reg","TMPRSS2--SETD4","ENSG00000184012","ENSG00000185917",5.0,1.0,1.0,1.0,0.192,0.00690846286701]
["TCGA_STAD","TCGA-VQ-A8E0-01A","4:KIAA0232:6782841:+:4:MRFAP1:6641730:+:rev","KIAA0232--MRFAP1","ENSG00000170871","ENSG00000179010",3.0,1.0,2.0,1.0,0.416,"NA"]
["TCGA_STAD","TCGA-VQ-A8E2-01A","3:CPNE4:132034567:-:3:ACAD11:132561217:-:rev","CPNE4--ACAD11","ENSG00000196353","ENSG00000240303",3.0,1.0,1.0,1.0,0.555,"NA"]
["TCGA_STAD","TCGA-VQ-A8PE-01A","17:ETV4:43544975:-:11:CHID1:870499:-:fusion","ETV4--CHID1","ENSG00000175832","ENSG00000177830",18.0,1.0,1.0,1.0,0.496119191034573,0.0]
["TCGA_STAD","TCGA-VQ-A8PE-01A","6:ZFAND3:37820016:+:6:RPS10-NUDT3:34288931:-:strandcross","ZFAND3--RPS10-NUDT3","ENSG00000156639","ENSG00000272325",3.0,1.0,1.0,1.0,0.888,0.0]
["TCGA_STAD","TCGA-VQ-A8PE-01A","1:DCAF8:160237135:-:1:PEX19:160283639:-:rev","DCAF8--PEX19","ENSG00000132716","ENSG00000162735",13.0,1.0,1.0,1.0,0.824,"NA"]
["TCGA_STAD","TCGA-VQ-A8PH-01A","20:ADNP:50928651:-:20:SLPI:45253733:-:reg","ADNP--SLPI","ENSG00000101126","ENSG00000124107",10.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_STAD","TCGA-VQ-A8PH-01A","1:SMG7:183472649:+:1:LAMC2:183207881:+:rev","SMG7--LAMC2","ENSG00000116698","ENSG00000058085",9.0,1.0,1.0,1.0,0.603,"NA"]
["TCGA_STAD","TCGA-VQ-A8PJ-01A","2:THADA:43485234:-:2:LRPPRC:43905780:-:rev","THADA--LRPPRC","ENSG00000115970","ENSG00000138095",2.0,1.0,1.0,1.0,0.685,"NA"]
["TCGA_STAD","TCGA-VQ-A8PM-01A","11:RNF169:74749382:+:11:POLD3:74594061:+:rev","RNF169--POLD3","ENSG00000166439","ENSG00000077514",2.0,1.0,1.0,1.0,0.414,"NA"]
["TCGA_STAD","TCGA-VQ-A8PX-01A","3:ARMC8:138187599:+:3:CLDN18:138029797:+:rev","ARMC8--CLDN18","ENSG00000114098","ENSG00000066405",4.0,1.0,1.0,1.0,0.941,"NA"]
["TCGA_STAD","TCGA-VQ-A91K-01A","1:TMEM59:54036610:-:1:SSBP3:54258149:-:rev","TMEM59--SSBP3","ENSG00000116209","ENSG00000157216",54.0,1.0,1.0,1.0,0.724296325448382,"NA"]
["TCGA_STAD","TCGA-VQ-A91N-01A","8:SLC39A14:22367408:+:8:DEFB135:11984421:+:rev","SLC39A14--DEFB135","ENSG00000104635","ENSG00000205883",15.0,1.0,1.0,1.0,0.569,0.0]
["TCGA_STAD","TCGA-VQ-A91S-01A","1:NPHP4:5947104:-:5:FAM71B:157163658:-:fusion","NPHP4--FAM71B","ENSG00000131697","ENSG00000170613",8.0,1.0,1.0,1.0,0.666,0.00121654501217]
["TCGA_STAD","TCGA-VQ-A91X-01A","17:PPP1R1B:39634086:+:17:ACLY:41898785:-:strandcross","PPP1R1B--ACLY","ENSG00000131771","ENSG00000131473",5.0,1.0,1.0,1.0,0.249,0.00211416490486]
["TCGA_STAD","TCGA-VQ-A922-01A","20:KIF16B:16573229:-:20:RRBP1:17660528:-:rev","KIF16B--RRBP1","ENSG00000089177","ENSG00000125844",6.0,2.0,1.0,1.0,0.886,0.0]
["TCGA_STAD","TCGA-VQ-A922-01A","13:TSC22D1:44573163:-:13:AL359706.1:45046741:-:rev","TSC22D1--AL359706.1","ENSG00000102804","ENSG00000223732",1.0,1.0,1.0,1.0,0.831,"NA"]
["TCGA_STAD","TCGA-VQ-A922-01A","3:BRK1:10115819:+:3:SETD5:9424467:+:rev","BRK1--SETD5","ENSG00000254999","ENSG00000168137",3.0,1.0,1.0,1.0,0.712,"NA"]
["TCGA_STAD","TCGA-VQ-A922-01A","9:PTPA:129137692:+:9:SPTAN1:128598400:+:rev","PTPA--SPTAN1","ENSG00000119383","ENSG00000197694",4.0,1.0,1.0,1.0,0.445,"NA"]
["TCGA_STAD","TCGA-VQ-A925-01A","1:VPS13D:12369702:+:20:ACSS2:34923323:+:fusion","VPS13D--ACSS2","ENSG00000048707","ENSG00000131069",3.0,1.0,1.0,1.0,0.407,0.0]
["TCGA_STAD","TCGA-VQ-A925-01A","7:AHR:17310123:+:7:BZW2:16704547:+:rev","AHR--BZW2","ENSG00000106546","ENSG00000136261",3.0,1.0,1.0,1.0,0.684,"NA"]
["TCGA_STAD","TCGA-VQ-A92D-01A","10:GBF1:102260116:+:10:LBX1-AS1:101232254:+:rev","GBF1--LBX1-AS1","ENSG00000107862","ENSG00000227128",2.0,2.0,2.0,2.0,0.946,0.0]
["TCGA_STAD","TCGA-VQ-A92D-01A","17:CACNB1:39191474:-:17:AC073508.2:40656630:-:rev","CACNB1--AC073508.2","ENSG00000067191","ENSG00000264058",101.0,1.0,1.0,1.0,0.881524855895779,0.0]
["TCGA_STAD","TCGA-VQ-A92D-01A","5:NIPBL:36976402:+:5:SPEF2:35704554:+:rev","NIPBL--SPEF2","ENSG00000164190","ENSG00000152582",7.0,1.0,1.0,1.0,0.878,0.0]
["TCGA_STAD","TCGA-VQ-A92D-01A","14:RPS29:49598400:-:14:MAP4K5:50504857:-:rev","RPS29--MAP4K5","ENSG00000213741","ENSG00000012983",6.0,1.0,1.0,1.0,0.911,"NA"]
["TCGA_STAD","TCGA-VQ-A92D-01A","14:WDHD1:54955561:-:14:DLGAP5:55177336:-:rev","WDHD1--DLGAP5","ENSG00000198554","ENSG00000126787",4.0,1.0,1.0,1.0,0.945,"NA"]
["TCGA_STAD","TCGA-VQ-A92D-01A","20:CTNNBL1:37694152:+:20:RPN2:37199050:+:rev","CTNNBL1--RPN2","ENSG00000132792","ENSG00000118705",2.0,1.0,1.0,1.0,0.964,"NA"]
["TCGA_STAD","TCGA-VQ-A94O-01A","17:SEPT9:77402703:+:17:CBX8:79796315:-:strandcross","SEPT9--CBX8","ENSG00000184640","ENSG00000141570",4.0,1.0,1.0,1.0,0.617,0.0]
["TCGA_STAD","TCGA-VQ-A94U-01A","4:ANTXR2:79977621:-:4:HSD17B13:87318436:-:rev","ANTXR2--HSD17B13","ENSG00000163297","ENSG00000170509",4.0,1.0,1.0,1.0,0.813,0.0]
["TCGA_STAD","TCGA-VQ-AA6D-01A","16:ADGRG1:57619881:+:16:BCAR4:11828391:-:strandcross","ADGRG1--BCAR4","ENSG00000205336","ENSG00000262117",6.0,1.0,1.0,1.0,0.894,0.00137931034483]
["TCGA_STAD","TCGA-VQ-AA6D-01A","19:TMEM91:41378519:+:19:RAB4B:40783778:+:rev","TMEM91--RAB4B","ENSG00000255730","ENSG00000268975",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_STAD","TCGA-VQ-AA6I-01A","7:ATXN7L1:105875812:-:7:EGFR:55142286:+:strandcross","ATXN7L1--EGFR","ENSG00000146776","ENSG00000146648",27.0,1.0,1.0,1.0,0.796805952387952,0.0]
["TCGA_STAD","TCGA-VQ-AA6I-01A","7:CUX1:101816093:+:7:LRRC17:102933774:+:reg","CUX1--LRRC17","ENSG00000257923","ENSG00000128606",2.0,1.0,1.0,1.0,0.268,0.00242130750605]
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["TCGA_UCS","TCGA-N7-A59B-01A","1:PPT1:40089410:-:1:HIVEP3:41700995:-:rev","PPT1--HIVEP3","ENSG00000131238","ENSG00000127124",3.0,1.0,1.0,1.0,0.928,0.0]
["TCGA_UCS","TCGA-N7-A59B-01A","20:GSS:34942931:-:17:AC135178.3:8381045:+:fusion","GSS--AC135178.3","ENSG00000100983","ENSG00000265749",42.0,1.0,1.0,1.0,0.954900533982449,0.0]
["TCGA_UCS","TCGA-N7-A59B-01A","4:ARAP2:36147296:-:5:PRRC1:127547819:+:fusion","ARAP2--PRRC1","ENSG00000047365","ENSG00000164244",4.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_UCS","TCGA-N7-A59B-01A","11:AP5B1:65780442:-:11:CFL1:65856242:-:rev","AP5B1--CFL1","ENSG00000254470","ENSG00000172757",3.0,1.0,1.0,1.0,0.919,"NA"]
["TCGA_UCS","TCGA-N7-A59B-01A","12:SP1:53383622:+:12:IGFBP6:53100712:+:rev","SP1--IGFBP6","ENSG00000185591","ENSG00000167779",5.0,1.0,1.0,1.0,0.5,"NA"]
["TCGA_UCS","TCGA-N7-A59B-01A","2:HDLBP:241315102:-:2:THAP4:241634079:-:rev","HDLBP--THAP4","ENSG00000115677","ENSG00000176946",3.0,1.0,1.0,1.0,0.918,"NA"]
["TCGA_UCS","TCGA-N8-A4PI-01A","17:VPS53:586270:-:17:SLC5A10:19013410:+:strandcross","VPS53--SLC5A10","ENSG00000141252","ENSG00000154025",3.0,1.0,1.0,1.0,0.665,0.00561797752809]
["TCGA_UCS","TCGA-N8-A4PI-01A","6:CCND3:42048501:-:1:LUZP1:23089053:-:fusion","CCND3--LUZP1","ENSG00000112576","ENSG00000169641",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_UCS","TCGA-N8-A4PI-01A","13:INTS6:51451025:-:13:NEK5:52037218:-:rev","INTS6--NEK5","ENSG00000102786","ENSG00000197168",2.0,1.0,1.0,1.0,0.751,"NA"]
["TCGA_UCS","TCGA-N8-A4PI-01A","1:LRRC40:70205390:-:1:ANKRD13C:70336099:-:rev","LRRC40--ANKRD13C","ENSG00000066557","ENSG00000118454",1.0,1.0,2.0,1.0,0.971,"NA"]
["TCGA_UCS","TCGA-N8-A4PI-01A","9:NUDT2:34329599:+:9:PRSS3:33796643:+:rev","NUDT2--PRSS3","ENSG00000164978","ENSG00000010438",2.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_UCS","TCGA-N8-A4PI-01A","9:NUDT2:34339166:+:9:PRSS3:33796643:+:rev","NUDT2--PRSS3","ENSG00000164978","ENSG00000010438",2.0,1.0,1.0,1.0,0.925,"NA"]
["TCGA_UCS","TCGA-N8-A4PL-01A","12:GATC:120455030:+:21:AF241725.1:21655107:-:fusion","GATC--AF241725.1","ENSG00000257218","ENSG00000237527",26.0,1.0,1.0,1.0,0.664498199108868,0.0100334448161]
["TCGA_UCS","TCGA-N8-A4PL-01A","17:MSI2:57262192:+:17:CISD3:38730760:+:rev","MSI2--CISD3","ENSG00000153944","ENSG00000277972",2.0,1.0,1.0,1.0,0.737,0.0066889632107]
["TCGA_UCS","TCGA-N8-A4PL-01A","17:MSI2:57401471:+:17:CISD3:38730760:+:rev","MSI2--CISD3","ENSG00000153944","ENSG00000277972",107.0,1.0,1.0,1.0,0.972662107688008,0.0]
["TCGA_UCS","TCGA-N8-A4PL-01A","19:LSM14A:34196763:+:12:AC090673.2:65935129:-:fusion","LSM14A--AC090673.2","ENSG00000257103","ENSG00000256083",10.0,1.0,1.0,1.0,0.666,0.0100334448161]
["TCGA_UCS","TCGA-N8-A4PL-01A","19:LSM14A:34196763:+:12:AC090673.2:65942693:-:fusion","LSM14A--AC090673.2","ENSG00000257103","ENSG00000256083",9.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_UCS","TCGA-N8-A4PL-01A","19:ZNF675:23687031:-:19:SLC27A1:17470540:+:strandcross","ZNF675--SLC27A1","ENSG00000197372","ENSG00000130304",3.0,1.0,1.0,1.0,0.657,0.0100334448161]
["TCGA_UCS","TCGA-N8-A4PL-01A","22:GRAMD4:46675552:+:17:DRC3:17992765:+:fusion","GRAMD4--DRC3","ENSG00000075240","ENSG00000171962",3.0,1.0,1.0,1.0,0.844,0.0066889632107]
["TCGA_UCS","TCGA-N8-A4PL-01A","2:KIF3C:25980373:-:1:SRM:11059345:-:fusion","KIF3C--SRM","ENSG00000084731","ENSG00000116649",7.0,1.0,1.0,1.0,0.841,0.0066889632107]
["TCGA_UCS","TCGA-N8-A4PL-01A","2:KIF3C:25980373:-:1:SRM:11059380:-:fusion","KIF3C--SRM","ENSG00000084731","ENSG00000116649",6.0,1.0,1.0,1.0,0.882,0.00334448160535]
["TCGA_UCS","TCGA-N8-A4PM-01A","17:PIP4K2B:38771014:-:1:AL035415.1:54420599:+:fusion","PIP4K2B--AL035415.1","ENSG00000276293","ENSG00000232245",52.0,1.0,1.0,1.0,0.718584552976096,0.00251889168766]
["TCGA_UCS","TCGA-N8-A4PM-01A","2:MSH2:47445657:+:9:SPTLC1:92038365:-:fusion","MSH2--SPTLC1","ENSG00000095002","ENSG00000090054",5.0,1.0,1.0,1.0,0.449,0.00755667506297]
["TCGA_UCS","TCGA-N8-A4PM-01A","1:ARNT:150876543:-:1:PI4KB:151316509:-:rev","ARNT--PI4KB","ENSG00000143437","ENSG00000143393",2.0,1.0,1.0,1.0,0.74,"NA"]
["TCGA_UCS","TCGA-N8-A4PM-01A","20:PREX1:48745025:-:20:KCNB1:49310799:-:rev","PREX1--KCNB1","ENSG00000124126","ENSG00000158445",16.0,1.0,1.0,1.0,0.842322537308876,"NA"]
["TCGA_UCS","TCGA-N8-A4PM-01A","20:TM9SF4:32155186:+:20:DEFB123:31450029:+:rev","TM9SF4--DEFB123","ENSG00000101337","ENSG00000180424",71.0,1.0,1.0,1.0,0.833304839516374,"NA"]
["TCGA_UCS","TCGA-N8-A4PM-01A","3:MAP4:48088773:-:3:CDC25A:48174457:-:rev","MAP4--CDC25A","ENSG00000047849","ENSG00000164045",2.0,2.0,1.0,1.0,0.705,"NA"]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:MAP1S:17733428:+:19:CRTC1:18742910:+:reg","MAP1S--CRTC1","ENSG00000130479","ENSG00000105662",5.0,1.0,1.0,1.0,0.711,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:PAK4:39125919:+:X:RPGR:38291484:-:fusion","PAK4--RPGR","ENSG00000130669","ENSG00000156313",2.0,1.0,1.0,1.0,0.728,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:SUPT5H:39445965:+:20:PLCG1-AS1:41098824:-:fusion","SUPT5H--PLCG1-AS1","ENSG00000196235","ENSG00000226648",48.0,1.0,1.0,1.0,0.932518544284911,0.00571428571429]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:SUPT5H:39445965:+:20:PLCG1-AS1:41100792:-:fusion","SUPT5H--PLCG1-AS1","ENSG00000196235","ENSG00000226648",8.0,1.0,1.0,1.0,0.409,0.0114285714286]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:SUPT5H:39445965:+:20:PLCG1-AS1:41101289:-:fusion","SUPT5H--PLCG1-AS1","ENSG00000196235","ENSG00000226648",67.0,1.0,1.0,1.0,0.937983189179804,0.00285714285714]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:TMED1:10834934:-:15:AC023300.2:74311958:-:fusion","TMED1--AC023300.2","ENSG00000099203","ENSG00000277749",7.0,1.0,1.0,1.0,0.535,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:TMED1:10834934:-:15:AC023300.2:74319688:-:fusion","TMED1--AC023300.2","ENSG00000099203","ENSG00000277749",2.0,1.0,1.0,1.0,0.172,0.0342857142857]
["TCGA_UCS","TCGA-N8-A4PN-01A","1:FAM212B:111739186:-:20:BCAS4:50876486:+:fusion","FAM212B--BCAS4","ENSG00000197852","ENSG00000124243",52.0,1.0,1.0,1.0,0.730783124940711,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:DLGAP4:36461510:+:20:TP53TG5:45377613:-:strandcross","DLGAP4--TP53TG5","ENSG00000080845","ENSG00000124251",17.0,1.0,1.0,1.0,0.827298957782779,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:DLGAP4:36462599:+:20:TP53TG5:45377613:-:strandcross","DLGAP4--TP53TG5","ENSG00000080845","ENSG00000124251",49.0,1.0,1.0,1.0,0.959034708226374,0.00285714285714]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:DLGAP4:36465367:+:20:TP53TG5:45377613:-:strandcross","DLGAP4--TP53TG5","ENSG00000080845","ENSG00000124251",8.0,1.0,1.0,1.0,0.974,0.00285714285714]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:RPN2:37230059:+:20:ZBTB46:63790790:-:strandcross","RPN2--ZBTB46","ENSG00000118705","ENSG00000130584",6.0,1.0,1.0,1.0,0.853,0.00571428571429]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:SERINC3:44511289:-:20:NCOA5:46062889:-:rev","SERINC3--NCOA5","ENSG00000132824","ENSG00000124160",73.0,1.0,1.0,1.0,0.894400441111703,0.00571428571429]
["TCGA_UCS","TCGA-N8-A4PN-01A","20:TSHZ2:52973333:+:20:TOX2:43973367:+:rev","TSHZ2--TOX2","ENSG00000182463","ENSG00000124191",15.0,1.0,1.0,1.0,0.808,0.00857142857143]
["TCGA_UCS","TCGA-N8-A4PN-01A","3:TMEM41A:185488945:-:1:EPHA2:16150963:-:fusion","TMEM41A--EPHA2","ENSG00000163900","ENSG00000142627",4.0,1.0,1.0,1.0,0.989,0.00285714285714]
["TCGA_UCS","TCGA-N8-A4PN-01A","5:FGFR4:177089940:+:17:ACTG1:81511626:-:fusion","FGFR4--ACTG1","ENSG00000160867","ENSG00000184009",4.0,1.0,2.0,1.0,0.27,0.0228571428571]
["TCGA_UCS","TCGA-N8-A4PN-01A","12:ITPR2:26790157:-:12:AC092747.1:27105258:-:rev","ITPR2--AC092747.1","ENSG00000123104","ENSG00000256226",2.0,1.0,1.0,1.0,0.46,"NA"]
["TCGA_UCS","TCGA-N8-A4PN-01A","19:HNRNPM:8462581:+:19:MCOLN1:7527520:+:rev","HNRNPM--MCOLN1","ENSG00000099783","ENSG00000090674",20.0,1.0,1.0,1.0,0.839380985888378,"NA"]
["TCGA_UCS","TCGA-N8-A4PO-01A","17:CDC27:47181562:-:19:PTPRS:5159104:-:fusion","CDC27--PTPRS","ENSG00000004897","ENSG00000105426",42.0,1.0,1.0,1.0,0.760762111466006,0.00261096605744]
["TCGA_UCS","TCGA-N8-A4PO-01A","19:MYH14:50301869:+:3:FBLN2:13608062:+:fusion","MYH14--FBLN2","ENSG00000105357","ENSG00000163520",3.0,1.0,1.0,1.0,0.857,0.00261096605744]
["TCGA_UCS","TCGA-N8-A4PO-01A","2:NBAS:15415546:-:18:SPIRE1:12512531:-:fusion","NBAS--SPIRE1","ENSG00000151779","ENSG00000134278",2.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_UCS","TCGA-N8-A4PO-01A","2:ZNF638:71408247:+:8:TRIM55:66174471:+:fusion","ZNF638--TRIM55","ENSG00000075292","ENSG00000147573",30.0,1.0,1.0,1.0,0.884567561287001,0.00261096605744]
["TCGA_UCS","TCGA-N8-A4PO-01A","3:SMARCC1:47635190:-:3:LINC01983:195836615:-:rev","SMARCC1--LINC01983","ENSG00000173473","ENSG00000223783",25.0,1.0,1.0,1.0,0.69278103987928,0.00783289817232]
["TCGA_UCS","TCGA-N8-A4PP-01A","11:CRY2:45858873:+:11:C11orf49:47052388:+:reg","CRY2--C11orf49","ENSG00000121671","ENSG00000149179",2.0,1.0,1.0,1.0,0.616,0.00877192982456]
["TCGA_UCS","TCGA-N8-A4PP-01A","11:SPON1:14041654:+:12:THAP2:71674203:+:fusion","SPON1--THAP2","ENSG00000262655","ENSG00000173451",21.0,1.0,1.0,1.0,0.902011170515494,0.00292397660819]
["TCGA_UCS","TCGA-N8-A4PP-01A","19:ZNF546:40008565:+:4:HNRNPD:82359639:-:fusion","ZNF546--HNRNPD","ENSG00000187187","ENSG00000138668",17.0,1.0,1.0,1.0,0.767344792786514,0.00584795321637]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:ENSA:150625642:-:1:KLHDC9:161099346:+:strandcross","ENSA--KLHDC9","ENSG00000143420","ENSG00000162755",11.0,1.0,1.0,1.0,0.71,0.00584795321637]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:ENSA:150625642:-:1:KLHDC9:161100061:+:strandcross","ENSA--KLHDC9","ENSG00000143420","ENSG00000162755",24.0,1.0,1.0,1.0,0.233954822331252,0.0321637426901]
["TCGA_UCS","TCGA-N8-A4PP-01A","3:RAB7A:128807671:+:19:TRMT1:13110306:-:fusion","RAB7A--TRMT1","ENSG00000075785","ENSG00000104907",4.0,1.0,1.0,1.0,0.887,0.00292397660819]
["TCGA_UCS","TCGA-N8-A4PP-01A","9:RCL1:4841357:+:1:SMCP:152884403:+:fusion","RCL1--SMCP","ENSG00000120158","ENSG00000163206",4.0,1.0,1.0,1.0,0.442,0.0175438596491]
["TCGA_UCS","TCGA-N8-A4PP-01A","11:STX5:62824166:-:11:WDR74:62839659:-:rev","STX5--WDR74","ENSG00000162236","ENSG00000133316",1.0,2.0,3.0,2.0,0.839,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","12:BICD1:32216459:+:12:KIAA1551:31980878:+:rev","BICD1--KIAA1551","ENSG00000151746","ENSG00000174718",2.0,1.0,1.0,1.0,0.712,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","12:PCBP2:53471807:+:12:SP1:53406585:+:rev","PCBP2--SP1","ENSG00000197111","ENSG00000185591",4.0,1.0,1.0,1.0,0.845,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","12:RAB5B:55974139:+:12:DGKA:55936423:+:rev","RAB5B--DGKA","ENSG00000111540","ENSG00000065357",28.0,1.0,1.0,1.0,0.921235524198255,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:CHTOP:153634343:+:1:S100A1:153628427:+:rev","CHTOP--S100A1","ENSG00000160679","ENSG00000160678",95.0,1.0,1.0,1.0,0.686315066308497,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:CHTOP:153634343:+:1:S100A1:153630509:+:rev","CHTOP--S100A1","ENSG00000160679","ENSG00000160678",95.0,1.0,1.0,1.0,0.904195019032974,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:CHTOP:153634343:+:1:S100A1:153631512:+:rev","CHTOP--S100A1","ENSG00000160679","ENSG00000160678",2.0,1.0,1.0,1.0,0.96,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","1:CHTOP:153634343:+:1:S100A1:153631698:+:rev","CHTOP--S100A1","ENSG00000160679","ENSG00000160678",17.0,1.0,1.0,1.0,0.568473944368088,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","2:MGAT4A:98663046:-:2:KIAA1211L:98794671:-:rev","MGAT4A--KIAA1211L","ENSG00000071073","ENSG00000196872",16.0,1.0,1.0,1.0,0.861726929603667,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","5:TXNDC15:134893655:+:5:C5orf24:134857357:+:rev","TXNDC15--C5orf24","ENSG00000113621","ENSG00000181904",5.0,1.0,1.0,1.0,0.442,"NA"]
["TCGA_UCS","TCGA-N8-A4PQ-01A","11:CREBZF:85682717:-:11:NARS2:78493195:-:reg","CREBZF--NARS2","ENSG00000137504","ENSG00000137513",3.0,1.0,1.0,1.0,0.88,0.00259067357513]
["TCGA_UCS","TCGA-N8-A4PQ-01A","16:ZNF423:49730771:-:10:CCAR1:68786136:+:fusion","ZNF423--CCAR1","ENSG00000102935","ENSG00000060339",50.0,1.0,1.0,1.0,0.799801862840737,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:ANKFN1:56227957:+:17:HIGD1B:44850332:+:rev","ANKFN1--HIGD1B","ENSG00000153930","ENSG00000131097",4.0,1.0,1.0,1.0,0.635,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:GNA13:65053502:-:17:MXRA7:76677702:-:rev","GNA13--MXRA7","ENSG00000120063","ENSG00000182534",2.0,1.0,1.0,1.0,0.985,0.00259067357513]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:GNA13:65053502:-:17:MXRA7:76685165:-:rev","GNA13--MXRA7","ENSG00000120063","ENSG00000182534",29.0,1.0,1.0,1.0,0.670491510672188,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:MPRIP:17078076:+:17:HOXB13:48727043:-:strandcross","MPRIP--HOXB13","ENSG00000133030","ENSG00000159184",35.0,1.0,1.0,1.0,0.827233616436592,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:NCOR1:16171803:-:17:MPRIP:17075710:+:strandcross","NCOR1--MPRIP","ENSG00000141027","ENSG00000133030",3.0,1.0,1.0,1.0,0.25,0.0181347150259]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:NCOR1:16186554:-:17:AC099850.1:59117924:+:strandcross","NCOR1--AC099850.1","ENSG00000141027","ENSG00000224738",6.0,1.0,1.0,1.0,0.266,0.0181347150259]
["TCGA_UCS","TCGA-N8-A4PQ-01A","17:TLK2:62481206:+:17:FN3KRP:82718906:+:reg","TLK2--FN3KRP","ENSG00000146872","ENSG00000141560",8.0,1.0,1.0,1.0,0.648,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","1:ACOT11:54542437:+:17:GIP:48967253:-:fusion","ACOT11--GIP","ENSG00000162390","ENSG00000159224",15.0,1.0,1.0,1.0,0.618,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","1:SOX13:204073711:+:1:PPFIA4:203053753:+:rev","SOX13--PPFIA4","ENSG00000143842","ENSG00000143847",2.0,1.0,1.0,1.0,0.828,0.00518134715026]
["TCGA_UCS","TCGA-N8-A4PQ-01A","22:MKL1:40552106:-:2:INPP5D:233169305:+:fusion","MKL1--INPP5D","ENSG00000196588","ENSG00000168918",7.0,1.0,1.0,1.0,0.383,0.0181347150259]
["TCGA_UCS","TCGA-N8-A4PQ-01A","2:DGKD:233390483:+:22:SLC25A17:40779125:-:fusion","DGKD--SLC25A17","ENSG00000077044","ENSG00000100372",13.0,1.0,1.0,1.0,0.166,0.0259067357513]
["TCGA_UCS","TCGA-N8-A4PQ-01A","14:RCOR1:102593325:+:14:TECPR2:102496979:+:rev","RCOR1--TECPR2","ENSG00000089902","ENSG00000196663",2.0,2.0,2.0,2.0,0.784,"NA"]
["TCGA_UCS","TCGA-N8-A4PQ-01A","22:SPECC1L-ADORA2A:24414744:+:22:CABIN1:24134302:+:rev","SPECC1L-ADORA2A--CABIN1","ENSG00000258555","ENSG00000099991",5.0,1.0,1.0,1.0,0.736,"NA"]
["TCGA_UCS","TCGA-N8-A4PQ-01A","4:CCSER1:90127831:+:4:AC097478.1:89719826:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",1.0,3.0,3.0,2.0,0.948,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","11:KCNQ1:2588854:+:11:B4GALNT4:372662:+:rev","KCNQ1--B4GALNT4","ENSG00000053918","ENSG00000182272",1.0,1.0,1.0,1.0,0.767,0.0059880239521]
["TCGA_UCS","TCGA-N8-A56S-01A","16:ZDHHC7:85011286:-:3:NPHP3-ACAD11:132631479:-:fusion","ZDHHC7--NPHP3-ACAD11","ENSG00000153786","ENSG00000240303",9.0,1.0,1.0,1.0,0.836,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","17:KANSL1:46223671:-:17:SPOP:49636809:-:rev","KANSL1--SPOP","ENSG00000120071","ENSG00000121067",13.0,1.0,1.0,1.0,0.582,0.0119760479042]
["TCGA_UCS","TCGA-N8-A56S-01A","17:SCRN2:47838270:-:17:GIP:48964480:-:rev","SCRN2--GIP","ENSG00000141295","ENSG00000159224",8.0,1.0,1.0,1.0,0.401,0.0239520958084]
["TCGA_UCS","TCGA-N8-A56S-01A","17:SNX11:48107596:+:17:SNF8:48943975:-:strandcross","SNX11--SNF8","ENSG00000002919","ENSG00000159210",9.0,1.0,1.0,1.0,0.54,0.0149700598802]
["TCGA_UCS","TCGA-N8-A56S-01A","17:SNX11:48107838:+:17:SNF8:48943975:-:strandcross","SNX11--SNF8","ENSG00000002919","ENSG00000159210",58.0,1.0,1.0,1.0,0.219282677860512,0.0359281437126]
["TCGA_UCS","TCGA-N8-A56S-01A","17:SNX11:48110767:+:17:SNF8:48943975:-:strandcross","SNX11--SNF8","ENSG00000002919","ENSG00000159210",4.0,1.0,1.0,1.0,0.824,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","1:DSTYK:205211271:-:1:CSRP1:201485376:-:reg","DSTYK--CSRP1","ENSG00000133059","ENSG00000159176",10.0,1.0,1.0,1.0,0.966,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","1:IPO9-AS1:201821961:-:1:COL16A1:31686279:-:reg","IPO9-AS1--COL16A1","ENSG00000231871","ENSG00000084636",3.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_UCS","TCGA-N8-A56S-01A","20:SRC:37365277:+:15:LINC02206:66931824:-:fusion","SRC--LINC02206","ENSG00000197122","ENSG00000259289",3.0,1.0,1.0,1.0,0.77,0.0059880239521]
["TCGA_UCS","TCGA-N8-A56S-01A","6:ZFAND3:37929999:+:3:AC024559.1:193996109:+:fusion","ZFAND3--AC024559.1","ENSG00000156639","ENSG00000238043",14.0,1.0,1.0,1.0,0.581,0.0119760479042]
["TCGA_UCS","TCGA-N8-A56S-01A","7:AP1S1:101154517:+:19:PTOV1:49854406:+:fusion","AP1S1--PTOV1","ENSG00000106367","ENSG00000104960",54.0,1.0,1.0,1.0,0.787220919301482,0.0059880239521]
["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:127796071:+:20:HCK:32084391:+:fusion","PVT1--HCK","ENSG00000249859","ENSG00000101336",3.0,1.0,1.0,1.0,0.932,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:128010444:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",24.0,3.0,1.0,1.0,0.870681077630388,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:128070272:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",75.0,1.0,1.0,1.0,0.728484501025797,0.0059880239521]
["TCGA_UCS","TCGA-N8-A56S-01A","8:ZHX2:122781946:+:2:PPM1B:44201186:+:fusion","ZHX2--PPM1B","ENSG00000178764","ENSG00000138032",6.0,1.0,1.0,1.0,0.971,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","9:KIF24:34286617:-:9:ZCCHC7:37327799:+:strandcross","KIF24--ZCCHC7","ENSG00000186638","ENSG00000147905",7.0,1.0,1.0,1.0,0.952,0.00299401197605]
["TCGA_UCS","TCGA-N8-A56S-01A","11:ARRB1:75287315:-:11:GDPD5:75462889:-:rev","ARRB1--GDPD5","ENSG00000137486","ENSG00000158555",10.0,1.0,1.0,1.0,0.535,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","11:DNAJC4:64230940:+:11:RARRES3:63539516:+:rev","DNAJC4--RARRES3","ENSG00000110011","ENSG00000133321",14.0,1.0,1.0,1.0,0.953,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","12:ACVR1B:51991993:+:12:AC068987.1:51850261:+:rev","ACVR1B--AC068987.1","ENSG00000135503","ENSG00000259887",10.0,1.0,1.0,1.0,0.836,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","12:LRP6:12244262:-:12:DUSP16:12521463:-:rev","LRP6--DUSP16","ENSG00000070018","ENSG00000111266",5.0,1.0,1.0,1.0,0.59,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","16:RMI2:11249778:+:16:CLEC16A:11120615:+:rev","RMI2--CLEC16A","ENSG00000175643","ENSG00000038532",2.0,1.0,1.0,1.0,0.459,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","16:RMI2:11345766:+:16:CLEC16A:11120615:+:rev","RMI2--CLEC16A","ENSG00000175643","ENSG00000038532",4.0,1.0,1.0,1.0,0.915,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","17:BPTF:67866687:+:17:NOL11:67743743:+:rev","BPTF--NOL11","ENSG00000171634","ENSG00000130935",7.0,1.0,1.0,1.0,0.667,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","17:NDEL1:8460160:+:17:AC135178.4:8338423:+:rev","NDEL1--AC135178.4","ENSG00000166579","ENSG00000266279",4.0,1.0,1.0,1.0,0.799,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","19:ACTN4:38718074:+:19:SPINT2:38283627:+:rev","ACTN4--SPINT2","ENSG00000130402","ENSG00000167642",3.0,1.0,1.0,1.0,0.58,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","19:SLC1A6:14964319:-:19:AKAP8L:15380612:-:rev","SLC1A6--AKAP8L","ENSG00000105143","ENSG00000011243",2.0,1.0,1.0,1.0,0.497,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","1:ACOT7:6281102:-:1:DNAJC11:6667810:-:rev","ACOT7--DNAJC11","ENSG00000097021","ENSG00000007923",5.0,1.0,1.0,1.0,0.464,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","20:KIF3B:32277765:+:20:TM9SF4:32165295:+:rev","KIF3B--TM9SF4","ENSG00000101350","ENSG00000101337",10.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","21:DNAJC28:33491602:-:21:GART:33506104:-:rev","DNAJC28--GART","ENSG00000177692","ENSG00000159131",5.0,1.0,1.0,1.0,0.462,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","22:EMID1:29215630:+:22:KREMEN1:29094258:+:rev","EMID1--KREMEN1","ENSG00000186998","ENSG00000183762",4.0,1.0,1.0,1.0,0.799,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","2:ASB1:238433695:+:2:RBM44:237833997:+:rev","ASB1--RBM44","ENSG00000065802","ENSG00000177483",6.0,1.0,1.0,1.0,0.693,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","3:PLCXD2:111732703:+:3:CD96:111623754:+:rev","PLCXD2--CD96","ENSG00000240891","ENSG00000153283",3.0,1.0,1.0,1.0,0.932,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","3:SENP2:185626393:+:3:MAP3K13:185463550:+:rev","SENP2--MAP3K13","ENSG00000163904","ENSG00000073803",1.0,1.0,1.0,1.0,0.968,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","5:AC008667.1:139721967:+:5:AC011405.1:139051002:+:rev","AC008667.1--AC011405.1","ENSG00000249526","ENSG00000249593",1.0,1.0,1.0,1.0,0.957,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:127989291:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",9.0,1.0,1.0,1.0,0.784,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","9:NFX1:33290597:+:9:DNAJA1:33029885:+:rev","NFX1--DNAJA1","ENSG00000086102","ENSG00000086061",16.0,1.0,1.0,1.0,0.848927466320856,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","X:CLCN4:10187614:+:X:SHROOM2:9873652:+:rev","CLCN4--SHROOM2","ENSG00000073464","ENSG00000146950",3.0,1.0,1.0,1.0,0.536,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","10:ACTR1A:102502600:-:17:EFCAB13:47370437:+:fusion","ACTR1A--EFCAB13","ENSG00000138107","ENSG00000178852",1.0,1.0,1.0,1.0,0.62,0.00689655172414]
["TCGA_UCS","TCGA-N9-A4PZ-01A","10:HTR7:90857133:-:16:VAC14:70763025:-:fusion","HTR7--VAC14","ENSG00000148680","ENSG00000103043",16.0,1.0,1.0,1.0,0.843315066971751,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","15:IVD:40413087:+:1:ECE1:21260392:-:fusion","IVD--ECE1","ENSG00000128928","ENSG00000117298",14.0,1.0,1.0,1.0,0.716,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","17:YWHAE:1400047:-:17:GCGR:81808842:+:strandcross","YWHAE--GCGR","ENSG00000108953","ENSG00000215644",40.0,1.0,1.0,1.0,0.763783353620765,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","17:YWHAE:1400047:-:17:GCGR:81810825:+:strandcross","YWHAE--GCGR","ENSG00000108953","ENSG00000215644",3.0,1.0,1.0,1.0,0.466,0.0137931034483]
["TCGA_UCS","TCGA-N9-A4PZ-01A","19:PPP1R12C:55098784:-:19:CLEC11A:50723905:+:strandcross","PPP1R12C--CLEC11A","ENSG00000125503","ENSG00000105472",30.0,1.0,1.0,1.0,0.866157645113195,0.0]
["TCGA_UCS","TCGA-N9-A4PZ-01A","1:EIF4G3:21050866:-:1:LAMC1:183116577:+:strandcross","EIF4G3--LAMC1","ENSG00000075151","ENSG00000135862",17.0,1.0,1.0,1.0,0.83809034705136,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","1:EPHA2:16148378:-:20:LSM14B:62124617:+:fusion","EPHA2--LSM14B","ENSG00000142627","ENSG00000149657",16.0,1.0,1.0,1.0,0.736884650034163,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","1:NUCKS1:205727700:-:1:SDCCAG8:243415702:+:strandcross","NUCKS1--SDCCAG8","ENSG00000069275","ENSG00000054282",3.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_UCS","TCGA-N9-A4PZ-01A","1:TBCE:235367504:+:1:C1orf186:206099655:+:rev","TBCE--C1orf186","ENSG00000116957","ENSG00000263961",2.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_UCS","TCGA-N9-A4PZ-01A","20:SERINC3:44513879:-:11:AP000721.2:64103194:+:fusion","SERINC3--AP000721.2","ENSG00000132824","ENSG00000256824",8.0,1.0,1.0,1.0,0.973,0.0]
["TCGA_UCS","TCGA-N9-A4PZ-01A","22:TRIOBP:37765817:+:22:PES1:30592398:-:strandcross","TRIOBP--PES1","ENSG00000100106","ENSG00000100029",5.0,1.0,1.0,1.0,0.336,0.0206896551724]
["TCGA_UCS","TCGA-N9-A4PZ-01A","3:SETD2:47163854:-:1:PALMD:99694019:+:fusion","SETD2--PALMD","ENSG00000181555","ENSG00000099260",81.0,1.0,1.0,1.0,0.973460240408189,0.0]
["TCGA_UCS","TCGA-N9-A4PZ-01A","7:GTF2IRD1:74545809:+:7:POLD2:44122109:-:strandcross","GTF2IRD1--POLD2","ENSG00000006704","ENSG00000106628",2.0,1.0,1.0,1.0,0.789,0.00344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","9:MIGA2:129063631:+:17:P4HB:81847347:-:fusion","MIGA2--P4HB","ENSG00000148343","ENSG00000185624",26.0,1.0,1.0,1.0,0.168248638968884,0.0344827586207]
["TCGA_UCS","TCGA-N9-A4PZ-01A","15:ARIH1:72475014:+:15:AC009690.2:72345386:+:rev","ARIH1--AC009690.2","ENSG00000166233","ENSG00000261460",3.0,1.0,1.0,1.0,0.653,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","19:SBNO2:1174172:-:19:CBARP:1234742:-:rev","SBNO2--CBARP","ENSG00000064932","ENSG00000099625",2.0,1.0,1.0,1.0,0.663,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","20:ASXL1:32369123:+:20:CCM2L:32025856:+:rev","ASXL1--CCM2L","ENSG00000171456","ENSG00000101331",2.0,1.0,1.0,1.0,0.587,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","22:RBFOX2:36028240:-:22:TST:37011325:-:rev","RBFOX2--TST","ENSG00000100320","ENSG00000128311",7.0,1.0,1.0,1.0,0.963,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","2:NCOA1:24697798:+:2:FAM228B:24095141:+:rev","NCOA1--FAM228B","ENSG00000084676","ENSG00000219626",3.0,1.0,1.0,1.0,0.685,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","8:ATP6V1H:53832984:-:8:LYPLA1:54100939:-:rev","ATP6V1H--LYPLA1","ENSG00000047249","ENSG00000120992",1.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","9:B4GALT1:33120419:-:9:BAG1:33262830:-:rev","B4GALT1--BAG1","ENSG00000086062","ENSG00000107262",2.0,1.0,1.0,1.0,0.825,"NA"]
["TCGA_UCS","TCGA-N9-A4Q1-01A","10:VTI1A:112538330:+:1:HDAC1:32324479:+:fusion","VTI1A--HDAC1","ENSG00000151532","ENSG00000116478",9.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_UCS","TCGA-N9-A4Q1-01A","11:MYO7A:77202424:+:2:ZNF512:27621153:+:fusion","MYO7A--ZNF512","ENSG00000137474","ENSG00000243943",2.0,1.0,1.0,1.0,0.824,0.00617283950617]
["TCGA_UCS","TCGA-N9-A4Q1-01A","3:LMCD1-AS1:8603244:-:6:TRAF3IP2-AS1:111597838:+:fusion","LMCD1-AS1--TRAF3IP2-AS1","ENSG00000227110","ENSG00000231889",6.0,1.0,1.0,1.0,0.595,0.0123456790123]
["TCGA_UCS","TCGA-N9-A4Q1-01A","4:CHIC2:54048955:-:2:TSGA10:98998221:-:fusion","CHIC2--TSGA10","ENSG00000109220","ENSG00000135951",17.0,1.0,1.0,1.0,0.778122982079066,0.00925925925926]
["TCGA_UCS","TCGA-N9-A4Q1-01A","11:CHEK1:125635533:+:11:STT3A:125606301:+:rev","CHEK1--STT3A","ENSG00000149554","ENSG00000134910",2.0,1.0,1.0,1.0,0.901,"NA"]
["TCGA_UCS","TCGA-N9-A4Q1-01A","2:BABAM2:27894684:+:2:GPN1:27647836:+:rev","BABAM2--GPN1","ENSG00000243147","ENSG00000198522",6.0,1.0,1.0,1.0,0.932,"NA"]
["TCGA_UCS","TCGA-N9-A4Q1-01A","2:MGAT4A:98663046:-:2:MITD1:99174016:-:rev","MGAT4A--MITD1","ENSG00000071073","ENSG00000158411",2.0,1.0,1.0,1.0,0.743,"NA"]
["TCGA_UCS","TCGA-N9-A4Q3-01A","19:LSM4:18323018:-:1:RCC1:28529858:+:fusion","LSM4--RCC1","ENSG00000130520","ENSG00000180198",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_UCS","TCGA-N9-A4Q3-01A","19:OLFM2:9936304:-:19:CRTC1:18742910:+:strandcross","OLFM2--CRTC1","ENSG00000105088","ENSG00000105662",8.0,1.0,1.0,1.0,0.767,0.00512820512821]
["TCGA_UCS","TCGA-N9-A4Q3-01A","4:APBB2:41214405:-:13:LINC00540:22274523:+:fusion","APBB2--LINC00540","ENSG00000163697","ENSG00000276476",5.0,1.0,1.0,1.0,0.627,0.00769230769231]
["TCGA_UCS","TCGA-N9-A4Q3-01A","1:RAP1GAP:21649761:-:1:USP48:21690099:-:rev","RAP1GAP--USP48","ENSG00000076864","ENSG00000090686",2.0,1.0,1.0,1.0,0.888,"NA"]
["TCGA_UCS","TCGA-N9-A4Q4-01A","11:DDX6:118786052:-:2:ALK:29383859:-:fusion","DDX6--ALK","ENSG00000110367","ENSG00000171094",2.0,1.0,1.0,1.0,0.456,0.00664451827243]
["TCGA_UCS","TCGA-N9-A4Q4-01A","15:MCTP2:94402019:+:12:RIMKLB:8782912:+:fusion","MCTP2--RIMKLB","ENSG00000140563","ENSG00000166532",3.0,1.0,1.0,1.0,0.871,0.0]
["TCGA_UCS","TCGA-N9-A4Q4-01A","22:ARFGAP3:42847514:-:1:LSM10:36394153:-:fusion","ARFGAP3--LSM10","ENSG00000242247","ENSG00000181817",7.0,1.0,1.0,1.0,0.237,0.00996677740864]
["TCGA_UCS","TCGA-N9-A4Q4-01A","22:USP18:18170920:+:22:TUBA8:18145656:+:rev","USP18--TUBA8","ENSG00000184979","ENSG00000183785",1.0,1.0,1.0,1.0,0.812,"NA"]
["TCGA_UCS","TCGA-N9-A4Q7-01A","11:RPS3:75400777:+:20:RPS21:62387321:+:fusion","RPS3--RPS21","ENSG00000149273","ENSG00000171858",2.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_UCS","TCGA-N9-A4Q7-01A","19:TYK2:10356568:-:19:SYMPK:45844200:-:rev","TYK2--SYMPK","ENSG00000105397","ENSG00000125755",5.0,1.0,1.0,1.0,0.956,0.00194174757282]
["TCGA_UCS","TCGA-N9-A4Q7-01A","8:PVT1:127890998:+:7:CD36:80546191:+:fusion","PVT1--CD36","ENSG00000249859","ENSG00000135218",28.0,1.0,1.0,1.0,0.969017670388865,0.0]
["TCGA_UCS","TCGA-N9-A4Q7-01A","12:PPTC7:110545880:-:12:HVCN1:110628176:-:rev","PPTC7--HVCN1","ENSG00000196850","ENSG00000122986",4.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_UCS","TCGA-N9-A4Q7-01A","1:DPM3:155140491:-:1:MUC1:155186209:-:rev","DPM3--MUC1","ENSG00000179085","ENSG00000185499",3.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_UCS","TCGA-N9-A4Q8-01A","2:SERTAD2:64750281:-:2:BCL2L11:111164133:+:strandcross","SERTAD2--BCL2L11","ENSG00000179833","ENSG00000153094",3.0,1.0,1.0,1.0,0.728,0.00727272727273]
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["TCGA_UCS","TCGA-N9-A4Q8-01A","12:KRAS:25250764:-:12:AC019209.3:25783260:-:rev","KRAS--AC019209.3","ENSG00000133703","ENSG00000256686",2.0,1.0,1.0,1.0,0.827,"NA"]
["TCGA_UCS","TCGA-N9-A4Q8-01A","17:SEPT9:77281554:+:17:MFSD11:76738282:+:rev","SEPT9--MFSD11","ENSG00000184640","ENSG00000267168",2.0,1.0,1.0,1.0,0.672,"NA"]
["TCGA_UCS","TCGA-N9-A4Q8-01A","17:ZFP3:5078575:+:17:ARRB2:4717217:+:rev","ZFP3--ARRB2","ENSG00000180787","ENSG00000141480",24.0,1.0,1.0,1.0,0.448763815312407,"NA"]
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["TCGA_UCS","TCGA-N9-A4Q8-01A","22:RBFOX2:35809780:-:22:MYH9:36289297:-:rev","RBFOX2--MYH9","ENSG00000100320","ENSG00000100345",19.0,1.0,1.0,1.0,0.864012692508794,"NA"]
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["TCGA_UCS","TCGA-NA-A4QV-01A","10:ZMIZ1:79069270:+:10:ADK:74708321:+:rev","ZMIZ1--ADK","ENSG00000108175","ENSG00000156110",43.0,1.0,1.0,1.0,0.930867965207714,0.0]
["TCGA_UCS","TCGA-NA-A4QV-01A","13:FBXL3:77015409:-:6:ZNF76:35291278:+:fusion","FBXL3--ZNF76","ENSG00000005812","ENSG00000065029",21.0,1.0,1.0,1.0,0.627194383740703,0.0114613180516]
["TCGA_UCS","TCGA-NA-A4QV-01A","16:HERPUD1:56936817:+:2:THADA:43398139:-:fusion","HERPUD1--THADA","ENSG00000051108","ENSG00000115970",1.0,1.0,1.0,1.0,0.843,0.00573065902579]
["TCGA_UCS","TCGA-NA-A4QV-01A","16:HERPUD1:56936817:+:2:THADA:43430302:-:fusion","HERPUD1--THADA","ENSG00000051108","ENSG00000115970",28.0,1.0,1.0,1.0,0.883318521887791,0.00286532951289]
["TCGA_UCS","TCGA-NA-A4QV-01A","16:NUP93:56758655:+:2:THADA:43232882:-:fusion","NUP93--THADA","ENSG00000102900","ENSG00000115970",40.0,1.0,1.0,1.0,0.961488475263666,0.0]
["TCGA_UCS","TCGA-NA-A4QV-01A","16:NUP93:56782214:+:2:THADA:43232882:-:fusion","NUP93--THADA","ENSG00000102900","ENSG00000115970",9.0,2.0,1.0,1.0,0.369,0.0171919770774]
["TCGA_UCS","TCGA-NA-A4QV-01A","19:DYRK1B:39834023:-:19:DPF1:38222708:-:reg","DYRK1B--DPF1","ENSG00000105204","ENSG00000011332",13.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_UCS","TCGA-NA-A4QV-01A","19:ZNF529:36589615:-:19:RYR1:38561113:+:strandcross","ZNF529--RYR1","ENSG00000186020","ENSG00000196218",5.0,1.0,1.0,1.0,0.385,0.0143266475645]
["TCGA_UCS","TCGA-NA-A4QV-01A","22:CCDC157:30357132:+:22:EWSR1:29291562:+:rev","CCDC157--EWSR1","ENSG00000187860","ENSG00000182944",2.0,1.0,1.0,1.0,0.398,0.0143266475645]
["TCGA_UCS","TCGA-NA-A4QV-01A","22:CCDC157:30357132:+:22:EWSR1:29291565:+:rev","CCDC157--EWSR1","ENSG00000187860","ENSG00000182944",10.0,1.0,1.0,1.0,0.461,0.0143266475645]
["TCGA_UCS","TCGA-NA-A4QV-01A","2:MEMO1:32010187:-:2:KLHL29:23684399:+:strandcross","MEMO1--KLHL29","ENSG00000162959","ENSG00000119771",4.0,1.0,1.0,1.0,0.921,0.0]
["TCGA_UCS","TCGA-NA-A4QV-01A","2:PPP4R3B:55558775:-:11:SBF2-AS1:9807848:+:fusion","PPP4R3B--SBF2-AS1","ENSG00000275052","ENSG00000246273",3.0,1.0,1.0,1.0,0.536,0.0143266475645]
["TCGA_UCS","TCGA-NA-A4QV-01A","4:MAPK10:86354530:-:4:PTPN13:86758260:+:strandcross","MAPK10--PTPN13","ENSG00000122417","ENSG00000163629",2.0,1.0,1.0,1.0,0.606,0.0143266475645]
["TCGA_UCS","TCGA-NA-A4QV-01A","4:PTPN13:86594789:+:4:MAPK10:86194407:-:strandcross","PTPN13--MAPK10","ENSG00000163629","ENSG00000109339",2.0,1.0,1.0,1.0,0.62,0.0114613180516]
["TCGA_UCS","TCGA-NA-A4QV-01A","6:KIF13A:17764155:-:6:DNAH8:38761702:+:strandcross","KIF13A--DNAH8","ENSG00000137177","ENSG00000124721",3.0,1.0,1.0,1.0,0.871,0.00286532951289]
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["TCGA_UCS","TCGA-NA-A4QW-01A","3:ATXN7:63952483:+:3:SLC25A26:66243203:+:reg","ATXN7--SLC25A26","ENSG00000163635","ENSG00000144741",30.0,2.0,1.0,1.0,0.793874401491231,0.0]
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["TCGA_UCS","TCGA-NA-A4QW-01A","8:RPL30:98044943:-:8:STK3:98526917:-:rev","RPL30--STK3","ENSG00000156482","ENSG00000104375",2.0,1.0,1.0,1.0,0.627,"NA"]
["TCGA_UCS","TCGA-NA-A4QX-01A","3:PHC3:170171373:-:6:NFKBIL1:31548163:+:fusion","PHC3--NFKBIL1","ENSG00000173889","ENSG00000204498",19.0,1.0,1.0,1.0,0.805956193902378,0.00582524271845]
["TCGA_UCS","TCGA-NA-A4QX-01A","1:MTOR:11167442:-:1:MAD2L2:11680613:-:rev","MTOR--MAD2L2","ENSG00000198793","ENSG00000116670",22.0,1.0,1.0,1.0,0.692052098925604,"NA"]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:MPPED1:43474961:+:4:SCFD2:52874061:-:fusion","MPPED1--SCFD2","ENSG00000186732","ENSG00000184178",40.0,1.0,1.0,1.0,0.715940865163725,0.00591715976331]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:RNF185:31160303:+:4:NKX1-1:1403815:-:fusion","RNF185--NKX1-1","ENSG00000138942","ENSG00000235608",5.0,1.0,1.0,1.0,0.97,0.00295857988166]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:RRP7A:42515151:-:4:AC104078.1:36272947:+:fusion","RRP7A--AC104078.1","ENSG00000189306","ENSG00000247193",11.0,1.0,1.0,1.0,0.485,0.00591715976331]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:RRP7A:42516011:-:4:AC104078.1:36272947:+:fusion","RRP7A--AC104078.1","ENSG00000189306","ENSG00000247193",4.0,1.0,1.0,1.0,0.939,0.00295857988166]
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["TCGA_UCS","TCGA-NA-A4QY-01A","22:RRP7A:42519714:-:4:AC104078.1:36272947:+:fusion","RRP7A--AC104078.1","ENSG00000189306","ENSG00000247193",7.0,1.0,1.0,1.0,0.961,0.00295857988166]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:TAB1:39428183:+:22:C22orf42:32154318:-:strandcross","TAB1--C22orf42","ENSG00000100324","ENSG00000205856",3.0,1.0,1.0,1.0,0.804,0.00591715976331]
["TCGA_UCS","TCGA-NA-A4QY-01A","4:AC024230.1:19533618:+:4:HTRA3:8282437:+:rev","AC024230.1--HTRA3","ENSG00000248515","ENSG00000170801",3.0,1.0,1.0,1.0,0.434,0.0118343195266]
["TCGA_UCS","TCGA-NA-A4R0-01A","10:PRPF18:13587152:+:10:LINC00708:8259670:-:strandcross","PRPF18--LINC00708","ENSG00000165630","ENSG00000232170",2.0,1.0,1.0,1.0,0.857,0.00216919739696]
["TCGA_UCS","TCGA-NA-A4R0-01A","10:PRPF18:13587152:+:10:LINC00708:8260950:-:strandcross","PRPF18--LINC00708","ENSG00000165630","ENSG00000232170",8.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_UCS","TCGA-NA-A4R0-01A","10:PRPF18:13587152:+:10:LINC00708:8266699:-:strandcross","PRPF18--LINC00708","ENSG00000165630","ENSG00000232170",5.0,1.0,1.0,1.0,0.743,0.00650759219089]
["TCGA_UCS","TCGA-NA-A4R0-01A","1:DVL1:1348896:-:10:OPTN:13112453:+:fusion","DVL1--OPTN","ENSG00000107404","ENSG00000123240",13.0,1.0,1.0,1.0,0.699,0.00650759219089]
["TCGA_UCS","TCGA-NA-A4R0-01A","20:SEC23B:18543172:+:20:DZANK1:18433765:-:strandcross","SEC23B--DZANK1","ENSG00000101310","ENSG00000089091",3.0,1.0,1.0,1.0,0.606,0.0108459869848]
["TCGA_UCS","TCGA-NA-A4R0-01A","9:ZNF618:113876413:+:1:AL049569.1:17004643:+:fusion","ZNF618--AL049569.1","ENSG00000157657","ENSG00000226526",7.0,1.0,1.0,1.0,0.967,0.00216919739696]
["TCGA_UCS","TCGA-NA-A4R0-01A","7:C7orf50:1127257:-:7:MAD1L1:1816228:-:rev","C7orf50--MAD1L1","ENSG00000146540","ENSG00000002822",22.0,8.0,4.0,3.0,0.521363976403224,"NA"]
["TCGA_UCS","TCGA-NA-A4R0-01A","8:PSD3:18936034:-:8:AC100849.1:19246825:-:rev","PSD3--AC100849.1","ENSG00000156011","ENSG00000253557",2.0,1.0,1.0,1.0,0.843,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","17:TMC6:78117269:-:17:AC004707.1:50397240:+:strandcross","TMC6--AC004707.1","ENSG00000141524","ENSG00000253102",3.0,1.0,1.0,1.0,0.902,0.00215053763441]
["TCGA_UCS","TCGA-NA-A4R1-01A","19:BTBD2:1987166:-:22:GTSE1:46323190:+:fusion","BTBD2--GTSE1","ENSG00000133243","ENSG00000075218",36.0,1.0,1.0,1.0,0.940535957560383,0.0]
["TCGA_UCS","TCGA-NA-A4R1-01A","1:KIF1B:10368538:+:16:HAGH:1823037:-:fusion","KIF1B--HAGH","ENSG00000054523","ENSG00000063854",2.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_UCS","TCGA-NA-A4R1-01A","20:ZNF341:33741012:+:20:AL034549.1:33990013:-:strandcross","ZNF341--AL034549.1","ENSG00000131061","ENSG00000275784",6.0,1.0,1.0,1.0,0.884,0.00215053763441]
["TCGA_UCS","TCGA-NA-A4R1-01A","20:ZNF341:33741012:+:20:RALY-AS1:33983596:-:strandcross","ZNF341--RALY-AS1","ENSG00000131061","ENSG00000228265",6.0,1.0,1.0,1.0,0.679,0.00860215053763]
["TCGA_UCS","TCGA-NA-A4R1-01A","22:TBC1D22A:47037198:+:19:AP3D1:2102268:-:fusion","TBC1D22A--AP3D1","ENSG00000054611","ENSG00000065000",6.0,1.0,1.0,1.0,0.446,0.010752688172]
["TCGA_UCS","TCGA-NA-A4R1-01A","7:PUS7:105505955:-:7:AC005050.1:106573160:-:rev","PUS7--AC005050.1","ENSG00000091127","ENSG00000267052",12.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_UCS","TCGA-NA-A4R1-01A","9:SPTAN1:128552696:+:19:SGTA:2757782:-:fusion","SPTAN1--SGTA","ENSG00000197694","ENSG00000104969",6.0,1.0,1.0,1.0,0.956,0.0]
["TCGA_UCS","TCGA-NA-A4R1-01A","9:SPTAN1:128552696:+:19:SGTA:2761522:-:fusion","SPTAN1--SGTA","ENSG00000197694","ENSG00000104969",32.0,1.0,1.0,1.0,0.866610717644,0.00215053763441]
["TCGA_UCS","TCGA-NA-A4R1-01A","11:NXF1:62796287:-:11:STX5:62807628:-:rev","NXF1--STX5","ENSG00000162231","ENSG00000162236",7.0,1.0,1.0,1.0,0.606,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","11:PHF21A:46120935:-:11:ARHGAP1:46696156:-:rev","PHF21A--ARHGAP1","ENSG00000135365","ENSG00000175220",6.0,2.0,1.0,1.0,0.977,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","15:CRTC3:90638815:+:15:MESP2:89778065:+:rev","CRTC3--MESP2","ENSG00000140577","ENSG00000188095",4.0,1.0,1.0,1.0,0.857,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","15:NUSAP1:41333050:+:15:AC020661.3:41013027:+:rev","NUSAP1--AC020661.3","ENSG00000137804","ENSG00000259463",5.0,1.0,1.0,1.0,0.864,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","17:SUMO2:75182814:-:17:ACOX1:75978693:-:rev","SUMO2--ACOX1","ENSG00000188612","ENSG00000161533",2.0,1.0,1.0,1.0,0.447,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","1:EIF4G3:21050866:-:1:ECE1:21272911:-:rev","EIF4G3--ECE1","ENSG00000075151","ENSG00000117298",3.0,1.0,1.0,1.0,0.875,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","1:EIF4G3:21050866:-:1:ECE1:21290156:-:rev","EIF4G3--ECE1","ENSG00000075151","ENSG00000117298",22.0,2.0,1.0,1.0,0.894990204716698,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","1:WASF2:27489986:-:1:FGR:27625151:-:rev","WASF2--FGR","ENSG00000158195","ENSG00000000938",17.0,6.0,4.0,4.0,0.50058795674687,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","22:PMM1:41583959:-:22:SHISA8:41910147:-:rev","PMM1--SHISA8","ENSG00000100417","ENSG00000234965",15.0,1.0,1.0,1.0,0.583,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","3:MAP4:47977865:-:3:SPINK8:48309946:-:rev","MAP4--SPINK8","ENSG00000047849","ENSG00000229453",2.0,2.0,2.0,2.0,0.747,"NA"]
["TCGA_UCS","TCGA-NA-A4R1-01A","7:KMT2E:105090273:+:7:LHFPL3:104736675:+:rev","KMT2E--LHFPL3","ENSG00000005483","ENSG00000187416",39.0,1.0,1.0,1.0,0.790431370150611,"NA"]
["TCGA_UCS","TCGA-NA-A5I1-01A","11:CD81:2376357:+:10:ARMC3:23032861:+:fusion","CD81--ARMC3","ENSG00000110651","ENSG00000165309",4.0,1.0,1.0,1.0,0.299,0.01108033241]
["TCGA_UCS","TCGA-NA-A5I1-01A","11:CD81:2376357:+:10:ARMC3:23037270:+:fusion","CD81--ARMC3","ENSG00000110651","ENSG00000165309",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_UCS","TCGA-NA-A5I1-01A","11:CD81:2377615:+:10:ARMC3:23032861:+:fusion","CD81--ARMC3","ENSG00000110651","ENSG00000165309",37.0,1.0,1.0,1.0,0.89898859016971,0.00277008310249]
["TCGA_UCS","TCGA-NA-A5I1-01A","11:CD81:2377615:+:10:ARMC3:23037270:+:fusion","CD81--ARMC3","ENSG00000110651","ENSG00000165309",13.0,1.0,1.0,1.0,0.53,0.00831024930748]
["TCGA_UCS","TCGA-NA-A5I1-01A","14:SOS2:50231197:-:4:POLN:2174751:-:fusion","SOS2--POLN","ENSG00000100485","ENSG00000130997",4.0,1.0,1.0,1.0,0.25,0.0193905817175]
["TCGA_UCS","TCGA-NA-A5I1-01A","14:SOS2:50231197:-:4:POLN:2176334:-:fusion","SOS2--POLN","ENSG00000100485","ENSG00000130997",4.0,1.0,1.0,1.0,0.444,0.00831024930748]
["TCGA_UCS","TCGA-NA-A5I1-01A","16:SLC7A6:68266721:+:16:C16orf70:67131286:+:rev","SLC7A6--C16orf70","ENSG00000103064","ENSG00000125149",4.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_UCS","TCGA-NA-A5I1-01A","17:RNF213:80334270:+:4:UVSSA:1351715:+:fusion","RNF213--UVSSA","ENSG00000173821","ENSG00000163945",4.0,1.0,1.0,1.0,0.196,0.0249307479224]
["TCGA_UCS","TCGA-NA-A5I1-01A","17:TBC1D16:79942060:-:17:AATK-AS1:81178918:+:strandcross","TBC1D16--AATK-AS1","ENSG00000167291","ENSG00000225180",9.0,1.0,1.0,1.0,0.711,0.00554016620499]
["TCGA_UCS","TCGA-NA-A5I1-01A","1:TBCE:235414618:+:1:SLC35F3:234231417:+:rev","TBCE--SLC35F3","ENSG00000116957","ENSG00000183780",2.0,1.0,1.0,1.0,0.278,0.0193905817175]
["TCGA_UCS","TCGA-NA-A5I1-01A","20:DNMT3B:32781414:+:20:COMMD7:32728142:-:strandcross","DNMT3B--COMMD7","ENSG00000088305","ENSG00000149600",14.0,1.0,1.0,1.0,0.505,0.00796812749004]
["TCGA_UCS","TCGA-NA-A5I1-01A","3:PDCD10:167734806:-:8:HSF1:144313846:+:fusion","PDCD10--HSF1","ENSG00000114209","ENSG00000185122",4.0,1.0,1.0,1.0,0.21,0.0249307479224]
["TCGA_UCS","TCGA-NA-A5I1-01A","12:LRP1:57129031:+:12:SLC39A5:56231204:+:rev","LRP1--SLC39A5","ENSG00000123384","ENSG00000139540",6.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_UCS","TCGA-NA-A5I1-01A","12:LRP1:57129031:+:12:SLC39A5:56236396:+:rev","LRP1--SLC39A5","ENSG00000123384","ENSG00000139540",2.0,1.0,1.0,1.0,0.888,"NA"]
["TCGA_UCS","TCGA-NA-A5I1-01A","19:RPL18:48619141:-:19:HSD17B14:48815141:-:rev","RPL18--HSD17B14","ENSG00000063177","ENSG00000087076",1.0,1.0,1.0,1.0,0.917,"NA"]
["TCGA_UCS","TCGA-NA-A5I1-01A","2:USP37:218562673:-:2:NHEJ1:219078206:-:rev","USP37--NHEJ1","ENSG00000135913","ENSG00000187736",4.0,1.0,1.0,1.0,0.889,"NA"]
["TCGA_UCS","TCGA-ND-A4W6-01A","21:C2CD2:41942147:-:X:SH3BGRL:81276984:+:fusion","C2CD2--SH3BGRL","ENSG00000157617","ENSG00000131171",9.0,1.0,1.0,1.0,0.301,0.0114942528736]
["TCGA_UCS","TCGA-ND-A4W6-01A","5:PARP8:50763242:+:5:FAM159B:64695507:+:reg","PARP8--FAM159B","ENSG00000151883","ENSG00000145642",2.0,1.0,1.0,1.0,0.421,0.00689655172414]
["TCGA_UCS","TCGA-ND-A4W6-01A","X:AC234772.2:45849375:-:22:AC002472.1:21042703:+:fusion","AC234772.2--AC002472.1","ENSG00000231566","ENSG00000226872",4.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_UCS","TCGA-ND-A4W6-01A","X:ELK1:47650423:-:21:PCBP3:45849961:+:fusion","ELK1--PCBP3","ENSG00000126767","ENSG00000183570",3.0,1.0,1.0,1.0,0.269,0.0137931034483]
["TCGA_UCS","TCGA-ND-A4W6-01A","12:RNF41:56221760:-:12:GLS2:56472195:-:rev","RNF41--GLS2","ENSG00000181852","ENSG00000135423",2.0,1.0,1.0,1.0,0.99,"NA"]
["TCGA_UCS","TCGA-ND-A4W6-01A","19:BORCS8:19180686:-:19:SUGP1:19280291:-:rev","BORCS8--SUGP1","ENSG00000064489","ENSG00000105705",2.0,2.0,1.0,1.0,0.98,"NA"]
["TCGA_UCS","TCGA-ND-A4WA-01A","8:NRG1:31640729:+:20:PMEPA1:57659697:-:fusion","NRG1--PMEPA1","ENSG00000157168","ENSG00000124225",8.0,1.0,1.0,1.0,0.732,0.00190476190476]
["TCGA_UCS","TCGA-ND-A4WF-01A","12:AC069208.1:24368563:-:12:SLC15A5:16239867:-:reg","AC069208.1--SLC15A5","ENSG00000255864","ENSG00000188991",5.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_UCS","TCGA-ND-A4WF-01A","12:FOXM1:2864320:-:12:ANO2:5532114:-:rev","FOXM1--ANO2","ENSG00000111206","ENSG00000047617",1.0,1.0,1.0,1.0,0.793,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","12:RASSF8:25959148:+:12:ST8SIA1:22202038:-:strandcross","RASSF8--ST8SIA1","ENSG00000123094","ENSG00000111728",3.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_UCS","TCGA-ND-A4WF-01A","17:SPOP:49675895:-:8:EPHX2:27500926:+:fusion","SPOP--EPHX2","ENSG00000121067","ENSG00000120915",2.0,1.0,1.0,1.0,0.338,0.00678733031674]
["TCGA_UCS","TCGA-ND-A4WF-01A","17:SPOP:49677933:-:8:EPHX2:27500926:+:fusion","SPOP--EPHX2","ENSG00000121067","ENSG00000120915",10.0,1.0,1.0,1.0,0.952,0.0]
["TCGA_UCS","TCGA-ND-A4WF-01A","1:TRABD2B:47994034:-:11:PSMD13:244041:+:fusion","TRABD2B--PSMD13","ENSG00000269113","ENSG00000185627",12.0,1.0,1.0,1.0,0.703,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","20:EYA2:47097168:+:20:MYLK2:31830819:+:rev","EYA2--MYLK2","ENSG00000064655","ENSG00000101306",28.0,1.0,1.0,1.0,0.81098830974602,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:CTNNB1:41199670:+:3:IGF2BP2:185698347:-:strandcross","CTNNB1--IGF2BP2","ENSG00000168036","ENSG00000073792",7.0,1.0,1.0,1.0,0.914,0.0]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:IGF2BP2:185823153:-:11:IFITM1:313997:+:fusion","IGF2BP2--IFITM1","ENSG00000073792","ENSG00000185885",1.0,1.0,1.0,1.0,0.658,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:IGF2BP2:185823153:-:11:IFITM2:308231:+:fusion","IGF2BP2--IFITM2","ENSG00000073792","ENSG00000185201",119.0,1.0,1.0,1.0,0.572993897499095,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:IGF2BP2:185824783:-:11:IFITM2:308231:+:fusion","IGF2BP2--IFITM2","ENSG00000073792","ENSG00000185201",6.0,1.0,1.0,1.0,0.409,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:TRA2B:185931577:-:3:P3H2:189964098:-:rev","TRA2B--P3H2","ENSG00000136527","ENSG00000090530",9.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_UCS","TCGA-ND-A4WF-01A","3:TRA2B:185937825:-:3:P3H2:189964098:-:rev","TRA2B--P3H2","ENSG00000136527","ENSG00000090530",17.0,1.0,1.0,1.0,0.70219729524916,0.00226244343891]
["TCGA_UCS","TCGA-ND-A4WF-01A","6:MED20:41916785:-:6:AL033519.3:35544868:+:strandcross","MED20--AL033519.3","ENSG00000124641","ENSG00000228559",3.0,1.0,1.0,1.0,0.255,0.0135746606335]
["TCGA_UCS","TCGA-ND-A4WF-01A","17:ACTG1:81511903:-:17:NPLOC4:81600427:-:rev","ACTG1--NPLOC4","ENSG00000184009","ENSG00000182446",10.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_UCS","TCGA-NF-A4WU-01A","1:ENAH:225554906:-:12:AC007406.4:204018:+:fusion","ENAH--AC007406.4","ENSG00000154380","ENSG00000256577",117.0,1.0,1.0,1.0,0.924233742112172,0.0]
["TCGA_UCS","TCGA-NF-A4WX-01A","19:SLC27A1:17489117:+:14:KIAA0391:35266727:+:fusion","SLC27A1--KIAA0391","ENSG00000130304","ENSG00000100890",9.0,1.0,1.0,1.0,0.186,0.0326086956522]
["TCGA_UCS","TCGA-NF-A4WX-01A","1:SF3A3:37960120:-:1:HPCAL4:39684611:-:rev","SF3A3--HPCAL4","ENSG00000183431","ENSG00000116983",14.0,1.0,1.0,1.0,0.792,0.0036231884058]
["TCGA_UCS","TCGA-NF-A4WX-01A","2:TMEM131:97792386:-:22:PLA2G6:38135084:-:fusion","TMEM131--PLA2G6","ENSG00000075568","ENSG00000184381",14.0,1.0,1.0,1.0,0.556,0.018115942029]
["TCGA_UCS","TCGA-NF-A4WX-01A","5:NIPBL:36877178:+:5:SPEF2:35799968:+:rev","NIPBL--SPEF2","ENSG00000164190","ENSG00000152582",77.0,1.0,1.0,1.0,0.956110630612492,0.0]
["TCGA_UCS","TCGA-NF-A4WX-01A","5:NIPBL:36877178:+:5:SPEF2:35806707:+:rev","NIPBL--SPEF2","ENSG00000164190","ENSG00000152582",17.0,1.0,1.0,1.0,0.722230361661867,0.0036231884058]
["TCGA_UCS","TCGA-NF-A4WX-01A","11:GPR137:64288721:+:11:RARRES3:63546149:+:rev","GPR137--RARRES3","ENSG00000173264","ENSG00000133321",2.0,1.0,1.0,1.0,0.602,"NA"]
["TCGA_UCS","TCGA-NF-A4WX-01A","11:KCNQ1:2445484:+:11:LSP1:1880087:+:rev","KCNQ1--LSP1","ENSG00000053918","ENSG00000130592",7.0,2.0,2.0,2.0,0.602,"NA"]
["TCGA_UCS","TCGA-NF-A4WX-01A","20:EIF2S2:34096657:-:20:PIGU:34588607:-:rev","EIF2S2--PIGU","ENSG00000125977","ENSG00000101464",5.0,1.0,1.0,1.0,0.746,"NA"]
["TCGA_UCS","TCGA-NF-A4WX-01A","22:CHEK2:28689135:-:22:THOC5:29536738:-:rev","CHEK2--THOC5","ENSG00000183765","ENSG00000100296",3.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_UCS","TCGA-NF-A5CP-01A","16:ZNF423:49789487:-:3:NCEH1:172634092:-:fusion","ZNF423--NCEH1","ENSG00000102935","ENSG00000144959",9.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_UCS","TCGA-NF-A5CP-01A","17:UBE2G1:4366271:-:22:MIR130B:21669913:+:fusion","UBE2G1--MIR130B","ENSG00000132388","ENSG00000207751",12.0,1.0,1.0,1.0,0.815,0.0]
["TCGA_UCS","TCGA-NF-A5CP-01A","17:UBE2G1:4366271:-:22:PPIL2:21669913:+:fusion","UBE2G1--PPIL2","ENSG00000132388","ENSG00000207751",12.0,1.0,1.0,1.0,0.815,0.0]
["TCGA_UCS","TCGA-NF-A5CP-01A","17:UBE2G1:4366271:-:22:PPIL2:21670566:+:fusion","UBE2G1--PPIL2","ENSG00000132388","ENSG00000100023",3.0,1.0,1.0,1.0,0.649,0.00316957210777]
["TCGA_UCS","TCGA-NF-A5CP-01A","17:UBE2G1:4366271:-:22:PPIL2:21681299:+:fusion","UBE2G1--PPIL2","ENSG00000132388","ENSG00000100023",2.0,1.0,1.0,1.0,0.718,0.00158478605388]
["TCGA_UCS","TCGA-NF-A5CP-01A","7:KDM7A:140119113:-:7:DENND2A:140602542:-:rev","KDM7A--DENND2A","ENSG00000006459","ENSG00000146966",2.0,1.0,1.0,1.0,0.984,"NA"]
["TCGA_UCS","TCGA-NG-A4VU-01A","11:CD44:35139370:+:11:CAPRIN1:34089395:+:rev","CD44--CAPRIN1","ENSG00000026508","ENSG00000135387",77.0,2.0,2.0,2.0,0.233309857928203,0.0154738878143]
["TCGA_UCS","TCGA-NG-A4VU-01A","6:RPS12:132817061:+:1:HDGF:156743878:-:fusion","RPS12--HDGF","ENSG00000112306","ENSG00000143321",2.0,1.0,1.0,1.0,0.858,0.0]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127794734:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",72.0,1.0,1.0,1.0,0.911027651675272,0.00471698113208]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127796008:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",3.0,1.0,1.0,1.0,0.765,0.00471698113208]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127796071:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",5.0,1.0,1.0,1.0,0.75,0.00471698113208]
["TCGA_UCS","TCGA-QM-A5NM-01A","2:C2orf48:10142375:+:9:C9orf3:95086682:+:fusion","C2orf48--C9orf3","ENSG00000163009","ENSG00000148120",3.0,1.0,1.0,1.0,0.667,0.00414937759336]
["TCGA_UCS","TCGA-QM-A5NM-01A","14:NPAS3:33676385:+:14:AKAP6:32735658:+:rev","NPAS3--AKAP6","ENSG00000151322","ENSG00000151320",3.0,1.0,1.0,1.0,0.835,"NA"]
["TCGA_UCS","TCGA-QN-A5NN-01A","2:CFLAR:201149835:+:2:NDUFB3:201085459:+:rev","CFLAR--NDUFB3","ENSG00000003402","ENSG00000119013",4.0,1.0,1.0,1.0,0.611,"NA"]
["TCGA_UVM","TCGA-V4-A9EA-01A","19:KLK2:50873519:+:10:FGFR2:121551459:-:fusion","KLK2--FGFR2","ENSG00000167751","ENSG00000066468",4.0,3.0,3.0,3.0,0.917,0.0]
["TCGA_UVM","TCGA-V4-A9EI-01A","17:ABR:1050050:-:17:DDX42:63805071:+:strandcross","ABR--DDX42","ENSG00000159842","ENSG00000198231",1.0,1.0,1.0,1.0,0.701,0.00898203592814]
["TCGA_UVM","TCGA-V4-A9EK-01A","12:TMEM132B:125186866:+:12:AC078923.1:75631314:-:strandcross","TMEM132B--AC078923.1","ENSG00000139364","ENSG00000258077",3.0,1.0,1.0,1.0,0.93,0.0]
["TCGA_UVM","TCGA-V4-A9EO-01A","8:AGPAT5:6708887:+:8:MCPH1:6477594:+:rev","AGPAT5--MCPH1","ENSG00000155189","ENSG00000147316",2.0,2.0,1.0,1.0,0.897,"NA"]
["TCGA_UVM","TCGA-V4-A9EV-01A","14:TRAJ49:22489543:+:14:TRAV41:22320408:+:rev","TRAJ49--TRAV41","ENSG00000211840","ENSG00000211820",1.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_UVM","TCGA-V4-A9F7-01A","4:OCIAD1:48857365:+:4:KIT:54723584:+:reg","OCIAD1--KIT","ENSG00000109180","ENSG00000157404",31.0,1.0,1.0,1.0,0.601396555229906,0.0149253731343]
["TCGA_UVM","TCGA-VD-A8K7-01B","5:AC109466.1:165007412:+:5:LINC01470:152684785:-:strandcross","AC109466.1--LINC01470","ENSG00000241956","ENSG00000249484",17.0,1.0,1.0,1.0,0.752487176983861,0.0]
["TCGA_UVM","TCGA-VD-A8KA-01B","4:KLHL8:87220418:-:1:AMY2B:103565435:+:fusion","KLHL8--AMY2B","ENSG00000145332","ENSG00000240038",1.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_UVM","TCGA-VD-A8KE-01A","22:GUCD1:24554949:-:22:MB:35607443:-:rev","GUCD1--MB","ENSG00000138867","ENSG00000198125",2.0,1.0,1.0,1.0,0.815,0.00377358490566]
["TCGA_UVM","TCGA-VD-A8KE-01A","22:GUCD1:24555615:-:22:MB:35607443:-:rev","GUCD1--MB","ENSG00000138867","ENSG00000198125",2.0,1.0,1.0,1.0,0.487,0.00377358490566]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39889055:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",45.0,1.0,1.0,1.0,0.849572226801768,0.0102739726027]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39891379:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",5.0,1.0,1.0,1.0,0.328,0.0239726027397]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39891763:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",2.0,1.0,1.0,1.0,0.856,0.0102739726027]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:ADAT2:143450563:-:6:AIG1:143187629:+:strandcross","ADAT2--AIG1","ENSG00000189007","ENSG00000146416",3.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:CCNC:99568496:-:6:HDAC2-AS2:114088937:+:strandcross","CCNC--HDAC2-AS2","ENSG00000112237","ENSG00000228624",6.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:FYN:111780566:-:6:CDK19:110614666:-:reg","FYN--CDK19","ENSG00000010810","ENSG00000155111",24.0,1.0,1.0,1.0,0.589249804214591,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:MAP3K5:136791710:-:6:OSTM1:108064299:-:reg","MAP3K5--OSTM1","ENSG00000197442","ENSG00000081087",8.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:PHF3:63636150:+:6:QKI:163561982:+:reg","PHF3--QKI","ENSG00000118482","ENSG00000112531",12.0,1.0,1.0,1.0,0.497,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:PHF3:63646795:+:6:QKI:163561982:+:reg","PHF3--QKI","ENSG00000118482","ENSG00000112531",3.0,1.0,1.0,1.0,0.197,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SAMD3:130312978:-:6:GRIK2:102035341:+:strandcross","SAMD3--GRIK2","ENSG00000164483","ENSG00000164418",3.0,1.0,1.0,1.0,0.968,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SAMD3:130365120:-:6:GRIK2:102035341:+:strandcross","SAMD3--GRIK2","ENSG00000164483","ENSG00000164418",2.0,1.0,1.0,1.0,0.909,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SERINC1:122471699:-:6:AL445259.1:123462247:+:strandcross","SERINC1--AL445259.1","ENSG00000111897","ENSG00000235535",12.0,1.0,1.0,1.0,0.443,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SFT2D1:166342419:-:6:FAM46A:81491681:-:reg","SFT2D1--FAM46A","ENSG00000198818","ENSG00000112773",3.0,1.0,1.0,1.0,0.748,0.00990099009901]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SFT2D1:166342419:-:6:FAM46A:81495113:-:reg","SFT2D1--FAM46A","ENSG00000198818","ENSG00000112773",446.0,1.0,1.0,1.0,0.994532899200403,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SLC18B1:132796982:-:6:TRMT11:126021160:+:strandcross","SLC18B1--TRMT11","ENSG00000146409","ENSG00000066651",7.0,1.0,1.0,1.0,0.964,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:STX7:132503446:-:6:LMBRD1:69676541:-:reg","STX7--LMBRD1","ENSG00000079950","ENSG00000168216",655.0,2.0,1.0,1.0,0.999995475703692,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:TMEM200A:130366524:+:6:FYN:111780635:-:strandcross","TMEM200A--FYN","ENSG00000164484","ENSG00000010810",55.0,1.0,1.0,1.0,0.944280400418187,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:VTA1:142170421:+:6:AL589740.1:97969406:+:rev","VTA1--AL589740.1","ENSG00000009844","ENSG00000271860",2.0,1.0,1.0,1.0,0.239,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KM-01A","8:KIF13B:29245346:-:8:FUT10:33372804:-:rev","KIF13B--FUT10","ENSG00000197892","ENSG00000172728",3.0,1.0,1.0,1.0,0.969,0.00187265917603]
["TCGA_UVM","TCGA-VD-A8KO-01A","11:MACROD1:64151239:-:1:PARP1:226402379:-:fusion","MACROD1--PARP1","ENSG00000133315","ENSG00000143799",4.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_UVM","TCGA-VD-AA8M-01A","19:ZNF440:11814450:+:19:ECSIT:11508048:-:strandcross","ZNF440--ECSIT","ENSG00000171295","ENSG00000130159",2.0,1.0,1.0,1.0,0.948,0.00595238095238]
["TCGA_UVM","TCGA-WC-A884-01A","17:SEPT9:77402703:+:17:BCAS3:61368327:+:rev","SEPT9--BCAS3","ENSG00000184640","ENSG00000141376",69.0,1.0,1.0,1.0,0.917783754602597,0.0]
["TCGA_UVM","TCGA-WC-A884-01A","17:SEPT9:77451528:+:17:BCAS3:61368327:+:rev","SEPT9--BCAS3","ENSG00000184640","ENSG00000141376",23.0,1.0,1.0,1.0,0.722688657721649,0.0]
["TCGA_UVM","TCGA-WC-A884-01A","17:TNRC6C:78005079:+:17:RPTOR:80730560:+:reg","TNRC6C--RPTOR","ENSG00000078687","ENSG00000141564",5.0,1.0,1.0,1.0,0.721,0.00790513833992]
["TCGA_UVM","TCGA-YZ-A983-01A","4:FAM193A:2663288:+:4:NMU:55630460:-:strandcross","FAM193A--NMU","ENSG00000125386","ENSG00000109255",5.0,1.0,1.0,1.0,0.719,0.00602409638554]
["TCGA_UVM","TCGA-YZ-A983-01A","11:ESRRA:64307504:+:11:STIP1:64193078:+:rev","ESRRA--STIP1","ENSG00000173153","ENSG00000168439",1.0,1.0,1.0,1.0,0.927,"NA"]
["TCGA_UVM","TCGA-YZ-A984-01A","17:AC005899.4:32350326:+:1:SSU72:1545002:-:fusion","AC005899.4--SSU72","ENSG00000265794","ENSG00000160075",2.0,1.0,1.0,1.0,0.997,0.0]

{"sheet":"Recurrent_fusions","index":1,"n_rows":515,"n_cols":3,"rows_kept":515,"cut":false,"hidden":false,"merged":[]}
["This sheet shows all recurrent fusions found by DEEEPST (fusions found for at least two samples within a tumor type)"]
[]
["TCGA_Project","fusion","N"]
["TCGA_ACC","LSP1--SYT8",2.0]
["TCGA_ACC","HNRNPA1--AC023794.2",2.0]
["TCGA_BLCA","DHRS2--GSTM4",26.0]
["TCGA_BLCA","FGFR3--TACC3",7.0]
["TCGA_BLCA","RPS6KB1--VMP1",3.0]
["TCGA_BLCA","TSEN2--PPARG",3.0]
["TCGA_BLCA","PPARG--SYN2",3.0]
["TCGA_BLCA","PPFIA1--SHANK2",2.0]
["TCGA_BLCA","NUP107--CPM",2.0]
["TCGA_BLCA","PLPBP--ENO1",2.0]
["TCGA_BLCA","CDKAL1--NBAT1",2.0]
["TCGA_BLCA","VPS13B--BAALC-AS2",2.0]
["TCGA_BLCA","FOCAD--CDKN2B-AS1",2.0]
["TCGA_BLCA","ALDH1A2--ADAM10",2.0]
["TCGA_BLCA","LINC00511--SLC39A11",2.0]
["TCGA_BLCA","CD44--PDHX",2.0]
["TCGA_BLCA","NUP188--LRRC8A",2.0]
["TCGA_BLCA","ADGRF1--TNFRSF21",2.0]
["TCGA_BLCA","SNX31--PABPC1",2.0]
["TCGA_BLCA","SH3PXD2A--STN1",2.0]
["TCGA_BLCA","PLPP1--SLC38A9",2.0]
["TCGA_BLCA","CCSER1--AC097478.1",2.0]
["TCGA_BLCA","ABCD3--AC097059.1",2.0]
["TCGA_BLCA","ITGB6--RBMS1",2.0]
["TCGA_BLCA","AC011498.1--CHAF1A",2.0]
["TCGA_BLCA","TNFSF10--LINC02068",2.0]
["TCGA_BRCA","TTC6--MIPOL1",13.0]
["TCGA_BRCA","ESR1--CCDC170",11.0]
["TCGA_BRCA","USP22--MYH10",9.0]
["TCGA_BRCA","ZFP91--RAB6A",8.0]
["TCGA_BRCA","THSD4--LRRC49",7.0]
["TCGA_BRCA","MRPL48--DTX4",4.0]
["TCGA_BRCA","RPS6KB1--VMP1",4.0]
["TCGA_BRCA","MGAT4A--KIAA1211L",3.0]
["TCGA_BRCA","MTF2--RPL5",3.0]
["TCGA_BRCA","CDH11--LINC00922",3.0]
["TCGA_BRCA","CDC42EP4--SDK2",3.0]
["TCGA_BRCA","FOXP1--EIF4E3",3.0]
["TCGA_BRCA","DNM2--ILF3",3.0]
["TCGA_BRCA","SRPK2--PUS7",3.0]
["TCGA_BRCA","KDM4B--UHRF1",3.0]
["TCGA_BRCA","RERE--ENO1",3.0]
["TCGA_BRCA","CTTN--ANO1",3.0]
["TCGA_BRCA","ASCC1--MICU1",3.0]
["TCGA_BRCA","GIGYF2--EFHD1",3.0]
["TCGA_BRCA","GATAD2A--MAU2",3.0]
["TCGA_BRCA","FGF10--AC093297.2",3.0]
["TCGA_BRCA","PPP1CB--PLB1",3.0]
["TCGA_BRCA","FZR1--NFIC",3.0]
["TCGA_BRCA","HECTD1--AL139353.1",3.0]
["TCGA_BRCA","BPTF--PITPNC1",3.0]
["TCGA_BRCA","AC092167.1--IMMP2L",3.0]
["TCGA_BRCA","TRPS1--LINC00536",3.0]
["TCGA_BRCA","SHANK2--MYEOV",2.0]
["TCGA_BRCA","TMEM135--AAMDC",2.0]
["TCGA_BRCA","RARA--PCTP",2.0]
["TCGA_BRCA","MED13L--TRAFD1",2.0]
["TCGA_BRCA","FBXL20--MSL1",2.0]
["TCGA_BRCA","FBXL20--SYNRG",2.0]
["TCGA_BRCA","NUMA1--SHANK2",2.0]
["TCGA_BRCA","TDRD3--DIAPH3",2.0]
["TCGA_BRCA","SLC25A33--AL034417.2",2.0]
["TCGA_BRCA","CP--SOX5",2.0]
["TCGA_BRCA","KAT6A--IKBKB",2.0]
["TCGA_BRCA","GRB7--PGAP3",2.0]
["TCGA_BRCA","DHRS2--GSTM4",2.0]
["TCGA_BRCA","UVRAG--MAP6",2.0]
["TCGA_BRCA","CASC15--CDKAL1",2.0]
["TCGA_BRCA","WAC--APBB1IP",2.0]
["TCGA_BRCA","CLEC16A--LITAF",2.0]
["TCGA_BRCA","LLGL2--CA10",2.0]
["TCGA_BRCA","FIG4--WASF1",2.0]
["TCGA_BRCA","DCP2--REEP5",2.0]
["TCGA_BRCA","CACNB1--CDC6",2.0]
["TCGA_BRCA","KAT6A--ADAM2",2.0]
["TCGA_BRCA","FCHSD2--SHANK2",2.0]
["TCGA_BRCA","KMT2C--CNTNAP2",2.0]
["TCGA_BRCA","RFX3--SMARCA2",2.0]
["TCGA_BRCA","PVT1--SLC30A8",2.0]
["TCGA_BRCA","LINC01725--DDAH1",2.0]
["TCGA_BRCA","TBL1XR1--PIK3CA",2.0]
["TCGA_BRCA","MTHFD1L--THEMIS",2.0]
["TCGA_BRCA","MSI2--TEX2",2.0]
["TCGA_BRCA","AFAP1--ABLIM2",2.0]
["TCGA_BRCA","LMBR1--PTPRN2",2.0]
["TCGA_BRCA","SH3PXD2A--STN1",2.0]
["TCGA_BRCA","CTPS2--RBBP7",2.0]
["TCGA_BRCA","DCAF6--MPZL1",2.0]
["TCGA_BRCA","DLST--YLPM1",2.0]
["TCGA_BRCA","MYH9--CACNG2",2.0]
["TCGA_BRCA","MEGF8--PRR19",2.0]
["TCGA_BRCA","TNRC18--RNF216",2.0]
["TCGA_BRCA","PAWR--PPP1R12A",2.0]
["TCGA_BRCA","PTK2--SLC45A4",2.0]
["TCGA_BRCA","SLC11A2--CSRNP2",2.0]
["TCGA_BRCA","ACOT9--APOO",2.0]
["TCGA_BRCA","BCL2L14--ETV6",2.0]
["TCGA_BRCA","EPS15L1--MED26",2.0]
["TCGA_BRCA","ITGB6--RBMS1",2.0]
["TCGA_BRCA","NSD1--ZNF346",2.0]
["TCGA_BRCA","SARS--KIAA1324",2.0]
["TCGA_BRCA","MVP--KIF22",2.0]
["TCGA_BRCA","ARRB1--GDPD5",2.0]
["TCGA_BRCA","XRN2--KIZ",2.0]
["TCGA_BRCA","CHPT1--MYBPC1",2.0]
["TCGA_BRCA","FRS2--LYZ",2.0]
["TCGA_BRCA","ACER3--UVRAG",2.0]
["TCGA_BRCA","PCBP2--SP1",2.0]
["TCGA_BRCA","KIF13A--DEK",2.0]
["TCGA_BRCA","MATR3--CTNNA1",2.0]
["TCGA_BRCA","PTK2--AC040970.1",2.0]
["TCGA_BRCA","NOL4L--COMMD7",2.0]
["TCGA_BRCA","HECTD2--PCGF5",2.0]
["TCGA_BRCA","RABEP1--AC087500.1",2.0]
["TCGA_BRCA","ZCCHC8--RSRC2",2.0]
["TCGA_BRCA","PRRC2B--NUP214",2.0]
["TCGA_BRCA","TARBP1--RBM34",2.0]
["TCGA_BRCA","DNAJB6--UBE3C",2.0]
["TCGA_BRCA","FGFR2--ATE1",2.0]
["TCGA_BRCA","GRHL2--AP001330.1",2.0]
["TCGA_BRCA","KANK1--DOCK8",2.0]
["TCGA_BRCA","FAM20B--RALGPS2",2.0]
["TCGA_BRCA","ZFP36L1--ACTN1",2.0]
["TCGA_BRCA","TMEM94--MRPL58",2.0]
["TCGA_BRCA","SLC39A11--SDK2",2.0]
["TCGA_BRCA","HERC1--AC087632.1",2.0]
["TCGA_BRCA","NEMF--LINC01588",2.0]
["TCGA_BRCA","CGNL1--TCF12",2.0]
["TCGA_BRCA","CHMP4B--CBFA2T2",2.0]
["TCGA_BRCA","LTBP1--TTC27",2.0]
["TCGA_BRCA","MAN1A2--TTF2",2.0]
["TCGA_BRCA","USP13--NDUFB5",2.0]
["TCGA_BRCA","KDM2A--RHOD",2.0]
["TCGA_BRCA","GSK3B--GPR156",2.0]
["TCGA_BRCA","SMARCC1--MAP4",2.0]
["TCGA_BRCA","TET3--ACTG2",2.0]
["TCGA_BRCA","BRWD1--HMGN1",2.0]
["TCGA_BRCA","PLEKHF2--NDUFAF6",2.0]
["TCGA_BRCA","IST1--AC009097.1",2.0]
["TCGA_BRCA","CELF1--MTCH2",2.0]
["TCGA_BRCA","CSE1L--ARFGEF2",2.0]
["TCGA_BRCA","MTMR2--MAML2",2.0]
["TCGA_BRCA","TOX3--CASC16",2.0]
["TCGA_BRCA","HDLBP--THAP4",2.0]
["TCGA_BRCA","TULP4--GTF2H5",2.0]
["TCGA_BRCA","PIK3R3--LRRC41",2.0]
["TCGA_BRCA","SOGA1--SAMHD1",2.0]
["TCGA_BRCA","FGFR2--NSMCE4A",2.0]
["TCGA_BRCA","STK24--DOCK9",2.0]
["TCGA_BRCA","MCM5--TOM1",2.0]
["TCGA_BRCA","BUB1B--EIF2AK4",2.0]
["TCGA_BRCA","PDLIM3--SORBS2",2.0]
["TCGA_BRCA","ZC3H7A--BCAR4",2.0]
["TCGA_BRCA","DNAJC9--CFAP70",2.0]
["TCGA_BRCA","AFMID--SEPT9",2.0]
["TCGA_BRCA","GABRP--KCNIP1",2.0]
["TCGA_BRCA","EHMT1--ARRDC1",2.0]
["TCGA_CESC","ZC3H7A--BCAR4",5.0]
["TCGA_CESC","FGFR3--TACC3",4.0]
["TCGA_CESC","LITAF--BCAR4",4.0]
["TCGA_CESC","RIOK1--EYS",2.0]
["TCGA_CESC","PGAP3--ERBB2",2.0]
["TCGA_CESC","MYH9--TXN2",2.0]
["TCGA_CESC","CCT3--IQGAP3",2.0]
["TCGA_CESC","NXN--ABR",2.0]
["TCGA_CESC","WBP1L--SUFU",2.0]
["TCGA_CESC","GRB7--ERBB2",2.0]
["TCGA_CHOL","FGFR2--BICC1",2.0]
["TCGA_COAD","PTPRK--RSPO3",4.0]
["TCGA_COAD","CHD7--TOX",2.0]
["TCGA_COAD","ETV6--NTRK3",2.0]
["TCGA_COAD","MICALL2--TMEM120A",2.0]
["TCGA_ESCA","NCOR2--SCARB1",3.0]
["TCGA_ESCA","GRB7--MIEN1",2.0]
["TCGA_ESCA","ERBB2--PGAP3",2.0]
["TCGA_ESCA","PGAP3--ERBB2",2.0]
["TCGA_ESCA","ARID3A--PRPF31",2.0]
["TCGA_ESCA","COX6C--VPS13B",2.0]
["TCGA_ESCA","PIEZO1--CBFA2T3",2.0]
["TCGA_ESCA","PTK2--SLC45A4",2.0]
["TCGA_ESCA","TBC1D4--LMO7-AS1",2.0]
["TCGA_ESCA","AIFM2--LRRC20",2.0]
["TCGA_ESCA","SYTL2--PICALM",2.0]
["TCGA_ESCA","FUT8--FNTB",2.0]
["TCGA_ESCA","PXN--SRSF9",2.0]
["TCGA_ESCA","COL27A1--ZNF618",2.0]
["TCGA_ESCA","GNB1--CFAP74",2.0]
["TCGA_ESCA","FBXL18--RNF216",2.0]
["TCGA_ESCA","MSH2--EPCAM",2.0]
["TCGA_ESCA","ABR--YWHAE",2.0]
["TCGA_ESCA","FGFR3--TACC3",2.0]
["TCGA_GBM","EGFR--SEPT14",3.0]
["TCGA_GBM","EGFR--AC074351.1",3.0]
["TCGA_GBM","EGFR--AC073324.2",2.0]
["TCGA_GBM","KIAA1211--AC098868.1",2.0]
["TCGA_GBM","R3HDM2--TSFM",2.0]
["TCGA_GBM","FRS2--DTX3",2.0]
["TCGA_HNSC","CCAT1--CASC8",5.0]
["TCGA_HNSC","RPS6KB1--VMP1",3.0]
["TCGA_HNSC","CREB3--TLN1",2.0]
["TCGA_HNSC","LAMB3--AL031316.1",2.0]
["TCGA_HNSC","FGFR3--TACC3",2.0]
["TCGA_HNSC","WASF2--AHDC1",2.0]
["TCGA_HNSC","FHOD3--MOCOS",2.0]
["TCGA_HNSC","SH3PXD2A--STN1",2.0]
["TCGA_HNSC","ITGB6--RBMS1",2.0]
["TCGA_KIRC","SFPQ--TFE3",4.0]
["TCGA_KIRC","EGLN3--SLC25A21",2.0]
["TCGA_KIRC","ANXA2--ICE2",2.0]
["TCGA_KIRC","CSNK2B--APOM",2.0]
["TCGA_KIRC","DHX33--NLRP1",2.0]
["TCGA_KIRC","TRIP12--SLC16A14",2.0]
["TCGA_KIRP","PRCC--TFE3",3.0]
["TCGA_KIRP","TFE3--PRCC",2.0]
["TCGA_KIRP","SFPQ--TFE3",2.0]
["TCGA_LAML","PML--RARA",14.0]
["TCGA_LAML","RARA--PML",10.0]
["TCGA_LAML","CBFB--MYH11",9.0]
["TCGA_LAML","RUNX1--RUNX1T1",8.0]
["TCGA_LAML","BCR--ABL1",4.0]
["TCGA_LAML","KMT2A--MLLT10",4.0]
["TCGA_LAML","ABL1--BCR",3.0]
["TCGA_LAML","ZEB2--CXCR4",3.0]
["TCGA_LAML","KMT2A--ELL",3.0]
["TCGA_LAML","EIF4A1--ATP6V0C",2.0]
["TCGA_LAML","PICALM--MLLT10",2.0]
["TCGA_LAML","MLLT10--PICALM",2.0]
["TCGA_LAML","NUP98--NSD1",2.0]
["TCGA_LAML","NSD1--NUP98",2.0]
["TCGA_LAML","RUNX1T1--RUNX1",2.0]
["TCGA_LGG","NFASC--ATP2B4",2.0]
["TCGA_LGG","NFIC--CELF5",2.0]
["TCGA_LGG","EGFR--AC074351.1",2.0]
["TCGA_LGG","FGFR3--TACC3",2.0]
["TCGA_LGG","MRPS16--CFAP70",2.0]
["TCGA_LIHC","TCF7L2--VTI1A",4.0]
["TCGA_LIHC","TMPRSS6--PPP6R3",2.0]
["TCGA_LIHC","KIAA1109--CCNA2",2.0]
["TCGA_LIHC","CYP2E1--C1QTNF3-AMACR",2.0]
["TCGA_LIHC","SFPQ--TFEB",2.0]
["TCGA_LIHC","ALB--AC053527.1",2.0]
["TCGA_LIHC","LINC01843--UBE2B",2.0]
["TCGA_LIHC","DNMT1--AC011511.2",2.0]
["TCGA_LIHC","ELMSAN1--LINC02274",2.0]
["TCGA_LIHC","ABHD6--FLNB",2.0]
["TCGA_LIHC","KIFC3--CNGB1",2.0]
["TCGA_LIHC","UPF3A--CDC16",2.0]
["TCGA_LIHC","CYP2E1--MTG1",2.0]
["TCGA_LIHC","LDLRAD1--TMEM59",2.0]
["TCGA_LUAD","RPS6KB1--VMP1",10.0]
["TCGA_LUAD","EML4--ALK",5.0]
["TCGA_LUAD","CTDSP2--AC084033.3",3.0]
["TCGA_LUAD","LPIN2--MYOM1",3.0]
["TCGA_LUAD","RRBP1--TASP1",2.0]
["TCGA_LUAD","TAF4--TSHZ2",2.0]
["TCGA_LUAD","NCOA2--LEPROTL1",2.0]
["TCGA_LUAD","EZR--ROS1",2.0]
["TCGA_LUAD","CD74--ROS1",2.0]
["TCGA_LUAD","FTO--RBL2",2.0]
["TCGA_LUAD","UNC45A--BLM",2.0]
["TCGA_LUAD","ABR--YWHAE",2.0]
["TCGA_LUAD","KMT2E--LHFPL3",2.0]
["TCGA_LUAD","UBXN4--R3HDM1",2.0]
["TCGA_LUAD","SART3--CORO1C",2.0]
["TCGA_LUAD","ATOH8--VAMP5",2.0]
["TCGA_LUAD","PACSIN2--TTLL1",2.0]
["TCGA_LUAD","CAPZA2--MET",2.0]
["TCGA_LUAD","MTUS1--FGL1",2.0]
["TCGA_LUAD","CTNND1--ZDHHC5",2.0]
["TCGA_LUAD","EEA1--UBE2N",2.0]
["TCGA_LUAD","YAP1--C11orf70",2.0]
["TCGA_LUAD","CPS1--LANCL1-AS1",2.0]
["TCGA_LUAD","ATOH8--GNLY",2.0]
["TCGA_LUAD","HINT3--NCOA7",2.0]
["TCGA_LUAD","COPZ1--HNRNPA1",2.0]
["TCGA_LUSC","CCAT1--CASC8",7.0]
["TCGA_LUSC","TPD52L1--RNF217",5.0]
["TCGA_LUSC","TP63--TPRG1",4.0]
["TCGA_LUSC","FGFR3--TACC3",4.0]
["TCGA_LUSC","NSD3--DDHD2",3.0]
["TCGA_LUSC","SGK1--AL078590.3",3.0]
["TCGA_LUSC","CASC19--CASC8",3.0]
["TCGA_LUSC","TTC6--MIPOL1",3.0]
["TCGA_LUSC","ARL15--NDUFS4",2.0]
["TCGA_LUSC","ERGIC1--RANBP17",2.0]
["TCGA_LUSC","ATP11B--SOX2-OT",2.0]
["TCGA_LUSC","URI1--AC008991.1",2.0]
["TCGA_LUSC","TBL1XR1--KCNMB2-AS1",2.0]
["TCGA_LUSC","CCSER1--AC097478.1",2.0]
["TCGA_LUSC","NET1--AKR1C3",2.0]
["TCGA_LUSC","GCN1--RPLP0",2.0]
["TCGA_LUSC","LINC01206--SOX2-OT",2.0]
["TCGA_LUSC","XPR1--OVAAL",2.0]
["TCGA_LUSC","ACOT9--APOO",2.0]
["TCGA_LUSC","ATRX--MAGT1",2.0]
["TCGA_LUSC","PDE4D--DEPDC1B",2.0]
["TCGA_LUSC","ZBTB38--PXYLP1",2.0]
["TCGA_LUSC","CSTA--CASR",2.0]
["TCGA_LUSC","RRP12--EXOSC1",2.0]
["TCGA_LUSC","WASF2--AHDC1",2.0]
["TCGA_LUSC","RASA2--PXYLP1",2.0]
["TCGA_LUSC","FAM104A--CDC42EP4",2.0]
["TCGA_MESO","MAP1S--ECH1",2.0]
["TCGA_OV","PPP1CB--PLB1",4.0]
["TCGA_OV","ILF3--FARSA-AS1",3.0]
["TCGA_OV","AGO2--PTK2",3.0]
["TCGA_OV","XPR1--OVAAL",3.0]
["TCGA_OV","RERE--ENO1",3.0]
["TCGA_OV","MECOM--PHC3",3.0]
["TCGA_OV","FBXW11--STK10",3.0]
["TCGA_OV","WWC1--TENM2",3.0]
["TCGA_OV","SORL1--TECTA",3.0]
["TCGA_OV","PHACTR2--AIG1",3.0]
["TCGA_OV","LAPTM4B--MTDH",3.0]
["TCGA_OV","SLC38A1--AC025031.1",3.0]
["TCGA_OV","ZMYND8--EYA2",2.0]
["TCGA_OV","SAMD8--LRMDA",2.0]
["TCGA_OV","CSNK2A1--SNRPB",2.0]
["TCGA_OV","HSPA8--GRIK5",2.0]
["TCGA_OV","CDK2AP1--KCNQ1",2.0]
["TCGA_OV","TRAM2--SUPT3H",2.0]
["TCGA_OV","FARP1--STK24",2.0]
["TCGA_OV","CCNY--AL158834.2",2.0]
["TCGA_OV","LRBA--SH3D19",2.0]
["TCGA_OV","TANC1--PKP4",2.0]
["TCGA_OV","KIAA1522--RBBP4",2.0]
["TCGA_OV","SOGA1--SAMHD1",2.0]
["TCGA_OV","TANC1--DAPL1",2.0]
["TCGA_OV","NFKBID--TYROBP",2.0]
["TCGA_OV","KLHL14--CCDC178",2.0]
["TCGA_OV","MAP7--MAP3K5",2.0]
["TCGA_OV","CCSER1--AC097478.1",2.0]
["TCGA_OV","FAM222B--NUFIP2",2.0]
["TCGA_OV","HDAC1--LCK",2.0]
["TCGA_OV","USP46--SCFD2",2.0]
["TCGA_OV","KIDINS220--MBOAT2",2.0]
["TCGA_OV","SEC24A--JADE2",2.0]
["TCGA_OV","CDK13--POU6F2",2.0]
["TCGA_OV","GNB1--CFAP74",2.0]
["TCGA_OV","IQANK1--ZNF707",2.0]
["TCGA_OV","DPYSL3--JAKMIP2",2.0]
["TCGA_OV","EML1--CCNK",2.0]
["TCGA_OV","DNM2--SLC44A2",2.0]
["TCGA_OV","FGFR2--ATE1",2.0]
["TCGA_OV","CLEC16A--CIITA",2.0]
["TCGA_OV","SLC25A13--SEM1",2.0]
["TCGA_OV","ZHX1-C8orf76--ATAD2",2.0]
["TCGA_OV","XRN1--ATR",2.0]
["TCGA_OV","CAPZB--TMCO4",2.0]
["TCGA_OV","NCOR2--DHX37",2.0]
["TCGA_OV","SCAP--SMARCC1",2.0]
["TCGA_OV","MYH9--PVALB",2.0]
["TCGA_OV","YPEL1--MAPK1",2.0]
["TCGA_OV","NECTIN2--BCAM",2.0]
["TCGA_OV","NCOA3--EYA2",2.0]
["TCGA_OV","CSNK2A1--SCRT2",2.0]
["TCGA_OV","SNTB2--TANGO6",2.0]
["TCGA_OV","NSD1--ZNF346",2.0]
["TCGA_OV","PDE4D--DEPDC1B",2.0]
["TCGA_OV","MECOM--LRRC34",2.0]
["TCGA_OV","KMT2E--LHFPL3",2.0]
["TCGA_OV","C3--GPR108",2.0]
["TCGA_OV","SRPK2--PUS7",2.0]
["TCGA_OV","CTDSPL2--CASC4",2.0]
["TCGA_OV","MTMR3--ZNRF3",2.0]
["TCGA_OV","LGR6--GPR37L1",2.0]
["TCGA_OV","PARD3--CUL2",2.0]
["TCGA_OV","CREBRF--ATP6V0E1",2.0]
["TCGA_PAAD","CLPS--AMY2B",3.0]
["TCGA_PAAD","PNLIP--AMY2B",2.0]
["TCGA_PAAD","PRSS1--CPA1",2.0]
["TCGA_PCPG","UBTF--MAML3",7.0]
["TCGA_PRAD","TMPRSS2--ERG",182.0]
["TCGA_PRAD","SLC45A3--ERG",11.0]
["TCGA_PRAD","SCHLAP1--C1QTNF3-AMACR",10.0]
["TCGA_PRAD","TTC6--MIPOL1",7.0]
["TCGA_PRAD","SLC45A3--ETV1",6.0]
["TCGA_PRAD","TMPRSS2--ETV4",6.0]
["TCGA_PRAD","TMPRSS2--ETV1",4.0]
["TCGA_PRAD","NDRG1--ERG",4.0]
["TCGA_PRAD","AL121790.1--ETV1",3.0]
["TCGA_PRAD","ZBTB20--LSAMP",3.0]
["TCGA_PRAD","ERG--TMPRSS2",3.0]
["TCGA_PRAD","CTNND1--AMACR",3.0]
["TCGA_PRAD","TTC6--AL162464.1",3.0]
["TCGA_PRAD","DANCR--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","AP001122.1--SLC30A4",2.0]
["TCGA_PRAD","LUC7L2--ETV1",2.0]
["TCGA_PRAD","PCA3--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","HID1--ARHGEF26-AS1",2.0]
["TCGA_PRAD","AKAP9--CDK14",2.0]
["TCGA_PRAD","ABCC4--GPC6",2.0]
["TCGA_PRAD","AC097478.1--PDCD10",2.0]
["TCGA_PRAD","ACPP--ZNF462",2.0]
["TCGA_PRAD","TRPV6--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","SLC30A4--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","TTC3--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","MATR3--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","MAGI1--SUCLG2",2.0]
["TCGA_PRAD","TMPRSS2--DGKG",2.0]
["TCGA_PRAD","TMPRSS2--ETV5",2.0]
["TCGA_PRAD","NAALADL2--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","TRIM33--CSDE1",2.0]
["TCGA_PRAD","SEC23B--KAT14",2.0]
["TCGA_PRAD","ACSL3--SGPP2",2.0]
["TCGA_PRAD","CAMKK2--KDM2B",2.0]
["TCGA_PRAD","ST7--CAPZA2",2.0]
["TCGA_PRAD","FRYL--OCIAD2",2.0]
["TCGA_PRAD","KAT6B--ADK",2.0]
["TCGA_PRAD","FBXL3--MYCBP2",2.0]
["TCGA_PRAD","BEND7--FRMD4A",2.0]
["TCGA_READ","PTPRK--RSPO3",3.0]
["TCGA_READ","TCF7L2--VTI1A",2.0]
["TCGA_SARC","CTDSP2--CPM",2.0]
["TCGA_SARC","TRIO--TERT",2.0]
["TCGA_SARC","CPSF6--LINC01481",2.0]
["TCGA_SARC","CPSF6--TMBIM4",2.0]
["TCGA_SARC","CTDSP2--AC024909.1",2.0]
["TCGA_SARC","SS18--SSX1",2.0]
["TCGA_SARC","ATRX--MIR325HG",2.0]
["TCGA_SKCM","TTYH3--MAD1L1",5.0]
["TCGA_SKCM","SAMMSON--MITF",3.0]
["TCGA_SKCM","PMEL--NDUFB1",2.0]
["TCGA_SKCM","AZIN1--ATP6V1C1",2.0]
["TCGA_SKCM","TTYH3--ASPSCR1",2.0]
["TCGA_SKCM","TTYH3--C7orf50",2.0]
["TCGA_SKCM","PMEL--PAEP",2.0]
["TCGA_SKCM","TYR--MXI1",2.0]
["TCGA_SKCM","KCNAB2--ACOT7",2.0]
["TCGA_SKCM","HPN-AS1--LGI4",2.0]
["TCGA_SKCM","ACACB--UNG",2.0]
["TCGA_SKCM","SLC25A13--SEM1",2.0]
["TCGA_SKCM","MRPS16--CFAP70",2.0]
["TCGA_SKCM","CLIP1--RSRC2",2.0]
["TCGA_SKCM","TBC1D15--RAB21",2.0]
["TCGA_SKCM","HDAC4--NDUFA10",2.0]
["TCGA_SKCM","OGG1--MTMR14",2.0]
["TCGA_SKCM","LRCH1--AL138686.1",2.0]
["TCGA_SKCM","RPS6KB1--VMP1",2.0]
["TCGA_STAD","KMT2E--LHFPL3",4.0]
["TCGA_STAD","EGFR--VOPP1",3.0]
["TCGA_STAD","PTPRK--RSPO3",3.0]
["TCGA_STAD","RPS6KB1--VMP1",3.0]
["TCGA_STAD","ASCC1--MICU1",3.0]
["TCGA_STAD","CD24--CRYBG1",2.0]
["TCGA_STAD","NDUFA4--PHF14",2.0]
["TCGA_STAD","PVT1--QRSL1",2.0]
["TCGA_STAD","VPS13B--STK3",2.0]
["TCGA_STAD","LARP4B--WDR37",2.0]
["TCGA_STAD","EPSTI1--DNAJC15",2.0]
["TCGA_STAD","NEDD4L--ALPK2",2.0]
["TCGA_STAD","C1orf159--AURKAIP1",2.0]
["TCGA_STAD","ADGRG7--LNP1",2.0]
["TCGA_STAD","AP2A2--TALDO1",2.0]
["TCGA_STAD","KDM5A--NINJ2",2.0]
["TCGA_STAD","WIPF2--PSMD3",2.0]
["TCGA_STAD","TOP2A--SMARCE1",2.0]
["TCGA_STAD","STK24--DOCK9",2.0]
["TCGA_STAD","CCND3--TRERF1",2.0]
["TCGA_STAD","SLC5A1--YWHAH",2.0]
["TCGA_STAD","SLC12A2--CCDC192",2.0]
["TCGA_STAD","ZFP90--NFATC3",2.0]
["TCGA_STAD","RBM17--FAM208B",2.0]
["TCGA_STAD","URI1--PLEKHF1",2.0]
["TCGA_STAD","PTK2--SLC45A4",2.0]
["TCGA_STAD","HDAC1--EIF3I",2.0]
["TCGA_STAD","TNRC18--RNF216",2.0]
["TCGA_STAD","RNF169--POLD3",2.0]
["TCGA_STAD","EPB41L1--PHF20",2.0]
["TCGA_STAD","PRELID2--GRXCR2",2.0]
["TCGA_STAD","TJP2--PIP5K1B",2.0]
["TCGA_STAD","CATSPERB--TRIP11",2.0]
["TCGA_STAD","CASP10--CFLAR",2.0]
["TCGA_TGCT","SRM--EXOSC10",2.0]
["TCGA_THCA","CCDC6--RET",12.0]
["TCGA_THCA","RAF1--AGGF1",7.0]
["TCGA_THCA","ETV6--NTRK3",6.0]
["TCGA_THCA","PAX8--PPARG",5.0]
["TCGA_THCA","TG--IGHV7-81",4.0]
["TCGA_THCA","NCOA4--RET",4.0]
["TCGA_THCA","PPARG--PAX8",3.0]
["TCGA_THCA","PTCSC3--SFTA3",3.0]
["TCGA_THCA","TG--CHMP1A",2.0]
["TCGA_THCA","SND1--BRAF",2.0]
["TCGA_THCA","TG--THADA",2.0]
["TCGA_THCA","ERC1--RET",2.0]
["TCGA_THCA","BRAF--SND1",2.0]
["TCGA_THCA","AKT2--SERTAD1",2.0]
["TCGA_THCA","CREBRF--ATP6V0E1",2.0]
["TCGA_THCA","ANKHD1-EIF4EBP3--CYSTM1",2.0]
["TCGA_UCEC","TNRC18--RNF216",3.0]
["TCGA_UCEC","DNM1L--FGD4",2.0]
["TCGA_UCEC","HIPK2--PARP12",2.0]
["TCGA_UCEC","KMT2E--LHFPL3",2.0]
["TCGA_UCEC","SMARCC1--MAP4",2.0]
["TCGA_UCEC","PIEZO1--GALNS",2.0]
["TCGA_UCEC","GAPVD1--RABEPK",2.0]
["TCGA_UCEC","BABAM2--GPN1",2.0]
["TCGA_UCEC","CCDC6--ANK3",2.0]
["TCGA_UCEC","TANC1--DAPL1",2.0]
["TCGA_UCEC","WDR59--CFDP1",2.0]
["TCGA_UCEC","PHYHIPL--LINC00844",2.0]
["TCGA_UCEC","KLC1--MARK3",2.0]
["TCGA_UCEC","REV3L--FYN",2.0]
["TCGA_UCEC","MAL2--COLEC10",2.0]
["TCGA_UCEC","AP2A2--DRD4",2.0]
["TCGA_UCEC","NOS1AP--ATF6",2.0]
["TCGA_UCEC","CCDC117--HSCB",2.0]
["TCGA_UCEC","ZBTB7A--MAP2K2",2.0]
["TCGA_UCEC","TNFSF10--NCEH1",2.0]
["TCGA_UCS","CD44--CAPRIN1",2.0]
["TCGA_UCS","RICTOR--LINC02217",2.0]

{"sheet":"Novel_fusions","index":2,"n_rows":12757,"n_cols":12,"rows_kept":4500,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["This sheet shows all novel fusions that have been found by DEEPEST-Fusion"]
[]
["TCGA_Project","Sample","junction","fusion","gene_id_1","gene_id_2","numReads","SBT_count","DEEPEST-Fusion_count","DEEPEST-Fusion_count_2","junction_cdf","emp.p"]
["TCGA_ACC","TCGA-OR-A5J1-01A","12:SCARB1:124863595:-:17:UBB:16381902:+:fusion","SCARB1--UBB","ENSG00000073060","ENSG00000170315",2.0,1.0,1.0,1.0,0.825,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","14:MEG3:100826217:+:17:UBB:16381902:+:fusion","MEG3--UBB","ENSG00000214548","ENSG00000170315",2.0,1.0,1.0,1.0,0.283,0.0138408304498]
["TCGA_ACC","TCGA-OR-A5J1-01A","17:RPAIN:5422829:+:11:TAF10:6611818:-:fusion","RPAIN--TAF10","ENSG00000129197","ENSG00000166337",1.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","2:PCBP1-AS1:70051203:-:11:C2CD3:74013525:-:fusion","PCBP1-AS1--C2CD3","ENSG00000179818","ENSG00000168014",7.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:HEXB:74697106:+:5:AC112206.2:67793083:+:rev","HEXB--AC112206.2","ENSG00000049860","ENSG00000249364",4.0,1.0,1.0,1.0,0.931,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:IL6ST:55951464:-:5:LINC00604:40267356:+:strandcross","IL6ST--LINC00604","ENSG00000134352","ENSG00000250585",28.0,1.0,1.0,1.0,0.890328425733631,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKIV2L2:55379195:+:5:AC016642.1:58742000:-:strandcross","SKIV2L2--AC016642.1","ENSG00000039123","ENSG00000248475",100.0,1.0,1.0,1.0,0.878493975062284,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC008808.2:50966132:-:strandcross","SKP2--AC008808.2","ENSG00000145604","ENSG00000250360",6.0,1.0,1.0,1.0,0.627,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44777101:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",2.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44777328:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",5.0,1.0,1.0,1.0,0.499,0.00692041522491]
["TCGA_ACC","TCGA-OR-A5J1-01A","5:SKP2:36153042:+:5:AC093297.2:44786952:-:strandcross","SKP2--AC093297.2","ENSG00000145604","ENSG00000251141",3.0,1.0,1.0,1.0,0.829,0.00346020761246]
["TCGA_ACC","TCGA-OR-A5J3-01A","12:SLC11A2:51026315:-:12:POU6F1:51199868:-:rev","SLC11A2--POU6F1","ENSG00000110911","ENSG00000184271",1.0,1.0,1.0,1.0,0.833,"NA"]
["TCGA_ACC","TCGA-OR-A5J5-01A","7:CALN1:72412058:-:7:TYW1B:72575719:-:rev","CALN1--TYW1B","ENSG00000183166","ENSG00000277149",2.0,1.0,1.0,1.0,0.978,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65531683:+:16:AC012184.3:70316142:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",4.0,1.0,1.0,1.0,0.299,0.0192307692308]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65531683:+:16:AC012184.3:70317373:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",10.0,1.0,1.0,1.0,0.846,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65532805:+:16:AC012184.3:70316142:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",13.0,1.0,1.0,1.0,0.167,0.0384615384615]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:SCYL1:65532805:+:16:AC012184.3:70317373:-:fusion","SCYL1--AC012184.3","ENSG00000142186","ENSG00000261777",16.0,1.0,1.0,1.0,0.852744876988883,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:DLK1:100734428:+:7:ZNF138:64831451:+:fusion","DLK1--ZNF138","ENSG00000185559","ENSG00000197008",2.0,1.0,1.0,1.0,0.784,0.00320512820513]
["TCGA_ACC","TCGA-OR-A5J7-01A","9:AL157935.2:127885186:-:19:MED16:868946:-:fusion","AL157935.2--MED16","ENSG00000257524","ENSG00000175221",3.0,1.0,1.0,1.0,0.357,0.00961538461538]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:AP2A2:977224:+:11:DRD4:639433:+:rev","AP2A2--DRD4","ENSG00000183020","ENSG00000069696",10.0,1.0,1.0,1.0,0.673,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","11:AP2A2:977224:+:11:DRD4:640401:+:rev","AP2A2--DRD4","ENSG00000183020","ENSG00000069696",12.0,1.0,1.0,1.0,0.948,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","14:LIN52:74095985:+:14:AC005520.2:73789027:+:rev","LIN52--AC005520.2","ENSG00000205659","ENSG00000259065",2.0,1.0,1.0,1.0,0.705,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","16:RAB11FIP3:461497:+:16:NME4:398990:+:rev","RAB11FIP3--NME4","ENSG00000090565","ENSG00000103202",12.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","21:IFNAR1:33325131:+:21:IL10RB:33288104:+:rev","IFNAR1--IL10RB","ENSG00000142166","ENSG00000243646",9.0,1.0,1.0,1.0,0.86,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","2:CEP68:65056528:+:2:AC012368.1:64201748:+:rev","CEP68--AC012368.1","ENSG00000011523","ENSG00000225889",3.0,1.0,1.0,1.0,0.759,"NA"]
["TCGA_ACC","TCGA-OR-A5J7-01A","3:ITGA9:37629336:+:3:GOLGA4:37302185:+:rev","ITGA9--GOLGA4","ENSG00000144668","ENSG00000144674",6.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_ACC","TCGA-OR-A5J8-01A","1:ENO1:8874824:-:1:PRDX1:45519054:-:rev","ENO1--PRDX1","ENSG00000074800","ENSG00000117450",3.0,1.0,1.0,1.0,0.603,0.00712589073634]
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["TCGA_BLCA","TCGA-BT-A20W-01A","1:ANXA9:150986661:+:1:MRPL9:151760031:-:strandcross","ANXA9--MRPL9","ENSG00000143412","ENSG00000143436",13.0,2.0,2.0,2.0,0.37,0.041095890411]
["TCGA_BLCA","TCGA-BT-A20W-01A","1:ANXA9:150986661:+:1:MRPL9:151760181:-:strandcross","ANXA9--MRPL9","ENSG00000143412","ENSG00000143436",29.0,2.0,2.0,2.0,0.756487760449244,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","5:CCT5:10254205:+:5:LINC02063:4143247:+:rev","CCT5--LINC02063","ENSG00000150753","ENSG00000250921",2.0,1.0,1.0,1.0,0.749,0.0]
["TCGA_BLCA","TCGA-BT-A20W-01A","2:KIF5C:148983766:+:2:EPC2:148690214:+:rev","KIF5C--EPC2","ENSG00000168280","ENSG00000135999",4.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BLCA","TCGA-BT-A2LA-01A","20:XRN2:21368590:+:20:KIZ:21229011:+:rev","XRN2--KIZ","ENSG00000088930","ENSG00000088970",2.0,1.0,2.0,1.0,0.769,"NA"]
["TCGA_BLCA","TCGA-BT-A2LB-01A","16:MARF1:15630332:-:16:IQCK:19856487:+:strandcross","MARF1--IQCK","ENSG00000166783","ENSG00000174628",76.0,1.0,1.0,1.0,0.644122606986611,0.008]
["TCGA_BLCA","TCGA-BT-A2LB-01A","16:MARF1:15631381:-:16:IQCK:19856487:+:strandcross","MARF1--IQCK","ENSG00000166783","ENSG00000174628",14.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-BT-A2LD-01A","4:ABCG2:88139793:-:4:AC092674.1:77399794:-:reg","ABCG2--AC092674.1","ENSG00000118777","ENSG00000249036",9.0,1.0,1.0,1.0,0.846,0.00966183574879]
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["TCGA_BLCA","TCGA-BT-A42C-01A","11:FCHSD2:72902543:-:11:AP001107.5:66416793:+:strandcross","FCHSD2--AP001107.5","ENSG00000137478","ENSG00000254510",8.0,1.0,1.0,1.0,0.497,0.00849858356941]
["TCGA_BLCA","TCGA-BT-A42E-01A","20:DHX35:38983776:+:3:AC026167.1:6358901:+:fusion","DHX35--AC026167.1","ENSG00000101452","ENSG00000226022",14.0,1.0,1.0,1.0,0.269,0.0145454545455]
["TCGA_BLCA","TCGA-BT-A42F-01A","6:FOXO3:108561829:+:6:AL359313.1:142528383:-:strandcross","FOXO3--AL359313.1","ENSG00000118689","ENSG00000236366",3.0,1.0,1.0,1.0,0.312,0.0123456790123]
["TCGA_BLCA","TCGA-C4-A0F0-01A","10:PTEN:87894109:+:10:MINPP1:87552082:+:rev","PTEN--MINPP1","ENSG00000171862","ENSG00000107789",2.0,2.0,2.0,1.0,0.861,"NA"]
["TCGA_BLCA","TCGA-C4-A0F1-01A","8:AC090809.1:36701821:-:8:TPD52:80064593:-:rev","AC090809.1--TPD52","ENSG00000253363","ENSG00000276418",7.0,1.0,1.0,1.0,0.263,0.0232018561485]
["TCGA_BLCA","TCGA-C4-A0F7-01A","19:ZNF829:36915796:-:12:RPL6:112410405:-:fusion","ZNF829--RPL6","ENSG00000185869","ENSG00000089009",2.0,1.0,1.0,1.0,0.596,0.00882352941176]
["TCGA_BLCA","TCGA-C4-A0F7-01A","8:RAB11FIP1:37899071:-:20:AL121830.1:19693462:-:fusion","RAB11FIP1--AL121830.1","ENSG00000156675","ENSG00000232675",3.0,1.0,1.0,1.0,0.542,0.00882352941176]
["TCGA_BLCA","TCGA-C4-A0F7-01A","20:SLC23A2:4970793:-:20:LINC00658:5445746:-:rev","SLC23A2--LINC00658","ENSG00000089057","ENSG00000226995",18.0,1.0,1.0,1.0,0.733457565332688,"NA"]
["TCGA_BLCA","TCGA-CF-A1HR-01A","19:NOTCH3:15165368:-:19:LINC01791:31204746:+:strandcross","NOTCH3--LINC01791","ENSG00000074181","ENSG00000267777",54.0,1.0,1.0,1.0,0.92057280972646,0.00657894736842]
["TCGA_BLCA","TCGA-CF-A1HR-01A","19:NOTCH3:15165368:-:19:LINC01791:31207499:+:strandcross","NOTCH3--LINC01791","ENSG00000074181","ENSG00000267777",63.0,1.0,1.0,1.0,0.9050715085281,0.00657894736842]
["TCGA_BLCA","TCGA-CF-A1HR-01A","7:LMTK2:98194572:+:2:AC010149.1:230520673:-:fusion","LMTK2--AC010149.1","ENSG00000164715","ENSG00000235419",9.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BLCA","TCGA-CF-A1HS-01A","11:MAP3K11:65605761:-:3:AC128709.2:197457783:-:fusion","MAP3K11--AC128709.2","ENSG00000173327","ENSG00000235126",5.0,1.0,1.0,1.0,0.894,0.00467289719626]
["TCGA_BLCA","TCGA-CF-A1HS-01A","12:PPP1R12A:79805592:-:5:NPM1:171410527:+:fusion","PPP1R12A--NPM1","ENSG00000058272","ENSG00000181163",11.0,1.0,1.0,1.0,0.718,0.00934579439252]
["TCGA_BLCA","TCGA-CF-A1HS-01A","5:NPM1:171405403:+:12:AC073569.1:79824990:+:fusion","NPM1--AC073569.1","ENSG00000181163","ENSG00000258044",17.0,1.0,1.0,1.0,0.676287707383574,0.00934579439252]
["TCGA_BLCA","TCGA-CF-A3MH-01A","12:GNPTAB:101830559:-:12:WASHC3:102046119:-:rev","GNPTAB--WASHC3","ENSG00000111670","ENSG00000120860",3.0,2.0,2.0,2.0,0.948,"NA"]
["TCGA_BLCA","TCGA-CF-A3MH-01A","6:WDR27:169602219:-:6:PHF10:169718918:-:rev","WDR27--PHF10","ENSG00000184465","ENSG00000130024",3.0,1.0,1.0,1.0,0.656,"NA"]
["TCGA_BLCA","TCGA-CF-A47V-01A","11:PPFIA1:70325011:+:11:TPCN2:69135435:+:rev","PPFIA1--TPCN2","ENSG00000131626","ENSG00000162341",73.0,1.0,1.0,1.0,0.95336111712963,0.0]
["TCGA_BLCA","TCGA-CF-A47V-01A","4:ZFYVE28:2418285:-:11:MYEOV:69341510:+:fusion","ZFYVE28--MYEOV","ENSG00000159733","ENSG00000172927",2.0,1.0,1.0,1.0,0.736,0.00290697674419]
["TCGA_BLCA","TCGA-CF-A47V-01A","4:RNF4:2596329:+:4:TACC3:1723421:+:rev","RNF4--TACC3","ENSG00000063978","ENSG00000013810",3.0,1.0,1.0,1.0,0.45,"NA"]
["TCGA_BLCA","TCGA-CF-A5UA-01A","12:FRS2:69470530:+:12:NUDT4:93394609:+:reg","FRS2--NUDT4","ENSG00000166225","ENSG00000173598",2.0,1.0,1.0,1.0,0.808,0.0]
["TCGA_BLCA","TCGA-CF-A8HX-01A","11:CCND1:69641511:+:11:AP003555.1:70056535:-:strandcross","CCND1--AP003555.1","ENSG00000110092","ENSG00000248844",5.0,1.0,1.0,1.0,0.448,0.00557103064067]
["TCGA_BLCA","TCGA-CU-A0YO-01A","21:UBE2G2:44801706:-:11:AP001979.2:133810169:-:fusion","UBE2G2--AP001979.2","ENSG00000184787","ENSG00000255258",4.0,1.0,1.0,1.0,0.839,0.00529100529101]
["TCGA_BLCA","TCGA-CU-A0YO-01A","6:CRYBG1:106451832:+:6:PDSS2:107193854:-:strandcross","CRYBG1--PDSS2","ENSG00000112297","ENSG00000164494",4.0,1.0,1.0,1.0,0.849,0.00529100529101]
["TCGA_BLCA","TCGA-CU-A0YR-01A","8:UBR5:102360071:-:8:ZFHX4-AS1:76502846:-:reg","UBR5--ZFHX4-AS1","ENSG00000104517","ENSG00000253661",13.0,1.0,1.0,1.0,0.195,0.0531400966184]
["TCGA_BLCA","TCGA-CU-A3QU-01A","17:SRR:2304017:+:17:DPH1:2033505:+:rev","SRR--DPH1","ENSG00000167720","ENSG00000108963",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BLCA","TCGA-CU-A5W6-01A","16:PLA2G15:68249446:+:16:NUTF2:67868340:+:rev","PLA2G15--NUTF2","ENSG00000103066","ENSG00000102898",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-CU-A5W6-01A","7:DNAJB6:157358637:+:7:MNX1-AS2:157006877:+:rev","DNAJB6--MNX1-AS2","ENSG00000105993","ENSG00000235029",2.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:17:GALK1:75758127:-:strandcross","ERBB2--GALK1","ENSG00000141736","ENSG00000108479",2.0,2.0,1.0,1.0,0.954,0.00215517241379]
["TCGA_BLCA","TCGA-DK-A1A5-01A","21:LINC00649:33945895:+:21:RSPH1:42476047:-:strandcross","LINC00649--RSPH1","ENSG00000237945","ENSG00000160188",4.0,1.0,1.0,1.0,0.26,0.0193965517241]
["TCGA_BLCA","TCGA-DK-A1A6-01A","11:ANO1:70171039:+:11:AP003555.1:70056535:-:strandcross","ANO1--AP003555.1","ENSG00000131620","ENSG00000248844",13.0,1.0,1.0,1.0,0.647,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","17:LINC00482:81309185:-:1:SERINC2:31432967:+:fusion","LINC00482--SERINC2","ENSG00000185168","ENSG00000168528",7.0,3.0,2.0,2.0,0.873,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:ESRP1:94668250:+:8:TRIQK:92954564:-:strandcross","ESRP1--TRIQK","ENSG00000104413","ENSG00000205133",2.0,1.0,1.0,1.0,0.851,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","8:STK3:98547969:-:11:AP001528.2:86922098:-:fusion","STK3--AP001528.2","ENSG00000104375","ENSG00000255471",3.0,1.0,1.0,1.0,0.872,0.00352112676056]
["TCGA_BLCA","TCGA-DK-A1A6-01A","14:MARK3:103462461:+:14:TRAF3:102870185:+:rev","MARK3--TRAF3","ENSG00000075413","ENSG00000131323",2.0,1.0,1.0,1.0,0.982,"NA"]
["TCGA_BLCA","TCGA-DK-A1A7-01A","8:KAT6A:42048378:-:8:AC100818.1:35944244:+:strandcross","KAT6A--AC100818.1","ENSG00000083168","ENSG00000253452",5.0,1.0,1.0,1.0,0.342,0.00913242009132]
["TCGA_BLCA","TCGA-DK-A1AA-01A","10:VPS26A:69124280:+:10:HNRNPH3:68339440:+:rev","VPS26A--HNRNPH3","ENSG00000122958","ENSG00000096746",1.0,1.0,1.0,1.0,0.887,"NA"]
["TCGA_BLCA","TCGA-DK-A1AB-01A","15:B2M:44711613:+:15:EIF3J:44557489:+:rev","B2M--EIF3J","ENSG00000166710","ENSG00000104131",2.0,1.0,1.0,1.0,0.91,"NA"]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51898930:-:11:PPP1CA:67401199:-:fusion","PCMTD1--PPP1CA","ENSG00000168300","ENSG00000172531",4.0,1.0,1.0,1.0,0.705,0.00879765395894]
["TCGA_BLCA","TCGA-DK-A1AC-01A","8:SNTG1:50172635:+:8:AC064807.3:51996267:-:strandcross","SNTG1--AC064807.3","ENSG00000147481","ENSG00000254136",43.0,1.0,1.0,1.0,0.915233603999015,0.0]
["TCGA_BLCA","TCGA-DK-A1AD-01A","22:DGCR2:19063202:-:22:Z99774.1:26669438:-:rev","DGCR2--Z99774.1","ENSG00000070413","ENSG00000206028",6.0,1.0,1.0,1.0,0.448,0.0153452685422]
["TCGA_BLCA","TCGA-DK-A1AD-01A","2:EPHA4:221563731:-:2:MTX2:176296860:+:strandcross","EPHA4--MTX2","ENSG00000116106","ENSG00000128654",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BLCA","TCGA-DK-A1AD-01A","15:ALDH1A2:58225614:-:15:ADAM10:58611991:-:rev","ALDH1A2--ADAM10","ENSG00000128918","ENSG00000137845",5.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BLCA","TCGA-DK-A1AD-01A","9:KDM4C:6893232:+:9:UHRF2:6420912:+:rev","KDM4C--UHRF2","ENSG00000107077","ENSG00000147854",2.0,3.0,3.0,2.0,0.905,"NA"]
["TCGA_BLCA","TCGA-DK-A1AE-01A","8:FZD6:103300284:+:8:AC104248.1:109044127:-:strandcross","FZD6--AC104248.1","ENSG00000164930","ENSG00000253796",28.0,1.0,1.0,1.0,0.868763849666726,0.00446428571429]
["TCGA_BLCA","TCGA-DK-A1AE-01A","9:FOCAD:20953065:+:9:LINC01239:22674443:+:reg","FOCAD--LINC01239","ENSG00000188352","ENSG00000234840",1.0,1.0,1.0,1.0,0.747,0.00446428571429]
["TCGA_BLCA","TCGA-DK-A1AE-01A","X:AC073529.1:11055936:-:X:FAM9B:9033075:-:reg","AC073529.1--FAM9B","ENSG00000234129","ENSG00000177138",2.0,1.0,1.0,1.0,0.203,0.0178571428571]
["TCGA_BLCA","TCGA-DK-A2I1-01A","22:FBLN1:45503064:+:3:CNBP:129171771:-:fusion","FBLN1--CNBP","ENSG00000077942","ENSG00000169714",2.0,1.0,1.0,1.0,0.883,0.00221238938053]
["TCGA_BLCA","TCGA-DK-A2I1-01A","20:RBL1:37095773:-:20:MROH8:37101418:-:rev","RBL1--MROH8","ENSG00000080839","ENSG00000101353",2.0,1.0,1.0,1.0,0.414,"NA"]
["TCGA_BLCA","TCGA-DK-A2I2-01A","3:LINC02005:73808668:+:1:NME7:169132817:-:fusion","LINC02005--NME7","ENSG00000242741","ENSG00000143156",3.0,1.0,1.0,1.0,0.809,0.00444444444444]
["TCGA_BLCA","TCGA-DK-A2I2-01A","9:ZBTB26:122931064:-:9:STRBP:123184298:-:rev","ZBTB26--STRBP","ENSG00000171448","ENSG00000165209",2.0,1.0,1.0,1.0,0.855,"NA"]
["TCGA_BLCA","TCGA-DK-A2I6-01A","19:ZNF577:51886821:-:19:YIF1B:38309057:-:reg","ZNF577--YIF1B","ENSG00000161551","ENSG00000167645",6.0,1.0,1.0,1.0,0.597,0.0028901734104]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:NUBPL:31787873:+:14:AL049869.2:64552888:-:strandcross","NUBPL--AL049869.2","ENSG00000151413","ENSG00000259076",1.0,1.0,1.0,1.0,0.773,0.00911854103343]
["TCGA_BLCA","TCGA-DK-A3IK-01A","14:NUBPL:31787873:+:14:AL049869.2:64559526:-:strandcross","NUBPL--AL049869.2","ENSG00000151413","ENSG00000259076",4.0,1.0,1.0,1.0,0.449,0.0121580547112]
["TCGA_BLCA","TCGA-DK-A3IK-01A","2:RBMS1:160367216:-:17:CACNB1:39191593:-:fusion","RBMS1--CACNB1","ENSG00000153250","ENSG00000067191",2.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_BLCA","TCGA-DK-A3IK-01A","6:ZFAND3:37820016:+:6:C6orf48:31835411:+:rev","ZFAND3--C6orf48","ENSG00000156639","ENSG00000204387",4.0,1.0,1.0,1.0,0.35,0.0182370820669]
["TCGA_BLCA","TCGA-DK-A3IK-01A","2:XRCC5:216127674:+:2:ATIC:215332382:+:rev","XRCC5--ATIC","ENSG00000079246","ENSG00000138363",2.0,1.0,1.0,1.0,0.985,"NA"]
["TCGA_BLCA","TCGA-DK-A3IM-01A","20:PSMF1:1135306:+:6:GMDS-AS1:2283499:+:fusion","PSMF1--GMDS-AS1","ENSG00000125818","ENSG00000250903",2.0,1.0,1.0,1.0,0.943,0.00223713646532]
["TCGA_BLCA","TCGA-DK-A3IM-01A","20:PSMF1:1135306:+:6:GMDS-AS1:2352339:+:fusion","PSMF1--GMDS-AS1","ENSG00000125818","ENSG00000250903",3.0,1.0,1.0,1.0,0.737,0.00671140939597]
["TCGA_BLCA","TCGA-DK-A3IM-01A","3:FNDC3B:172112590:+:3:LINC01192:163337236:-:strandcross","FNDC3B--LINC01192","ENSG00000075420","ENSG00000241369",3.0,1.0,1.0,1.0,0.826,0.00671140939597]
["TCGA_BLCA","TCGA-DK-A3IN-01A","1:PEF1:31632495:-:1:AL445248.1:32054514:-:rev","PEF1--AL445248.1","ENSG00000162517","ENSG00000203325",3.0,1.0,1.0,1.0,0.528,"NA"]
["TCGA_BLCA","TCGA-DK-A3IS-01A","20:CYP24A1:54157169:-:4:AC093323.1:6674993:+:fusion","CYP24A1--AC093323.1","ENSG00000019186","ENSG00000170846",2.0,1.0,1.0,1.0,0.661,0.00815217391304]
["TCGA_BLCA","TCGA-DK-A3IS-01A","21:AP001065.1:44486230:+:21:AP000317.1:34324736:+:rev","AP001065.1--AP000317.1","ENSG00000228709","ENSG00000214955",29.0,1.0,1.0,1.0,0.754249499639688,0.0054347826087]
["TCGA_BLCA","TCGA-DK-A3IS-01A","4:SLC2A9:10018975:-:4:WDR1:10088741:-:rev","SLC2A9--WDR1","ENSG00000109667","ENSG00000071127",2.0,1.0,1.0,1.0,0.756,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","2:WDR33:127763062:-:20:GNAS:58895612:+:fusion","WDR33--GNAS","ENSG00000136709","ENSG00000087460",3.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BLCA","TCGA-DK-A3IT-01A","17:LINC00511:72592203:-:17:SLC39A11:72736719:-:rev","LINC00511--SLC39A11","ENSG00000227036","ENSG00000133195",9.0,6.0,5.0,3.0,0.636,"NA"]
["TCGA_BLCA","TCGA-DK-A3IT-01A","2:AFTPH:64553409:+:2:UGP2:63882466:+:rev","AFTPH--UGP2","ENSG00000119844","ENSG00000169764",1.0,1.0,1.0,1.0,0.802,"NA"]
["TCGA_BLCA","TCGA-DK-A3IV-01A","5:MAT2B:163512196:+:5:RARS:168493894:+:reg","MAT2B--RARS","ENSG00000038274","ENSG00000113643",3.0,2.0,1.0,1.0,0.874,0.0]
["TCGA_BLCA","TCGA-DK-A3IV-01A","15:PCLAF:64376743:-:15:MTFMT:65021616:-:rev","PCLAF--MTFMT","ENSG00000259316","ENSG00000103707",2.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_BLCA","TCGA-DK-A3WX-01A","14:MMP14:22843418:+:14:TRAC:22549638:+:rev","MMP14--TRAC","ENSG00000157227","ENSG00000277734",2.0,1.0,1.0,1.0,0.594,"NA"]
["TCGA_BLCA","TCGA-DK-A3WY-01A","6:DTNBP1:15615267:-:6:AL022068.1:19325798:-:rev","DTNBP1--AL022068.1","ENSG00000047579","ENSG00000228412",4.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177160871:-:3:LINC00578:177539395:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",6.0,1.0,1.0,1.0,0.868,0.00574712643678]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177197121:-:3:LINC00578:177539395:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",8.0,1.0,1.0,1.0,0.858,0.00574712643678]
["TCGA_BLCA","TCGA-DK-A3X2-01A","3:TBL1XR1:177197121:-:3:LINC00578:177629417:+:strandcross","TBL1XR1--LINC00578","ENSG00000177565","ENSG00000228221",4.0,1.0,1.0,1.0,0.751,0.00862068965517]
["TCGA_BLCA","TCGA-DK-A3X2-01A","11:CD44:35201787:+:11:PDHX:34931404:+:rev","CD44--PDHX","ENSG00000026508","ENSG00000110435",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-DK-A6AV-01A","19:CLPP:6364639:+:18:AP000919.2:2960618:+:fusion","CLPP--AP000919.2","ENSG00000125656","ENSG00000265907",3.0,1.0,1.0,1.0,0.614,0.00881057268722]
["TCGA_BLCA","TCGA-DK-A6AV-01A","17:LINC00511:72592203:-:17:SDK2:73338940:-:rev","LINC00511--SDK2","ENSG00000227036","ENSG00000069188",3.0,1.0,1.0,1.0,0.832,"NA"]
["TCGA_BLCA","TCGA-DK-A6B1-01A","16:GSPT1:11891062:-:16:RBFOX1:7328648:+:strandcross","GSPT1--RBFOX1","ENSG00000103342","ENSG00000078328",5.0,1.0,1.0,1.0,0.896,0.0]
["TCGA_BLCA","TCGA-DK-A6B1-01A","13:ZDHHC20:21459054:-:13:MICU2:21514418:-:rev","ZDHHC20--MICU2","ENSG00000180776","ENSG00000165487",1.0,1.0,1.0,1.0,0.951,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:POGZ:151442081:-:16:LINC01566:35379969:+:fusion","POGZ--LINC01566","ENSG00000143442","ENSG00000259841",4.0,1.0,1.0,1.0,0.385,0.0128205128205]
["TCGA_BLCA","TCGA-DK-A6B2-01A","1:POGZ:151442081:-:16:LINC01566:35385879:+:fusion","POGZ--LINC01566","ENSG00000143442","ENSG00000259841",8.0,1.0,1.0,1.0,0.416,0.010989010989]
["TCGA_BLCA","TCGA-DK-A6B2-01A","10:NCOA4:46030526:-:10:MSMB:46040091:-:rev","NCOA4--MSMB","ENSG00000266412","ENSG00000263639",29.0,1.0,2.0,1.0,0.901419820635411,"NA"]
["TCGA_BLCA","TCGA-DK-A6B2-01A","9:NUP188:128947751:+:9:LRRC8A:128916096:+:rev","NUP188--LRRC8A","ENSG00000095319","ENSG00000136802",1.0,1.0,1.0,1.0,0.893,"NA"]
["TCGA_BLCA","TCGA-DK-A6B5-01A","18:RTTN:70134473:-:21:AP000470.1:24155729:-:fusion","RTTN--AP000470.1","ENSG00000176225","ENSG00000224018",3.0,1.0,1.0,1.0,0.225,0.0218253968254]
["TCGA_BLCA","TCGA-DK-A6B5-01A","6:ATG5:106248150:-:5:AC091860.2:51455115:+:fusion","ATG5--AC091860.2","ENSG00000057663","ENSG00000251125",16.0,1.0,1.0,1.0,0.195675815574623,0.0238095238095]
["TCGA_BLCA","TCGA-DK-A6B5-01A","6:SNX14:85593579:-:5:AC008869.1:37939669:-:fusion","SNX14--AC008869.1","ENSG00000135317","ENSG00000250032",20.0,1.0,1.0,1.0,0.825961646254866,0.00595238095238]
["TCGA_BLCA","TCGA-DK-AA6L-01A","8:PLPBP:37766355:+:1:ENO1:8865482:-:fusion","PLPBP--ENO1","ENSG00000147471","ENSG00000074800",3.0,5.0,3.0,2.0,0.638,0.0]
["TCGA_BLCA","TCGA-DK-AA6P-01A","12:CLSTN3:7130712:+:12:PIK3C2G:18420941:+:reg","CLSTN3--PIK3C2G","ENSG00000139182","ENSG00000139144",3.0,1.0,1.0,1.0,0.92,0.013698630137]
["TCGA_BLCA","TCGA-DK-AA6P-01A","12:CPSF6:69262562:+:1:FAM78B:166060663:-:fusion","CPSF6--FAM78B","ENSG00000111605","ENSG00000188859",2.0,1.0,1.0,1.0,0.636,0.013698630137]
["TCGA_BLCA","TCGA-DK-AA6P-01A","6:HIVEP2:142945944:-:6:PTPRK:128089992:-:reg","HIVEP2--PTPRK","ENSG00000010818","ENSG00000152894",2.0,1.0,1.0,1.0,0.848,0.013698630137]
["TCGA_BLCA","TCGA-DK-AA6P-01A","6:L3MBTL3:130104575:+:6:EYA4:133382392:+:reg","L3MBTL3--EYA4","ENSG00000198945","ENSG00000112319",5.0,1.0,1.0,1.0,0.829,0.013698630137]
["TCGA_BLCA","TCGA-DK-AA6Q-01A","8:GRHL2:101577519:+:8:AP001330.1:101293245:+:rev","GRHL2--AP001330.1","ENSG00000083307","ENSG00000253282",2.0,1.0,1.0,1.0,0.43,"NA"]
["TCGA_BLCA","TCGA-DK-AA6S-01A","6:ADGRF1:47021958:-:6:TNFRSF21:47286595:-:rev","ADGRF1--TNFRSF21","ENSG00000153292","ENSG00000146072",79.0,1.0,1.0,1.0,0.988928910498544,"NA"]
["TCGA_BLCA","TCGA-DK-AA6S-01A","6:DHX16:30662627:-:6:LINC00243:30798772:-:rev","DHX16--LINC00243","ENSG00000204560","ENSG00000214894",21.0,1.0,1.0,1.0,0.824365702539449,"NA"]
["TCGA_BLCA","TCGA-DK-AA6U-01A","1:CHTOP:153634343:+:14:PTGDR:52274731:+:fusion","CHTOP--PTGDR","ENSG00000160679","ENSG00000168229",4.0,1.0,1.0,1.0,0.175,0.0297872340426]
["TCGA_BLCA","TCGA-DK-AA6U-01A","2:ROCK2:11286539:-:2:AC013460.1:7445880:+:strandcross","ROCK2--AC013460.1","ENSG00000134318","ENSG00000229727",2.0,1.0,1.0,1.0,0.811,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","2:UBE2F-SCLY:238032254:+:2:LINC01934:181322661:+:rev","UBE2F-SCLY--LINC01934","ENSG00000184182","ENSG00000234663",2.0,1.0,1.0,1.0,0.797,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:CDKAL1:20535394:+:12:AC022081.1:28822273:-:fusion","CDKAL1--AC022081.1","ENSG00000145996","ENSG00000256513",3.0,1.0,1.0,1.0,0.157,0.0425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:ZFAND3:37820016:+:19:AC006504.5:27900789:+:fusion","ZFAND3--AC006504.5","ENSG00000156639","ENSG00000267575",4.0,1.0,1.0,1.0,0.892,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","6:ZFAND3:37929999:+:19:URI1:29985223:+:fusion","ZFAND3--URI1","ENSG00000156639","ENSG00000105176",2.0,1.0,1.0,1.0,0.692,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47291137:+:1:AL390729.1:112877730:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",7.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47294030:+:1:AL390729.1:112876940:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",7.0,1.0,1.0,1.0,0.734,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA6U-01A","8:SPIDR:47294030:+:1:AL390729.1:112877730:+:fusion","SPIDR--AL390729.1","ENSG00000164808","ENSG00000224167",21.0,1.0,1.0,1.0,0.886204930407888,0.00425531914894]
["TCGA_BLCA","TCGA-DK-AA75-01A","16:SNX29:12199683:+:16:U91319.1:13474210:+:reg","SNX29--U91319.1","ENSG00000048471","ENSG00000262801",9.0,1.0,1.0,1.0,0.98,0.00480769230769]
["TCGA_BLCA","TCGA-DK-AA75-01A","11:ELF5:34505629:-:11:AL137224.1:34544868:-:rev","ELF5--AL137224.1","ENSG00000135374","ENSG00000255271",2.0,1.0,1.0,1.0,0.598,"NA"]
["TCGA_BLCA","TCGA-DK-AA75-01A","13:RAB20:110561348:-:13:CARS2:110647239:-:rev","RAB20--CARS2","ENSG00000139832","ENSG00000134905",1.0,1.0,2.0,1.0,0.957,"NA"]
["TCGA_BLCA","TCGA-DK-AA77-01A","2:RHOQ:46543812:+:2:AC106869.1:47192817:-:strandcross","RHOQ--AC106869.1","ENSG00000119729","ENSG00000234690",12.0,1.0,1.0,1.0,0.469,0.00719424460432]
["TCGA_BLCA","TCGA-DK-AA77-01A","2:RHOQ:46543812:+:2:AC106869.1:47221323:-:strandcross","RHOQ--AC106869.1","ENSG00000119729","ENSG00000234690",11.0,1.0,1.0,1.0,0.439,0.00719424460432]
["TCGA_BLCA","TCGA-DK-AA77-01A","4:AP002026.1:99204427:+:4:CENPE:103111011:-:strandcross","AP002026.1--CENPE","ENSG00000246090","ENSG00000138778",4.0,1.0,1.0,1.0,0.691,0.00359712230216]
["TCGA_BLCA","TCGA-DK-AA77-01A","4:AP002026.1:99204431:+:4:CENPE:103111011:-:strandcross","AP002026.1--CENPE","ENSG00000246090","ENSG00000138778",5.0,1.0,1.0,1.0,0.582,0.00719424460432]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","1:POGZ:151440928:-:5:POC5:75694831:-:fusion","POGZ--POC5","ENSG00000143442","ENSG00000152359",3.0,1.0,1.0,1.0,0.889,0.0]
["TCGA_BLCA","TCGA-E5-A4TZ-01A","8:SAMD12:118580715:-:8:PKIA-AS1:78430948:-:reg","SAMD12--PKIA-AS1","ENSG00000177570","ENSG00000254266",1.0,1.0,1.0,1.0,0.756,0.00238095238095]
["TCGA_BLCA","TCGA-E5-A4U1-01A","11:RSF1:77820528:-:11:CPT1A:68815487:-:reg","RSF1--CPT1A","ENSG00000048649","ENSG00000110090",2.0,1.0,1.0,1.0,0.924,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","11:TENM4:79064738:-:11:AP003086.2:78443648:+:strandcross","TENM4--AP003086.2","ENSG00000149256","ENSG00000254420",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","18:DSG2:31524888:+:18:AC117569.1:29547995:+:rev","DSG2--AC117569.1","ENSG00000046604","ENSG00000264587",6.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BLCA","TCGA-E5-A4U1-01A","19:KHSRP:6415808:-:11:AP000439.1:69438853:-:fusion","KHSRP--AP000439.1","ENSG00000088247","ENSG00000255606",7.0,1.0,1.0,1.0,0.784,0.0]
["TCGA_BLCA","TCGA-E7-A3X6-01A","15:ALDH1A2:58331179:-:15:ADAM10:58665197:-:rev","ALDH1A2--ADAM10","ENSG00000128918","ENSG00000137845",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","6:PPP2R5D:42989688:+:6:AL035587.1:42943798:+:rev","PPP2R5D--AL035587.1","ENSG00000112640","ENSG00000231113",10.0,1.0,1.0,1.0,0.691,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","7:AC019117.1:17465170:-:7:SNX13:17803580:-:rev","AC019117.1--SNX13","ENSG00000236039","ENSG00000071189",2.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_BLCA","TCGA-E7-A4IJ-01A","7:RNF216:5781541:-:7:PMS2:5982991:-:rev","RNF216--PMS2","ENSG00000011275","ENSG00000122512",2.0,1.0,1.0,1.0,0.933,"NA"]
["TCGA_BLCA","TCGA-E7-A4XJ-01A","9:FUBP3:130579764:+:2:EIF4E2:232564247:+:fusion","FUBP3--EIF4E2","ENSG00000107164","ENSG00000135930",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BLCA","TCGA-E7-A519-01A","15:RPLP1:69453020:+:11:TNNI2:1840403:+:fusion","RPLP1--TNNI2","ENSG00000137818","ENSG00000130598",2.0,1.0,1.0,1.0,0.617,0.0]
["TCGA_BLCA","TCGA-E7-A541-01A","2:UGGT1:128129179:+:2:AC009303.2:118012494:+:rev","UGGT1--AC009303.2","ENSG00000136731","ENSG00000235066",9.0,1.0,1.0,1.0,0.438,0.0121065375303]
["TCGA_BLCA","TCGA-E7-A541-01A","6:ARFGEF3:138313939:+:6:LINC01277:142967441:-:strandcross","ARFGEF3--LINC01277","ENSG00000112379","ENSG00000229017",4.0,1.0,1.0,1.0,0.602,0.00726392251816]
["TCGA_BLCA","TCGA-E7-A541-01A","6:HBS1L:135050582:-:2:GPAT2:96032419:-:fusion","HBS1L--GPAT2","ENSG00000112339","ENSG00000186281",6.0,1.0,1.0,1.0,0.893,0.00242130750605]
["TCGA_BLCA","TCGA-E7-A5KE-01A","7:CYTH3:6272474:-:7:KDELR2:6466323:-:rev","CYTH3--KDELR2","ENSG00000008256","ENSG00000136240",4.0,1.0,1.0,1.0,0.979,"NA"]
["TCGA_BLCA","TCGA-E7-A5KE-01A","7:IGFBP3:45920738:-:7:AC004870.4:46890780:-:rev","IGFBP3--AC004870.4","ENSG00000146674","ENSG00000232072",22.0,1.0,1.0,1.0,0.557288967379308,"NA"]
["TCGA_BLCA","TCGA-E7-A6ME-01A","16:EEF2K:22251322:+:16:LCMT1-AS1:25085772:-:strandcross","EEF2K--LCMT1-AS1","ENSG00000103319","ENSG00000260448",5.0,1.0,1.0,1.0,0.227,0.0229226361032]
["TCGA_BLCA","TCGA-E7-A7DV-01A","12:TMEM117:43844928:+:12:STAT2:56356578:-:strandcross","TMEM117--STAT2","ENSG00000139173","ENSG00000170581",1.0,1.0,1.0,1.0,0.685,0.00314465408805]
["TCGA_BLCA","TCGA-E7-A7DV-01A","9:ZCCHC7:37126942:+:9:PTPDC1:94064734:+:reg","ZCCHC7--PTPDC1","ENSG00000147905","ENSG00000158079",4.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:CPSF6:69239706:+:6:CDKAL1:20846075:+:fusion","CPSF6--CDKAL1","ENSG00000111605","ENSG00000145996",2.0,1.0,1.0,1.0,0.711,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:FRS2:69532056:+:6:AL512380.2:21539024:-:fusion","FRS2--AL512380.2","ENSG00000166225","ENSG00000283480",7.0,1.0,1.0,1.0,0.531,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","12:FRS2:69537983:+:6:AL512380.2:21539024:-:fusion","FRS2--AL512380.2","ENSG00000166225","ENSG00000283480",4.0,1.0,1.0,1.0,0.749,0.0]
["TCGA_BLCA","TCGA-E7-A7PW-01A","6:CDKAL1:20548705:+:6:AL158198.1:20317551:+:rev","CDKAL1--AL158198.1","ENSG00000145996","ENSG00000227803",75.0,1.0,1.0,1.0,0.957678437815875,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","13:LRCH1:46669156:+:13:LINC01034:76013156:-:strandcross","LRCH1--LINC01034","ENSG00000136141","ENSG00000224933",10.0,1.0,1.0,1.0,0.709,0.00787401574803]
["TCGA_BLCA","TCGA-E7-A85H-01A","12:FRS2:69470530:+:12:LINC02373:69459517:+:rev","FRS2--LINC02373","ENSG00000166225","ENSG00000257507",5.0,2.0,1.0,1.0,0.709,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","5:ANXA6:151103570:-:5:ATOX1:151742959:-:rev","ANXA6--ATOX1","ENSG00000197043","ENSG00000177556",2.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_BLCA","TCGA-E7-A85H-01A","5:PLPP1:55534572:-:5:SLC38A9:55697992:-:rev","PLPP1--SLC38A9","ENSG00000067113","ENSG00000177058",4.0,2.0,3.0,2.0,0.859,"NA"]
["TCGA_BLCA","TCGA-E7-A8O7-01A","13:DLEU2:50125302:-:13:DIAPH3-AS1:60020921:+:strandcross","DLEU2--DIAPH3-AS1","ENSG00000231607","ENSG00000227528",21.0,1.0,1.0,1.0,0.880594544641553,0.00531914893617]
["TCGA_BLCA","TCGA-E7-A97Q-01A","17:NUP85:75213119:+:1:AL353708.2:179926896:-:fusion","NUP85--AL353708.2","ENSG00000125450","ENSG00000261831",7.0,1.0,1.0,1.0,0.599,0.0134529147982]
["TCGA_BLCA","TCGA-E7-A97Q-01A","19:ZNF586:57769878:+:19:AC010326.2:57889008:-:strandcross","ZNF586--AC010326.2","ENSG00000083828","ENSG00000269476",4.0,1.0,1.0,1.0,0.867,0.00896860986547]
["TCGA_BLCA","TCGA-E7-A97Q-01A","2:LIMS1:108534594:+:2:AC017002.2:111611902:+:reg","LIMS1--AC017002.2","ENSG00000169756","ENSG00000225744",14.0,1.0,1.0,1.0,0.464,0.0179372197309]
["TCGA_BLCA","TCGA-E7-A97Q-01A","6:LRRC1:53842227:+:6:AL033397.2:53506154:+:rev","LRRC1--AL033397.2","ENSG00000137269","ENSG00000249379",3.0,1.0,1.0,1.0,0.571,"NA"]
["TCGA_BLCA","TCGA-FD-A3B3-01A","8:NRG1:32616885:+:8:AC100818.1:35944244:+:reg","NRG1--AC100818.1","ENSG00000157168","ENSG00000253452",3.0,1.0,1.0,1.0,0.215,0.0302571860817]
["TCGA_BLCA","TCGA-FD-A3B3-01A","8:NRG1:32616885:+:8:AC100818.1:35970613:+:reg","NRG1--AC100818.1","ENSG00000157168","ENSG00000253452",4.0,1.0,1.0,1.0,0.954,0.00151285930408]
["TCGA_BLCA","TCGA-FD-A3B5-01A","11:UNC93B1:68003022:-:X:GTPBP6:315020:-:fusion","UNC93B1--GTPBP6","ENSG00000110057","ENSG00000178605",10.0,1.0,1.0,1.0,0.616,0.00831600831601]
["TCGA_BLCA","TCGA-FD-A3B6-01A","16:IQCK:19730494:+:16:C16orf62:19700378:+:rev","IQCK--C16orf62","ENSG00000174628","ENSG00000103544",2.0,1.0,1.0,1.0,0.785,"NA"]
["TCGA_BLCA","TCGA-FD-A3B7-01A","1:NBPF19:149390922:+:1:CTSS:150752008:-:strandcross","NBPF19--CTSS","ENSG00000271383","ENSG00000163131",2.0,1.0,1.0,1.0,0.902,0.0]
["TCGA_BLCA","TCGA-FD-A3B7-01A","3:TRAK1:42125614:+:3:CTNNB1:41224021:+:rev","TRAK1--CTNNB1","ENSG00000182606","ENSG00000168036",1.0,2.0,3.0,2.0,0.919,"NA"]
["TCGA_BLCA","TCGA-FD-A3B8-01A","3:SEC61A1:128060661:+:5:CCT5:10254674:+:fusion","SEC61A1--CCT5","ENSG00000058262","ENSG00000150753",5.0,1.0,1.0,1.0,0.98,0.0]
["TCGA_BLCA","TCGA-FD-A3N5-01A","7:EGFR:55019365:+:6:AARS2:44312263:-:fusion","EGFR--AARS2","ENSG00000146648","ENSG00000124608",4.0,1.0,1.0,1.0,0.492,0.00879120879121]
["TCGA_BLCA","TCGA-FD-A3N5-01A","7:EXOC4:133817544:+:7:AC078845.1:136242150:+:reg","EXOC4--AC078845.1","ENSG00000131558","ENSG00000232053",9.0,1.0,1.0,1.0,0.672,0.0043956043956]
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["TCGA_BLCA","TCGA-FD-A3NA-01A","10:FBXL15:102422292:+:10:GBF1:102369211:+:rev","FBXL15--GBF1","ENSG00000107872","ENSG00000107862",2.0,1.0,1.0,1.0,0.714,"NA"]
["TCGA_BLCA","TCGA-FD-A3NA-01A","17:HEATR6:60055515:-:17:AC025048.1:60136227:-:rev","HEATR6--AC025048.1","ENSG00000068097","ENSG00000267095",3.0,1.0,1.0,1.0,0.692,"NA"]
["TCGA_BLCA","TCGA-FD-A3NA-01A","8:RNF19A:100309867:-:8:AP003472.1:100381771:-:rev","RNF19A--AP003472.1","ENSG00000034677","ENSG00000253824",22.0,3.0,3.0,3.0,0.64693192076907,"NA"]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","12:AC008014.1:46387972:+:7:AC073486.1:125461481:+:fusion","AC008014.1--AC073486.1","ENSG00000257261","ENSG00000227869",2.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","17:MLLT6:38712014:+:17:AC243585.1:37650555:+:rev","MLLT6--AC243585.1","ENSG00000275023","ENSG00000274244",11.0,1.0,1.0,1.0,0.769,0.00242718446602]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","19:ZNF331:53539282:+:19:ZNF793:37520184:+:rev","ZNF331--ZNF793","ENSG00000130844","ENSG00000188227",5.0,1.0,1.0,1.0,0.364,0.00485436893204]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","4:FBXW7:152534941:-:6:AL023655.1:18535848:+:fusion","FBXW7--AL023655.1","ENSG00000109670","ENSG00000283408",6.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","5:PFDN1:140281449:-:6:LINC00581:21486529:-:fusion","PFDN1--LINC00581","ENSG00000113068","ENSG00000280989",3.0,1.0,1.0,1.0,0.367,0.00485436893204]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","5:PFDN1:140281449:-:6:LINC00581:21502511:-:fusion","PFDN1--LINC00581","ENSG00000113068","ENSG00000280989",2.0,1.0,1.0,1.0,0.222,0.00970873786408]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","8:ATP6V1C1:103042407:+:8:AC117834.1:92921416:+:rev","ATP6V1C1--AC117834.1","ENSG00000155097","ENSG00000253197",5.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BLCA","TCGA-FD-A3SJ-01A","X:BX276092.9:71701043:+:X:OGT:71573620:+:rev","BX276092.9--OGT","ENSG00000281852","ENSG00000147162",2.0,1.0,1.0,1.0,0.45,"NA"]
["TCGA_BLCA","TCGA-FD-A3SL-01A","4:FAT1:186706563:-:4:EPHA5-AS1:65693109:+:strandcross","FAT1--EPHA5-AS1","ENSG00000083857","ENSG00000250846",4.0,1.0,1.0,1.0,0.246,0.00854700854701]
["TCGA_BLCA","TCGA-FD-A3SN-01A","22:LINC01399:35230998:-:22:RBFOX2:35938897:-:rev","LINC01399--RBFOX2","ENSG00000233080","ENSG00000100320",1.0,1.0,1.0,1.0,0.805,"NA"]
["TCGA_BLCA","TCGA-FD-A3SP-01A","4:LARP7:112654159:+:4:AC110800.1:93318875:-:strandcross","LARP7--AC110800.1","ENSG00000174720","ENSG00000250908",7.0,1.0,1.0,1.0,0.426,0.012987012987]
["TCGA_BLCA","TCGA-FD-A3SP-01A","8:RIMS2:103942926:+:8:UBR5:102265278:-:strandcross","RIMS2--UBR5","ENSG00000176406","ENSG00000104517",4.0,1.0,1.0,1.0,0.337,0.0207792207792]
["TCGA_BLCA","TCGA-FD-A3SR-01A","19:AC092279.1:24049548:+:19:NANOS3:13880442:+:rev","AC092279.1--NANOS3","ENSG00000268362","ENSG00000187556",4.0,1.0,1.0,1.0,0.587,0.00277008310249]
["TCGA_BLCA","TCGA-FD-A3SR-01A","4:NELFA:2008750:-:8:AF279873.3:34034886:+:fusion","NELFA--AF279873.3","ENSG00000185049","ENSG00000253642",34.0,1.0,1.0,1.0,0.204845069500608,0.01108033241]
["TCGA_BLCA","TCGA-FD-A3SR-01A","7:EGFR:55019365:+:1:AL355482.2:182089365:+:fusion","EGFR--AL355482.2","ENSG00000146648","ENSG00000225982",5.0,1.0,1.0,1.0,0.9,0.0]
["TCGA_BLCA","TCGA-FD-A3SS-01A","2:GPN1:27629952:+:2:AC079610.1:213278531:-:strandcross","GPN1--AC079610.1","ENSG00000259080","ENSG00000196096",27.0,1.0,1.0,1.0,0.687380079697357,0.00662251655629]
["TCGA_BLCA","TCGA-FD-A3SS-01A","2:GPN1:27629952:+:2:AC079610.3:213267060:-:strandcross","GPN1--AC079610.3","ENSG00000259080","ENSG00000272519",7.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BLCA","TCGA-FD-A43N-01A","4:WDFY3:84735043:-:10:LINC00707:6781304:+:fusion","WDFY3--LINC00707","ENSG00000163625","ENSG00000238266",3.0,1.0,1.0,1.0,0.37,0.0128205128205]
["TCGA_BLCA","TCGA-FD-A43P-01A","11:AP000873.2:83191055:-:17:HELZ:67124014:-:fusion","AP000873.2--HELZ","ENSG00000247137","ENSG00000198265",3.0,1.0,1.0,1.0,0.895,0.001287001287]
["TCGA_BLCA","TCGA-FD-A43P-01A","17:NF1:31265339:+:19:LINC01837:31910613:-:fusion","NF1--LINC01837","ENSG00000196712","ENSG00000267489",8.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_BLCA","TCGA-FD-A43X-01A","21:AP001628.1:42836448:-:21:RUNX1:35864467:-:reg","AP001628.1--RUNX1","ENSG00000225218","ENSG00000159216",15.0,1.0,1.0,1.0,0.452,0.0109170305677]
["TCGA_BLCA","TCGA-FD-A43Y-01A","10:TNKS2:91798889:+:1:AL121987.2:160202516:-:fusion","TNKS2--AL121987.2","ENSG00000107854","ENSG00000227741",5.0,1.0,1.0,1.0,0.743,0.00198412698413]
["TCGA_BLCA","TCGA-FD-A5BT-01A","2:FN1:215382212:-:6:TARID:133506270:-:fusion","FN1--TARID","ENSG00000115414","ENSG00000227954",40.0,1.0,1.0,1.0,0.909048477608504,0.00166666666667]
["TCGA_BLCA","TCGA-FD-A5BT-01A","2:FN1:215382212:-:6:TARID:133507321:-:fusion","FN1--TARID","ENSG00000115414","ENSG00000227954",32.0,1.0,1.0,1.0,0.538985924438037,0.00333333333333]
["TCGA_BLCA","TCGA-FD-A5BU-01A","1:BSDC1:32386779:-:16:AC099313.1:80738661:+:fusion","BSDC1--AC099313.1","ENSG00000160058","ENSG00000260594",2.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BLCA","TCGA-FD-A5BU-01A","19:CIRBP:1269410:+:19:PTBP1:803561:+:rev","CIRBP--PTBP1","ENSG00000099622","ENSG00000011304",1.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BLCA","TCGA-FD-A5BY-01A","2:FN1:215382212:-:4:HNRNPDL:82424883:-:fusion","FN1--HNRNPDL","ENSG00000115414","ENSG00000152795",3.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_BLCA","TCGA-FD-A5BY-01A","19:SPPL2B:2328775:+:19:MUM1:1369265:+:rev","SPPL2B--MUM1","ENSG00000005206","ENSG00000160953",1.0,1.0,1.0,1.0,0.89,"NA"]
["TCGA_BLCA","TCGA-FD-A5BZ-01A","1:PFDN2:161117952:-:1:DEDD:161124526:-:rev","PFDN2--DEDD","ENSG00000143256","ENSG00000158796",31.0,2.0,1.0,1.0,0.912472939436702,"NA"]
["TCGA_BLCA","TCGA-FD-A5C0-01A","21:DIP2A:46484828:+:16:AC092718.3:81063993:-:fusion","DIP2A--AC092718.3","ENSG00000160305","ENSG00000166455",8.0,1.0,1.0,1.0,0.928,0.00367647058824]
["TCGA_BLCA","TCGA-FD-A5C0-01A","4:CCSER1:90127831:+:4:AC097478.1:89587821:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",8.0,5.0,5.0,5.0,0.98,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","19:TOMM40:44894066:+:19:BCAM:44811225:+:rev","TOMM40--BCAM","ENSG00000130204","ENSG00000187244",2.0,1.0,1.0,1.0,0.782,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","1:EYA3:28057994:-:1:DNAJC8:28229023:-:rev","EYA3--DNAJC8","ENSG00000158161","ENSG00000126698",1.0,1.0,1.0,1.0,0.829,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","4:HOPX:56681255:-:4:SPINK2:56820579:-:rev","HOPX--SPINK2","ENSG00000171476","ENSG00000128040",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_BLCA","TCGA-FD-A62P-01A","6:ADGRF1:47016617:-:6:TNFRSF21:47253521:-:rev","ADGRF1--TNFRSF21","ENSG00000153292","ENSG00000146072",4.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_BLCA","TCGA-FD-A6TA-01A","8:ZFPM2-AS1:105927651:-:6:SYNE1:152149668:-:fusion","ZFPM2-AS1--SYNE1","ENSG00000251003","ENSG00000131018",3.0,1.0,1.0,1.0,0.901,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","12:MIR200CHG:6963348:+:12:AC024940.1:31114927:-:strandcross","MIR200CHG--AC024940.1","ENSG00000257084","ENSG00000177359",207.0,1.0,1.0,1.0,0.765629373653969,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","1:CDC42BPA:227317005:-:16:AC027279.2:78996202:+:fusion","CDC42BPA--AC027279.2","ENSG00000143776","ENSG00000261537",2.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","20:COMMD7:32704023:-:19:KF456478.1:3121452:-:fusion","COMMD7--KF456478.1","ENSG00000149600","ENSG00000267688",3.0,2.0,2.0,1.0,0.742,0.0]
["TCGA_BLCA","TCGA-FD-A6TC-01A","21:AP003900.1:10342616:-:13:POLR1D:27665686:+:fusion","AP003900.1--POLR1D","ENSG00000277693","ENSG00000186184",15.0,1.0,1.0,1.0,0.601,0.00207468879668]
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["TCGA_BLCA","TCGA-FD-A6TD-01A","12:SCNN1A:6374368:-:12:CD27-AS1:6447087:-:rev","SCNN1A--CD27-AS1","ENSG00000111319","ENSG00000215039",6.0,1.0,1.0,1.0,0.949,"NA"]
["TCGA_BLCA","TCGA-FD-A6TD-01A","12:SCNN1A:6374368:-:12:CD27-AS1:6448150:-:rev","SCNN1A--CD27-AS1","ENSG00000111319","ENSG00000215039",15.0,1.0,1.0,1.0,0.769,"NA"]
["TCGA_BLCA","TCGA-FD-A6TG-01A","19:SAMD4B:39342576:+:19:HKR1:37316995:+:rev","SAMD4B--HKR1","ENSG00000179134","ENSG00000181666",2.0,1.0,1.0,1.0,0.279,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","3:ZNF148:125331158:-:17:AC099850.1:59117924:+:fusion","ZNF148--AC099850.1","ENSG00000163848","ENSG00000224738",7.0,1.0,1.0,1.0,0.294,0.016]
["TCGA_BLCA","TCGA-FD-A6TG-01A","6:GFOD1:13486638:-:6:LINC00240:27023254:+:strandcross","GFOD1--LINC00240","ENSG00000145990","ENSG00000224843",7.0,1.0,1.0,1.0,0.878,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","X:OPHN1:68432867:-:1:LINC01720:190799801:+:fusion","OPHN1--LINC01720","ENSG00000079482","ENSG00000231175",3.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_BLCA","TCGA-FD-A6TG-01A","5:PLPP1:55534572:-:5:SLC38A9:55697992:-:rev","PLPP1--SLC38A9","ENSG00000067113","ENSG00000177058",8.0,2.0,3.0,2.0,0.617,"NA"]
["TCGA_BLCA","TCGA-FD-A6TK-01A","16:CLEC16A:11061022:+:16:MMP25-AS1:3055945:-:strandcross","CLEC16A--MMP25-AS1","ENSG00000038532","ENSG00000261971",2.0,1.0,1.0,1.0,0.532,0.00386847195358]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","19:RPS19:41861212:+:1:AL355860.1:150912242:+:fusion","RPS19--AL355860.1","ENSG00000105372","ENSG00000283324",383.0,1.0,1.0,1.0,0.999861325916124,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","1:NOTCH2:119926499:-:1:KYAT3:88949277:-:reg","NOTCH2--KYAT3","ENSG00000134250","ENSG00000137944",2.0,1.0,1.0,1.0,0.982,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3Z7-01A","6:PDSS2:107334198:-:6:ATG5:106293106:-:reg","PDSS2--ATG5","ENSG00000164494","ENSG00000057663",3.0,1.0,1.0,1.0,0.998,0.00276243093923]
["TCGA_BLCA","TCGA-FJ-A3ZF-01A","17:TAOK1:29491865:+:17:AC061975.4:28264862:+:rev","TAOK1--AC061975.4","ENSG00000160551","ENSG00000264486",19.0,1.0,1.0,1.0,0.607803950579656,0.00632911392405]
["TCGA_BLCA","TCGA-FJ-A871-01A","19:CALR:12940887:+:19:FARSA-AS1:12933149:+:rev","CALR--FARSA-AS1","ENSG00000179218","ENSG00000266975",11.0,2.0,4.0,2.0,0.908,"NA"]
["TCGA_BLCA","TCGA-FT-A61P-01A","8:PLPBP:37766355:+:1:ENO1:8865482:-:fusion","PLPBP--ENO1","ENSG00000147471","ENSG00000074800",3.0,5.0,3.0,2.0,0.942,0.0]
["TCGA_BLCA","TCGA-G2-A2EF-01A","8:PVT1:127890998:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",4.0,3.0,1.0,1.0,0.568,"NA"]
["TCGA_BLCA","TCGA-G2-A2EK-01A","12:CPSF6:69262562:+:22:DDX17:38501280:-:fusion","CPSF6--DDX17","ENSG00000111605","ENSG00000100201",1.0,1.0,1.0,1.0,0.808,0.0093023255814]
["TCGA_BLCA","TCGA-G2-A2EK-01A","4:CCSER1:90127831:+:4:AC097478.1:89587821:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",3.0,5.0,5.0,5.0,0.69,"NA"]
["TCGA_BLCA","TCGA-G2-A2EL-01A","12:AC084816.1:22787720:+:12:ETNK1:22684483:+:rev","AC084816.1--ETNK1","ENSG00000256995","ENSG00000139163",2.0,1.0,1.0,1.0,0.98,"NA"]
["TCGA_BLCA","TCGA-G2-A2EO-01A","17:TAOK1:29522519:+:8:AC060765.1:82564215:-:fusion","TAOK1--AC060765.1","ENSG00000160551","ENSG00000253503",41.0,1.0,1.0,1.0,0.864043103899318,0.0036231884058]
["TCGA_BLCA","TCGA-G2-A2EO-01A","3:SETD2:47163854:-:7:BAIAP2L1:98304376:-:fusion","SETD2--BAIAP2L1","ENSG00000181555","ENSG00000006453",1.0,1.0,1.0,1.0,0.935,0.0018115942029]
["TCGA_BLCA","TCGA-G2-A2ES-01A","12:HMGA2:65828087:+:12:MSRB3:65463155:+:rev","HMGA2--MSRB3","ENSG00000149948","ENSG00000174099",148.0,1.0,1.0,1.0,0.994866621333119,"NA"]
["TCGA_BLCA","TCGA-G2-A3IB-01A","5:ARSI:150302063:-:5:RPS14:150446963:-:rev","ARSI--RPS14","ENSG00000183876","ENSG00000164587",1.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_BLCA","TCGA-G2-A3IB-01A","X:XG:2752335:+:X:CD99:2738203:+:rev","XG--CD99","ENSG00000124343","ENSG00000002586",2.0,1.0,1.0,1.0,0.976,"NA"]
["TCGA_BLCA","TCGA-G2-A3VY-01A","16:RAB40C:617268:+:16:AC009119.1:83790204:-:strandcross","RAB40C--AC009119.1","ENSG00000197562","ENSG00000260228",9.0,1.0,1.0,1.0,0.494,0.00696055684455]
["TCGA_BLCA","TCGA-G2-A3VY-01A","16:RAB40C:618260:+:16:AC009119.1:83790204:-:strandcross","RAB40C--AC009119.1","ENSG00000197562","ENSG00000260228",39.0,1.0,1.0,1.0,0.934454039173437,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","2:TANC1:159065971:+:2:XIRP2-AS1:167124525:-:strandcross","TANC1--XIRP2-AS1","ENSG00000115183","ENSG00000254552",6.0,1.0,1.0,1.0,0.298,0.0139211136891]
["TCGA_BLCA","TCGA-G2-A3VY-01A","6:LYRM4:5216618:-:6:AL138737.1:140086682:+:strandcross","LYRM4--AL138737.1","ENSG00000214113","ENSG00000236013",6.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_BLCA","TCGA-G2-A3VY-01A","6:LYRM4:5216618:-:6:AL138737.1:140092991:+:strandcross","LYRM4--AL138737.1","ENSG00000214113","ENSG00000236013",4.0,1.0,1.0,1.0,0.866,0.00232018561485]
["TCGA_BLCA","TCGA-G2-A3VY-01A","8:ST3GAL1:133499135:-:8:AC022639.1:63857111:-:reg","ST3GAL1--AC022639.1","ENSG00000008513","ENSG00000253554",6.0,1.0,1.0,1.0,0.789,0.00232018561485]
["TCGA_BLCA","TCGA-G2-AA3B-01A","11:DEAF1:674536:-:11:PIDD1:804463:-:rev","DEAF1--PIDD1","ENSG00000177030","ENSG00000177595",2.0,2.0,2.0,1.0,0.702,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","15:CHD2:92985673:+:15:AC091544.2:92600338:+:rev","CHD2--AC091544.2","ENSG00000173575","ENSG00000258676",11.0,1.0,1.0,1.0,0.924,"NA"]
["TCGA_BLCA","TCGA-G2-AA3D-01A","7:HDAC9:18087213:+:7:AC019117.2:17466152:+:rev","HDAC9--AC019117.2","ENSG00000048052","ENSG00000283321",10.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:IKZF2:213147708:-:2:ERBB4:212124903:-:reg","IKZF2--ERBB4","ENSG00000030419","ENSG00000178568",4.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_BLCA","TCGA-G2-AA3F-01A","2:LIMS1:108534594:+:2:LINC01885:107385734:-:strandcross","LIMS1--LINC01885","ENSG00000169756","ENSG00000237880",2.0,1.0,1.0,1.0,0.619,0.00854700854701]
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["TCGA_BRCA","TCGA-A2-A0D1-01A","17:DDX52:37633288:-:17:ARL17A:46557630:-:rev","DDX52--ARL17A","ENSG00000278053","ENSG00000185829",62.0,1.0,1.0,1.0,0.714850693112186,0.0]
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["TCGA_BRCA","TCGA-A2-A0D4-01A","14:CNIH1:54441247:-:11:AP001107.9:66363269:+:fusion","CNIH1--AP001107.9","ENSG00000100528","ENSG00000255468",2.0,1.0,1.0,1.0,0.687,0.00552486187845]
["TCGA_BRCA","TCGA-A2-A0EN-01A","12:MGP:14885731:-:3:LTF:46446493:-:fusion","MGP--LTF","ENSG00000111341","ENSG00000012223",2.0,1.0,1.0,1.0,0.966,0.00285714285714]
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["TCGA_BRCA","TCGA-A2-A0EQ-01A","11:AP000487.1:70398098:-:7:AC099681.1:55587771:+:fusion","AP000487.1--AC099681.1","ENSG00000246889","ENSG00000223475",2.0,1.0,1.0,1.0,0.714,0.00291545189504]
["TCGA_BRCA","TCGA-A2-A0EQ-01A","11:CTTN:70398614:+:14:EMC9:24140965:-:fusion","CTTN--EMC9","ENSG00000085733","ENSG00000100908",2.0,1.0,1.0,1.0,0.629,0.00583090379009]
["TCGA_BRCA","TCGA-A2-A0EQ-01A","11:CTTN:70398614:+:14:EMC9:24141316:-:fusion","CTTN--EMC9","ENSG00000085733","ENSG00000100908",9.0,1.0,1.0,1.0,0.694,0.00291545189504]
["TCGA_BRCA","TCGA-A2-A0ES-01A","11:USP35:78200808:+:11:AP002498.1:76955585:-:strandcross","USP35--AP002498.1","ENSG00000118369","ENSG00000254988",3.0,1.0,1.0,1.0,0.786,0.00534759358289]
["TCGA_BRCA","TCGA-A2-A0EX-01A","1:KLHL12:202924968:-:1:ADIPOR1:202941701:-:rev","KLHL12--ADIPOR1","ENSG00000117153","ENSG00000159346",2.0,1.0,2.0,1.0,0.971,"NA"]
["TCGA_BRCA","TCGA-A2-A0EY-01A","19:PIP5K1C:3660966:-:17:AC005288.1:39405480:+:fusion","PIP5K1C--AC005288.1","ENSG00000186111","ENSG00000266469",201.0,1.0,1.0,1.0,0.992028507265349,0.0]
["TCGA_BRCA","TCGA-A2-A0SU-01A","15:AC091544.7:92699040:-:15:SEMA4B:90217439:+:strandcross","AC091544.7--SEMA4B","ENSG00000185442","ENSG00000185033",5.0,1.0,1.0,1.0,0.9,0.00578034682081]
["TCGA_BRCA","TCGA-A2-A0SU-01A","15:AGBL1:86159026:+:15:AC087482.1:66987647:-:strandcross","AGBL1--AC087482.1","ENSG00000273540","ENSG00000259347",5.0,1.0,1.0,1.0,0.953,0.0]
["TCGA_BRCA","TCGA-A2-A0SW-01A","5:BDP1:71553320:+:5:PPWD1:65585014:+:rev","BDP1--PPWD1","ENSG00000145734","ENSG00000113593",5.0,1.0,1.0,1.0,0.184,0.0287356321839]
["TCGA_BRCA","TCGA-A2-A0SX-01A","12:SLC38A2:46370776:-:12:AC008014.1:46874817:+:strandcross","SLC38A2--AC008014.1","ENSG00000134294","ENSG00000257261",4.0,1.0,1.0,1.0,0.811,0.0047619047619]
["TCGA_BRCA","TCGA-A2-A0SX-01A","12:SLC38A2:46370776:-:12:AC008035.1:46571256:+:strandcross","SLC38A2--AC008035.1","ENSG00000134294","ENSG00000272369",10.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_BRCA","TCGA-A2-A0SX-01A","12:SLC38A2:46370776:-:12:AC008035.1:46652390:+:strandcross","SLC38A2--AC008035.1","ENSG00000134294","ENSG00000272369",15.0,1.0,1.0,1.0,0.84,0.0047619047619]
["TCGA_BRCA","TCGA-A2-A0SX-01A","8:YWHAZ:100948596:-:8:BAALC-AS1:103157038:-:rev","YWHAZ--BAALC-AS1","ENSG00000164924","ENSG00000247081",3.0,1.0,1.0,1.0,0.981,0.00238095238095]
["TCGA_BRCA","TCGA-A2-A0T0-01A","6:PHIP:78982886:-:2:AC009971.1:49592988:+:fusion","PHIP--AC009971.1","ENSG00000146247","ENSG00000282828",15.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_BRCA","TCGA-A2-A0T1-01A","10:DLG5:77824384:-:12:AC123567.2:94168351:-:fusion","DLG5--AC123567.2","ENSG00000151208","ENSG00000258035",20.0,1.0,1.0,1.0,0.215299697570991,0.0377906976744]
["TCGA_BRCA","TCGA-A2-A0T1-01A","17:B3GNTL1:83035035:-:17:POLG2:64493021:-:reg","B3GNTL1--POLG2","ENSG00000175711","ENSG00000256525",4.0,1.0,1.0,1.0,0.936,0.00581395348837]
["TCGA_BRCA","TCGA-A2-A0T1-01A","17:METRNL:83085323:+:17:AC087491.1:39621844:+:rev","METRNL--AC087491.1","ENSG00000176845","ENSG00000214546",74.0,1.0,1.0,1.0,0.912874034445657,0.00581395348837]
["TCGA_BRCA","TCGA-A2-A0T1-01A","17:METRNL:83085323:+:17:AC087491.1:39622076:+:rev","METRNL--AC087491.1","ENSG00000176845","ENSG00000214546",3.0,1.0,1.0,1.0,0.969,0.00581395348837]
["TCGA_BRCA","TCGA-A2-A0T1-01A","17:PCYT2:81906464:-:17:ANAPC11:81899920:+:strandcross","PCYT2--ANAPC11","ENSG00000185813","ENSG00000141552",22.0,1.0,1.0,1.0,0.823577960831454,0.0]
["TCGA_BRCA","TCGA-A2-A0T1-01A","17:PCYT2:81907554:-:17:ANAPC11:81899920:+:strandcross","PCYT2--ANAPC11","ENSG00000185813","ENSG00000141552",4.0,1.0,1.0,1.0,0.949,0.0]
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["TCGA_BRCA","TCGA-A2-A0T1-01A","1:EIF4G3:21050866:-:1:USP48:21690099:-:rev","EIF4G3--USP48","ENSG00000075151","ENSG00000090686",2.0,1.0,1.0,1.0,0.913,"NA"]
["TCGA_BRCA","TCGA-A2-A0T2-01A","1:PTBP2:96804939:+:1:AC095033.1:95067044:+:rev","PTBP2--AC095033.1","ENSG00000117569","ENSG00000230427",3.0,1.0,1.0,1.0,0.871,0.00555555555556]
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["TCGA_BRCA","TCGA-A2-A0T3-01A","7:DOCK4:112206102:-:7:AC004917.1:106615771:-:reg","DOCK4--AC004917.1","ENSG00000128512","ENSG00000243797",2.0,1.0,1.0,1.0,0.662,0.029702970297]
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["TCGA_BRCA","TCGA-A2-A0T5-01A","7:CNOT4:135438158:-:15:TPM1:63056985:+:fusion","CNOT4--TPM1","ENSG00000080802","ENSG00000140416",1.0,1.0,1.0,1.0,0.844,0.0143540669856]
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["TCGA_BRCA","TCGA-A2-A0YC-01A","18:PIAS2:46815312:-:18:AC012254.2:47157537:-:rev","PIAS2--AC012254.2","ENSG00000078043","ENSG00000267228",2.0,1.0,1.0,1.0,0.686,"NA"]
["TCGA_BRCA","TCGA-A2-A0YD-01A","2:AC009948.1:178433475:+:17:AC005899.4:32358503:+:fusion","AC009948.1--AC005899.4","ENSG00000223960","ENSG00000265794",3.0,1.0,1.0,1.0,0.792,0.0157480314961]
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["TCGA_BRCA","TCGA-A2-A0YF-01A","19:ZNF552:57813294:-:10:ADK:74589282:+:fusion","ZNF552--ADK","ENSG00000178935","ENSG00000156110",1.0,1.0,1.0,1.0,0.779,0.0140186915888]
["TCGA_BRCA","TCGA-A2-A0YF-01A","7:PSMG3-AS1:1570533:+:7:RBM48:92532404:+:reg","PSMG3-AS1--RBM48","ENSG00000230487","ENSG00000127993",1.0,1.0,1.0,1.0,0.805,0.00934579439252]
["TCGA_BRCA","TCGA-A2-A0YF-01A","1:YY1AP1:155675010:-:1:KIAA0907:155929840:-:rev","YY1AP1--KIAA0907","ENSG00000163374","ENSG00000132680",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-A2-A0YG-01A","6:PTPRK:128397566:-:2:AC007388.1:39599366:+:fusion","PTPRK--AC007388.1","ENSG00000152894","ENSG00000231312",8.0,1.0,1.0,1.0,0.991,0.00319488817891]
["TCGA_BRCA","TCGA-A2-A0YH-01A","20:NAPB:23421305:-:20:AL158175.1:22744691:+:strandcross","NAPB--AL158175.1","ENSG00000125814","ENSG00000283072",16.0,1.0,1.0,1.0,0.454720330108644,0.015479876161]
["TCGA_BRCA","TCGA-A2-A0YI-01A","12:GNPTAB:101830559:-:12:WASHC3:102046119:-:rev","GNPTAB--WASHC3","ENSG00000111670","ENSG00000120860",2.0,2.0,2.0,2.0,0.879,"NA"]
["TCGA_BRCA","TCGA-A2-A0YL-01A","13:LINC00398:30803592:+:17:CA4:60155314:+:fusion","LINC00398--CA4","ENSG00000237879","ENSG00000167434",13.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-A2-A0YL-01A","17:SRP68:76060308:-:17:MAPT-AS1:45800790:-:reg","SRP68--MAPT-AS1","ENSG00000167881","ENSG00000264589",6.0,1.0,1.0,1.0,0.243,0.0379746835443]
["TCGA_BRCA","TCGA-A2-A0YL-01A","8:SLC25A32:103401941:-:8:RB1CC1:52645867:-:reg","SLC25A32--RB1CC1","ENSG00000164933","ENSG00000023287",1.0,1.0,1.0,1.0,0.929,0.0]
["TCGA_BRCA","TCGA-A2-A0YL-01A","6:TXNDC5:7899576:-:6:EEF1E1:8097467:-:rev","TXNDC5--EEF1E1","ENSG00000239264","ENSG00000265818",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-A2-A0YT-01A","1:FAM20B:179050365:+:1:RASAL2:178454447:+:rev","FAM20B--RASAL2","ENSG00000116199","ENSG00000075391",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-A2-A1FV-01A","8:PTP4A3:141392084:+:8:LY6L:143082425:+:reg","PTP4A3--LY6L","ENSG00000184489","ENSG00000261667",5.0,1.0,1.0,1.0,0.839,0.00462962962963]
["TCGA_BRCA","TCGA-A2-A1FW-01A","17:LRRC59:50392398:-:20:MCM8-AS1:6001397:-:fusion","LRRC59--MCM8-AS1","ENSG00000108829","ENSG00000278719",11.0,1.0,1.0,1.0,0.774,0.00681818181818]
["TCGA_BRCA","TCGA-A2-A1FW-01A","17:SPAG9:50974771:-:17:AC244093.5:37045968:-:reg","SPAG9--AC244093.5","ENSG00000008294","ENSG00000278638",4.0,1.0,1.0,1.0,0.95,0.00227272727273]
["TCGA_BRCA","TCGA-A2-A1FX-01A","11:RSF1:77740731:-:16:AC018558.1:35505414:-:fusion","RSF1--AC018558.1","ENSG00000048649","ENSG00000260857",68.0,1.0,1.0,1.0,0.927623106265137,0.0]
["TCGA_BRCA","TCGA-A2-A1FX-01A","19:SBNO2:1149369:-:19:TPGS1:518889:+:strandcross","SBNO2--TPGS1","ENSG00000064932","ENSG00000141933",2.0,3.0,4.0,3.0,0.993,0.0]
["TCGA_BRCA","TCGA-A2-A1G0-01A","19:PIK3R2:18153294:+:19:BORCS8-MEF2B:19150764:-:strandcross","PIK3R2--BORCS8-MEF2B","ENSG00000105647","ENSG00000064489",4.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-A2-A1G0-01A","19:PIK3R2:18153294:+:19:MEF2B:19150764:-:strandcross","PIK3R2--MEF2B","ENSG00000105647","ENSG00000064489",4.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-A2-A1G4-01A","11:AC004923.1:67955482:-:11:MYEOV:69341510:+:strandcross","AC004923.1--MYEOV","ENSG00000254610","ENSG00000172927",12.0,1.0,1.0,1.0,0.667,0.012987012987]
["TCGA_BRCA","TCGA-A2-A1G4-01A","11:HNRNPUL2-BSCL2:62723587:-:11:AP003774.4:64327536:-:rev","HNRNPUL2-BSCL2--AP003774.4","ENSG00000234857","ENSG00000236935",25.0,1.0,1.0,1.0,0.863663865806069,0.004329004329]
["TCGA_BRCA","TCGA-A2-A25B-01A","8:HGSNAT:43182260:+:8:LINC00293:46836742:+:reg","HGSNAT--LINC00293","ENSG00000165102","ENSG00000253314",3.0,1.0,1.0,1.0,0.912,0.0]
["TCGA_BRCA","TCGA-A2-A25E-01A","10:CNNM2:102920101:+:9:PTPA:129147387:+:fusion","CNNM2--PTPA","ENSG00000148842","ENSG00000119383",3.0,1.0,1.0,1.0,0.298,0.013986013986]
["TCGA_BRCA","TCGA-A2-A25E-01A","5:PHAX:126617333:+:5:CCDC192:127941182:+:reg","PHAX--CCDC192","ENSG00000164902","ENSG00000230561",4.0,1.0,1.0,1.0,0.353,0.013986013986]
["TCGA_BRCA","TCGA-A2-A3KC-01A","16:LINC00921:3263883:+:1:PHF13:6616757:+:fusion","LINC00921--PHF13","ENSG00000281005","ENSG00000116273",1.0,1.0,1.0,1.0,0.747,0.0112781954887]
["TCGA_BRCA","TCGA-A2-A3KC-01A","3:MAP4:47998638:-:3:KIF9-AS1:47236057:+:strandcross","MAP4--KIF9-AS1","ENSG00000047849","ENSG00000227398",14.0,1.0,1.0,1.0,0.972,0.00375939849624]
["TCGA_BRCA","TCGA-A2-A3XS-01A","11:PAFAH1B2:117144418:+:11:SIK3:116957064:-:strandcross","PAFAH1B2--SIK3","ENSG00000168092","ENSG00000160584",3.0,1.0,1.0,1.0,0.849,0.00540540540541]
["TCGA_BRCA","TCGA-A2-A3XS-01A","5:ADCY2:7717237:+:5:FGF10-AS1:44395237:+:reg","ADCY2--FGF10-AS1","ENSG00000078295","ENSG00000248464",5.0,1.0,1.0,1.0,0.938,0.0027027027027]
["TCGA_BRCA","TCGA-A2-A3XS-01A","5:ADCY2:7717237:+:5:FGF10-AS1:44412391:+:reg","ADCY2--FGF10-AS1","ENSG00000078295","ENSG00000248464",2.0,1.0,1.0,1.0,0.833,0.00540540540541]
["TCGA_BRCA","TCGA-A2-A3XT-01A","11:OSBP:59593604:-:11:AP002892.1:72363383:+:strandcross","OSBP--AP002892.1","ENSG00000110048","ENSG00000255672",8.0,1.0,1.0,1.0,0.521,0.00639658848614]
["TCGA_BRCA","TCGA-A2-A3XT-01A","19:ACTN4:38647907:+:19:DAZAP1:1417500:+:rev","ACTN4--DAZAP1","ENSG00000130402","ENSG00000071626",3.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_BRCA","TCGA-A2-A3XT-01A","4:ELOVL6:110105497:-:11:AP003049.2:109365068:-:fusion","ELOVL6--AP003049.2","ENSG00000170522","ENSG00000255028",1.0,1.0,1.0,1.0,0.963,0.00426439232409]
["TCGA_BRCA","TCGA-A2-A3XT-01A","10:RSU1:16816973:-:10:CUBN:16907679:-:rev","RSU1--CUBN","ENSG00000148484","ENSG00000107611",12.0,1.0,1.0,1.0,0.507,"NA"]
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["TCGA_BRCA","TCGA-A7-A4SD-01A","12:PRICKLE1:42589465:-:7:SND1:127721287:+:fusion","PRICKLE1--SND1","ENSG00000139174","ENSG00000197157",3.0,1.0,1.0,1.0,0.639,0.00561797752809]
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["TCGA_BRCA","TCGA-A7-A6VX-01A","22:PVALB:36813646:-:22:MPST:37029216:+:strandcross","PVALB--MPST","ENSG00000100362","ENSG00000128309",5.0,1.0,1.0,1.0,0.963,0.0]
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["TCGA_BRCA","TCGA-A8-A06R-01A","11:DNAJC24:31370859:+:11:IMMP1L:31463305:-:strandcross","DNAJC24--IMMP1L","ENSG00000170946","ENSG00000148950",4.0,2.0,1.0,1.0,0.595,0.00763358778626]
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["TCGA_BRCA","TCGA-A8-A06Y-01A","16:ITFG1:47365788:-:16:LONP2:48334216:+:strandcross","ITFG1--LONP2","ENSG00000129636","ENSG00000102910",4.0,1.0,1.0,1.0,0.984,0.0]
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["TCGA_BRCA","TCGA-A8-A075-01A","X:ENOX2:130901684:-:8:SNTG1:50172561:+:fusion","ENOX2--SNTG1","ENSG00000165675","ENSG00000147481",1.0,1.0,1.0,1.0,0.89,0.0]
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["TCGA_BRCA","TCGA-A8-A07R-01A","22:RPL3:39314107:-:17:P4HB:81844092:-:fusion","RPL3--P4HB","ENSG00000100316","ENSG00000185624",2.0,1.0,1.0,1.0,0.8,0.00460829493088]
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["TCGA_BRCA","TCGA-A8-A082-01A","8:GPAT4:41578278:+:8:LINC01288:34792758:+:rev","GPAT4--LINC01288","ENSG00000158669","ENSG00000254344",11.0,1.0,1.0,1.0,0.681,0.00806451612903]
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["TCGA_BRCA","TCGA-A8-A09I-01A","11:CTTN:70398614:+:11:ACTN3:66558027:+:rev","CTTN--ACTN3","ENSG00000085733","ENSG00000248746",8.0,1.0,1.0,1.0,0.499,0.00758533501896]
["TCGA_BRCA","TCGA-A8-A09I-01A","11:MIR4300HG:82099974:-:11:MAP6:75608322:-:reg","MIR4300HG--MAP6","ENSG00000245832","ENSG00000171533",3.0,1.0,1.0,1.0,0.728,0.00505689001264]
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["TCGA_BRCA","TCGA-A8-A09I-01A","17:FBXL20:39401361:-:17:ERBB2:39706990:+:strandcross","FBXL20--ERBB2","ENSG00000108306","ENSG00000141736",6.0,1.0,1.0,1.0,0.96,0.00126422250316]
["TCGA_BRCA","TCGA-A8-A09I-01A","17:FBXL20:39402173:-:17:AC015845.2:57772196:-:rev","FBXL20--AC015845.2","ENSG00000108306","ENSG00000265542",10.0,1.0,1.0,1.0,0.982,0.0]
["TCGA_BRCA","TCGA-A8-A09I-01A","17:FBXL20:39402173:-:17:ERBB2:39706990:+:strandcross","FBXL20--ERBB2","ENSG00000108306","ENSG00000141736",2.0,1.0,1.0,1.0,0.738,0.00505689001264]
["TCGA_BRCA","TCGA-A8-A09I-01A","17:USP32:60207021:-:17:CDK12:39564760:+:strandcross","USP32--CDK12","ENSG00000170832","ENSG00000167258",4.0,1.0,1.0,1.0,0.402,0.00884955752212]
["TCGA_BRCA","TCGA-A8-A09I-01A","7:AC010655.4:128479513:+:17:CA10:51653736:-:fusion","AC010655.4--CA10","ENSG00000273184","ENSG00000154975",3.0,1.0,1.0,1.0,0.753,0.00379266750948]
["TCGA_BRCA","TCGA-A8-A09K-01A","19:GATAD2A:19436219:+:19:MAU2:19335718:+:rev","GATAD2A--MAU2","ENSG00000167491","ENSG00000129933",2.0,1.0,1.0,1.0,0.74,"NA"]
["TCGA_BRCA","TCGA-A8-A09M-01A","16:PIEZO1:88726284:-:16:APRT:88809706:-:rev","PIEZO1--APRT","ENSG00000103335","ENSG00000198931",3.0,1.0,1.0,1.0,0.957,"NA"]
["TCGA_BRCA","TCGA-A8-A09M-01A","16:PIEZO1:88726284:-:16:APRT:88809840:-:rev","PIEZO1--APRT","ENSG00000103335","ENSG00000198931",54.0,1.0,1.0,1.0,0.57175278218681,"NA"]
["TCGA_BRCA","TCGA-A8-A09M-01A","6:AFDN:167925091:+:6:FGFR1OP:167039904:+:rev","AFDN--FGFR1OP","ENSG00000130396","ENSG00000213066",1.0,1.0,1.0,1.0,0.89,"NA"]
["TCGA_BRCA","TCGA-A8-A09N-01A","7:NUB1:151360914:+:1:SARS:109223978:+:fusion","NUB1--SARS","ENSG00000013374","ENSG00000031698",3.0,3.0,1.0,1.0,0.232,0.0403587443946]
["TCGA_BRCA","TCGA-A8-A09N-01A","8:SYBU:109618842:-:14:AL392023.2:38039430:-:fusion","SYBU--AL392023.2","ENSG00000147642","ENSG00000259048",2.0,1.0,1.0,1.0,0.466,0.00896860986547]
["TCGA_BRCA","TCGA-A8-A09N-01A","10:LRMDA:75438494:+:10:ADK:74525256:+:rev","LRMDA--ADK","ENSG00000148655","ENSG00000156110",6.0,4.0,3.0,3.0,0.941,"NA"]
["TCGA_BRCA","TCGA-A8-A09N-01A","12:ATXN2:111509549:-:12:MAPKAPK5-AS1:111840003:-:rev","ATXN2--MAPKAPK5-AS1","ENSG00000204842","ENSG00000234608",6.0,1.0,1.0,1.0,0.903,"NA"]
["TCGA_BRCA","TCGA-A8-A09N-01A","12:ATXN2:111509549:-:12:MAPKAPK5-AS1:111840477:-:rev","ATXN2--MAPKAPK5-AS1","ENSG00000204842","ENSG00000234608",9.0,1.0,1.0,1.0,0.696,"NA"]
["TCGA_BRCA","TCGA-A8-A09N-01A","21:ITSN1:33642713:+:21:IFNGR2:33432177:+:rev","ITSN1--IFNGR2","ENSG00000205726","ENSG00000159128",2.0,1.0,1.0,1.0,0.657,"NA"]
["TCGA_BRCA","TCGA-A8-A09Q-01A","17:CEP112:66005690:-:2:FAM237A:206648661:+:fusion","CEP112--FAM237A","ENSG00000154240","ENSG00000235118",4.0,1.0,1.0,1.0,0.778,0.00987654320988]
["TCGA_BRCA","TCGA-A8-A09Q-01A","22:TTC28:28296198:-:5:AC244517.5:141046566:-:fusion","TTC28--AC244517.5","ENSG00000100154","ENSG00000279047",22.0,1.0,1.0,1.0,0.701534830835415,0.0123456790123]
["TCGA_BRCA","TCGA-A8-A09Q-01A","2:INO80D:206056198:-:21:LINC00649:33945810:+:fusion","INO80D--LINC00649","ENSG00000114933","ENSG00000237945",3.0,1.0,1.0,1.0,0.895,0.00246913580247]
["TCGA_BRCA","TCGA-A8-A09R-01A","5:FGF10:44388358:-:5:AC093297.2:44745408:-:rev","FGF10--AC093297.2","ENSG00000070193","ENSG00000251141",3.0,4.0,3.0,3.0,0.732,"NA"]
["TCGA_BRCA","TCGA-A8-A09T-01A","10:GRID1:86363941:-:10:WAPL:86461287:-:rev","GRID1--WAPL","ENSG00000182771","ENSG00000062650",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-A8-A09T-01A","12:LUM:91111398:-:12:DCN:91178585:-:rev","LUM--DCN","ENSG00000139329","ENSG00000011465",1.0,2.0,1.0,1.0,0.934,"NA"]
["TCGA_BRCA","TCGA-A8-A09T-01A","14:FRMD6:51651996:+:14:LINC00640:51348507:+:rev","FRMD6--LINC00640","ENSG00000139926","ENSG00000258479",2.0,1.0,1.0,1.0,0.623,"NA"]
["TCGA_BRCA","TCGA-A8-A09W-01A","1:SNAP47:227759485:+:1:LINC01641:227409755:+:rev","SNAP47--LINC01641","ENSG00000143740","ENSG00000234277",2.0,1.0,1.0,1.0,0.789,"NA"]
["TCGA_BRCA","TCGA-A8-A09X-01A","3:ITGB5:124841383:-:10:AL358234.1:28436221:-:fusion","ITGB5--AL358234.1","ENSG00000082781","ENSG00000237128",9.0,1.0,1.0,1.0,0.537,0.00911854103343]
["TCGA_BRCA","TCGA-A8-A09X-01A","3:ITGB5:124841383:-:10:WAC-AS1:28526008:-:fusion","ITGB5--WAC-AS1","ENSG00000082781","ENSG00000254635",73.0,1.0,1.0,1.0,0.710960355611138,0.00607902735562]
["TCGA_BRCA","TCGA-A8-A09X-01A","10:ASCC1:72196811:-:10:P4HA1:73016899:-:rev","ASCC1--P4HA1","ENSG00000138303","ENSG00000122884",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BRCA","TCGA-A8-A0A1-01A","22:PACSIN2:43015021:-:2:GPC1:240459030:+:fusion","PACSIN2--GPC1","ENSG00000100266","ENSG00000063660",1.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_BRCA","TCGA-A8-A0A4-01A","11:PRPF19:60897846:-:11:RAB3IL1:61908306:-:rev","PRPF19--RAB3IL1","ENSG00000110107","ENSG00000167994",3.0,1.0,1.0,1.0,0.31,0.0307692307692]
["TCGA_BRCA","TCGA-A8-A0A4-01A","13:TDRD3:60467379:+:13:AL160396.2:114196396:+:reg","TDRD3--AL160396.2","ENSG00000083544","ENSG00000283361",4.0,1.0,1.0,1.0,0.281,0.0307692307692]
["TCGA_BRCA","TCGA-A8-A0A4-01A","17:FLII:18248800:-:17:TOP3A:18307570:-:rev","FLII--TOP3A","ENSG00000177731","ENSG00000177302",2.0,1.0,1.0,1.0,0.414,"NA"]
["TCGA_BRCA","TCGA-A8-A0A6-01A","11:ANO1:70132079:+:1:IGSF3:116616457:-:fusion","ANO1--IGSF3","ENSG00000131620","ENSG00000143061",26.0,1.0,1.0,1.0,0.654676917747319,0.0106761565836]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76067371:-:12:AC138123.3:93091340:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",258.0,1.0,1.0,1.0,0.997974882304326,0.0]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76067371:-:12:AC138123.3:93106322:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",13.0,1.0,1.0,1.0,0.593,0.00650759219089]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76067371:-:12:AC138123.3:93107308:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",14.0,1.0,1.0,1.0,0.754,0.00433839479393]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76068909:-:12:AC138123.3:93091340:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",1.0,1.0,1.0,1.0,0.823,0.00433839479393]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76074203:-:12:AC138123.3:93091340:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",12.0,1.0,1.0,1.0,0.668,0.00433839479393]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76084567:-:12:AC138123.3:93091340:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",4.0,1.0,1.0,1.0,0.314,0.0195227765727]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76084567:-:12:AC138123.3:93096115:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",9.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BRCA","TCGA-A8-A0A7-01A","12:NAP1L1:76084567:-:12:AC138123.3:93106322:+:strandcross","NAP1L1--AC138123.3","ENSG00000187109","ENSG00000257746",2.0,1.0,1.0,1.0,0.8,0.00433839479393]
["TCGA_BRCA","TCGA-A8-A0A7-01A","17:SP2-AS1:47918452:-:12:RNF41:56210568:-:fusion","SP2-AS1--RNF41","ENSG00000234494","ENSG00000181852",5.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-A8-A0A7-01A","19:MZF1-AS1:58559409:+:19:UBE2M:58557157:-:strandcross","MZF1-AS1--UBE2M","ENSG00000267858","ENSG00000130725",147.0,1.0,1.0,1.0,0.861855808210457,0.0]
["TCGA_BRCA","TCGA-A8-A0A7-01A","8:PLEKHF2:95134030:+:8:ESRP1:94705925:+:rev","PLEKHF2--ESRP1","ENSG00000175895","ENSG00000104413",3.0,1.0,3.0,1.0,0.898,"NA"]
["TCGA_BRCA","TCGA-A8-A0A9-01A","12:METTL25:82358824:+:12:AC078923.1:75631314:-:strandcross","METTL25--AC078923.1","ENSG00000127720","ENSG00000258077",3.0,1.0,1.0,1.0,0.159,0.0408163265306]
["TCGA_BRCA","TCGA-A8-A0AD-01A","9:PHF2:93576871:+:9:FAM120A:93471141:+:rev","PHF2--FAM120A","ENSG00000197724","ENSG00000048828",2.0,1.0,2.0,1.0,0.751,"NA"]
["TCGA_BRCA","TCGA-AC-A23C-01A","12:PPM1H:62934492:-:12:AC025419.1:65570048:-:rev","PPM1H--AC025419.1","ENSG00000111110","ENSG00000250748",8.0,1.0,1.0,1.0,0.674,0.0062630480167]
["TCGA_BRCA","TCGA-AC-A23C-01A","18:RNF152:61892795:-:18:AC113137.1:60650825:-:reg","RNF152--AC113137.1","ENSG00000176641","ENSG00000267098",2.0,1.0,1.0,1.0,0.859,0.00417536534447]
["TCGA_BRCA","TCGA-AC-A23C-01A","6:DEK:18236452:-:16:CHMP1A:89647331:-:fusion","DEK--CHMP1A","ENSG00000124795","ENSG00000131165",2.0,2.0,1.0,1.0,0.915,0.00208768267223]
["TCGA_BRCA","TCGA-AC-A23C-01A","6:MCUR1:13798833:-:18:AC090371.2:32937986:+:fusion","MCUR1--AC090371.2","ENSG00000050393","ENSG00000263765",11.0,1.0,1.0,1.0,0.759,0.0062630480167]
["TCGA_BRCA","TCGA-AC-A23E-01A","12:ZNF605:132956243:-:12:AC123567.2:94168351:-:reg","ZNF605--AC123567.2","ENSG00000072609","ENSG00000258035",6.0,1.0,1.0,1.0,0.904,0.00426439232409]
["TCGA_BRCA","TCGA-AC-A23H-01A","15:DRAIC:69468393:+:15:GLCE:69196415:+:rev","DRAIC--GLCE","ENSG00000245750","ENSG00000138604",1.0,1.0,1.0,1.0,0.851,"NA"]
["TCGA_BRCA","TCGA-AC-A2B8-01A","3:TOPBP1:133637876:-:3:RYK:134159373:-:rev","TOPBP1--RYK","ENSG00000163781","ENSG00000163785",1.0,1.0,1.0,1.0,0.97,"NA"]
["TCGA_BRCA","TCGA-AC-A2BK-01A","11:ABTB2:34356701:-:11:TYR:89295143:+:strandcross","ABTB2--TYR","ENSG00000166016","ENSG00000077498",25.0,1.0,1.0,1.0,0.504883992321619,0.010152284264]
["TCGA_BRCA","TCGA-AC-A2BK-01A","11:CAPRIN1:34097761:+:6:SLC22A23:3272491:-:fusion","CAPRIN1--SLC22A23","ENSG00000135387","ENSG00000137266",2.0,1.0,1.0,1.0,0.977,0.0125]
["TCGA_BRCA","TCGA-AC-A2BK-01A","16:DBNDD1:90008784:-:19:ARHGEF1:41894207:+:fusion","DBNDD1--ARHGEF1","ENSG00000003249","ENSG00000076928",2.0,1.0,1.0,1.0,0.698,0.0166666666667]
["TCGA_BRCA","TCGA-AC-A2BK-01A","17:FOXK2:82586200:+:11:TOLLIP:1286092:-:fusion","FOXK2--TOLLIP","ENSG00000141568","ENSG00000078902",2.0,1.0,1.0,1.0,0.895,0.0125]
["TCGA_BRCA","TCGA-AC-A2BK-01A","19:ARHGEF1:41893303:+:11:B4GALNT4:375461:+:fusion","ARHGEF1--B4GALNT4","ENSG00000076928","ENSG00000182272",5.0,1.0,1.0,1.0,0.996,0.00416666666667]
["TCGA_BRCA","TCGA-AC-A2BK-01A","19:PPP1R12C:55094345:-:19:TPGS1:518889:+:strandcross","PPP1R12C--TPGS1","ENSG00000125503","ENSG00000141933",2.0,1.0,1.0,1.0,0.682,0.0166666666667]
["TCGA_BRCA","TCGA-AC-A2BK-01A","19:SBNO2:1149369:-:19:ARHGEF1:41894207:+:strandcross","SBNO2--ARHGEF1","ENSG00000064932","ENSG00000076928",12.0,1.0,1.0,1.0,0.86,0.0125]
["TCGA_BRCA","TCGA-AC-A2BK-01A","1:CAMSAP2:200815644:+:1:AL512488.1:93754346:-:strandcross","CAMSAP2--AL512488.1","ENSG00000118200","ENSG00000230439",10.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-AC-A2BK-01A","1:GPBP1L1:45654543:-:1:MAST2:45824433:+:strandcross","GPBP1L1--MAST2","ENSG00000159592","ENSG00000086015",8.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-AC-A2BK-01A","7:FAM20C:208976:+:21:ADARB1:45225547:+:fusion","FAM20C--ADARB1","ENSG00000177706","ENSG00000197381",3.0,1.0,1.0,1.0,0.957,0.0125]
["TCGA_BRCA","TCGA-AC-A2BK-01A","3:BOC:113216278:+:3:AC078785.1:113061787:+:rev","BOC--AC078785.1","ENSG00000144857","ENSG00000240057",1.0,1.0,1.0,1.0,0.818,"NA"]
["TCGA_BRCA","TCGA-AC-A2BK-01A","5:MYO10:16877609:-:5:AC026790.1:17162565:-:rev","MYO10--AC026790.1","ENSG00000145555","ENSG00000215196",5.0,1.0,1.0,1.0,0.7,"NA"]
["TCGA_BRCA","TCGA-AC-A2BM-01A","17:GJC1:44830062:-:17:AC138150.2:45171182:-:rev","GJC1--AC138150.2","ENSG00000182963","ENSG00000267288",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_BRCA","TCGA-AC-A2BM-01A","2:SPTBN1:54637803:+:2:C2orf73:54381846:+:rev","SPTBN1--C2orf73","ENSG00000115306","ENSG00000177994",3.0,2.0,1.0,1.0,0.444,"NA"]
["TCGA_BRCA","TCGA-AC-A2BM-01A","8:WWP1:86398638:+:8:AC100801.1:85885935:+:rev","WWP1--AC100801.1","ENSG00000123124","ENSG00000253154",20.0,1.0,1.0,1.0,0.812609002344864,"NA"]
["TCGA_BRCA","TCGA-AC-A2FB-01A","17:ATAD5:30840781:+:11:AP003063.1:112541293:+:fusion","ATAD5--AP003063.1","ENSG00000176208","ENSG00000254968",3.0,1.0,1.0,1.0,0.918,0.00249376558603]
["TCGA_BRCA","TCGA-AC-A2FM-01A","19:AC020915.1:58306216:+:19:ZNF543:57323682:+:rev","AC020915.1--ZNF543","ENSG00000283515","ENSG00000178229",12.0,1.0,1.0,1.0,0.945,"NA"]
["TCGA_BRCA","TCGA-AC-A2QH-01A","7:ST7:117138532:+:7:STAG3:100195309:+:rev","ST7--STAG3","ENSG00000004866","ENSG00000066923",4.0,1.0,1.0,1.0,0.16,0.0324543610548]
["TCGA_BRCA","TCGA-AC-A2QH-01A","18:AP005328.1:1133952:+:18:USP14:192842:+:rev","AP005328.1--USP14","ENSG00000263551","ENSG00000101557",2.0,1.0,1.0,1.0,0.882,"NA"]
["TCGA_BRCA","TCGA-AC-A2QH-01A","1:AL035409.1:77068843:+:1:ST6GALNAC5:77062975:+:rev","AL035409.1--ST6GALNAC5","ENSG00000230498","ENSG00000117069",4.0,2.0,2.0,2.0,0.75,"NA"]
["TCGA_BRCA","TCGA-AC-A2QH-01A","2:TSSC1:3338017:-:2:ADI1:3500993:-:rev","TSSC1--ADI1","ENSG00000032389","ENSG00000182551",2.0,1.0,1.0,1.0,0.859,"NA"]
["TCGA_BRCA","TCGA-AC-A2QH-01A","4:CASP3:184631037:-:4:CENPU:184729035:-:rev","CASP3--CENPU","ENSG00000164305","ENSG00000151725",2.0,1.0,1.0,1.0,0.84,"NA"]
["TCGA_BRCA","TCGA-AC-A2QI-01A","17:KRT19:41525191:-:17:ERBB2:39727689:+:strandcross","KRT19--ERBB2","ENSG00000171345","ENSG00000141736",3.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BRCA","TCGA-AC-A3OD-01A","11:LRP5:68312805:+:11:MEN1:64805198:-:strandcross","LRP5--MEN1","ENSG00000162337","ENSG00000133895",3.0,1.0,1.0,1.0,0.234,0.0342105263158]
["TCGA_BRCA","TCGA-AC-A3OD-01A","19:BORCS8-MEF2B:19192081:-:18:LINC01255:11488834:+:fusion","BORCS8-MEF2B--LINC01255","ENSG00000064489","ENSG00000267252",7.0,4.0,2.0,2.0,0.336,0.0342105263158]
["TCGA_BRCA","TCGA-AC-A3OD-01B","19:BORCS8-MEF2B:19192081:-:18:LINC01255:11488834:+:fusion","BORCS8-MEF2B--LINC01255","ENSG00000064489","ENSG00000267252",11.0,4.0,2.0,2.0,0.966,0.00261780104712]
["TCGA_BRCA","TCGA-AC-A3QP-01A","1:KYAT3:88988252:-:1:GBP2:89110266:-:rev","KYAT3--GBP2","ENSG00000137944","ENSG00000162645",2.0,1.0,1.0,1.0,0.924,"NA"]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","17:DDX52:37642110:-:11:RNF121:71960750:+:fusion","DDX52--RNF121","ENSG00000278053","ENSG00000137522",2.0,1.0,1.0,1.0,0.865,0.00211416490486]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","17:TMEM99:40819208:+:17:AC005828.2:63305612:-:strandcross","TMEM99--AC005828.2","ENSG00000167920","ENSG00000263501",2.0,1.0,1.0,1.0,0.255,0.0232558139535]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","21:LINC00205:45293522:+:21:BX322557.1:45289351:+:rev","LINC00205--BX322557.1","ENSG00000223768","ENSG00000215447",3.0,4.0,1.0,1.0,0.534,"NA"]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","2:AC009228.1:24214425:+:2:FAM228B:24135119:+:rev","AC009228.1--FAM228B","ENSG00000242628","ENSG00000219626",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BRCA","TCGA-AC-A3QQ-01A","2:RHBDD1:226914351:+:2:AC010735.2:226807486:+:rev","RHBDD1--AC010735.2","ENSG00000144468","ENSG00000272622",2.0,1.0,2.0,1.0,0.747,"NA"]
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["TCGA_BRCA","TCGA-AC-A3TM-01A","19:ETHE1:43526515:-:17:AC079336.4:32531229:+:fusion","ETHE1--AC079336.4","ENSG00000105755","ENSG00000266599",5.0,1.0,1.0,1.0,0.897,0.0]
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["TCGA_BRCA","TCGA-AC-A3YI-01A","12:NCOR2:124372022:-:22:TSPO:43159210:+:fusion","NCOR2--TSPO","ENSG00000196498","ENSG00000100300",3.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BRCA","TCGA-AC-A3YI-01A","22:SF3A1:30356730:-:22:SFI1:31556942:+:strandcross","SF3A1--SFI1","ENSG00000099995","ENSG00000198089",3.0,1.0,1.0,1.0,0.41,0.0143369175627]
["TCGA_BRCA","TCGA-AC-A3YJ-01A","3:LMLN:197960440:+:3:RPL35A:197954003:+:rev","LMLN--RPL35A","ENSG00000185621","ENSG00000182899",2.0,2.0,2.0,1.0,0.984,"NA"]
["TCGA_BRCA","TCGA-AC-A4ZE-01A","11:SERPINH1:75562319:+:11:AP003065.1:72658069:+:rev","SERPINH1--AP003065.1","ENSG00000149257","ENSG00000255808",3.0,1.0,1.0,1.0,0.998,0.0047619047619]
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["TCGA_BRCA","TCGA-AC-A4ZE-01A","11:SHANK2:70798443:-:11:AP001107.5:66416793:+:strandcross","SHANK2--AP001107.5","ENSG00000162105","ENSG00000254510",164.0,1.0,1.0,1.0,0.98295940557235,0.0047619047619]
["TCGA_BRCA","TCGA-AC-A4ZE-01A","21:MIR99AHG:16419741:+:21:NRIP1:14968526:-:strandcross","MIR99AHG--NRIP1","ENSG00000215386","ENSG00000180530",12.0,1.0,1.0,1.0,0.713,0.0190476190476]
["TCGA_BRCA","TCGA-AC-A4ZE-01A","21:MIR99AHG:16420572:+:21:NRIP1:14968526:-:strandcross","MIR99AHG--NRIP1","ENSG00000215386","ENSG00000180530",2.0,1.0,1.0,1.0,0.955,0.0047619047619]
["TCGA_BRCA","TCGA-AC-A5XS-01A","1:SERINC2:31429538:+:19:TPGS1:518889:+:fusion","SERINC2--TPGS1","ENSG00000168528","ENSG00000141933",3.0,1.0,1.0,1.0,0.8,0.00201207243461]
["TCGA_BRCA","TCGA-AC-A5XU-01A","10:C10orf35:69631547:+:18:AC012588.1:26689355:+:fusion","C10orf35--AC012588.1","ENSG00000171224","ENSG00000263677",3.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","10:C10orf35:69631839:+:18:AC012588.1:26689355:+:fusion","C10orf35--AC012588.1","ENSG00000171224","ENSG00000263677",5.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","17:GRB2:75393551:-:17:LINC01987:77725002:-:rev","GRB2--LINC01987","ENSG00000177885","ENSG00000267790",41.0,1.0,1.0,1.0,0.960988280445643,0.0]
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["TCGA_BRCA","TCGA-AC-A5XU-01A","19:FXYD3:35119416:+:19:AC006116.8:56340786:+:reg","FXYD3--AC006116.8","ENSG00000089356","ENSG00000267549",28.0,1.0,1.0,1.0,0.890270858713535,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","19:SIPA1L3:37907358:+:19:AC020928.1:36775386:+:rev","SIPA1L3--AC020928.1","ENSG00000105738","ENSG00000267260",2.0,1.0,1.0,1.0,0.792,0.00260416666667]
["TCGA_BRCA","TCGA-AC-A5XU-01A","20:EBF4:2709642:+:18:AC009802.1:63966868:-:fusion","EBF4--AC009802.1","ENSG00000088881","ENSG00000283667",4.0,1.0,1.0,1.0,0.974,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","8:AC083923.2:126557931:+:19:AC020915.1:58312166:+:fusion","AC083923.2--AC020915.1","ENSG00000254286","ENSG00000283515",2.0,1.0,1.0,1.0,0.959,0.0]
["TCGA_BRCA","TCGA-AC-A5XU-01A","8:ZC3H3:143465717:-:19:AC011523.1:50850911:+:fusion","ZC3H3--AC011523.1","ENSG00000014164","ENSG00000267968",13.0,1.0,1.0,1.0,0.247,0.0260416666667]
["TCGA_BRCA","TCGA-AC-A5XU-01A","10:INPP5A:132765846:+:10:PPP2R2D:131955684:+:rev","INPP5A--PPP2R2D","ENSG00000068383","ENSG00000175470",2.0,1.0,1.0,1.0,0.566,"NA"]
["TCGA_BRCA","TCGA-AC-A5XU-01A","7:DNAJB6:157367483:+:7:UBE3C:157267585:+:rev","DNAJB6--UBE3C","ENSG00000105993","ENSG00000009335",32.0,3.0,1.0,1.0,0.654759073292469,"NA"]
["TCGA_BRCA","TCGA-AC-A62V-01A","14:MIPOL1:37198278:+:14:LINC00639:38890798:-:strandcross","MIPOL1--LINC00639","ENSG00000151338","ENSG00000259070",3.0,1.0,1.0,1.0,0.338,0.00595238095238]
["TCGA_BRCA","TCGA-AC-A62V-01A","17:HEATR6:60070706:-:20:PLCG1-AS1:41098824:-:fusion","HEATR6--PLCG1-AS1","ENSG00000068097","ENSG00000226648",4.0,1.0,1.0,1.0,0.828,0.00297619047619]
["TCGA_BRCA","TCGA-AC-A62V-01A","17:HEATR6:60070706:-:20:PLCG1-AS1:41101289:-:fusion","HEATR6--PLCG1-AS1","ENSG00000068097","ENSG00000226648",6.0,1.0,1.0,1.0,0.951,0.0]
["TCGA_BRCA","TCGA-AC-A62V-01A","17:MYO18A:29086438:-:17:AC005544.1:67020271:-:rev","MYO18A--AC005544.1","ENSG00000196535","ENSG00000264491",39.0,1.0,1.0,1.0,0.91344038381105,0.00297619047619]
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["TCGA_BRCA","TCGA-AC-A62V-01A","1:LAMTOR5-AS1:110383000:+:1:KIAA1324:109199854:+:rev","LAMTOR5-AS1--KIAA1324","ENSG00000224699","ENSG00000116299",2.0,1.0,1.0,1.0,0.888,0.00297619047619]
["TCGA_BRCA","TCGA-AC-A62V-01A","20:PREX1:48734546:-:20:APCDD1L-AS1:58573576:+:strandcross","PREX1--APCDD1L-AS1","ENSG00000124126","ENSG00000231290",27.0,1.0,1.0,1.0,0.913832265876024,0.00297619047619]
["TCGA_BRCA","TCGA-AC-A62V-01A","20:RBM39:35709224:-:17:AC005856.1:61130891:-:fusion","RBM39--AC005856.1","ENSG00000131051","ENSG00000267667",4.0,1.0,1.0,1.0,0.26,0.00892857142857]
["TCGA_BRCA","TCGA-AC-A62V-01A","4:CISD2:102869187:+:14:AL110292.1:27077238:+:fusion","CISD2--AL110292.1","ENSG00000145354","ENSG00000258081",2.0,1.0,1.0,1.0,0.62,0.00297619047619]
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["TCGA_BRCA","TCGA-AC-A7VB-01A","12:AC134511.1:67069050:-:12:MDM2:68809208:+:strandcross","AC134511.1--MDM2","ENSG00000256248","ENSG00000135679",7.0,1.0,1.0,1.0,0.657,0.0130718954248]
["TCGA_BRCA","TCGA-AC-A7VB-01A","14:SYNE2:64121061:+:14:ESR2:64283075:-:strandcross","SYNE2--ESR2","ENSG00000054654","ENSG00000140009",2.0,1.0,1.0,1.0,0.842,0.00980392156863]
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["TCGA_BRCA","TCGA-AC-A7VB-01A","19:LMNB2:2444404:-:12:AC090503.2:73143854:-:fusion","LMNB2--AC090503.2","ENSG00000176619","ENSG00000258294",6.0,1.0,1.0,1.0,0.976,0.00326797385621]
["TCGA_BRCA","TCGA-AC-A7VB-01A","6:TRAF3IP2-AS1:111483665:+:6:NT5DC1:116236966:+:reg","TRAF3IP2-AS1--NT5DC1","ENSG00000231889","ENSG00000178425",5.0,1.0,1.0,1.0,0.991,0.00326797385621]
["TCGA_BRCA","TCGA-AC-A7VB-01A","8:ASPH:61548071:-:8:AC021393.1:60074594:+:strandcross","ASPH--AC021393.1","ENSG00000198363","ENSG00000254775",6.0,1.0,1.0,1.0,0.937,0.00326797385621]
["TCGA_BRCA","TCGA-AC-A7VB-01A","8:LINC01605:37473078:-:12:CPM:68871956:-:fusion","LINC01605--CPM","ENSG00000253161","ENSG00000135678",2.0,1.0,1.0,1.0,0.764,0.0130718954248]
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["TCGA_BRCA","TCGA-AC-A7VB-01A","8:LINC01605:37473078:-:12:CPM:68885889:-:fusion","LINC01605--CPM","ENSG00000253161","ENSG00000135678",7.0,1.0,1.0,1.0,0.984,0.00326797385621]
["TCGA_BRCA","TCGA-AC-A7VB-01A","8:LINC01605:37475842:-:12:CPM:68885889:-:fusion","LINC01605--CPM","ENSG00000253161","ENSG00000135678",4.0,1.0,1.0,1.0,0.881,0.00653594771242]
["TCGA_BRCA","TCGA-AC-A7VC-01A","7:EGFR:55165437:+:7:AC009468.2:53515276:-:strandcross","EGFR--AC009468.2","ENSG00000146648","ENSG00000234105",4.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-AC-A7VC-01A","8:NDRG1:133297134:-:8:AC104248.1:108918646:-:reg","NDRG1--AC104248.1","ENSG00000104419","ENSG00000253796",3.0,1.0,1.0,1.0,0.839,0.0066889632107]
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["TCGA_BRCA","TCGA-AC-A8OQ-01A","20:LAMA5:62330488:-:20:RBBP8NL:62418465:-:rev","LAMA5--RBBP8NL","ENSG00000130702","ENSG00000130701",2.0,1.0,1.0,1.0,0.579,"NA"]
["TCGA_BRCA","TCGA-AC-A8OQ-01A","8:KIF13B:29262980:-:8:AC131254.1:29845451:-:rev","KIF13B--AC131254.1","ENSG00000197892","ENSG00000248964",1.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_BRCA","TCGA-AC-A8OR-01A","6:PHACTR2:143537207:+:6:AL357507.1:74347075:+:rev","PHACTR2--AL357507.1","ENSG00000112419","ENSG00000223786",3.0,1.0,1.0,1.0,0.738,0.0152671755725]
["TCGA_BRCA","TCGA-AC-A8OS-01A","6:ESR1:151702005:+:6:CCDC170:151573174:+:rev","ESR1--CCDC170","ENSG00000091831","ENSG00000120262",3.0,1.0,1.0,1.0,0.811,"NA"]
["TCGA_BRCA","TCGA-AN-A03Y-01A","8:AC009630.1:41578306:-:11:NARS2:78443758:-:fusion","AC009630.1--NARS2","ENSG00000253133","ENSG00000137513",2.0,1.0,1.0,1.0,0.273,0.054347826087]
["TCGA_BRCA","TCGA-AN-A03Y-01A","8:AC009630.1:41578306:-:11:NARS2:78466013:-:fusion","AC009630.1--NARS2","ENSG00000253133","ENSG00000137513",2.0,1.0,1.0,1.0,0.808,0.0108695652174]
["TCGA_BRCA","TCGA-AN-A03Y-01A","8:AC009630.1:41578306:-:11:NARS2:78478683:-:fusion","AC009630.1--NARS2","ENSG00000253133","ENSG00000137513",14.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_BRCA","TCGA-AN-A03Y-01A","8:AC009630.1:41578306:-:11:NARS2:78493195:-:fusion","AC009630.1--NARS2","ENSG00000253133","ENSG00000137513",54.0,1.0,1.0,1.0,0.952487897829525,0.0]
["TCGA_BRCA","TCGA-AN-A03Y-01A","8:FNTA:43083180:+:8:TCEA1:54010492:-:strandcross","FNTA--TCEA1","ENSG00000168522","ENSG00000187735",3.0,1.0,1.0,1.0,0.243,0.031007751938]
["TCGA_BRCA","TCGA-AN-A041-01A","8:KHDRBS3:135582073:+:8:ZNF707:143709253:+:reg","KHDRBS3--ZNF707","ENSG00000131773","ENSG00000181135",4.0,1.0,1.0,1.0,0.405,0.0149253731343]
["TCGA_BRCA","TCGA-AN-A046-01A","17:RARA:40331396:+:16:AC140504.1:15515305:+:fusion","RARA--AC140504.1","ENSG00000131759","ENSG00000261130",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-AN-A04C-01A","17:MED1:39415026:-:17:AC090283.1:40809149:+:strandcross","MED1--AC090283.1","ENSG00000125686","ENSG00000264488",12.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BRCA","TCGA-AN-A04C-01A","6:ATG5:106279661:-:6:AL080314.1:106699842:+:strandcross","ATG5--AL080314.1","ENSG00000057663","ENSG00000229654",3.0,1.0,1.0,1.0,0.682,0.0]
["TCGA_BRCA","TCGA-AN-A04C-01A","6:UTRN:144577288:+:6:PERP:138096494:-:strandcross","UTRN--PERP","ENSG00000152818","ENSG00000112378",20.0,1.0,1.0,1.0,0.8076570975248,0.0]
["TCGA_BRCA","TCGA-AN-A04D-01A","16:NME4:399739:+:19:CALR:12943537:+:fusion","NME4--CALR","ENSG00000103202","ENSG00000179218",2.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-AN-A04D-01A","20:NPEPL1:58707200:+:1:EVI5:92736627:-:fusion","NPEPL1--EVI5","ENSG00000254995","ENSG00000067208",5.0,1.0,1.0,1.0,0.772,0.00970873786408]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","10:JMJD1C:63521738:-:10:ZMIZ1:79118915:+:strandcross","JMJD1C--ZMIZ1","ENSG00000171988","ENSG00000108175",2.0,1.0,1.0,1.0,0.534,0.00867052023121]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","1:MYSM1:58699985:-:1:PATJ:61787754:+:strandcross","MYSM1--PATJ","ENSG00000162601","ENSG00000132849",3.0,1.0,1.0,1.0,0.979,0.0]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","1:TAF1A:222584128:-:11:AP002495.2:71865854:-:fusion","TAF1A--AP002495.2","ENSG00000143498","ENSG00000254469",16.0,1.0,1.0,1.0,0.285773470804172,0.014450867052]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","1:TAF1A:222588443:-:11:AP002495.2:71865854:-:fusion","TAF1A--AP002495.2","ENSG00000143498","ENSG00000254469",2.0,1.0,1.0,1.0,0.793,0.00578034682081]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","2:ANKRD44:197121332:-:6:CD24:106971834:-:fusion","ANKRD44--CD24","ENSG00000065413","ENSG00000272398",18.0,1.0,1.0,1.0,0.799255466406352,0.00578034682081]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","22:L3MBTL2:41217202:+:22:RBX1:40967799:+:rev","L3MBTL2--RBX1","ENSG00000100395","ENSG00000100387",2.0,1.0,1.0,1.0,0.821,"NA"]
["TCGA_BRCA","TCGA-AN-A0AJ-01A","2:AC108047.1:190535121:+:2:MFSD6:190435977:+:rev","AC108047.1--MFSD6","ENSG00000233654","ENSG00000151690",2.0,1.0,1.0,1.0,0.912,"NA"]
["TCGA_BRCA","TCGA-AN-A0AL-01A","19:UBE2S:55404288:-:19:SHISA7:55440765:-:rev","UBE2S--SHISA7","ENSG00000108106","ENSG00000187902",2.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_BRCA","TCGA-AN-A0AL-01A","7:FBXL18:5505412:-:7:ACTB:5529663:-:rev","FBXL18--ACTB","ENSG00000155034","ENSG00000075624",3.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_BRCA","TCGA-AN-A0AM-01A","11:PDHX:34916815:+:12:AC073530.1:67094857:-:fusion","PDHX--AC073530.1","ENSG00000110435","ENSG00000257083",2.0,1.0,1.0,1.0,0.881,0.00401606425703]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:AC134511.1:67069050:-:12:TRHDE:72286681:+:strandcross","AC134511.1--TRHDE","ENSG00000256248","ENSG00000072657",2.0,1.0,1.0,1.0,0.91,0.00401606425703]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:AC134511.1:67069050:-:X:PIGA:15321772:-:fusion","AC134511.1--PIGA","ENSG00000256248","ENSG00000165195",2.0,1.0,1.0,1.0,0.908,0.00401606425703]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:ERC1:1444750:+:12:LINC02384:68333664:-:strandcross","ERC1--LINC02384","ENSG00000082805","ENSG00000251301",25.0,1.0,1.0,1.0,0.559912651897717,0.00602409638554]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:ERC1:1444750:+:12:LINC02384:68380731:-:strandcross","ERC1--LINC02384","ENSG00000082805","ENSG00000251301",3.0,1.0,1.0,1.0,0.495,0.00803212851406]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:MDM2:68816945:+:10:AC025428.2:85444725:+:fusion","MDM2--AC025428.2","ENSG00000135679","ENSG00000224504",3.0,1.0,1.0,1.0,0.461,0.0100401606426]
["TCGA_BRCA","TCGA-AN-A0AM-01A","12:MDM2:68816945:+:10:AC025428.2:85446792:+:fusion","MDM2--AC025428.2","ENSG00000135679","ENSG00000224504",2.0,1.0,1.0,1.0,0.985,0.0]
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["TCGA_BRCA","TCGA-AN-A0AM-01A","15:USP3:63563008:+:15:AC007950.1:63456817:-:strandcross","USP3--AC007950.1","ENSG00000140455","ENSG00000259268",4.0,1.0,1.0,1.0,0.252,0.0180722891566]
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["TCGA_BRCA","TCGA-AN-A0AT-01A","9:AL162386.2:13276574:-:9:NFIB:14150265:-:rev","AL162386.2--NFIB","ENSG00000234740","ENSG00000147862",1.0,1.0,1.0,1.0,0.954,"NA"]
["TCGA_BRCA","TCGA-AN-A0FD-01A","17:SLC39A11:72849634:-:17:AC005972.4:62929697:-:reg","SLC39A11--AC005972.4","ENSG00000133195","ENSG00000283538",4.0,1.0,1.0,1.0,0.671,0.00636942675159]
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["TCGA_BRCA","TCGA-AN-A0FJ-01A","15:CHSY1:101251137:-:15:LRRK1:101008837:+:strandcross","CHSY1--LRRK1","ENSG00000131873","ENSG00000154237",4.0,1.0,1.0,1.0,0.331,0.0442477876106]
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["TCGA_BRCA","TCGA-AN-A0FK-01A","6:ICK:53061596:-:6:ELOVL5:53295707:-:rev","ICK--ELOVL5","ENSG00000112144","ENSG00000012660",2.0,1.0,1.0,1.0,0.94,"NA"]
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["TCGA_BRCA","TCGA-AN-A0FL-01A","2:PKP4:158457218:+:2:UPP2:157995180:+:rev","PKP4--UPP2","ENSG00000144283","ENSG00000007001",4.0,1.0,1.0,1.0,0.49,"NA"]
["TCGA_BRCA","TCGA-AN-A0FN-01A","10:ANKRD30A:37193258:+:X:AL035425.1:108738429:+:fusion","ANKRD30A--AL035425.1","ENSG00000148513","ENSG00000237863",869.0,1.0,1.0,1.0,0.998522457242366,0.0]
["TCGA_BRCA","TCGA-AN-A0FT-01A","1:POU2F1:167220958:+:1:CTSS:150757980:-:strandcross","POU2F1--CTSS","ENSG00000143190","ENSG00000163131",2.0,1.0,1.0,1.0,0.889,0.0]
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["TCGA_BRCA","TCGA-AN-A0FV-01A","11:GAB2:78417646:-:11:AP001528.2:86922098:-:rev","GAB2--AP001528.2","ENSG00000033327","ENSG00000255471",4.0,1.0,1.0,1.0,0.948,0.00341296928328]
["TCGA_BRCA","TCGA-AN-A0FV-01A","17:FBXL20:39343180:-:17:TSPOAP1-AS1:58337448:+:strandcross","FBXL20--TSPOAP1-AS1","ENSG00000108306","ENSG00000265148",10.0,1.0,1.0,1.0,0.626,0.0136518771331]
["TCGA_BRCA","TCGA-AN-A0FV-01A","17:FBXL20:39343180:-:17:TSPOAP1-AS1:58351744:+:strandcross","FBXL20--TSPOAP1-AS1","ENSG00000108306","ENSG00000265148",2.0,1.0,1.0,1.0,0.836,0.00682593856655]
["TCGA_BRCA","TCGA-AN-A0FV-01A","20:VAPB:58418363:+:17:IKZF3:39832151:-:fusion","VAPB--IKZF3","ENSG00000124164","ENSG00000161405",4.0,1.0,1.0,1.0,0.307,0.0238907849829]
["TCGA_BRCA","TCGA-AN-A0FV-01A","19:EHD2:47718606:+:19:C5AR1:47307725:+:rev","EHD2--C5AR1","ENSG00000024422","ENSG00000197405",2.0,1.0,1.0,1.0,0.538,"NA"]
["TCGA_BRCA","TCGA-AN-A0FW-01A","3:IL1RAP:190514219:+:9:LINC01235:13416545:-:fusion","IL1RAP--LINC01235","ENSG00000196083","ENSG00000270547",15.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_BRCA","TCGA-AN-A0FW-01A","3:IL1RAP:190514219:+:9:LINC01235:13432494:-:fusion","IL1RAP--LINC01235","ENSG00000196083","ENSG00000270547",2.0,1.0,1.0,1.0,0.962,0.0]
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["TCGA_BRCA","TCGA-AN-A0FX-01A","6:ATG5:106279661:-:6:AL356277.3:74594612:-:reg","ATG5--AL356277.3","ENSG00000057663","ENSG00000272243",2.0,1.0,1.0,1.0,0.261,0.025078369906]
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["TCGA_BRCA","TCGA-AN-A0FX-01A","4:CCSER1:90127831:+:4:AC097478.1:89587821:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",7.0,5.0,5.0,5.0,0.689,"NA"]
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["TCGA_BRCA","TCGA-AN-A0FY-01A","20:MIR646HG:60180913:+:20:BCAS1:54058723:-:strandcross","MIR646HG--BCAS1","ENSG00000228340","ENSG00000064787",1.0,1.0,1.0,1.0,0.817,0.0]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","11:PAK1:77473552:-:10:LINC00845:61025792:+:fusion","PAK1--LINC00845","ENSG00000149269","ENSG00000227244",4.0,1.0,1.0,1.0,0.879,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","12:CPSF6:69262562:+:12:AC138331.1:77783263:+:reg","CPSF6--AC138331.1","ENSG00000111605","ENSG00000258066",35.0,1.0,1.0,1.0,0.826306814795547,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","12:FRS2:69532056:+:12:LINC02384:68333664:-:strandcross","FRS2--LINC02384","ENSG00000166225","ENSG00000251301",32.0,1.0,1.0,1.0,0.733435351934629,0.00980392156863]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","14:AL160314.2:22764123:-:1:COL24A1:86059174:-:fusion","AL160314.2--COL24A1","ENSG00000258458","ENSG00000171502",2.0,1.0,1.0,1.0,0.793,0.00735294117647]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","14:DAAM1:59188768:+:14:AL392023.2:38039430:-:strandcross","DAAM1--AL392023.2","ENSG00000100592","ENSG00000259048",6.0,1.0,1.0,1.0,0.378,0.0147058823529]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","16:ATXN2L:28830790:+:16:AC099489.1:11412953:-:strandcross","ATXN2L--AC099489.1","ENSG00000168488","ENSG00000188897",4.0,1.0,1.0,1.0,0.901,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","16:RAB11FIP3:471389:+:7:CREB5:28804199:+:fusion","RAB11FIP3--CREB5","ENSG00000090565","ENSG00000146592",45.0,1.0,1.0,1.0,0.929327824218029,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","1:DHDDS:26433008:+:7:AC007091.1:19578529:+:fusion","DHDDS--AC007091.1","ENSG00000117682","ENSG00000223838",1.0,1.0,1.0,1.0,0.79,0.00735294117647]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","1:SELENOF:86880662:-:14:LINC01500:58888798:+:fusion","SELENOF--LINC01500","ENSG00000183291","ENSG00000258583",5.0,1.0,1.0,1.0,0.515,0.00980392156863]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","20:NPEPL1:58707200:+:12:LINC02373:69459517:+:fusion","NPEPL1--LINC02373","ENSG00000254995","ENSG00000257507",1.0,1.0,1.0,1.0,0.713,0.00980392156863]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","7:KBTBD2:32891536:-:21:LINC00649:33969237:+:fusion","KBTBD2--LINC00649","ENSG00000170852","ENSG00000237945",5.0,1.0,1.0,1.0,0.996,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","7:KBTBD2:32891536:-:7:HDAC9:18496262:+:strandcross","KBTBD2--HDAC9","ENSG00000170852","ENSG00000048052",4.0,1.0,1.0,1.0,0.928,0.0]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","7:SEPT7:35801270:+:7:AC099342.1:20298282:+:rev","SEPT7--AC099342.1","ENSG00000122545","ENSG00000226097",24.0,1.0,1.0,1.0,0.888285058704114,0.00490196078431]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","8:BAG4:38177139:+:11:C11orf24:68268251:-:fusion","BAG4--C11orf24","ENSG00000156735","ENSG00000171067",3.0,1.0,1.0,1.0,0.427,0.0122549019608]
["TCGA_BRCA","TCGA-AN-A0FZ-01A","3:ZPLD1:102229341:+:3:NFKBIZ:101852085:+:rev","ZPLD1--NFKBIZ","ENSG00000170044","ENSG00000144802",2.0,1.0,1.0,1.0,0.882,"NA"]
["TCGA_BRCA","TCGA-AN-A0G0-01A","19:NFIX:13075671:+:19:FARSA-AS1:12933149:+:rev","NFIX--FARSA-AS1","ENSG00000008441","ENSG00000266975",66.0,1.0,1.0,1.0,0.889847173025088,"NA"]
["TCGA_BRCA","TCGA-AN-A0G0-01A","19:NFIX:13078735:+:19:CALR:12944212:+:rev","NFIX--CALR","ENSG00000008441","ENSG00000179218",20.0,1.0,1.0,1.0,0.690312245381048,"NA"]
["TCGA_BRCA","TCGA-AN-A0G0-01A","8:PSD3:18632613:-:8:CSGALNACT1:19408694:-:rev","PSD3--CSGALNACT1","ENSG00000156011","ENSG00000147408",2.0,1.0,1.0,1.0,0.881,"NA"]
["TCGA_BRCA","TCGA-AN-A0XN-01A","1:PGBD5:230350958:-:1:C1orf198:230855718:-:rev","PGBD5--C1orf198","ENSG00000177614","ENSG00000119280",2.0,1.0,1.0,1.0,0.964,"NA"]
["TCGA_BRCA","TCGA-AN-A0XP-01A","22:PACSIN2:43015021:-:22:SCUBE1:43291180:-:rev","PACSIN2--SCUBE1","ENSG00000100266","ENSG00000159307",1.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_BRCA","TCGA-AN-A0XR-01A","1:PRPF3:150333199:+:1:CIART:150286430:+:rev","PRPF3--CIART","ENSG00000117360","ENSG00000159208",2.0,1.0,1.0,1.0,0.878,"NA"]
["TCGA_BRCA","TCGA-AN-A0XT-01A","18:ATP8B1:57650367:-:16:COG7:23417121:-:fusion","ATP8B1--COG7","ENSG00000081923","ENSG00000168434",4.0,1.0,1.0,1.0,0.958,0.0]
["TCGA_BRCA","TCGA-AN-A0XU-01A","10:KIAA1217:24239337:+:2:MYT1L-AS1:2324019:+:fusion","KIAA1217--MYT1L-AS1","ENSG00000120549","ENSG00000225619",2.0,1.0,1.0,1.0,0.634,0.0093896713615]
["TCGA_BRCA","TCGA-AN-A0XU-01A","15:UBE2Q2:75854487:+:3:EAF1-AS1:15441669:-:fusion","UBE2Q2--EAF1-AS1","ENSG00000140367","ENSG00000249786",13.0,1.0,1.0,1.0,0.388,0.0140845070423]
["TCGA_BRCA","TCGA-AN-A0XU-01A","2:DTNB:25652594:-:12:CNOT2:70335438:+:fusion","DTNB--CNOT2","ENSG00000138101","ENSG00000111596",5.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_BRCA","TCGA-AO-A126-01A","11:CPT1A:68807467:-:8:RNF170:42874006:-:fusion","CPT1A--RNF170","ENSG00000110090","ENSG00000120925",2.0,1.0,1.0,1.0,0.805,0.0]
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["TCGA_BRCA","TCGA-AR-A0TS-01A","11:MTMR2:95923875:-:2:LINC01103:104489791:-:fusion","MTMR2--LINC01103","ENSG00000087053","ENSG00000234781",8.0,1.0,1.0,1.0,0.668,0.00518134715026]
["TCGA_BRCA","TCGA-AR-A0TS-01A","14:PRPF39:45084249:+:14:LINC02331:53793396:-:strandcross","PRPF39--LINC02331","ENSG00000185246","ENSG00000235269",1.0,1.0,1.0,1.0,0.707,0.00518134715026]
["TCGA_BRCA","TCGA-AR-A0TS-01A","16:ZNF597:3440807:-:15:LINC01413:57322905:+:fusion","ZNF597--LINC01413","ENSG00000167981","ENSG00000260172",9.0,1.0,1.0,1.0,0.824,0.00518134715026]
["TCGA_BRCA","TCGA-AR-A0TS-01A","3:VGLL4:11643437:-:3:SYNPR-AS1:63423765:-:rev","VGLL4--SYNPR-AS1","ENSG00000144560","ENSG00000241359",5.0,1.0,1.0,1.0,0.85,0.00518134715026]
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["TCGA_BRCA","TCGA-AR-A0TS-01A","8:NCOA2:70403700:-:8:NRG1:32595828:+:strandcross","NCOA2--NRG1","ENSG00000140396","ENSG00000157168",3.0,1.0,1.0,1.0,0.619,0.00518134715026]
["TCGA_BRCA","TCGA-AR-A0TT-01A","15:ST20-MTHFS:79889093:-:17:AC125421.2:73831963:-:fusion","ST20-MTHFS--AC125421.2","ENSG00000136371","ENSG00000265927",4.0,1.0,1.0,1.0,0.881,0.0147058823529]
["TCGA_BRCA","TCGA-AR-A0TT-01A","19:PPP1R12C:55098784:-:19:AC008403.2:48465938:-:reg","PPP1R12C--AC008403.2","ENSG00000125503","ENSG00000268530",6.0,1.0,1.0,1.0,0.913,0.0117647058824]
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["TCGA_BRCA","TCGA-AR-A0U3-01A","19:COQ8B:40714278:-:19:AC011483.2:50990949:+:strandcross","COQ8B--AC011483.2","ENSG00000123815","ENSG00000267879",2.0,1.0,1.0,1.0,0.765,0.0149812734082]
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["TCGA_BRCA","TCGA-AR-A1AP-01A","10:SHOC2:110985765:+:10:PDCD4:110881233:+:rev","SHOC2--PDCD4","ENSG00000108061","ENSG00000150593",3.0,4.0,2.0,1.0,0.995,"NA"]
["TCGA_BRCA","TCGA-AR-A1AQ-01A","10:PLCE1:94171496:+:10:AL358154.1:93777025:-:strandcross","PLCE1--AL358154.1","ENSG00000138193","ENSG00000280485",2.0,1.0,1.0,1.0,0.774,0.00536193029491]
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["TCGA_BRCA","TCGA-AR-A1AR-01A","12:MED13L:116237468:-:12:C12orf49:116720447:-:rev","MED13L--C12orf49","ENSG00000123066","ENSG00000111412",2.0,1.0,1.0,1.0,0.988,"NA"]
["TCGA_BRCA","TCGA-AR-A1AT-01A","15:RPLP1:69453721:+:15:KIF23:69429111:+:rev","RPLP1--KIF23","ENSG00000137818","ENSG00000137807",2.0,3.0,2.0,1.0,0.959,"NA"]
["TCGA_BRCA","TCGA-AR-A1AT-01A","19:AC011444.1:5978514:+:19:CAPS:5914385:+:rev","AC011444.1--CAPS","ENSG00000266983","ENSG00000267314",2.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_BRCA","TCGA-AR-A1AY-01A","6:AL354740.1:34248670:+:6:LTB:31581630:-:strandcross","AL354740.1--LTB","ENSG00000225339","ENSG00000227507",2.0,1.0,1.0,1.0,0.927,0.00354609929078]
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["TCGA_BRCA","TCGA-AR-A24H-01A","10:ANXA7:73414012:-:7:MALSU1:23300839:+:fusion","ANXA7--MALSU1","ENSG00000138279","ENSG00000156928",4.0,1.0,1.0,1.0,0.587,0.003300330033]
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["TCGA_BRCA","TCGA-AR-A24K-01A","14:RAD51B:67835196:+:14:RBM25:73111528:+:reg","RAD51B--RBM25","ENSG00000182185","ENSG00000119707",3.0,1.0,1.0,1.0,0.231,0.030612244898]
["TCGA_BRCA","TCGA-AR-A24L-01A","15:SEMA4B:90160700:+:10:AL137025.1:114775942:+:fusion","SEMA4B--AL137025.1","ENSG00000185033","ENSG00000228484",3.0,1.0,1.0,1.0,0.778,0.00923787528868]
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["TCGA_BRCA","TCGA-AR-A24O-01A","1:SLC25A33:9553805:+:1:AL034417.2:8121474:+:rev","SLC25A33--AL034417.2","ENSG00000171612","ENSG00000238290",2.0,2.0,2.0,2.0,0.9,0.00729927007299]
["TCGA_BRCA","TCGA-AR-A24Q-01A","1:HSPG2:21875629:-:1:LINC01770:1430954:-:reg","HSPG2--LINC01770","ENSG00000142798","ENSG00000225285",17.0,1.0,1.0,1.0,0.895013385645383,0.00542005420054]
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["TCGA_BRCA","TCGA-AR-A24R-01A","6:ESR1:151808364:+:6:CCDC170:151536318:+:rev","ESR1--CCDC170","ENSG00000091831","ENSG00000120262",11.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_BRCA","TCGA-AR-A24S-01A","15:SIN3A:75430187:-:15:GOLGA6L10:82347629:-:rev","SIN3A--GOLGA6L10","ENSG00000169375","ENSG00000278662",25.0,1.0,1.0,1.0,0.62739895111272,0.00645161290323]
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["TCGA_BRCA","TCGA-AR-A24Z-01A","11:LRTOMT:72080885:+:11:ACER3:76926557:+:reg","LRTOMT--ACER3","ENSG00000184154","ENSG00000078124",2.0,1.0,1.0,1.0,0.154,0.0388888888889]
["TCGA_BRCA","TCGA-AR-A24Z-01A","19:ELL:18521921:-:1:LINC01358:58953859:+:fusion","ELL--LINC01358","ENSG00000105656","ENSG00000237352",4.0,1.0,1.0,1.0,0.703,0.0138888888889]
["TCGA_BRCA","TCGA-AR-A24Z-01A","1:PTPN14:214451805:-:1:AL023754.1:209542918:-:reg","PTPN14--AL023754.1","ENSG00000152104","ENSG00000224260",3.0,1.0,1.0,1.0,0.908,0.00555555555556]
["TCGA_BRCA","TCGA-AR-A24Z-01A","1:PTPN14:214451805:-:1:LINC01744:232730781:-:rev","PTPN14--LINC01744","ENSG00000152104","ENSG00000236497",21.0,1.0,1.0,1.0,0.859751638625356,0.0111111111111]
["TCGA_BRCA","TCGA-AR-A250-01A","13:PSPC1:19751271:-:13:LINC00572:29919072:-:rev","PSPC1--LINC00572","ENSG00000121390","ENSG00000224405",12.0,1.0,1.0,1.0,0.219,0.0368271954674]
["TCGA_BRCA","TCGA-AR-A251-01A","11:RAB30:83034172:-:11:AP001189.4:76702972:+:strandcross","RAB30--AP001189.4","ENSG00000137502","ENSG00000254975",2.0,1.0,1.0,1.0,0.6,0.00533807829181]
["TCGA_BRCA","TCGA-AR-A251-01A","11:RAB30:83071691:-:11:AP001189.4:76702972:+:strandcross","RAB30--AP001189.4","ENSG00000137502","ENSG00000254975",31.0,1.0,1.0,1.0,0.905938782843693,0.0]
["TCGA_BRCA","TCGA-AR-A251-01A","13:AL139383.1:33439691:-:13:FGF14:101875296:-:rev","AL139383.1--FGF14","ENSG00000230490","ENSG00000102466",3.0,1.0,1.0,1.0,0.186,0.0195729537367]
["TCGA_BRCA","TCGA-AR-A251-01A","19:LINC00665:36330253:-:19:SPTBN4:40487697:+:strandcross","LINC00665--SPTBN4","ENSG00000232677","ENSG00000160460",43.0,1.0,1.0,1.0,0.34804253248738,0.0106761565836]
["TCGA_BRCA","TCGA-AR-A251-01A","19:LINC00665:36330253:-:19:SPTBN4:40490075:+:strandcross","LINC00665--SPTBN4","ENSG00000232677","ENSG00000160460",10.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BRCA","TCGA-AR-A251-01A","6:FARS2:5545340:+:1:AL355306.2:106038350:+:fusion","FARS2--AL355306.2","ENSG00000145982","ENSG00000237480",2.0,1.0,1.0,1.0,0.683,0.00533807829181]
["TCGA_BRCA","TCGA-AR-A251-01A","7:RAPGEF5:22266964:-:6:AL589740.1:97423469:+:fusion","RAPGEF5--AL589740.1","ENSG00000136237","ENSG00000271860",12.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_BRCA","TCGA-AR-A251-01A","16:GLG1:74606657:-:16:RFWD3:74644735:-:rev","GLG1--RFWD3","ENSG00000090863","ENSG00000168411",3.0,2.0,2.0,2.0,0.408,"NA"]
["TCGA_BRCA","TCGA-AR-A251-01A","17:LRRC75A-AS1:16439414:+:17:UBB:16381902:+:rev","LRRC75A-AS1--UBB","ENSG00000175061","ENSG00000170315",11.0,5.0,5.0,3.0,0.708,"NA"]
["TCGA_BRCA","TCGA-AR-A252-01A","20:ATP9A:51656938:-:21:AP001596.1:26387724:+:fusion","ATP9A--AP001596.1","ENSG00000054793","ENSG00000232692",6.0,1.0,1.0,1.0,0.262,0.0344827586207]
["TCGA_BRCA","TCGA-AR-A252-01A","20:ATP9A:51656938:-:21:AP001596.1:26470751:+:fusion","ATP9A--AP001596.1","ENSG00000054793","ENSG00000232692",4.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_BRCA","TCGA-AR-A252-01A","21:AGPAT3:43959859:+:20:AL050404.1:51000510:+:fusion","AGPAT3--AL050404.1","ENSG00000160216","ENSG00000232358",4.0,1.0,1.0,1.0,0.903,0.0026525198939]
["TCGA_BRCA","TCGA-AR-A254-01A","17:SP2-AS1:47918452:-:17:DNAJC7:42000570:-:reg","SP2-AS1--DNAJC7","ENSG00000234494","ENSG00000168259",5.0,1.0,1.0,1.0,0.938,0.0]
["TCGA_BRCA","TCGA-AR-A254-01A","2:METTL8:171414603:-:2:SLC25A12:171868823:-:rev","METTL8--SLC25A12","ENSG00000123600","ENSG00000115840",2.0,1.0,1.0,1.0,0.927,"NA"]
["TCGA_BRCA","TCGA-AR-A255-01A","8:NSD3:38381799:-:14:AL355916.1:61565388:-:fusion","NSD3--AL355916.1","ENSG00000147548","ENSG00000250548",14.0,1.0,1.0,1.0,0.998,0.00350877192982]
["TCGA_BRCA","TCGA-AR-A256-01A","11:ST14:130160060:+:7:ST7-OT4:117098613:+:fusion","ST14--ST7-OT4","ENSG00000149418","ENSG00000004866",2.0,1.0,1.0,1.0,0.816,0.0]
["TCGA_BRCA","TCGA-AR-A256-01A","12:PITPNM2:123110385:-:12:LINC02418:130037017:-:rev","PITPNM2--LINC02418","ENSG00000090975","ENSG00000214039",11.0,1.0,1.0,1.0,0.651,0.00311526479751]
["TCGA_BRCA","TCGA-AR-A256-01A","19:TMEM147-AS1:35541751:-:22:MTMR3:29957036:+:fusion","TMEM147-AS1--MTMR3","ENSG00000236144","ENSG00000100330",7.0,1.0,1.0,1.0,0.313,0.0155763239875]
["TCGA_BRCA","TCGA-AR-A256-01A","8:PVT1:127794734:+:16:AC099489.1:11417839:-:fusion","PVT1--AC099489.1","ENSG00000249859","ENSG00000188897",5.0,1.0,1.0,1.0,0.41,0.01246105919]
["TCGA_BRCA","TCGA-AR-A256-01A","8:PVT1:127796071:+:16:AC099489.1:11425433:-:fusion","PVT1--AC099489.1","ENSG00000249859","ENSG00000188897",3.0,1.0,1.0,1.0,0.864,0.0]
["TCGA_BRCA","TCGA-AR-A256-01A","12:WNT5B:1530950:+:12:ERC1:1141620:+:rev","WNT5B--ERC1","ENSG00000111186","ENSG00000082805",3.0,1.0,1.0,1.0,0.676,"NA"]
["TCGA_BRCA","TCGA-AR-A256-01A","15:BUB1B:40170681:+:15:THBS1:39587347:+:rev","BUB1B--THBS1","ENSG00000156970","ENSG00000137801",1.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BRCA","TCGA-AR-A256-01A","5:LARP1:154804307:+:5:SAP30L:154455900:+:rev","LARP1--SAP30L","ENSG00000155506","ENSG00000164576",2.0,1.0,1.0,1.0,0.813,"NA"]
["TCGA_BRCA","TCGA-AR-A2LK-01A","11:RAD9A:67321333:+:5:ZNF131:43122039:+:fusion","RAD9A--ZNF131","ENSG00000172613","ENSG00000172262",2.0,1.0,1.0,1.0,0.819,0.0]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:AL117339.5:38096632:+:16:CHMP1A:89647331:-:fusion","AL117339.5--CHMP1A","ENSG00000075407","ENSG00000131165",3.0,2.0,1.0,1.0,0.861,0.00215517241379]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:AL117339.5:38096632:+:9:PIP5K1B:68707603:+:fusion","AL117339.5--PIP5K1B","ENSG00000075407","ENSG00000107242",14.0,1.0,1.0,1.0,0.568,0.00431034482759]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:AL117339.5:38096632:+:9:PIP5K1B:68728765:+:fusion","AL117339.5--PIP5K1B","ENSG00000075407","ENSG00000107242",3.0,1.0,1.0,1.0,0.205,0.0172413793103]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:AL117339.5:38096632:+:9:PIP5K1B:68742501:+:fusion","AL117339.5--PIP5K1B","ENSG00000075407","ENSG00000107242",106.0,1.0,1.0,1.0,0.889957033422228,0.00215517241379]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:AL117339.5:38096632:+:9:PIP5K1B:68818461:+:fusion","AL117339.5--PIP5K1B","ENSG00000075407","ENSG00000107242",84.0,1.0,1.0,1.0,0.74010698609527,0.00431034482759]
["TCGA_BRCA","TCGA-AR-A2LL-01A","10:ZMIZ1:79139777:+:10:AL117339.5:38267280:+:rev","ZMIZ1--AL117339.5","ENSG00000108175","ENSG00000283930",5.0,1.0,1.0,1.0,0.392,0.010775862069]
["TCGA_BRCA","TCGA-AR-A2LM-01A","12:KRAS:25245274:-:12:C2CD5:22454042:-:reg","KRAS--C2CD5","ENSG00000133703","ENSG00000111731",6.0,1.0,1.0,1.0,0.753,0.00530035335689]
["TCGA_BRCA","TCGA-AR-A2LM-01A","12:KRAS:25245274:-:12:C2CD5:22457161:-:reg","KRAS--C2CD5","ENSG00000133703","ENSG00000111731",12.0,1.0,1.0,1.0,0.153,0.0229681978799]
["TCGA_BRCA","TCGA-AR-A2LM-01A","12:RECQL:21486479:-:17:ULK2:19849774:-:fusion","RECQL--ULK2","ENSG00000004700","ENSG00000083290",4.0,1.0,1.0,1.0,0.206,0.0194346289753]
["TCGA_BRCA","TCGA-AR-A2LM-01A","17:ZNF624:16653764:-:12:AC024901.1:19923198:+:fusion","ZNF624--AC024901.1","ENSG00000197566","ENSG00000255910",1.0,1.0,1.0,1.0,0.911,0.0]
["TCGA_BRCA","TCGA-AR-A2LR-01A","16:PKD1:2105322:-:X:AL442647.1:128336372:-:fusion","PKD1--AL442647.1","ENSG00000008710","ENSG00000225689",9.0,1.0,1.0,1.0,0.987,0.0]
["TCGA_BRCA","TCGA-AR-A2LR-01A","16:ZFPM1:88532235:+:X:TEX13D:124335352:+:fusion","ZFPM1--TEX13D","ENSG00000179588","ENSG00000282419",3.0,1.0,1.0,1.0,0.667,0.0136363636364]
["TCGA_BRCA","TCGA-AR-A2LR-01A","8:PVT1:127890998:+:8:CASC8:127420963:-:strandcross","PVT1--CASC8","ENSG00000249859","ENSG00000246228",3.0,1.0,1.0,1.0,0.234,0.0545454545455]
["TCGA_BRCA","TCGA-AR-A2LR-01A","X:TBL1X:9463462:+:X:SH2D1A:124234573:+:reg","TBL1X--SH2D1A","ENSG00000101849","ENSG00000183918",7.0,1.0,1.0,1.0,0.863,0.00454545454545]
["TCGA_BRCA","TCGA-AR-A2LR-01A","X:TBL1X:9465447:+:X:SH2D1A:124234573:+:reg","TBL1X--SH2D1A","ENSG00000101849","ENSG00000183918",17.0,1.0,1.0,1.0,0.267985334935956,0.05]
["TCGA_BRCA","TCGA-AR-A2LR-01A","17:NF1:31095369:+:17:AC005562.1:30607552:+:rev","NF1--AC005562.1","ENSG00000196712","ENSG00000214719",5.0,3.0,1.0,1.0,0.552,"NA"]
["TCGA_BRCA","TCGA-AR-A5QN-01A","8:NSD3:38337305:-:8:AC007991.3:39904021:-:rev","NSD3--AC007991.3","ENSG00000147548","ENSG00000253939",3.0,1.0,1.0,1.0,0.165,0.0278884462151]
["TCGA_BRCA","TCGA-AR-A5QN-01A","16:ZNF213-AS1:3134630:-:16:TRAP1:3666118:-:rev","ZNF213-AS1--TRAP1","ENSG00000263072","ENSG00000126602",2.0,1.0,1.0,1.0,0.8,"NA"]
["TCGA_BRCA","TCGA-AR-A5QQ-01A","6:RPL10A:35468439:+:6:DEF6:35319524:+:rev","RPL10A--DEF6","ENSG00000198755","ENSG00000023892",2.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_BRCA","TCGA-B6-A0I1-01A","11:SIGIRR:417325:-:11:CDHR5:621904:-:rev","SIGIRR--CDHR5","ENSG00000185187","ENSG00000099834",2.0,1.0,1.0,1.0,0.853,"NA"]
["TCGA_BRCA","TCGA-B6-A0I1-01A","20:ZNFX1:49275779:-:20:KCNB1:49298114:-:rev","ZNFX1--KCNB1","ENSG00000124201","ENSG00000158445",2.0,1.0,1.0,1.0,0.575,"NA"]
["TCGA_BRCA","TCGA-B6-A0I1-01A","20:ZNFX1:49275779:-:20:KCNB1:49299383:-:rev","ZNFX1--KCNB1","ENSG00000124201","ENSG00000158445",16.0,1.0,1.0,1.0,0.850165413734622,"NA"]
["TCGA_BRCA","TCGA-B6-A0I2-01A","11:AP002957.1:79092883:+:11:PRSS23:86932695:+:reg","AP002957.1--PRSS23","ENSG00000255345","ENSG00000150687",18.0,1.0,1.0,1.0,0.196723271247785,0.0317073170732]
["TCGA_BRCA","TCGA-B6-A0I2-01A","3:USP13:179690301:+:3:NDUFB5:179614971:+:rev","USP13--NDUFB5","ENSG00000058056","ENSG00000136521",1.0,2.0,2.0,2.0,0.856,"NA"]
["TCGA_BRCA","TCGA-B6-A0I6-01A","1:VAMP3:7777318:+:1:DISP3:11500990:+:reg","VAMP3--DISP3","ENSG00000049245","ENSG00000204624",3.0,1.0,1.0,1.0,0.857,0.00696864111498]
["TCGA_BRCA","TCGA-B6-A0I6-01A","12:ANAPC7:110395101:-:12:ARPC3:110437152:-:rev","ANAPC7--ARPC3","ENSG00000196510","ENSG00000111229",2.0,1.0,2.0,1.0,0.431,"NA"]
["TCGA_BRCA","TCGA-B6-A0I9-01A","11:C11orf84:63819002:+:15:AC092078.1:47949356:+:fusion","C11orf84--AC092078.1","ENSG00000168005","ENSG00000259730",4.0,1.0,1.0,1.0,0.191,0.0136674259681]
["TCGA_BRCA","TCGA-B6-A0I9-01A","11:DENND5A:9206673:-:11:CD44-AS1:35210774:-:rev","DENND5A--CD44-AS1","ENSG00000184014","ENSG00000255443",12.0,1.0,1.0,1.0,0.552,0.00683371298405]
["TCGA_BRCA","TCGA-B6-A0I9-01A","11:FCHSD2:73140031:-:1:NBPF6:108459933:+:fusion","FCHSD2--NBPF6","ENSG00000137478","ENSG00000186086",33.0,1.0,1.0,1.0,0.580122218002199,0.00431034482759]
["TCGA_BRCA","TCGA-B6-A0I9-01A","17:ERBB2:39715939:+:11:AP003419.2:67353077:-:fusion","ERBB2--AP003419.2","ENSG00000141736","ENSG00000175482",2.0,2.0,1.0,1.0,0.753,0.00227790432802]
["TCGA_BRCA","TCGA-B6-A0I9-01A","2:KIAA1211L:98821857:-:2:KANSL3:96631482:-:reg","KIAA1211L--KANSL3","ENSG00000196872","ENSG00000114982",2.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BRCA","TCGA-B6-A0I9-01A","3:NR2C2:14947906:+:20:ACSS2:34913096:+:fusion","NR2C2--ACSS2","ENSG00000177463","ENSG00000131069",3.0,1.0,1.0,1.0,0.654,0.00455580865604]
["TCGA_BRCA","TCGA-B6-A0IA-01A","3:EIF4A2:186784696:+:3:DNAJB11:186582716:+:rev","EIF4A2--DNAJB11","ENSG00000156976","ENSG00000090520",2.0,2.0,2.0,1.0,0.783,"NA"]
["TCGA_BRCA","TCGA-B6-A0IE-01A","1:KLHL21:6595485:-:4:INPP4B:142082185:-:fusion","KLHL21--INPP4B","ENSG00000162413","ENSG00000109452",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BRCA","TCGA-B6-A0IG-01A","12:ITPR2:26427913:-:12:AC087241.1:22618485:+:strandcross","ITPR2--AC087241.1","ENSG00000123104","ENSG00000250166",13.0,1.0,1.0,1.0,0.192,0.0233050847458]
["TCGA_BRCA","TCGA-B6-A0IG-01A","17:TRIM37:59104293:-:17:AC025682.1:47636601:-:reg","TRIM37--AC025682.1","ENSG00000108395","ENSG00000263766",14.0,1.0,1.0,1.0,0.246,0.0190677966102]
["TCGA_BRCA","TCGA-B6-A0IJ-01A","12:TMEM120B:121752223:+:3:BHLHE40-AS1:4900697:-:fusion","TMEM120B--BHLHE40-AS1","ENSG00000188735","ENSG00000235831",4.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-B6-A0IJ-01A","12:TMEM120B:121761738:+:3:BHLHE40-AS1:4900697:-:fusion","TMEM120B--BHLHE40-AS1","ENSG00000188735","ENSG00000235831",53.0,1.0,1.0,1.0,0.830176452258904,0.00344827586207]
["TCGA_BRCA","TCGA-B6-A0IJ-01A","8:PVT1:127989291:+:8:CASC21:127392504:+:rev","PVT1--CASC21","ENSG00000249859","ENSG00000253929",5.0,1.0,2.0,1.0,0.417,"NA"]
["TCGA_BRCA","TCGA-B6-A0IK-01A","17:KANSL1:46223671:-:17:AC004590.1:50627340:-:rev","KANSL1--AC004590.1","ENSG00000120071","ENSG00000251239",5.0,1.0,1.0,1.0,0.358,0.0131578947368]
["TCGA_BRCA","TCGA-B6-A0IK-01A","17:USP32:60345481:-:17:BCAS3:60808004:+:strandcross","USP32--BCAS3","ENSG00000170832","ENSG00000141376",9.0,1.0,1.0,1.0,0.441,0.0131578947368]
["TCGA_BRCA","TCGA-B6-A0IK-01A","8:PVT1:127794734:+:8:NSMCE2:125357219:+:rev","PVT1--NSMCE2","ENSG00000249859","ENSG00000156831",29.0,3.0,2.0,2.0,0.915876468417723,0.00657894736842]
["TCGA_BRCA","TCGA-B6-A0IK-01A","8:PVT1:127796008:+:8:NSMCE2:125357219:+:rev","PVT1--NSMCE2","ENSG00000249859","ENSG00000156831",5.0,2.0,2.0,2.0,0.992,0.0]
["TCGA_BRCA","TCGA-B6-A0IK-01A","8:PVT1:127855319:+:8:NSMCE2:125357219:+:rev","PVT1--NSMCE2","ENSG00000249859","ENSG00000156831",5.0,1.0,1.0,1.0,0.652,0.0131578947368]
["TCGA_BRCA","TCGA-B6-A0IK-01A","5:TBCA:77708242:-:5:AP3B1:78089499:-:rev","TBCA--AP3B1","ENSG00000171530","ENSG00000132842",4.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-B6-A0IM-01A","17:CRLF3:30824523:-:17:AC005697.2:27879107:+:strandcross","CRLF3--AC005697.2","ENSG00000176390","ENSG00000266527",14.0,1.0,1.0,1.0,0.603,0.00883392226148]
["TCGA_BRCA","TCGA-B6-A0IM-01A","6:SYNJ2:157982088:+:6:SNX9:157932195:+:rev","SYNJ2--SNX9","ENSG00000078269","ENSG00000130340",2.0,2.0,1.0,1.0,0.889,"NA"]
["TCGA_BRCA","TCGA-B6-A0IN-01A","17:AP2B1:35627726:+:21:AP000695.1:36480231:+:fusion","AP2B1--AP000695.1","ENSG00000006125","ENSG00000230479",5.0,1.0,1.0,1.0,0.877,0.00255102040816]
["TCGA_BRCA","TCGA-B6-A0IN-01A","17:AP2B1:35627726:+:21:AP000695.2:36531971:+:fusion","AP2B1--AP000695.2","ENSG00000006125","ENSG00000233818",2.0,1.0,1.0,1.0,0.76,0.00510204081633]
["TCGA_BRCA","TCGA-B6-A0IN-01A","17:BPTF:67875020:+:21:AF165147.1:28577380:-:fusion","BPTF--AF165147.1","ENSG00000171634","ENSG00000232855",26.0,1.0,1.0,1.0,0.874700447383653,0.00255102040816]
["TCGA_BRCA","TCGA-B6-A0IO-01A","15:AC087632.1:64380958:-:15:AC110023.1:93760667:+:strandcross","AC087632.1--AC110023.1","ENSG00000259316","ENSG00000258631",6.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_BRCA","TCGA-BH-A0B9-01A","12:AC134511.1:67069050:-:12:STAT6:57108299:-:reg","AC134511.1--STAT6","ENSG00000256248","ENSG00000166888",2.0,1.0,1.0,1.0,0.966,0.00198412698413]
["TCGA_BRCA","TCGA-BH-A0B9-01A","1:RCC1:28508160:+:10:ATP5C1:7796121:+:fusion","RCC1--ATP5C1","ENSG00000180198","ENSG00000165629",3.0,2.0,1.0,1.0,0.39,0.00913242009132]
["TCGA_BRCA","TCGA-BH-A0B9-01A","16:EEF2K:22225975:+:16:C16orf52:22085208:+:rev","EEF2K--C16orf52","ENSG00000103319","ENSG00000185716",2.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","16:GSE1:85171807:+:16:USP10:84733435:+:rev","GSE1--USP10","ENSG00000131149","ENSG00000103194",4.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","17:CASC3:40141607:+:17:PSMD3:39994954:+:rev","CASC3--PSMD3","ENSG00000108349","ENSG00000108344",2.0,1.0,2.0,1.0,0.863,"NA"]
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["TCGA_BRCA","TCGA-BH-A0B9-01A","2:LCLAT1:30447383:+:2:LINC01936:30349937:+:rev","LCLAT1--LINC01936","ENSG00000172954","ENSG00000235997",9.0,2.0,2.0,2.0,0.744,"NA"]
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["TCGA_BRCA","TCGA-BH-A0B9-01A","3:USP13:179690301:+:3:NDUFB5:179614971:+:rev","USP13--NDUFB5","ENSG00000058056","ENSG00000136521",2.0,2.0,2.0,2.0,0.413,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","5:RANBP17:170924550:+:5:KCNIP1:170718758:+:rev","RANBP17--KCNIP1","ENSG00000204764","ENSG00000182132",10.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","6:CASC15:22110920:+:6:CDKAL1:21201110:+:rev","CASC15--CDKAL1","ENSG00000272168","ENSG00000145996",2.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BRCA","TCGA-BH-A0B9-01A","8:RPL7:73292689:-:8:STAU2:73527804:-:rev","RPL7--STAU2","ENSG00000147604","ENSG00000040341",1.0,1.0,1.0,1.0,0.819,"NA"]
["TCGA_BRCA","TCGA-BH-A0BC-01A","11:PCNX3:65620966:+:11:FRMD8:65411242:+:rev","PCNX3--FRMD8","ENSG00000197136","ENSG00000126391",4.0,1.0,1.0,1.0,0.47,"NA"]
["TCGA_BRCA","TCGA-BH-A0BD-01A","11:XRRA1:74848115:-:11:RNF169:74834676:+:strandcross","XRRA1--RNF169","ENSG00000166435","ENSG00000166439",28.0,1.0,1.0,1.0,0.930119947940838,0.0]
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["TCGA_BRCA","TCGA-BH-A0BF-01A","6:THBS2:169241762:-:6:TCTE3:169740295:-:rev","THBS2--TCTE3","ENSG00000186340","ENSG00000184786",2.0,1.0,1.0,1.0,0.929,"NA"]
["TCGA_BRCA","TCGA-BH-A0BG-01A","4:DDX60L:168471747:-:18:OSBPL1A:24181279:-:fusion","DDX60L--OSBPL1A","ENSG00000181381","ENSG00000141447",3.0,1.0,1.0,1.0,0.949,0.0]
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["TCGA_BRCA","TCGA-BH-A0BJ-01A","4:DCTD:182914923:-:4:AC093766.1:138795059:+:strandcross","DCTD--AC093766.1","ENSG00000129187","ENSG00000250501",43.0,1.0,1.0,1.0,0.898337006828254,0.00423728813559]
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["TCGA_BRCA","TCGA-BH-A0BP-01A","19:ZNF256:57947442:-:19:ZNF846:9763408:-:reg","ZNF256--ZNF846","ENSG00000152454","ENSG00000196605",2.0,1.0,1.0,1.0,0.808,0.0]
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["TCGA_BRCA","TCGA-BH-A0BR-01A","12:BTBD11:107544139:+:4:LINC02365:184584602:-:fusion","BTBD11--LINC02365","ENSG00000151136","ENSG00000254233",3.0,1.0,1.0,1.0,0.989,0.0]
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["TCGA_BRCA","TCGA-BH-A0BW-01A","6:SRF:43176667:+:6:FOXP4-AS1:41524225:-:strandcross","SRF--FOXP4-AS1","ENSG00000112658","ENSG00000234753",5.0,1.0,1.0,1.0,0.972,0.0]
["TCGA_BRCA","TCGA-BH-A0BW-01A","18:DLGAP1-AS1:3594240:+:18:TGIF1:3456354:+:rev","DLGAP1-AS1--TGIF1","ENSG00000177337","ENSG00000177426",2.0,1.0,1.0,1.0,0.8,"NA"]
["TCGA_BRCA","TCGA-BH-A0BZ-01A","9:TXN:110250820:-:4:AC106895.2:173925761:-:fusion","TXN--AC106895.2","ENSG00000136810","ENSG00000251216",47.0,1.0,1.0,1.0,0.598139492913962,0.00589970501475]
["TCGA_BRCA","TCGA-BH-A0BZ-01A","1:PTPRF:43609498:+:1:HYI-AS1:43456578:+:rev","PTPRF--HYI-AS1","ENSG00000142949","ENSG00000229348",63.0,1.0,1.0,1.0,0.972875833975683,"NA"]
["TCGA_BRCA","TCGA-BH-A0BZ-01A","20:STMN3:63653327:-:20:ARFRP1:63706738:-:rev","STMN3--ARFRP1","ENSG00000197457","ENSG00000101246",2.0,1.0,1.0,1.0,0.92,"NA"]
["TCGA_BRCA","TCGA-BH-A0BZ-01A","2:ABCA12:214973949:-:2:AC012668.2:215531580:-:rev","ABCA12--AC012668.2","ENSG00000144452","ENSG00000234938",10.0,1.0,1.0,1.0,0.935,"NA"]
["TCGA_BRCA","TCGA-BH-A0C0-01A","1:NOS1AP:162154476:+:1:AL138930.1:160570939:+:rev","NOS1AP--AL138930.1","ENSG00000198929","ENSG00000234425",9.0,1.0,1.0,1.0,0.932,0.0]
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["TCGA_BRCA","TCGA-BH-A0C0-01A","11:MACROD1:64151239:-:11:SF1:64776626:-:rev","MACROD1--SF1","ENSG00000133315","ENSG00000168066",1.0,1.0,2.0,1.0,0.909,"NA"]
["TCGA_BRCA","TCGA-BH-A0C0-01A","11:TMEM135:87091395:+:11:PRSS23:86932695:+:rev","TMEM135--PRSS23","ENSG00000166575","ENSG00000150687",2.0,2.0,3.0,2.0,0.793,"NA"]
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["TCGA_BRCA","TCGA-BH-A0C0-01A","8:PLEKHF2:95134030:+:8:NDUFAF6:95041570:+:rev","PLEKHF2--NDUFAF6","ENSG00000175895","ENSG00000156170",38.0,1.0,1.0,1.0,0.650199710622581,"NA"]
["TCGA_BRCA","TCGA-BH-A0C0-01A","9:RGS3:113498080:+:9:SLC31A1:113256114:+:rev","RGS3--SLC31A1","ENSG00000138835","ENSG00000136868",2.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_BRCA","TCGA-BH-A0C0-01A","9:RGS3:113505523:+:9:SLC31A1:113256114:+:rev","RGS3--SLC31A1","ENSG00000138835","ENSG00000136868",38.0,1.0,1.0,1.0,0.582544268527861,"NA"]
["TCGA_BRCA","TCGA-BH-A0C1-01B","16:BOLA2:29454016:-:16:BCAR4:11820297:-:reg","BOLA2--BCAR4","ENSG00000183336","ENSG00000262117",18.0,1.0,1.0,1.0,0.730341144183939,0.00469483568075]
["TCGA_BRCA","TCGA-BH-A0C7-01B","19:MIER2:344774:-:19:THEG:367224:-:rev","MIER2--THEG","ENSG00000105556","ENSG00000105549",2.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:AC005562.1:30607665:+:12:DNM1L:32742589:+:fusion","AC005562.1--DNM1L","ENSG00000214719","ENSG00000087470",11.0,1.0,1.0,1.0,0.996,0.0]
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["TCGA_BRCA","TCGA-BH-A0DD-01A","17:MSL1:40133109:+:11:LINC01499:41734672:+:fusion","MSL1--LINC01499","ENSG00000188895","ENSG00000255171",141.0,1.0,2.0,1.0,0.518484577300787,0.0262172284644]
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["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SLC39A11:72947731:-:17:AC243829.1:36196130:+:strandcross","SLC39A11--AC243829.1","ENSG00000133195","ENSG00000274767",3.0,1.0,1.0,1.0,0.992,0.0]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SLC39A11:72947731:-:17:CCL4L2:36211776:+:strandcross","SLC39A11--CCL4L2","ENSG00000133195","ENSG00000276070",11.0,2.0,1.0,1.0,0.364,0.0337078651685]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SLC39A11:72947731:-:17:CCL4L2:36212482:+:strandcross","SLC39A11--CCL4L2","ENSG00000133195","ENSG00000276070",9.0,1.0,1.0,1.0,0.604,0.0187265917603]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SLC39A11:72947752:-:11:AP003716.1:67893879:+:fusion","SLC39A11--AP003716.1","ENSG00000133195","ENSG00000251637",2.0,1.0,1.0,1.0,0.953,0.00374531835206]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SLC39A11:72947752:-:17:CCL4L2:36211776:+:strandcross","SLC39A11--CCL4L2","ENSG00000133195","ENSG00000276070",32.0,1.0,1.0,1.0,0.547840657998337,0.0262172284644]
["TCGA_BRCA","TCGA-BH-A0DD-01A","17:SPOP:49601865:-:11:AC068205.1:43640952:+:fusion","SPOP--AC068205.1","ENSG00000121067","ENSG00000283217",4.0,1.0,1.0,1.0,0.612,0.0187265917603]
["TCGA_BRCA","TCGA-BH-A0DE-01A","16:NOL3:67170574:+:5:UBE2D2:139600372:+:fusion","NOL3--UBE2D2","ENSG00000140939","ENSG00000131508",3.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-BH-A0DG-01A","12:AC023796.2:24830789:+:X:GYG2:2881052:+:fusion","AC023796.2--GYG2","ENSG00000256482","ENSG00000056998",61.0,1.0,1.0,1.0,0.904624288588191,0.0]
["TCGA_BRCA","TCGA-BH-A0DG-01A","17:NARF:82472698:+:11:AP001825.1:84800531:+:fusion","NARF--AP001825.1","ENSG00000141562","ENSG00000254787",34.0,1.0,1.0,1.0,0.565913822669468,0.0116618075802]
["TCGA_BRCA","TCGA-BH-A0DG-01A","17:SEPT9:77307197:+:11:AP001825.1:84800531:+:fusion","SEPT9--AP001825.1","ENSG00000184640","ENSG00000254787",11.0,1.0,1.0,1.0,0.689,0.00874635568513]
["TCGA_BRCA","TCGA-BH-A0DG-01A","17:TRIM37:59051214:-:17:CLTC:59644276:+:strandcross","TRIM37--CLTC","ENSG00000108395","ENSG00000141367",5.0,1.0,1.0,1.0,0.338,0.0233236151603]
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["TCGA_BRCA","TCGA-BH-A0DG-01A","16:LITAF:11586886:-:16:BCAR4:11820297:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",13.0,12.0,10.0,9.0,0.995,"NA"]
["TCGA_BRCA","TCGA-BH-A0DG-01A","16:LITAF:11586886:-:16:ZC3H7A:11782388:-:rev","LITAF--ZC3H7A","ENSG00000189067","ENSG00000122299",2.0,5.0,4.0,4.0,0.776,"NA"]
["TCGA_BRCA","TCGA-BH-A0DI-01A","3:MCCC1:183057311:-:3:LINC01206:181971832:+:strandcross","MCCC1--LINC01206","ENSG00000078070","ENSG00000242512",2.0,1.0,1.0,1.0,0.903,0.0059880239521]
["TCGA_BRCA","TCGA-BH-A0DI-01A","3:PHC3:170136419:-:3:TMEM212-AS1:171876396:-:rev","PHC3--TMEM212-AS1","ENSG00000173889","ENSG00000234717",4.0,1.0,1.0,1.0,0.181,0.0299401197605]
["TCGA_BRCA","TCGA-BH-A0DI-01A","3:PLD1:171771195:-:3:KCNMB2-AS1:178749236:-:rev","PLD1--KCNMB2-AS1","ENSG00000075651","ENSG00000237978",4.0,1.0,1.0,1.0,0.877,0.0059880239521]
["TCGA_BRCA","TCGA-BH-A0DK-01A","14:TRAJ45:22493990:+:14:TRAV19:22007881:+:rev","TRAJ45--TRAV19","ENSG00000211844","ENSG00000211799",2.0,1.0,1.0,1.0,0.999,"NA"]
["TCGA_BRCA","TCGA-BH-A0DL-01A","15:ETFA:76311350:-:15:ADPGK:72760527:-:reg","ETFA--ADPGK","ENSG00000140374","ENSG00000159322",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BRCA","TCGA-BH-A0DP-01A","17:PEMT:17576920:-:17:AC069061.2:26991613:-:rev","PEMT--AC069061.2","ENSG00000133027","ENSG00000264734",3.0,1.0,1.0,1.0,0.785,0.00921658986175]
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["TCGA_BRCA","TCGA-BH-A0DV-01A","3:CTNNB1:41199670:+:3:ULK4:41615717:-:strandcross","CTNNB1--ULK4","ENSG00000168036","ENSG00000168038",7.0,6.0,2.0,2.0,1.0,0.0]
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["TCGA_BRCA","TCGA-BH-A0DZ-01A","17:TNFAIP1:28342442:+:17:POLDIP2:28349162:-:strandcross","TNFAIP1--POLDIP2","ENSG00000109079","ENSG00000004142",5.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_BRCA","TCGA-BH-A0E2-01A","2:EHBP1:62874532:+:2:LINC01122:58850430:+:rev","EHBP1--LINC01122","ENSG00000115504","ENSG00000233723",1.0,1.0,1.0,1.0,0.809,0.00323624595469]
["TCGA_BRCA","TCGA-BH-A0E2-01A","2:PAPOLG:60756495:+:14:LINC00871:46438181:+:fusion","PAPOLG--LINC00871","ENSG00000115421","ENSG00000258700",4.0,1.0,1.0,1.0,0.94,0.00323624595469]
["TCGA_BRCA","TCGA-BH-A0E2-01A","2:PAPOLG:60756495:+:14:LINC00871:46449908:+:fusion","PAPOLG--LINC00871","ENSG00000115421","ENSG00000258700",3.0,1.0,1.0,1.0,0.786,0.00323624595469]
["TCGA_BRCA","TCGA-BH-A0E2-01A","2:SPTBN1:54558887:+:2:AC073283.2:47238733:+:rev","SPTBN1--AC073283.2","ENSG00000115306","ENSG00000226087",2.0,1.0,1.0,1.0,0.796,0.00323624595469]
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["TCGA_BRCA","TCGA-BH-A0EA-01A","14:RGS6:71964875:+:14:SIPA1L1:71512743:+:rev","RGS6--SIPA1L1","ENSG00000182732","ENSG00000197555",2.0,1.0,1.0,1.0,0.997,"NA"]
["TCGA_BRCA","TCGA-BH-A0EB-01A","7:NIPSNAP2:55984878:+:7:HDAC9:18162229:+:rev","NIPSNAP2--HDAC9","ENSG00000146729","ENSG00000048052",5.0,1.0,1.0,1.0,0.854,0.006]
["TCGA_BRCA","TCGA-BH-A0EB-01A","5:TNIP1:151087085:-:5:SPARC:151676201:-:rev","TNIP1--SPARC","ENSG00000145901","ENSG00000113140",2.0,1.0,2.0,1.0,0.723,"NA"]
["TCGA_BRCA","TCGA-BH-A0EE-01A","17:VMP1:59707748:+:17:AC015845.2:57772196:-:strandcross","VMP1--AC015845.2","ENSG00000062716","ENSG00000265542",88.0,1.0,1.0,1.0,0.926578402260242,0.0]
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["TCGA_BRCA","TCGA-BH-A0H7-01A","20:ARFGAP1:63272920:+:20:UQCC1:35394196:-:strandcross","ARFGAP1--UQCC1","ENSG00000101199","ENSG00000101019",4.0,1.0,2.0,1.0,0.877,0.0]
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["TCGA_BRCA","TCGA-BH-A0H9-01A","12:AC134511.1:67069050:-:12:SLC16A7:59655152:+:strandcross","AC134511.1--SLC16A7","ENSG00000256248","ENSG00000118596",3.0,1.0,1.0,1.0,0.636,0.0]
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["TCGA_BRCA","TCGA-BH-A0H9-01A","5:ANKHD1:140497278:+:5:CYSTM1:140194446:+:rev","ANKHD1--CYSTM1","ENSG00000131503","ENSG00000120306",10.0,1.0,1.0,1.0,0.588,"NA"]
["TCGA_BRCA","TCGA-BH-A0HB-01A","1:ZC3H11A:203803016:+:1:AC104461.1:200473909:+:rev","ZC3H11A--AC104461.1","ENSG00000058673","ENSG00000230623",18.0,1.0,1.0,1.0,0.848316569074281,0.00418410041841]
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["TCGA_BRCA","TCGA-BH-A0HI-01A","9:DDX58:32526061:-:9:BAG1:33262830:-:rev","DDX58--BAG1","ENSG00000107201","ENSG00000107262",2.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_BRCA","TCGA-BH-A0HL-01A","3:EIF4E3:71728476:-:6:MCHR2-AS1:100000794:+:fusion","EIF4E3--MCHR2-AS1","ENSG00000163412","ENSG00000229315",2.0,1.0,1.0,1.0,0.84,0.00337837837838]
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["TCGA_BRCA","TCGA-BH-A0HX-01A","15:AC037198.1:39594055:-:15:GPR176:39862160:-:rev","AC037198.1--GPR176","ENSG00000259279","ENSG00000166073",2.0,1.0,1.0,1.0,0.884,"NA"]
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["TCGA_BRCA","TCGA-BH-A0W3-01A","11:LRTOMT:72095096:+:11:AP001528.2:86922098:-:strandcross","LRTOMT--AP001528.2","ENSG00000184154","ENSG00000255471",10.0,1.0,1.0,1.0,0.603,0.00581395348837]
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["TCGA_BRCA","TCGA-BH-A0WA-01A","3:ARHGEF26:154129719:+:3:LINC00880:157083275:-:strandcross","ARHGEF26--LINC00880","ENSG00000114790","ENSG00000243629",11.0,1.0,1.0,1.0,0.956,0.0]
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["TCGA_BRCA","TCGA-BH-A0WA-01A","4:ADAMTS3:72548478:-:4:ANKRD17:73177533:-:rev","ADAMTS3--ANKRD17","ENSG00000156140","ENSG00000132466",2.0,1.0,1.0,1.0,0.941,"NA"]
["TCGA_BRCA","TCGA-BH-A0WA-01A","X:SUV39H1:48700753:+:X:WAS:48685547:+:rev","SUV39H1--WAS","ENSG00000101945","ENSG00000015285",1.0,1.0,1.0,1.0,0.902,"NA"]
["TCGA_BRCA","TCGA-BH-A18G-01A","2:IFT172:27477217:-:1:CAPN2:223759270:+:fusion","IFT172--CAPN2","ENSG00000138002","ENSG00000162909",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_BRCA","TCGA-BH-A18J-01A","10:TACC2:122088591:+:10:WDR11-AS1:120776884:-:strandcross","TACC2--WDR11-AS1","ENSG00000138162","ENSG00000227165",12.0,1.0,1.0,1.0,0.99,0.00347222222222]
["TCGA_BRCA","TCGA-BH-A18J-01A","10:TACC2:122113233:+:10:WDR11-AS1:120776884:-:strandcross","TACC2--WDR11-AS1","ENSG00000138162","ENSG00000227165",21.0,1.0,1.0,1.0,0.919233389736688,0.00694444444444]
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["TCGA_BRCA","TCGA-BH-A18K-01A","19:ZNF274:58210073:+:19:MZF1:58563504:-:strandcross","ZNF274--MZF1","ENSG00000171606","ENSG00000099326",17.0,1.0,1.0,1.0,0.872356153673183,0.00331125827815]
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["TCGA_BRCA","TCGA-BH-A18Q-01A","1:GATAD2B:153922733:-:1:TNNI3K:74489189:+:strandcross","GATAD2B--TNNI3K","ENSG00000143614","ENSG00000259030",30.0,1.0,1.0,1.0,0.569198346547188,0.0172910662824]
["TCGA_BRCA","TCGA-BH-A18R-01A","17:AC025048.4:60079472:+:17:ORMDL3:39924225:-:strandcross","AC025048.4--ORMDL3","ENSG00000267416","ENSG00000172057",2.0,1.0,1.0,1.0,0.976,0.0]
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["TCGA_BRCA","TCGA-BH-A18R-01A","17:LIG3:34999856:+:17:AC004408.1:39177204:+:reg","LIG3--AC004408.1","ENSG00000005156","ENSG00000266101",14.0,1.0,1.0,1.0,0.578,0.0201729106628]
["TCGA_BRCA","TCGA-BH-A18R-01A","17:LIG3:35001403:+:17:AC004408.1:39177204:+:reg","LIG3--AC004408.1","ENSG00000005156","ENSG00000266101",30.0,1.0,1.0,1.0,0.509042420570693,0.0230547550432]
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["TCGA_BRCA","TCGA-BH-A18R-01A","17:SKA2:59155131:-:17:CACNG4:67018189:+:strandcross","SKA2--CACNG4","ENSG00000182628","ENSG00000075461",4.0,1.0,1.0,1.0,0.734,0.00576368876081]
["TCGA_BRCA","TCGA-BH-A18R-01A","17:SUZ12:31937520:+:17:USP32:60255258:-:strandcross","SUZ12--USP32","ENSG00000178691","ENSG00000170832",3.0,1.0,1.0,1.0,0.877,0.0]
["TCGA_BRCA","TCGA-BH-A18R-01A","6:C6orf203:107028271:+:8:RP1:54865835:+:fusion","C6orf203--RP1","ENSG00000130349","ENSG00000104237",5.0,1.0,1.0,1.0,0.793,0.00576368876081]
["TCGA_BRCA","TCGA-BH-A18R-01A","6:ESR1:151702005:+:6:CCDC170:151536318:+:rev","ESR1--CCDC170","ENSG00000091831","ENSG00000120262",15.0,4.0,3.0,3.0,0.744,"NA"]
["TCGA_BRCA","TCGA-BH-A18T-01A","2:PRKD3:37324681:-:2:AC011247.1:38496478:-:rev","PRKD3--AC011247.1","ENSG00000115825","ENSG00000231367",4.0,1.0,1.0,1.0,0.193,0.0176470588235]
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["TCGA_BRCA","TCGA-BH-A18T-01A","12:KMT5A:123384208:+:12:C12orf65:123256813:+:rev","KMT5A--C12orf65","ENSG00000183955","ENSG00000130921",5.0,1.0,1.0,1.0,0.484,"NA"]
["TCGA_BRCA","TCGA-BH-A18T-01A","12:PYM1:55927076:-:12:CS:56286645:-:rev","PYM1--CS","ENSG00000170473","ENSG00000062485",3.0,1.0,1.0,1.0,0.596,"NA"]
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["TCGA_BRCA","TCGA-BH-A18T-01A","22:WNT7B:45949920:-:22:AL121672.1:46056515:-:rev","WNT7B--AL121672.1","ENSG00000188064","ENSG00000231010",4.0,1.0,1.0,1.0,0.873,"NA"]
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["TCGA_BRCA","TCGA-BH-A18U-01A","17:AC090844.2:39927814:+:8:NAT1:18170679:+:fusion","AC090844.2--NAT1","ENSG00000264968","ENSG00000171428",11.0,1.0,1.0,1.0,0.882,0.00390625]
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["TCGA_BRCA","TCGA-BH-A204-01A","1:AL357078.1:65067604:-:1:ZRANB2-AS2:71401723:+:strandcross","AL357078.1--ZRANB2-AS2","ENSG00000231485","ENSG00000229956",8.0,1.0,1.0,1.0,0.804,0.00604838709677]
["TCGA_BRCA","TCGA-BH-A204-01A","8:LINC01605:37473078:-:14:NPAS3:33055905:+:fusion","LINC01605--NPAS3","ENSG00000253161","ENSG00000151322",9.0,1.0,1.0,1.0,0.193,0.0282258064516]
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["TCGA_BRCA","TCGA-BH-A208-01A","14:WDR20:102195120:+:14:LINC00605:103188270:-:strandcross","WDR20--LINC00605","ENSG00000140153","ENSG00000251533",3.0,1.0,1.0,1.0,0.855,0.00649350649351]
["TCGA_BRCA","TCGA-BH-A208-01A","1:PRPF3:150338326:+:1:MRPS21:150308048:+:rev","PRPF3--MRPS21","ENSG00000117360","ENSG00000266472",2.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_BRCA","TCGA-BH-A209-01A","19:LSM14A:34172763:+:1:AC104461.1:200473909:+:fusion","LSM14A--AC104461.1","ENSG00000257103","ENSG00000230623",8.0,1.0,1.0,1.0,0.996,0.0]
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["TCGA_BRCA","TCGA-BH-A28Q-01A","22:MYH9:36387807:-:10:PRKG1:51804585:+:fusion","MYH9--PRKG1","ENSG00000100345","ENSG00000185532",3.0,1.0,1.0,1.0,0.864,0.00224215246637]
["TCGA_BRCA","TCGA-BH-A28Q-01A","6:IFNGR1:137219243:-:13:LINC00437:38534020:-:fusion","IFNGR1--LINC00437","ENSG00000027697","ENSG00000236354",19.0,1.0,1.0,1.0,0.860761108536049,0.00224215246637]
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["TCGA_BRCA","TCGA-BH-A42T-01A","11:DPF2:65341562:+:11:TRIM49C:90039865:+:reg","DPF2--TRIM49C","ENSG00000133884","ENSG00000204449",4.0,1.0,1.0,1.0,0.285,0.00381679389313]
["TCGA_BRCA","TCGA-BH-A42T-01A","18:TYMS:662320:+:1:ATP1A1:116403884:+:fusion","TYMS--ATP1A1","ENSG00000176890","ENSG00000163399",2.0,1.0,1.0,1.0,0.756,0.0]
["TCGA_BRCA","TCGA-BH-A5IZ-01A","16:SMG1:18925950:-:12:AC069208.1:24368639:-:fusion","SMG1--AC069208.1","ENSG00000157106","ENSG00000255864",5.0,1.0,1.0,1.0,0.363,0.00663716814159]
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["TCGA_BRCA","TCGA-BH-A8G0-01A","2:HDLBP:241315570:-:2:THAP4:241634079:-:rev","HDLBP--THAP4","ENSG00000115677","ENSG00000176946",2.0,1.0,1.0,1.0,0.534,"NA"]
["TCGA_BRCA","TCGA-C8-A12K-01A","22:TTLL1:43046410:-:22:AL021707.2:38668325:-:reg","TTLL1--AL021707.2","ENSG00000100271","ENSG00000228274",2.0,1.0,1.0,1.0,0.988,0.0]
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["TCGA_BRCA","TCGA-C8-A12K-01A","1:ZNF678:227563724:+:1:LINC01641:227409755:+:rev","ZNF678--LINC01641","ENSG00000181450","ENSG00000234277",13.0,1.0,1.0,1.0,0.998,"NA"]
["TCGA_BRCA","TCGA-C8-A12K-01A","1:ZNF678:227582606:+:1:LINC01641:227409755:+:rev","ZNF678--LINC01641","ENSG00000181450","ENSG00000234277",11.0,1.0,1.0,1.0,0.813,"NA"]
["TCGA_BRCA","TCGA-C8-A12K-01A","2:MEMO1:31943302:-:2:BIRC6-AS2:32557872:-:rev","MEMO1--BIRC6-AS2","ENSG00000162959","ENSG00000279897",2.0,1.0,1.0,1.0,0.574,"NA"]
["TCGA_BRCA","TCGA-C8-A12L-01A","17:ACACA:37330173:-:17:AC011824.2:33581156:+:strandcross","ACACA--AC011824.2","ENSG00000278540","ENSG00000265125",2.0,1.0,1.0,1.0,0.927,0.00248138957816]
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["TCGA_BRCA","TCGA-C8-A12L-01A","17:SPOP:49677933:-:14:IGHV7-81:106874887:-:fusion","SPOP--IGHV7-81","ENSG00000121067","ENSG00000211979",3.0,1.0,1.0,1.0,0.846,0.00248138957816]
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["TCGA_BRCA","TCGA-C8-A12L-01A","19:DPP9:4702027:-:11:KCTD21-AS1:78141595:+:fusion","DPP9--KCTD21-AS1","ENSG00000142002","ENSG00000246174",3.0,1.0,1.0,1.0,0.892,0.00248138957816]
["TCGA_BRCA","TCGA-C8-A12L-01A","2:HK2:74878921:+:2:AC016738.1:100996009:-:strandcross","HK2--AC016738.1","ENSG00000159399","ENSG00000223947",3.0,1.0,1.0,1.0,0.662,0.00248138957816]
["TCGA_BRCA","TCGA-C8-A12L-01A","8:PRKDC:47849154:-:8:DEFB103A:7882423:+:strandcross","PRKDC--DEFB103A","ENSG00000253729","ENSG00000176797",59.0,1.0,1.0,1.0,0.440691151754361,0.0047619047619]
["TCGA_BRCA","TCGA-C8-A12L-01A","11:SIGIRR:408073:-:11:ANO9:430403:-:rev","SIGIRR--ANO9","ENSG00000185187","ENSG00000185101",3.0,1.0,1.0,1.0,0.568,"NA"]
["TCGA_BRCA","TCGA-C8-A12M-01A","17:ARSG:68401450:+:17:AC005544.1:67020271:-:strandcross","ARSG--AC005544.1","ENSG00000141337","ENSG00000264491",46.0,1.0,1.0,1.0,0.941287216705314,0.00293255131965]
["TCGA_BRCA","TCGA-C8-A12M-01A","X:AKAP17A:1591769:+:X:P2RY8:1466582:-:strandcross","AKAP17A--P2RY8","ENSG00000197976","ENSG00000182162",9.0,1.0,1.0,1.0,0.554,0.0117302052786]
["TCGA_BRCA","TCGA-C8-A12M-01A","X:ASMTL:1452748:-:X:CSF2RA:1282678:+:strandcross","ASMTL--CSF2RA","ENSG00000169093","ENSG00000198223",10.0,1.0,1.0,1.0,0.947,0.00293255131965]
["TCGA_BRCA","TCGA-C8-A12M-01A","20:POLR3F:18481810:+:20:MGME1:17989939:+:rev","POLR3F--MGME1","ENSG00000132664","ENSG00000125871",3.0,1.0,1.0,1.0,0.649,"NA"]
["TCGA_BRCA","TCGA-C8-A12M-01A","8:MSRA:10207901:+:8:TNKS:9704663:+:rev","MSRA--TNKS","ENSG00000175806","ENSG00000173273",2.0,1.0,1.0,1.0,0.814,"NA"]
["TCGA_BRCA","TCGA-C8-A12N-01A","13:GGACT:100583825:-:13:PCCA:100368472:+:strandcross","GGACT--PCCA","ENSG00000134864","ENSG00000175198",4.0,2.0,2.0,2.0,1.0,0.0]
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["TCGA_BRCA","TCGA-C8-A12Q-01A","1:CAPZB:19485436:-:1:OTUD3:19890385:+:strandcross","CAPZB--OTUD3","ENSG00000077549","ENSG00000169914",3.0,1.0,1.0,1.0,0.702,0.010498687664]
["TCGA_BRCA","TCGA-C8-A12Q-01A","16:IST1:71895589:+:16:AC009097.1:71663906:+:rev","IST1--AC009097.1","ENSG00000182149","ENSG00000260185",1.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_BRCA","TCGA-C8-A12Q-01A","9:SCAI:125142633:-:9:MAPKAP1:125543168:-:rev","SCAI--MAPKAP1","ENSG00000173611","ENSG00000119487",4.0,1.0,1.0,1.0,0.595,"NA"]
["TCGA_BRCA","TCGA-C8-A12U-01A","6:TFEB:41735350:-:2:LINC01886:107555133:+:fusion","TFEB--LINC01886","ENSG00000112561","ENSG00000224568",4.0,1.0,1.0,1.0,0.311,0.0366972477064]
["TCGA_BRCA","TCGA-C8-A12V-01A","8:DDHD2:38233214:+:8:ASH2L:38114192:+:rev","DDHD2--ASH2L","ENSG00000085788","ENSG00000129691",2.0,1.0,1.0,1.0,0.742,"NA"]
["TCGA_BRCA","TCGA-C8-A12Z-01A","8:PVT1:127855319:+:8:AC027419.2:117129911:+:rev","PVT1--AC027419.2","ENSG00000249859","ENSG00000253622",4.0,1.0,1.0,1.0,0.596,0.00925925925926]
["TCGA_BRCA","TCGA-C8-A130-01A","21:C2CD2:41942147:-:21:AP000695.2:36531971:+:strandcross","C2CD2--AP000695.2","ENSG00000157617","ENSG00000233818",2.0,1.0,1.0,1.0,0.975,0.0]
["TCGA_BRCA","TCGA-C8-A134-01A","6:TULP4:158232303:+:6:GTF2H5:158191977:+:rev","TULP4--GTF2H5","ENSG00000130338","ENSG00000272047",15.0,5.0,3.0,3.0,0.994,"NA"]
["TCGA_BRCA","TCGA-C8-A138-01A","17:BRIP1:61847101:-:17:AC005144.1:71830240:-:rev","BRIP1--AC005144.1","ENSG00000136492","ENSG00000283517",2.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-C8-A1HI-01A","15:GNB5:52141140:-:17:ZNF652:49317983:-:fusion","GNB5--ZNF652","ENSG00000069966","ENSG00000198740",3.0,1.0,1.0,1.0,0.69,0.00418410041841]
["TCGA_BRCA","TCGA-C8-A1HI-01A","15:IGF1R:98708107:+:15:AC015574.1:95730364:+:rev","IGF1R--AC015574.1","ENSG00000140443","ENSG00000275016",4.0,1.0,1.0,1.0,0.949,0.0]
["TCGA_BRCA","TCGA-C8-A1HJ-01A","1:KIRREL:157993728:+:15:AC087762.1:100819414:+:fusion","KIRREL--AC087762.1","ENSG00000183853","ENSG00000259579",2.0,1.0,1.0,1.0,0.652,0.00373134328358]
["TCGA_BRCA","TCGA-C8-A1HL-01A","17:MED1:39419717:-:17:LINC00469:73761026:-:rev","MED1--LINC00469","ENSG00000125686","ENSG00000177338",2.0,1.0,1.0,1.0,0.623,0.00684931506849]
["TCGA_BRCA","TCGA-C8-A1HN-01A","3:RPL24:101682429:-:3:AC110491.3:97818503:-:reg","RPL24--AC110491.3","ENSG00000114391","ENSG00000282527",3.0,1.0,1.0,1.0,0.674,0.0135135135135]
["TCGA_BRCA","TCGA-C8-A1HO-01A","8:ADAM32:39246166:+:8:AC124290.1:36004592:-:strandcross","ADAM32--AC124290.1","ENSG00000197140","ENSG00000253524",4.0,1.0,1.0,1.0,0.831,0.00371747211896]
["TCGA_BRCA","TCGA-C8-A26Y-01A","2:FANCL:58198594:-:2:AC007100.1:59827271:-:rev","FANCL--AC007100.1","ENSG00000115392","ENSG00000271955",1.0,1.0,1.0,1.0,0.779,0.00647948164147]
["TCGA_BRCA","TCGA-C8-A26Z-01A","6:UTRN:144678578:+:6:HBS1L:135002842:-:strandcross","UTRN--HBS1L","ENSG00000152818","ENSG00000112339",2.0,1.0,1.0,1.0,0.992,0.00400801603206]
["TCGA_BRCA","TCGA-C8-A275-01A","17:SSH2:29929938:-:17:VMP1:59838295:+:strandcross","SSH2--VMP1","ENSG00000141298","ENSG00000062716",3.0,1.0,1.0,1.0,0.842,0.002886002886]
["TCGA_BRCA","TCGA-C8-A278-01A","1:NFIA:61359274:+:1:AC099792.1:60826585:-:strandcross","NFIA--AC099792.1","ENSG00000162599","ENSG00000231252",6.0,1.0,1.0,1.0,0.973,0.0]
["TCGA_BRCA","TCGA-C8-A27A-01A","8:STK3:98767243:-:8:BAALC-AS1:103157038:-:rev","STK3--BAALC-AS1","ENSG00000104375","ENSG00000247081",3.0,1.0,1.0,1.0,0.32,0.027027027027]
["TCGA_BRCA","TCGA-C8-A8HR-01A","1:PUM1:31065616:-:8:LINC00824:128561126:-:fusion","PUM1--LINC00824","ENSG00000134644","ENSG00000254275",10.0,1.0,1.0,1.0,0.8,0.00684931506849]
["TCGA_BRCA","TCGA-D8-A13Z-01A","5:PCDHA5:140824127:+:5:ANKHD1:140513363:+:rev","PCDHA5--ANKHD1","ENSG00000204965","ENSG00000131503",2.0,1.0,1.0,1.0,0.839,"NA"]
["TCGA_BRCA","TCGA-D8-A140-01A","12:AC134511.1:67069050:-:12:MSRB3:65368998:+:strandcross","AC134511.1--MSRB3","ENSG00000256248","ENSG00000174099",10.0,1.0,1.0,1.0,0.622,0.0151515151515]
["TCGA_BRCA","TCGA-D8-A140-01A","7:NRF1:129657574:+:7:STRIP2:129451613:+:rev","NRF1--STRIP2","ENSG00000106459","ENSG00000128578",6.0,1.0,1.0,1.0,0.53,"NA"]
["TCGA_BRCA","TCGA-D8-A143-01A","11:ARHGEF12:120477526:+:3:LINC00885:196159900:+:fusion","ARHGEF12--LINC00885","ENSG00000196914","ENSG00000224652",3.0,1.0,1.0,1.0,0.941,0.0]
["TCGA_BRCA","TCGA-D8-A147-01A","16:C16orf52:22008407:+:10:LINC00839:42486979:+:fusion","C16orf52--LINC00839","ENSG00000185716","ENSG00000185904",15.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_BRCA","TCGA-D8-A1J9-01A","17:TADA2A:37444768:+:17:AC079336.2:32510852:-:strandcross","TADA2A--AC079336.2","ENSG00000276234","ENSG00000265222",6.0,1.0,1.0,1.0,0.256,0.0126050420168]
["TCGA_BRCA","TCGA-D8-A1JC-01A","11:GUCY1A2:106978619:-:11:CWF19L2:107433749:-:rev","GUCY1A2--CWF19L2","ENSG00000152402","ENSG00000152404",2.0,1.0,1.0,1.0,0.789,"NA"]
["TCGA_BRCA","TCGA-D8-A1JG-01B","11:DEAF1:674536:-:11:GATD1:775142:-:rev","DEAF1--GATD1","ENSG00000177030","ENSG00000177225",5.0,1.0,1.0,1.0,0.921,"NA"]
["TCGA_BRCA","TCGA-D8-A1JL-01A","8:RBM12B:93740881:-:8:CDH17:94194705:-:rev","RBM12B--CDH17","ENSG00000183808","ENSG00000079112",2.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_BRCA","TCGA-D8-A1JM-01A","9:TMEM2:71722427:-:9:ABHD17B:71867006:-:rev","TMEM2--ABHD17B","ENSG00000135048","ENSG00000107362",1.0,1.0,1.0,1.0,0.962,"NA"]
["TCGA_BRCA","TCGA-D8-A1X6-01A","10:ZMIZ1:79216274:+:10:AC012560.1:78674689:+:rev","ZMIZ1--AC012560.1","ENSG00000108175","ENSG00000282863",16.0,2.0,1.0,1.0,0.834792205568939,"NA"]
["TCGA_BRCA","TCGA-D8-A1XD-01A","19:MYH14:50263420:+:20:AL031674.1:52681405:+:fusion","MYH14--AL031674.1","ENSG00000105357","ENSG00000232294",2.0,1.0,1.0,1.0,0.58,0.0204081632653]
["TCGA_BRCA","TCGA-D8-A1XJ-01A","16:NKD1:50549555:+:16:AC105411.1:80156007:-:strandcross","NKD1--AC105411.1","ENSG00000140807","ENSG00000259867",13.0,1.0,1.0,1.0,0.415,0.0215384615385]
["TCGA_BRCA","TCGA-D8-A1XJ-01A","17:STARD3:39653750:+:17:CDK12:39564760:+:rev","STARD3--CDK12","ENSG00000131748","ENSG00000167258",9.0,1.0,1.0,1.0,0.816,"NA"]
["TCGA_BRCA","TCGA-D8-A1XO-01A","6:PKIB:122610535:+:18:ZADH2:75202340:-:fusion","PKIB--ZADH2","ENSG00000135549","ENSG00000180011",1.0,1.0,1.0,1.0,0.913,0.0]
["TCGA_BRCA","TCGA-D8-A1XO-01A","3:RBM6:49962685:+:3:DAG1:49488626:+:rev","RBM6--DAG1","ENSG00000004534","ENSG00000173402",2.0,1.0,1.0,1.0,0.852,"NA"]
["TCGA_BRCA","TCGA-D8-A1XR-01A","14:ZFP36L1:68796075:-:14:ACTN1:68883055:-:rev","ZFP36L1--ACTN1","ENSG00000185650","ENSG00000072110",2.0,1.0,1.0,1.0,0.665,"NA"]
["TCGA_BRCA","TCGA-D8-A1XY-01A","12:LINC01481:70242797:-:12:ANKS1B:99655210:-:rev","LINC01481--ANKS1B","ENSG00000257815","ENSG00000185046",2.0,1.0,1.0,1.0,0.763,0.005]
["TCGA_BRCA","TCGA-D8-A1XZ-01A","14:ANG:20684758:+:14:CMA1:24507506:-:strandcross","ANG--CMA1","ENSG00000258818","ENSG00000092009",3.0,1.0,1.0,1.0,0.951,0.00358422939068]
["TCGA_BRCA","TCGA-D8-A1Y3-01A","8:TPD52:80171425:-:8:AC073023.1:110344595:-:rev","TPD52--AC073023.1","ENSG00000076554","ENSG00000253956",2.0,1.0,1.0,1.0,0.927,0.00263157894737]
["TCGA_BRCA","TCGA-D8-A27H-01A","8:ARFGEF1:67343164:-:8:AC090155.2:49496975:-:reg","ARFGEF1--AC090155.2","ENSG00000066777","ENSG00000253380",3.0,1.0,1.0,1.0,0.826,0.00733496332518]
["TCGA_BRCA","TCGA-D8-A27M-01A","2:LRP2:169142674:-:12:AC138123.2:93128126:-:fusion","LRP2--AC138123.2","ENSG00000081479","ENSG00000257322",12.0,1.0,1.0,1.0,0.926,0.0]
["TCGA_BRCA","TCGA-D8-A27N-01A","17:KPNB1:47650444:+:17:SOX9-AS1:72045524:-:strandcross","KPNB1--SOX9-AS1","ENSG00000108424","ENSG00000234899",4.0,1.0,1.0,1.0,0.91,0.00263852242744]
["TCGA_BRCA","TCGA-D8-A27R-01A","12:ZNF385A:54384428:-:12:ITGA5:54403050:-:rev","ZNF385A--ITGA5","ENSG00000161642","ENSG00000161638",2.0,1.0,1.0,1.0,0.734,"NA"]
["TCGA_BRCA","TCGA-D8-A27V-01A","17:YPEL2:59331824:+:17:LINC01483:69594787:+:reg","YPEL2--LINC01483","ENSG00000175155","ENSG00000227517",9.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BRCA","TCGA-E2-A105-01A","8:NCOA2:70296744:-:8:LINC00534:90454409:+:strandcross","NCOA2--LINC00534","ENSG00000140396","ENSG00000253394",8.0,1.0,1.0,1.0,0.984,0.0]
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["TCGA_BRCA","TCGA-E2-A10A-01A","12:WBP11:14803352:-:12:AC010197.1:21759914:+:strandcross","WBP11--AC010197.1","ENSG00000084463","ENSG00000256615",3.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_BRCA","TCGA-E2-A10A-01A","1:GNG12-AS1:68071873:+:1:ITGB3BP:63529186:-:strandcross","GNG12-AS1--ITGB3BP","ENSG00000232284","ENSG00000142856",5.0,1.0,1.0,1.0,0.177,0.0384615384615]
["TCGA_BRCA","TCGA-E2-A14P-01A","17:MED13:61982198:-:17:BIRC5:78214680:+:strandcross","MED13--BIRC5","ENSG00000108510","ENSG00000089685",2.0,1.0,1.0,1.0,0.332,0.0192307692308]
["TCGA_BRCA","TCGA-E2-A14P-01A","8:TSNARE1:142403104:-:8:LYNX1:142776121:-:rev","TSNARE1--LYNX1","ENSG00000171045","ENSG00000284505",4.0,1.0,1.0,1.0,0.55,"NA"]
["TCGA_BRCA","TCGA-E2-A14S-01A","11:ADAMTS15:130449930:+:20:AL353653.1:50653946:+:fusion","ADAMTS15--AL353653.1","ENSG00000166106","ENSG00000234693",140.0,1.0,1.0,1.0,0.232417888254033,0.0287206266319]
["TCGA_BRCA","TCGA-E2-A14T-01A","12:EIF4B:53020026:+:12:LINC01490:80763590:+:reg","EIF4B--LINC01490","ENSG00000063046","ENSG00000257741",12.0,1.0,1.0,1.0,0.304,0.0212765957447]
["TCGA_BRCA","TCGA-E2-A14T-01A","1:ZCCHC11:52552931:-:17:AC015802.4:76551163:-:fusion","ZCCHC11--AC015802.4","ENSG00000134744","ENSG00000267546",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_BRCA","TCGA-E2-A14T-01A","2:XPO1:61522611:-:2:CCT4:61869553:-:rev","XPO1--CCT4","ENSG00000082898","ENSG00000115484",1.0,1.0,1.0,1.0,0.835,"NA"]
["TCGA_BRCA","TCGA-E2-A14W-01A","19:AC008894.1:16104101:-:2:IGFBP2:216663940:+:fusion","AC008894.1--IGFBP2","ENSG00000267373","ENSG00000115457",3.0,2.0,1.0,1.0,0.632,0.0119047619048]
["TCGA_BRCA","TCGA-E2-A14Z-01A","2:PNKD:218323431:+:2:AC122136.1:215870264:+:rev","PNKD--AC122136.1","ENSG00000127838","ENSG00000227824",7.0,1.0,1.0,1.0,0.881,0.00719424460432]
["TCGA_BRCA","TCGA-E2-A150-01A","12:SLC11A2:51026315:-:12:CSRNP2:51076647:-:rev","SLC11A2--CSRNP2","ENSG00000110911","ENSG00000110925",1.0,1.0,1.0,1.0,0.847,"NA"]
["TCGA_BRCA","TCGA-E2-A155-01A","17:NLE1:35137543:-:17:AC068675.1:43590088:+:strandcross","NLE1--AC068675.1","ENSG00000073536","ENSG00000267747",4.0,1.0,1.0,1.0,0.394,0.0243055555556]
["TCGA_BRCA","TCGA-E2-A158-01A","6:GMDS-AS1:2263684:+:6:BMP6:7861451:+:reg","GMDS-AS1--BMP6","ENSG00000250903","ENSG00000153162",5.0,1.0,1.0,1.0,0.83,0.00287356321839]
["TCGA_BRCA","TCGA-E2-A15A-01A","14:PPP4R3A:91509506:-:3:AC026167.1:6365729:+:fusion","PPP4R3A--AC026167.1","ENSG00000100796","ENSG00000226022",4.0,2.0,2.0,2.0,0.719,0.00849858356941]
["TCGA_BRCA","TCGA-E2-A15A-01A","19:ZNF583:56407123:+:19:ZNF582-AS1:56397881:+:rev","ZNF583--ZNF582-AS1","ENSG00000198440","ENSG00000267454",1.0,1.0,1.0,1.0,0.934,"NA"]
["TCGA_BRCA","TCGA-E2-A15A-06A","8:KAT6A:42048378:-:8:AC124067.1:37480089:+:strandcross","KAT6A--AC124067.1","ENSG00000083168","ENSG00000253388",18.0,2.0,2.0,2.0,0.840000493721907,0.00374531835206]
["TCGA_BRCA","TCGA-E2-A15H-01A","17:USP32:60265412:-:17:LINC00511:72431224:-:rev","USP32--LINC00511","ENSG00000170832","ENSG00000227036",15.0,1.0,1.0,1.0,0.894,0.0]
["TCGA_BRCA","TCGA-E2-A15M-01A","6:ESR1:151702005:+:7:PHF14:11111350:+:fusion","ESR1--PHF14","ENSG00000091831","ENSG00000106443",3.0,1.0,1.0,1.0,0.329,0.004329004329]
["TCGA_BRCA","TCGA-E2-A15P-01A","14:AL132639.3:39279537:+:14:LINC02325:97557417:+:reg","AL132639.3--LINC02325","ENSG00000258941","ENSG00000246084",3.0,1.0,1.0,1.0,0.751,0.00621118012422]
["TCGA_BRCA","TCGA-E2-A15T-01A","19:MED25:49819296:+:19:TRPM4:49200300:+:rev","MED25--TRPM4","ENSG00000104973","ENSG00000130529",2.0,1.0,1.0,1.0,0.984,"NA"]
["TCGA_BRCA","TCGA-E2-A1B0-01A","8:TRPS1:115587001:-:8:C8orf34-AS1:68304801:-:reg","TRPS1--C8orf34-AS1","ENSG00000104447","ENSG00000248801",10.0,1.0,1.0,1.0,0.973,0.00159489633174]
["TCGA_BRCA","TCGA-E2-A1B0-01A","1:NUCKS1:205749957:-:1:SLC26A9:205933084:-:rev","NUCKS1--SLC26A9","ENSG00000069275","ENSG00000174502",6.0,1.0,1.0,1.0,0.636,"NA"]
["TCGA_BRCA","TCGA-E2-A1B6-01A","18:DYM:49391593:-:18:RPL17-C18orf32:49483771:-:rev","DYM--RPL17-C18orf32","ENSG00000141627","ENSG00000177576",2.0,2.0,3.0,2.0,0.608,"NA"]
["TCGA_BRCA","TCGA-E2-A1IH-01A","8:AC105999.2:40343278:-:8:AC131254.1:29845451:-:reg","AC105999.2--AC131254.1","ENSG00000253802","ENSG00000248964",4.0,1.0,1.0,1.0,0.916,0.00508905852417]
["TCGA_BRCA","TCGA-E2-A1IU-01A","11:SPCS2:74949399:+:11:PAK1:77340763:-:strandcross","SPCS2--PAK1","ENSG00000118363","ENSG00000149269",15.0,1.0,1.0,1.0,0.8,0.011673151751]
["TCGA_BRCA","TCGA-E2-A1L8-01A","12:TBC1D15:71839811:+:7:OSBPL3:24800279:-:fusion","TBC1D15--OSBPL3","ENSG00000121749","ENSG00000070882",7.0,1.0,1.0,1.0,0.77,0.00526315789474]
["TCGA_BRCA","TCGA-E2-A1L8-01A","4:ZNF827:145902166:-:4:SLC10A7:146510049:-:rev","ZNF827--SLC10A7","ENSG00000151612","ENSG00000120519",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_BRCA","TCGA-E2-A1LE-01A","2:METAP1D:172000009:+:17:ENPP7:79733508:+:fusion","METAP1D--ENPP7","ENSG00000172878","ENSG00000182156",3.0,1.0,1.0,1.0,0.863,0.00444444444444]
["TCGA_BRCA","TCGA-E2-A1LH-01A","17:YWHAE:1400047:-:22:Z83851.1:42276696:+:fusion","YWHAE--Z83851.1","ENSG00000108953","ENSG00000233903",9.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-E2-A1LL-01A","14:STON2:81370988:-:14:LINC02308:81442442:-:rev","STON2--LINC02308","ENSG00000140022","ENSG00000258675",69.0,1.0,1.0,1.0,0.974642945001518,"NA"]
["TCGA_BRCA","TCGA-E2-A2P6-01A","11:VPS37C:61161391:-:11:AP002370.2:83684449:+:strandcross","VPS37C--AP002370.2","ENSG00000167987","ENSG00000255311",4.0,1.0,1.0,1.0,0.175,0.0152091254753]
["TCGA_BRCA","TCGA-E2-A576-01A","4:RHOH:40197300:+:21:AP001172.1:16292148:-:fusion","RHOH--AP001172.1","ENSG00000168421","ENSG00000270071",5.0,1.0,1.0,1.0,0.428,0.0102301790281]
["TCGA_BRCA","TCGA-E9-A1N6-01A","20:ZBTB46:63775678:-:11:ZDHHC5:57672021:+:fusion","ZBTB46--ZDHHC5","ENSG00000130584","ENSG00000156599",3.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_BRCA","TCGA-E9-A1N9-01A","22:MICAL3:17816690:-:2:MEMO1:31869952:-:fusion","MICAL3--MEMO1","ENSG00000243156","ENSG00000162959",3.0,1.0,1.0,1.0,0.228,0.0170068027211]
["TCGA_BRCA","TCGA-E9-A1NA-01A","1:LAMC1:183024134:+:1:MR1:181049052:+:rev","LAMC1--MR1","ENSG00000135862","ENSG00000153029",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_BRCA","TCGA-E9-A1NA-01A","7:IQCE:2559217:+:7:AC226118.1:380418:+:rev","IQCE--AC226118.1","ENSG00000106012","ENSG00000249574",2.0,1.0,1.0,1.0,0.374,0.0135869565217]
["TCGA_BRCA","TCGA-E9-A1NE-01A","18:RPRD1A:36067254:-:18:AC023043.1:36180390:-:rev","RPRD1A--AC023043.1","ENSG00000141425","ENSG00000260552",11.0,2.0,2.0,2.0,0.455,"NA"]
["TCGA_BRCA","TCGA-E9-A1NF-01A","4:SHROOM3:76436220:+:6:AL138826.1:50098712:+:fusion","SHROOM3--AL138826.1","ENSG00000138771","ENSG00000226733",4.0,1.0,1.0,1.0,0.892,0.0]
["TCGA_BRCA","TCGA-E9-A1R4-01A","10:MICU1:72626010:-:10:ANXA7:73400857:-:rev","MICU1--ANXA7","ENSG00000107745","ENSG00000138279",1.0,1.0,1.0,1.0,0.915,"NA"]
["TCGA_BRCA","TCGA-E9-A1RB-01A","10:AL731577.2:124917272:+:1:TAF12:28622165:-:fusion","AL731577.2--TAF12","ENSG00000249456","ENSG00000120656",38.0,1.0,2.0,1.0,0.945256435014479,0.0]
["TCGA_BRCA","TCGA-E9-A1RB-01A","11:STIM1:4055637:+:15:AC100826.1:69565288:-:fusion","STIM1--AC100826.1","ENSG00000167323","ENSG00000259457",8.0,1.0,1.0,1.0,0.534,0.0078125]
["TCGA_BRCA","TCGA-E9-A1RB-01A","21:BRWD1:39298432:-:21:HMGN1:39345274:-:rev","BRWD1--HMGN1","ENSG00000185658","ENSG00000205581",2.0,3.0,2.0,1.0,0.677,"NA"]
["TCGA_BRCA","TCGA-E9-A1RF-01A","17:TMEM105:81330144:-:17:TBC1D16:79952818:-:reg","TMEM105--TBC1D16","ENSG00000185332","ENSG00000167291",2.0,1.0,1.0,1.0,0.878,0.00529100529101]
["TCGA_BRCA","TCGA-E9-A1RH-01A","20:NCOA3:47583261:+:6:PRIM2:57532411:+:fusion","NCOA3--PRIM2","ENSG00000124151","ENSG00000146143",15.0,1.0,1.0,1.0,0.188,0.0]
["TCGA_BRCA","TCGA-E9-A22A-01A","12:CHD4:6573074:-:12:PHB2:6965712:-:rev","CHD4--PHB2","ENSG00000111642","ENSG00000215021",2.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_BRCA","TCGA-E9-A22D-01A","1:VPS72:151185798:-:X:NLGN4X:6151771:-:fusion","VPS72--NLGN4X","ENSG00000163159","ENSG00000146938",5.0,1.0,1.0,1.0,0.817,0.00260078023407]
["TCGA_BRCA","TCGA-E9-A22G-01A","1:SNHG3:28508160:+:17:BIRC5:78216664:+:fusion","SNHG3--BIRC5","ENSG00000180198","ENSG00000089685",2.0,1.0,1.0,1.0,0.776,0.00566037735849]
["TCGA_BRCA","TCGA-E9-A244-01A","14:SUSD6:69611828:+:14:ARG2:67642186:+:rev","SUSD6--ARG2","ENSG00000100647","ENSG00000081181",3.0,1.0,1.0,1.0,0.745,0.00842696629213]
["TCGA_BRCA","TCGA-E9-A247-01A","5:CTNND2:11903817:-:5:AC092343.1:59063085:+:strandcross","CTNND2--AC092343.1","ENSG00000169862","ENSG00000247345",12.0,1.0,1.0,1.0,0.316,0.0297619047619]
["TCGA_BRCA","TCGA-E9-A248-01A","6:AL080276.2:152983805:+:6:SERINC1:122458681:-:strandcross","AL080276.2--SERINC1","ENSG00000227627","ENSG00000111897",5.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_BRCA","TCGA-E9-A3X8-01A","16:METTL9:21625115:+:X:CASK:41745601:-:fusion","METTL9--CASK","ENSG00000197006","ENSG00000147044",3.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_BRCA","TCGA-E9-A5FK-01A","4:PLAC8:83114666:-:4:RPL9:39456538:-:reg","PLAC8--RPL9","ENSG00000145287","ENSG00000163682",3.0,1.0,1.0,1.0,0.166,0.01]
["TCGA_BRCA","TCGA-EW-A1IX-01A","1:TBCE:235414618:+:4:SLIT2:20553805:+:fusion","TBCE--SLIT2","ENSG00000116957","ENSG00000145147",2.0,1.0,1.0,1.0,0.476,0.0158227848101]
["TCGA_BRCA","TCGA-EW-A1IY-01A","14:SCFD1:30653588:+:14:G2E3:30581076:+:rev","SCFD1--G2E3","ENSG00000092108","ENSG00000092140",2.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_BRCA","TCGA-EW-A1J5-01A","22:PHF21B:45008545:-:22:NUP50-AS1:45138916:-:rev","PHF21B--NUP50-AS1","ENSG00000056487","ENSG00000226328",2.0,2.0,1.0,1.0,0.787,"NA"]
["TCGA_BRCA","TCGA-EW-A1OW-01A","1:RNF220:44649957:+:1:TMEM53:44655119:-:strandcross","RNF220--TMEM53","ENSG00000187147","ENSG00000126106",6.0,1.0,1.0,1.0,0.776,0.0]
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["TCGA_BRCA","TCGA-EW-A1PB-01A","19:GATAD2A:19406019:+:19:MAU2:19354355:+:rev","GATAD2A--MAU2","ENSG00000167491","ENSG00000129933",8.0,1.0,1.0,1.0,0.866,"NA"]
["TCGA_BRCA","TCGA-EW-A1PG-01A","19:KANK3:8343225:-:19:RAB11B-AS1:8377067:-:rev","KANK3--RAB11B-AS1","ENSG00000186994","ENSG00000269386",3.0,1.0,1.0,1.0,0.876,"NA"]
["TCGA_BRCA","TCGA-EW-A1PH-01A","3:STAG1:136623146:-:7:ISPD-AS1:16266227:+:fusion","STAG1--ISPD-AS1","ENSG00000118007","ENSG00000229688",8.0,1.0,1.0,1.0,0.508,0.00714285714286]
["TCGA_BRCA","TCGA-EW-A2FS-01A","6:MBOAT1:20212136:-:6:LINC01564:53628575:+:strandcross","MBOAT1--LINC01564","ENSG00000172197","ENSG00000235899",3.0,1.0,1.0,1.0,0.434,0.0155440414508]
["TCGA_BRCA","TCGA-EW-A2FW-01A","20:CSE1L:49058548:+:20:LINC01440:55468091:+:reg","CSE1L--LINC01440","ENSG00000124207","ENSG00000235166",6.0,1.0,1.0,1.0,0.354,0.010498687664]
["TCGA_BRCA","TCGA-EW-A3E8-01B","2:PIGF:46592475:-:2:LINC01122:58930636:+:strandcross","PIGF--LINC01122","ENSG00000151665","ENSG00000233723",5.0,1.0,1.0,1.0,0.269,0.0108108108108]
["TCGA_BRCA","TCGA-EW-A3U0-01A","3:CBLB:105867410:-:3:LINC00882:106927994:-:rev","CBLB--LINC00882","ENSG00000114423","ENSG00000242759",3.0,1.0,1.0,1.0,0.269,0.0189873417722]
["TCGA_BRCA","TCGA-EW-A3U0-01A","9:CAMSAP1:135907000:-:9:CCDC187:136266043:-:rev","CAMSAP1--CCDC187","ENSG00000130559","ENSG00000260220",1.0,1.0,1.0,1.0,0.827,"NA"]
["TCGA_BRCA","TCGA-EW-A6SB-01A","1:MOV10:112698789:+:1:AL355488.1:110318882:-:strandcross","MOV10--AL355488.1","ENSG00000155363","ENSG00000227963",12.0,1.0,1.0,1.0,0.748,0.00518134715026]
["TCGA_BRCA","TCGA-EW-A6SD-01A","4:PPARGC1A:23884752:-:4:AC097512.1:23003150:+:strandcross","PPARGC1A--AC097512.1","ENSG00000109819","ENSG00000248837",10.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_BRCA","TCGA-GI-A2C9-01A","14:NEMF:49846140:-:14:AL627171.2:49861896:-:rev","NEMF--AL627171.2","ENSG00000165525","ENSG00000282885",3.0,1.0,1.0,1.0,0.779,"NA"]
["TCGA_BRCA","TCGA-GM-A2DB-01A","2:GPC1:240436084:+:2:AC079612.2:239630578:+:rev","GPC1--AC079612.2","ENSG00000063660","ENSG00000227459",2.0,1.0,1.0,1.0,0.638,"NA"]
["TCGA_BRCA","TCGA-GM-A2DD-01A","6:C2:31928164:+:6:MCCD1:31529747:+:rev","C2--MCCD1","ENSG00000166278","ENSG00000204511",2.0,1.0,1.0,1.0,0.649,"NA"]
["TCGA_BRCA","TCGA-GM-A2DK-01A","11:PPFIA1:70362488:+:11:TPCN2:69159446:+:rev","PPFIA1--TPCN2","ENSG00000131626","ENSG00000162341",5.0,1.0,1.0,1.0,0.872,0.00579710144928]
["TCGA_BRCA","TCGA-GM-A2DK-01A","7:UBN2:139237097:+:7:TRIM24:138567481:+:rev","UBN2--TRIM24","ENSG00000157741","ENSG00000122779",2.0,1.0,1.0,1.0,0.822,"NA"]
["TCGA_BRCA","TCGA-GM-A3NW-01A","6:PNISR:99425215:-:6:CCNC:99551895:-:rev","PNISR--CCNC","ENSG00000132424","ENSG00000112237",1.0,1.0,2.0,1.0,0.963,"NA"]
["TCGA_BRCA","TCGA-JL-A3YW-01A","6:FKBP5:35688804:-:6:AL451165.2:34697159:+:strandcross","FKBP5--AL451165.2","ENSG00000096060","ENSG00000272288",3.0,1.0,1.0,1.0,0.879,0.0]
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["TCGA_BRCA","TCGA-LD-A7W5-01A","10:TACC2:122113233:+:10:TMEM26-AS1:61467498:+:rev","TACC2--TMEM26-AS1","ENSG00000138162","ENSG00000237233",2.0,1.0,1.0,1.0,0.712,0.00411522633745]
["TCGA_BRCA","TCGA-LD-A7W5-01A","10:ZNF503-AS2:75404057:+:8:MAL2:119221587:+:fusion","ZNF503-AS2--MAL2","ENSG00000237149","ENSG00000147676",17.0,1.0,1.0,1.0,0.300745452042028,0.0082304526749]
["TCGA_BRCA","TCGA-LD-A7W5-01A","8:MAL2:119221757:+:10:ZMIZ1-AS1:78962049:-:fusion","MAL2--ZMIZ1-AS1","ENSG00000147676","ENSG00000224596",36.0,1.0,1.0,1.0,0.952693919780083,0.00205761316872]
["TCGA_BRCA","TCGA-LD-A7W5-01A","8:MAL2:119221757:+:10:ZMIZ1-AS1:78962886:-:fusion","MAL2--ZMIZ1-AS1","ENSG00000147676","ENSG00000224596",12.0,1.0,1.0,1.0,0.998,0.0]
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["TCGA_BRCA","TCGA-LL-A5YN-01A","15:HERC1:63677845:-:15:AC087632.1:64366075:-:rev","HERC1--AC087632.1","ENSG00000103657","ENSG00000259316",7.0,1.0,1.0,1.0,0.731,"NA"]
["TCGA_BRCA","TCGA-LL-A7SZ-01A","21:RUNX1:34880557:-:6:AL357507.1:74347075:+:fusion","RUNX1--AL357507.1","ENSG00000159216","ENSG00000223786",30.0,1.0,1.0,1.0,0.966503399752053,0.00249376558603]
["TCGA_BRCA","TCGA-OL-A5D6-01A","22:LINC01315:42368715:-:22:POLDIP3:42599793:-:rev","LINC01315--POLDIP3","ENSG00000229891","ENSG00000100227",2.0,1.0,1.0,1.0,0.932,"NA"]
["TCGA_BRCA","TCGA-OL-A5D8-01A","1:ARID4B:235260642:-:1:PCNX2:233179175:-:reg","ARID4B--PCNX2","ENSG00000054267","ENSG00000135749",2.0,1.0,1.0,1.0,0.924,0.00512820512821]
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["TCGA_BRCA","TCGA-OL-A5RZ-01A","17:RPL19:39201319:+:17:KIAA0100:28617318:-:strandcross","RPL19--KIAA0100","ENSG00000108298","ENSG00000007202",3.0,1.0,1.0,1.0,0.84,0.00327868852459]
["TCGA_BRCA","TCGA-OL-A66N-01A","16:ZC3H7A:11797124:-:16:BCAR4:11820297:-:rev","ZC3H7A--BCAR4","ENSG00000122299","ENSG00000262117",7.0,16.0,13.0,13.0,0.726,"NA"]
["TCGA_BRCA","TCGA-OL-A66P-01A","19:SLC27A1:17497464:+:19:DDA1:17319546:+:rev","SLC27A1--DDA1","ENSG00000130304","ENSG00000130311",2.0,1.0,1.0,1.0,0.564,"NA"]
["TCGA_BRCA","TCGA-OL-A6VO-01A","16:GRIN2A:10121328:-:16:CPPED1:12781403:-:rev","GRIN2A--CPPED1","ENSG00000183454","ENSG00000103381",3.0,1.0,1.0,1.0,0.897,0.00127877237852]
["TCGA_BRCA","TCGA-PL-A8LV-01A","1:DHX9:182855713:+:1:CACNA1E:181715338:+:rev","DHX9--CACNA1E","ENSG00000135829","ENSG00000198216",2.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_BRCA","TCGA-S3-AA0Z-01A","8:KCNB2:72568313:+:8:DNAJC5B:66076660:+:rev","KCNB2--DNAJC5B","ENSG00000182674","ENSG00000147570",5.0,1.0,1.0,1.0,0.662,0.00597014925373]
["TCGA_BRCA","TCGA-S3-AA11-01A","11:KMT5B:68213477:-:11:CFL1:65856242:-:reg","KMT5B--CFL1","ENSG00000110066","ENSG00000172757",3.0,3.0,1.0,1.0,0.888,0.0]
["TCGA_BRCA","TCGA-UL-AAZ6-01A","17:BCAS3:61038054:+:17:GDPD1:59245414:+:rev","BCAS3--GDPD1","ENSG00000141376","ENSG00000153982",5.0,1.0,1.0,1.0,0.732,0.0026525198939]
["TCGA_BRCA","TCGA-UU-A93S-01A","5:CANX:179720560:+:16:LINC01082:86199512:+:fusion","CANX--LINC01082","ENSG00000127022","ENSG00000269186",531.0,1.0,1.0,1.0,0.999999866723628,0.0]
["TCGA_BRCA","TCGA-XX-A899-01A","12:AC134511.1:67069050:-:11:PPME1:74250954:+:fusion","AC134511.1--PPME1","ENSG00000256248","ENSG00000214517",2.0,1.0,1.0,1.0,0.926,0.00438596491228]
["TCGA_CESC","TCGA-4J-AA1J-01A","17:C17orf53:44149027:+:17:AC018521.4:47980682:-:strandcross","C17orf53--AC018521.4","ENSG00000125319","ENSG00000264701",5.0,1.0,1.0,1.0,0.39,0.0093896713615]
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["TCGA_CESC","TCGA-C5-A1M6-01A","16:ZC3H7A:11797124:-:16:BCAR4:11820297:-:rev","ZC3H7A--BCAR4","ENSG00000122299","ENSG00000262117",19.0,16.0,13.0,13.0,0.862744490814054,"NA"]
["TCGA_CESC","TCGA-C5-A1MJ-01A","16:ZC3H7A:11796219:-:16:BCAR4:11820297:-:rev","ZC3H7A--BCAR4","ENSG00000122299","ENSG00000262117",5.0,7.0,6.0,5.0,0.509,"NA"]
["TCGA_CESC","TCGA-C5-A2LX-01A","19:CPT1C:49692393:+:19:RPS11:49499512:+:rev","CPT1C--RPS11","ENSG00000169169","ENSG00000142534",1.0,1.0,1.0,1.0,0.942,"NA"]
["TCGA_CESC","TCGA-C5-A3HD-01B","7:DNAJB6:157337628:+:7:UBE3C:157253954:+:rev","DNAJB6--UBE3C","ENSG00000105993","ENSG00000009335",2.0,1.0,1.0,1.0,0.865,"NA"]
["TCGA_CESC","TCGA-C5-A7UE-01A","10:MTG1:133402773:+:10:PAOX:133388956:+:rev","MTG1--PAOX","ENSG00000254536","ENSG00000148832",2.0,1.0,1.0,1.0,0.94,"NA"]
["TCGA_CESC","TCGA-C5-A7X5-01A","1:PPIE:39745498:+:1:MACF1:39485538:+:rev","PPIE--MACF1","ENSG00000084072","ENSG00000127603",2.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_CESC","TCGA-C5-A901-01A","19:CLASRP:45059364:+:19:LIPE-AS1:42651087:+:rev","CLASRP--LIPE-AS1","ENSG00000104859","ENSG00000213904",53.0,1.0,1.0,1.0,0.961298450078791,0.00223713646532]
["TCGA_CESC","TCGA-C5-A902-01A","19:BRD4:15332290:-:11:C11orf24:68268251:-:fusion","BRD4--C11orf24","ENSG00000141867","ENSG00000171067",2.0,1.0,1.0,1.0,0.485,0.0019801980198]
["TCGA_CESC","TCGA-DS-A0VL-01A","21:DYRK1A:37493163:+:21:APP:25911962:-:strandcross","DYRK1A--APP","ENSG00000157540","ENSG00000142192",18.0,1.0,1.0,1.0,0.805671962951005,0.0]
["TCGA_CESC","TCGA-DS-A1OC-01A","1:AGRN:1022462:+:1:AL645608.7:915750:+:rev","AGRN--AL645608.7","ENSG00000188157","ENSG00000272438",2.0,1.0,1.0,1.0,0.587,"NA"]
["TCGA_CESC","TCGA-DS-A3LQ-01A","2:FAM117B:202635788:+:2:BMPR2:202513719:+:rev","FAM117B--BMPR2","ENSG00000138439","ENSG00000204217",3.0,1.0,2.0,1.0,0.783,"NA"]
["TCGA_CESC","TCGA-DS-A7WI-01A","7:EGFR:55174820:+:7:SEC61G:54752420:-:strandcross","EGFR--SEC61G","ENSG00000146648","ENSG00000132432",23.0,1.0,1.0,1.0,0.619510983930145,0.00414937759336]
["TCGA_CESC","TCGA-EA-A44S-01A","8:LINC01605:37493438:-:2:SEPT10:109567976:-:fusion","LINC01605--SEPT10","ENSG00000253161","ENSG00000186522",2.0,1.0,1.0,1.0,0.793,0.0]
["TCGA_CESC","TCGA-EA-A556-01A","18:ZBTB7C:48338174:-:18:DYM:49163787:-:rev","ZBTB7C--DYM","ENSG00000184828","ENSG00000141627",1.0,1.0,1.0,1.0,0.933,"NA"]
["TCGA_CESC","TCGA-EA-A5O9-01A","6:DTNBP1:15615267:-:3:AC092958.1:148006588:+:fusion","DTNBP1--AC092958.1","ENSG00000047579","ENSG00000239922",3.0,1.0,1.0,1.0,0.84,0.00139664804469]
["TCGA_CESC","TCGA-EA-A5ZF-01A","16:LITAF:11586886:-:16:BCAR4:11820297:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",18.0,12.0,10.0,9.0,0.869319967269342,"NA"]
["TCGA_CESC","TCGA-EK-A2PM-01A","7:TRA2A:23531789:-:7:AC004691.2:30911993:+:strandcross","TRA2A--AC004691.2","ENSG00000164548","ENSG00000250424",11.0,1.0,1.0,1.0,0.916,0.0]
["TCGA_CESC","TCGA-EK-A2RJ-01A","19:RELB:45002994:+:5:AC109471.3:125325350:+:fusion","RELB--AC109471.3","ENSG00000104856","ENSG00000281608",1.0,1.0,1.0,1.0,0.732,0.00194174757282]
["TCGA_CESC","TCGA-EX-A1H5-01A","20:CTNNBL1:37694152:+:20:MANBAL:37316308:+:rev","CTNNBL1--MANBAL","ENSG00000132792","ENSG00000101363",2.0,1.0,1.0,1.0,0.476,"NA"]
["TCGA_CESC","TCGA-FU-A3EO-01A","16:LITAF:11586886:-:16:BCAR4:11820297:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",40.0,12.0,10.0,9.0,0.943858585153256,"NA"]
["TCGA_CESC","TCGA-FU-A3HY-01A","22:MYH9:36300851:-:12:PTMS:6769603:+:fusion","MYH9--PTMS","ENSG00000100345","ENSG00000159335",2.0,1.0,1.0,1.0,0.92,0.0048309178744]
["TCGA_CESC","TCGA-FU-A40J-01A","19:C19orf38:10836770:+:19:DNM2:10819980:+:rev","C19orf38--DNM2","ENSG00000214212","ENSG00000079805",1.0,1.0,2.0,1.0,0.836,"NA"]
["TCGA_CESC","TCGA-HM-A6W2-01A","7:AC007161.3:7641705:+:7:MIOS:7605942:+:rev","AC007161.3--MIOS","ENSG00000219545","ENSG00000164654",4.0,1.0,1.0,1.0,0.903,"NA"]
["TCGA_CESC","TCGA-IR-A3LA-01A","2:LRRFIP1:237627740:+:2:MLPH:237546606:+:rev","LRRFIP1--MLPH","ENSG00000124831","ENSG00000115648",2.0,1.0,1.0,1.0,0.59,"NA"]
["TCGA_CESC","TCGA-IR-A3LH-01A","19:ZNF83:52655561:-:19:LIPE-AS1:42485135:+:strandcross","ZNF83--LIPE-AS1","ENSG00000167766","ENSG00000213904",3.0,1.0,1.0,1.0,0.934,0.0]
["TCGA_CESC","TCGA-JW-A5VJ-01A","2:PAX8-AS1:113263454:+:2:IL36G:112978620:+:rev","PAX8-AS1--IL36G","ENSG00000189223","ENSG00000136688",7.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_CESC","TCGA-LP-A5U3-01A","1:AL590666.2:156661315:-:1:HDGF:156745373:-:rev","AL590666.2--HDGF","ENSG00000229953","ENSG00000143321",1.0,1.0,1.0,1.0,0.845,"NA"]
["TCGA_CESC","TCGA-MU-A51Y-01A","14:RBM23:22904875:-:14:PSMB5:23033674:-:rev","RBM23--PSMB5","ENSG00000100461","ENSG00000100804",3.0,2.0,4.0,2.0,0.989,"NA"]
["TCGA_CESC","TCGA-Q1-A6DT-01A","20:TPX2:31742647:+:20:AL121917.1:58885015:-:strandcross","TPX2--AL121917.1","ENSG00000088325","ENSG00000225806",4.0,1.0,1.0,1.0,0.669,0.00406504065041]
["TCGA_CESC","TCGA-Q1-A73R-01A","17:ERBB2:39700311:+:17:STARD3:39653481:+:rev","ERBB2--STARD3","ENSG00000141736","ENSG00000131748",2.0,2.0,1.0,1.0,0.967,"NA"]
["TCGA_CESC","TCGA-Q1-A73R-01A","17:ERBB2:39719834:+:17:STARD3:39653481:+:rev","ERBB2--STARD3","ENSG00000141736","ENSG00000131748",5.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_CESC","TCGA-UC-A7PD-01A","2:LINC01121:45300984:-:2:SCN2A:165295773:+:strandcross","LINC01121--SCN2A","ENSG00000205054","ENSG00000136531",2.0,1.0,1.0,1.0,0.933,0.0018281535649]
["TCGA_CESC","TCGA-VS-A8EC-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",7.0,23.0,20.0,15.0,0.693,"NA"]
["TCGA_CESC","TCGA-VS-A8EG-01A","17:GLOD4:782166:-:17:YWHAE:1362008:-:rev","GLOD4--YWHAE","ENSG00000167699","ENSG00000108953",1.0,1.0,1.0,1.0,0.835,"NA"]
["TCGA_CESC","TCGA-VS-A8Q9-01A","19:GIPC1:14492857:-:19:NDUFB7:14566933:-:rev","GIPC1--NDUFB7","ENSG00000123159","ENSG00000099795",2.0,1.0,1.0,1.0,0.616,"NA"]
["TCGA_CESC","TCGA-VS-A94W-01A","9:RFX3:3346667:-:9:NFIB:14307520:-:rev","RFX3--NFIB","ENSG00000080298","ENSG00000147862",2.0,1.0,1.0,1.0,0.941,0.00226244343891]
["TCGA_CESC","TCGA-VS-A9U5-01A","1:ATF3:212615261:+:1:LINC01740:212554412:+:rev","ATF3--LINC01740","ENSG00000162772","ENSG00000228067",37.0,1.0,1.0,1.0,0.716190778368517,"NA"]
["TCGA_CESC","TCGA-VS-A9U7-01A","1:OBSCN:228224734:+:1:SNAP47:227758995:+:rev","OBSCN--SNAP47","ENSG00000154358","ENSG00000143740",1.0,1.0,1.0,1.0,0.859,"NA"]
["TCGA_CESC","TCGA-VS-A9V4-01A","19:SIPA1L3:37932692:+:19:AF038458.2:35963547:+:rev","SIPA1L3--AF038458.2","ENSG00000105738","ENSG00000267388",3.0,1.0,1.0,1.0,0.794,0.010752688172]
["TCGA_CESC","TCGA-ZJ-AAX8-01A","10:WBP1L:102744143:+:10:SUFU:102592582:+:rev","WBP1L--SUFU","ENSG00000166272","ENSG00000107882",6.0,3.0,4.0,3.0,0.927,"NA"]
["TCGA_CHOL","TCGA-4G-AAZO-01A","6:AFDN:167827237:+:6:AL033519.3:35544868:+:rev","AFDN--AL033519.3","ENSG00000130396","ENSG00000228559",13.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_CHOL","TCGA-W5-AA2X-01A","12:CPSF6:69262562:+:X:NR0B1:30304823:-:fusion","CPSF6--NR0B1","ENSG00000111605","ENSG00000169297",4.0,3.0,4.0,1.0,1.0,0.0]
["TCGA_CHOL","TCGA-ZD-A8I3-01A","3:VGLL4:11671262:-:3:ATG7:11554811:+:strandcross","VGLL4--ATG7","ENSG00000144560","ENSG00000197548",7.0,2.0,1.0,1.0,0.798,0.0110497237569]
["TCGA_CHOL","TCGA-ZU-A8S4-01A","11:NAV2:19868997:+:11:AC131571.1:31645756:-:strandcross","NAV2--AC131571.1","ENSG00000166833","ENSG00000228061",4.0,1.0,1.0,1.0,0.952,0.00358422939068]
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["TCGA_COAD","TCGA-A6-2684-01A","2:MAP3K20-AS1:173271511:-:2:OLA1:174082064:-:rev","MAP3K20-AS1--OLA1","ENSG00000238133","ENSG00000138430",2.0,1.0,1.0,1.0,0.903,"NA"]
["TCGA_COAD","TCGA-A6-3809-01A","9:ZCCHC7:37126942:+:20:CPNE1:35659014:-:fusion","ZCCHC7--CPNE1","ENSG00000147905","ENSG00000214078",6.0,1.0,1.0,1.0,0.999,0.0]
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["TCGA_COAD","TCGA-A6-5659-01A","1:AC118553.2:100043229:+:1:SLC35A3:100007034:+:rev","AC118553.2--SLC35A3","ENSG00000283761","ENSG00000117620",3.0,1.0,3.0,1.0,1.0,"NA"]
["TCGA_COAD","TCGA-A6-6650-01A","17:GPATCH8:44503326:-:17:EFTUD2:44886750:-:rev","GPATCH8--EFTUD2","ENSG00000186566","ENSG00000108883",2.0,1.0,1.0,1.0,0.831,"NA"]
["TCGA_COAD","TCGA-A6-6781-01A","12:DNAH10:123774264:+:12:ATP6V0A2:123737059:+:rev","DNAH10--ATP6V0A2","ENSG00000197653","ENSG00000185344",3.0,1.0,1.0,1.0,0.955,"NA"]
["TCGA_COAD","TCGA-AD-6899-01A","9:ASS1:130480449:+:1:LINC01527:152931811:-:fusion","ASS1--LINC01527","ENSG00000130707","ENSG00000224308",4.0,1.0,1.0,1.0,0.327,0.0161725067385]
["TCGA_COAD","TCGA-AZ-6598-01A","7:MAD1L1:2229984:-:7:EIF3B:2366317:+:strandcross","MAD1L1--EIF3B","ENSG00000002822","ENSG00000106263",2.0,1.0,1.0,1.0,0.985,0.0]
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["TCGA_COAD","TCGA-CM-5863-01A","8:CA13:85250937:+:8:LRRCC1:85141382:+:rev","CA13--LRRCC1","ENSG00000185015","ENSG00000133739",1.0,1.0,1.0,1.0,0.915,"NA"]
["TCGA_COAD","TCGA-D5-6530-01A","11:XRRA1:74906239:-:11:AP001972.4:75099880:-:rev","XRRA1--AP001972.4","ENSG00000166435","ENSG00000255395",2.0,1.0,1.0,1.0,0.773,"NA"]
["TCGA_COAD","TCGA-D5-6541-01A","X:FAM122B:134797121:-:19:KLK1:50820443:-:fusion","FAM122B--KLK1","ENSG00000156504","ENSG00000167748",2.0,1.0,1.0,1.0,0.792,0.00980392156863]
["TCGA_COAD","TCGA-DM-A0XF-01A","20:ARFRP1:63706357:-:8:ARHGAP39:144548489:-:fusion","ARFRP1--ARHGAP39","ENSG00000101246","ENSG00000147799",2.0,1.0,1.0,1.0,0.904,0.0]
["TCGA_COAD","TCGA-DM-A285-01A","8:ADAM9:39026810:+:8:AC103957.2:8458526:-:strandcross","ADAM9--AC103957.2","ENSG00000168615","ENSG00000254153",2.0,1.0,1.0,1.0,0.864,0.0]
["TCGA_COAD","TCGA-DM-A285-01A","8:ADAM9:39042117:+:8:AC103957.2:8458526:-:strandcross","ADAM9--AC103957.2","ENSG00000168615","ENSG00000254153",20.0,1.0,1.0,1.0,0.223063904015356,0.0174081237911]
["TCGA_COAD","TCGA-F4-6570-01A","19:ZNF440:11814450:+:19:PRKCSH:11445389:+:rev","ZNF440--PRKCSH","ENSG00000171295","ENSG00000130175",1.0,1.0,1.0,1.0,0.883,"NA"]
["TCGA_COAD","TCGA-F4-6809-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",4.0,23.0,20.0,15.0,0.957,"NA"]
["TCGA_COAD","TCGA-T9-A92H-01A","19:TIMM50:39480961:+:19:SUPT5H:39457675:+:rev","TIMM50--SUPT5H","ENSG00000105197","ENSG00000196235",2.0,1.0,1.0,1.0,0.963,"NA"]
["TCGA_DLBC","TCGA-FF-8061-01A","2:RNF103-CHMP3:86688232:-:2:CYTOR:87521207:+:strandcross","RNF103-CHMP3--CYTOR","ENSG00000249884","ENSG00000222041",2.0,1.0,1.0,1.0,0.565,0.00299401197605]
["TCGA_DLBC","TCGA-G8-6906-01A","4:RHOH:40197300:+:3:BCL6:187734907:-:fusion","RHOH--BCL6","ENSG00000168421","ENSG00000113916",6.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_ESCA","TCGA-2H-A9GF-01A","13:AL139383.1:33359465:-:13:CAB39L:49382941:-:rev","AL139383.1--CAB39L","ENSG00000230490","ENSG00000102547",2.0,1.0,1.0,1.0,0.42,0.00214132762313]
["TCGA_ESCA","TCGA-2H-A9GF-01A","6:FAM50B:3849486:+:6:NQO2:3006468:+:rev","FAM50B--NQO2","ENSG00000145945","ENSG00000124588",2.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","8:NCOA2:70155971:-:8:STAU2-AS1:73438932:+:strandcross","NCOA2--STAU2-AS1","ENSG00000140396","ENSG00000253302",5.0,1.0,1.0,1.0,0.541,0.0]
["TCGA_ESCA","TCGA-2H-A9GG-01A","8:ZC2HC1A:78689373:+:8:AC105031.3:82912939:+:reg","ZC2HC1A--AC105031.3","ENSG00000104427","ENSG00000254394",3.0,1.0,1.0,1.0,0.761,0.0]
["TCGA_ESCA","TCGA-2H-A9GG-01A","11:HSD17B12:43680987:+:11:AC068205.1:43672991:+:rev","HSD17B12--AC068205.1","ENSG00000149084","ENSG00000283217",5.0,1.0,1.0,1.0,0.65,"NA"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","17:KAT7:49792033:+:17:AC004231.1:40975497:+:rev","KAT7--AC004231.1","ENSG00000136504","ENSG00000234477",14.0,1.0,1.0,1.0,0.651,0.0]
["TCGA_ESCA","TCGA-2H-A9GI-01A","17:TNS4:40480700:-:17:WIPF2:40256391:+:strandcross","TNS4--WIPF2","ENSG00000131746","ENSG00000171475",54.0,1.0,1.0,1.0,0.671473304166958,0.0]
["TCGA_ESCA","TCGA-2H-A9GI-01A","17:TOP2A:40389516:-:17:CDK12:39511529:+:strandcross","TOP2A--CDK12","ENSG00000131747","ENSG00000167258",6.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","17:ABR:1050050:-:17:LINC01989:34190668:-:rev","ABR--LINC01989","ENSG00000159842","ENSG00000261156",24.0,1.0,1.0,1.0,0.701847239717762,0.0]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","10:VCL:74097332:+:10:AC022400.1:73814429:+:rev","VCL--AC022400.1","ENSG00000035403","ENSG00000224195",2.0,1.0,1.0,1.0,0.663,"NA"]
["TCGA_ESCA","TCGA-2H-A9GL-01A","2:AGAP1:235494849:+:21:WRB:39390698:+:fusion","AGAP1--WRB","ENSG00000157985","ENSG00000182093",7.0,1.0,1.0,1.0,0.786,0.00162206001622]
["TCGA_ESCA","TCGA-2H-A9GM-01A","7:ZNRF2:30362456:+:13:PIBF1:72908531:+:fusion","ZNRF2--PIBF1","ENSG00000180233","ENSG00000083535",3.0,1.0,1.0,1.0,0.859,0.0]
["TCGA_ESCA","TCGA-2H-A9GN-01A","1:EPS8L3:109757802:-:1:CSF1:109914259:+:strandcross","EPS8L3--CSF1","ENSG00000198758","ENSG00000184371",5.0,1.0,1.0,1.0,0.161,0.00651996740016]
["TCGA_ESCA","TCGA-2H-A9GN-01A","12:PRIM1:56734147:-:12:R3HDM2:57269994:-:rev","PRIM1--R3HDM2","ENSG00000198056","ENSG00000258830",2.0,1.0,1.0,1.0,0.986,"NA"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","1:PANK4:2509862:-:1:TTC34:2645563:-:rev","PANK4--TTC34","ENSG00000157881","ENSG00000215912",10.0,1.0,1.0,1.0,0.942,"NA"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","7:GBX1:151167011:-:7:RHEB:151491014:-:rev","GBX1--RHEB","ENSG00000164900","ENSG00000106615",1.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_ESCA","TCGA-2H-A9GO-01A","18:ROCK1:21110818:-:18:AC090912.1:22704920:-:rev","ROCK1--AC090912.1","ENSG00000067900","ENSG00000265943",6.0,1.0,1.0,1.0,0.93,0.0]
["TCGA_ESCA","TCGA-2H-A9GQ-01A","10:LRMDA:75438494:+:10:CYP2C19:94849917:+:reg","LRMDA--CYP2C19","ENSG00000148655","ENSG00000276490",6.0,2.0,2.0,2.0,0.405,0.0119521912351]
["TCGA_ESCA","TCGA-2H-A9GR-01A","14:FUT8:65455718:+:17:CDK12:39470879:+:fusion","FUT8--CDK12","ENSG00000033170","ENSG00000167258",3.0,1.0,1.0,1.0,0.49,0.0]
["TCGA_ESCA","TCGA-IC-A6RE-01A","19:SIPA1L3:38182740:+:19:ODF3L2:464364:-:strandcross","SIPA1L3--ODF3L2","ENSG00000105738","ENSG00000181781",10.0,1.0,1.0,1.0,0.152,0.0299401197605]
["TCGA_ESCA","TCGA-IC-A6RE-01A","9:ERMP1:5797817:-:9:UHRF2:6420912:+:strandcross","ERMP1--UHRF2","ENSG00000099219","ENSG00000147854",3.0,1.0,1.0,1.0,0.353,0.0103092783505]
["TCGA_ESCA","TCGA-IG-A3I8-01A","11:YAP1:102114394:+:11:CDON:126023537:-:strandcross","YAP1--CDON","ENSG00000137693","ENSG00000064309",8.0,1.0,1.0,1.0,0.323,9.85221674877E-4]
["TCGA_ESCA","TCGA-IG-A3Y9-01A","10:AL138767.2:87591607:-:10:CCSER2:84513449:+:strandcross","AL138767.2--CCSER2","ENSG00000223761","ENSG00000107771",1.0,1.0,1.0,1.0,0.826,5.65610859729E-4]
["TCGA_ESCA","TCGA-IG-A3YC-01A","19:MAP2K7:7904068:+:19:CACNA1A:13262833:-:strandcross","MAP2K7--CACNA1A","ENSG00000076984","ENSG00000141837",9.0,1.0,1.0,1.0,0.786,0.0]
["TCGA_ESCA","TCGA-IG-A4P3-01A","13:PCCA:100368574:+:13:SPATA13:24249477:+:rev","PCCA--SPATA13","ENSG00000175198","ENSG00000182957",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_ESCA","TCGA-IG-A4QS-01A","1:FUBP1:77956572:-:11:CD44:35204512:+:fusion","FUBP1--CD44","ENSG00000162613","ENSG00000026508",1.0,1.0,1.0,1.0,0.792,0.00162074554295]
["TCGA_ESCA","TCGA-IG-A51D-01A","18:DSC3:31042592:-:12:UBC:124913774:-:fusion","DSC3--UBC","ENSG00000134762","ENSG00000150991",2.0,1.0,1.0,1.0,0.285,0.00253807106599]
["TCGA_ESCA","TCGA-IG-A6QS-01A","2:SOS1:39120336:-:9:FAM120A:93543222:+:fusion","SOS1--FAM120A","ENSG00000115904","ENSG00000048828",2.0,1.0,1.0,1.0,0.852,0.0]
["TCGA_ESCA","TCGA-IG-A7DP-01A","17:AC060780.1:43170126:-:3:ARPC4:9797659:+:fusion","AC060780.1--ARPC4","ENSG00000012048","ENSG00000241553",4.0,1.0,1.0,1.0,0.891,0.0]
["TCGA_ESCA","TCGA-IG-A8O2-01A","2:FBXO11:47838859:-:10:NET1:5451830:+:fusion","FBXO11--NET1","ENSG00000138081","ENSG00000173848",5.0,1.0,1.0,1.0,0.28,0.00788436268068]
["TCGA_ESCA","TCGA-IG-A97H-01A","16:CARHSP1:8868049:-:16:USP7:8923413:-:rev","CARHSP1--USP7","ENSG00000153048","ENSG00000187555",2.0,1.0,1.0,1.0,0.992,"NA"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","1:MAGI3:113549631:+:1:RGS18:192158631:+:reg","MAGI3--RGS18","ENSG00000081026","ENSG00000150681",4.0,1.0,1.0,1.0,0.967,0.0031746031746]
["TCGA_ESCA","TCGA-JY-A6FA-01A","2:PPIG:169584490:+:2:NFE2L2:177234271:-:strandcross","PPIG--NFE2L2","ENSG00000138398","ENSG00000116044",2.0,1.0,1.0,1.0,0.417,0.00334821428571]
["TCGA_ESCA","TCGA-JY-A6FB-01A","17:TANC2:63009626:+:17:AC027801.4:49932738:+:rev","TANC2--AC027801.4","ENSG00000170921","ENSG00000254039",2.0,1.0,1.0,1.0,0.389,0.0]
["TCGA_ESCA","TCGA-JY-A6FB-01A","19:GYS1:48991302:-:19:FTL:48966281:+:strandcross","GYS1--FTL","ENSG00000104812","ENSG00000087086",3.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_ESCA","TCGA-JY-A6FE-01A","1:RCC1:28508160:+:17:COPZ2:48033944:-:fusion","RCC1--COPZ2","ENSG00000180198","ENSG00000005243",3.0,1.0,1.0,1.0,0.288,0.0217983651226]
["TCGA_ESCA","TCGA-JY-A6FG-01A","3:MBNL1:152269092:+:22:ATXN10:45729425:+:fusion","MBNL1--ATXN10","ENSG00000152601","ENSG00000130638",2.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_ESCA","TCGA-JY-A6FH-01A","1:MAN1C1:25618337:+:17:AC005702.2:59972835:+:fusion","MAN1C1--AC005702.2","ENSG00000117643","ENSG00000267318",9.0,1.0,1.0,1.0,0.448,0.0]
["TCGA_ESCA","TCGA-JY-A6FH-01A","12:ITGA7:55697695:-:12:RNF41:56216613:-:rev","ITGA7--RNF41","ENSG00000135424","ENSG00000181852",2.0,1.0,1.0,1.0,0.788,"NA"]
["TCGA_ESCA","TCGA-JY-A938-01A","17:TOP2A:40391506:-:17:AC025211.1:32686253:+:strandcross","TOP2A--AC025211.1","ENSG00000131747","ENSG00000264458",25.0,1.0,1.0,1.0,0.378386413347329,0.00174064403829]
["TCGA_ESCA","TCGA-JY-A939-01A","19:ATP4A:35558993:-:12:FKBP4:2799088:+:fusion","ATP4A--FKBP4","ENSG00000105675","ENSG00000004478",3.0,1.0,1.0,1.0,0.767,0.0606060606061]
["TCGA_ESCA","TCGA-JY-A93E-01A","11:EHF:34656970:+:4:AC124017.1:53716832:+:fusion","EHF--AC124017.1","ENSG00000135373","ENSG00000249341",6.0,1.0,1.0,1.0,0.502,0.0]
["TCGA_ESCA","TCGA-L5-A43C-01A","4:HTT:3160392:+:4:FAM193A:2716023:+:rev","HTT--FAM193A","ENSG00000197386","ENSG00000125386",1.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_ESCA","TCGA-L5-A43I-01A","8:MSRA:10319989:+:8:BAALC-AS1:103285902:-:strandcross","MSRA--BAALC-AS1","ENSG00000175806","ENSG00000247081",6.0,1.0,1.0,1.0,0.177,0.00702576112412]
["TCGA_ESCA","TCGA-L5-A43I-01A","2:TTC7A:46950526:+:2:SOCS5:46758519:+:rev","TTC7A--SOCS5","ENSG00000068724","ENSG00000171150",3.0,2.0,2.0,2.0,0.884,"NA"]
["TCGA_ESCA","TCGA-L5-A43M-01A","12:AC134511.1:67069050:-:12:WIF1:65056126:-:reg","AC134511.1--WIF1","ENSG00000256248","ENSG00000156076",14.0,1.0,1.0,1.0,0.947,0.0]
["TCGA_ESCA","TCGA-L5-A43M-01A","1:CLIC4:24745625:+:19:MUM1:1357009:+:fusion","CLIC4--MUM1","ENSG00000169504","ENSG00000160953",10.0,1.0,1.0,1.0,0.333,0.0017793594306]
["TCGA_ESCA","TCGA-L5-A43M-01A","10:AIFM2:70123405:-:10:LRRC20:70301508:-:rev","AIFM2--LRRC20","ENSG00000042286","ENSG00000172731",6.0,1.0,1.0,1.0,0.409,"NA"]
["TCGA_ESCA","TCGA-L5-A43M-01A","9:GCNT1:76459305:+:9:PCSK5:76227503:+:rev","GCNT1--PCSK5","ENSG00000187210","ENSG00000099139",6.0,1.0,1.0,1.0,0.725,"NA"]
["TCGA_ESCA","TCGA-L5-A4OF-01A","22:PPP6R2:50343550:+:22:SBF1:50448650:-:strandcross","PPP6R2--SBF1","ENSG00000100239","ENSG00000100241",36.0,1.0,1.0,1.0,0.454639776900641,0.00199203187251]
["TCGA_ESCA","TCGA-L5-A4OJ-01A","21:USP25:15730438:+:21:AL157359.2:18918217:-:strandcross","USP25--AL157359.2","ENSG00000155313","ENSG00000232193",14.0,1.0,1.0,1.0,0.971,0.0]
["TCGA_ESCA","TCGA-L5-A4OO-01A","12:ATP2B1:89708596:-:12:PPFIA2-AS1:81312047:+:strandcross","ATP2B1--PPFIA2-AS1","ENSG00000070961","ENSG00000257467",11.0,1.0,1.0,1.0,0.292,0.00455580865604]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","19:CEP89:32931429:-:8:GTF2E2:30580396:-:fusion","CEP89--GTF2E2","ENSG00000121289","ENSG00000197265",3.0,1.0,1.0,1.0,0.392,7.76397515528E-4]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","22:PI4KA:20810967:-:22:AC002472.1:21042703:+:strandcross","PI4KA--AC002472.1","ENSG00000241973","ENSG00000226872",5.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","10:NMT2:15168503:-:10:FAM171A1:15284105:-:rev","NMT2--FAM171A1","ENSG00000152465","ENSG00000148468",6.0,1.0,1.0,1.0,0.841,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","16:ZC3H7A:11797124:-:16:BCAR4:11820297:-:rev","ZC3H7A--BCAR4","ENSG00000122299","ENSG00000262117",19.0,16.0,13.0,13.0,0.721922097917448,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","18:AC091551.1:50974561:+:18:MAPK4:50663089:+:rev","AC091551.1--MAPK4","ENSG00000141642","ENSG00000141639",1.0,1.0,1.0,1.0,0.918,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","1:PRPF3:150340477:+:1:VPS45:150144709:+:rev","PRPF3--VPS45","ENSG00000117360","ENSG00000136631",2.0,1.0,1.0,1.0,0.96,"NA"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","2:ASB1:238427119:+:2:UBE2F:238016566:+:rev","ASB1--UBE2F","ENSG00000065802","ENSG00000184182",1.0,1.0,1.0,1.0,0.906,"NA"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","10:EPC1:32291163:-:18:L3MBTL4:6301957:-:fusion","EPC1--L3MBTL4","ENSG00000120616","ENSG00000154655",16.0,1.0,1.0,1.0,0.39619672316455,0.020202020202]
["TCGA_ESCA","TCGA-L5-A4OR-01A","10:USP54:73520908:-:1:PIK3CD:9715541:+:fusion","USP54--PIK3CD","ENSG00000166348","ENSG00000171608",3.0,1.0,1.0,1.0,0.709,0.0]
["TCGA_ESCA","TCGA-L5-A4OR-01A","18:LDLRAD4:13438384:+:18:LINC01387:6575990:+:rev","LDLRAD4--LINC01387","ENSG00000168675","ENSG00000265944",66.0,1.0,1.0,1.0,0.903352328588983,0.0]
["TCGA_ESCA","TCGA-L5-A4OS-01A","20:MROH8:37108599:-:5:AFAP1L1:149340007:+:fusion","MROH8--AFAP1L1","ENSG00000101353","ENSG00000157510",3.0,1.0,1.0,1.0,0.957,0.00243309002433]
["TCGA_ESCA","TCGA-L5-A4OS-01A","19:RPS19:41861212:+:19:CEACAM21:41586464:+:rev","RPS19--CEACAM21","ENSG00000105372","ENSG00000007129",4.0,1.0,1.0,1.0,0.555,"NA"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","6:FKBP5:35637014:-:6:CLPS:35795277:-:rev","FKBP5--CLPS","ENSG00000096060","ENSG00000137392",3.0,1.0,1.0,1.0,0.892,"NA"]
["TCGA_ESCA","TCGA-L5-A4OU-01A","7:CLIP2:74380863:+:7:ANKIB1:92294889:+:reg","CLIP2--ANKIB1","ENSG00000106665","ENSG00000001629",2.0,1.0,1.0,1.0,0.922,0.0]
["TCGA_ESCA","TCGA-L5-A4OW-01A","17:GRB7:39744207:+:17:BPTF:67944150:+:reg","GRB7--BPTF","ENSG00000141738","ENSG00000171634",3.0,1.0,1.0,1.0,0.309,0.00173460537728]
["TCGA_ESCA","TCGA-L5-A4OX-01A","5:SMAD5:136132962:+:18:MIB1:21765772:+:fusion","SMAD5--MIB1","ENSG00000113658","ENSG00000101752",2.0,1.0,1.0,1.0,0.823,0.00109170305677]
["TCGA_ESCA","TCGA-L5-A88T-01A","6:UHRF1BP1:34792294:+:6:RHAG:49612534:-:strandcross","UHRF1BP1--RHAG","ENSG00000065060","ENSG00000112077",5.0,1.0,1.0,1.0,0.736,0.00118764845606]
["TCGA_ESCA","TCGA-L5-A88V-01A","17:STARD3:39637231:+:17:PLXDC1:39139832:-:strandcross","STARD3--PLXDC1","ENSG00000131748","ENSG00000161381",2.0,1.0,1.0,1.0,0.293,0.0014880952381]
["TCGA_ESCA","TCGA-L5-A88V-01A","17:LINC00483:50767463:-:17:SPAG9:51056482:-:rev","LINC00483--SPAG9","ENSG00000167117","ENSG00000008294",1.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_ESCA","TCGA-L5-A88W-01A","15:EMC4:34227846:+:14:MTHFD1:64458214:+:fusion","EMC4--MTHFD1","ENSG00000128463","ENSG00000100714",2.0,1.0,1.0,1.0,0.969,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","11:KCNQ1:2445484:+:11:STIM1:3967552:+:reg","KCNQ1--STIM1","ENSG00000053918","ENSG00000167323",3.0,1.0,1.0,1.0,0.795,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","13:DCUN1D2:113490667:-:2:RNF149:101282057:-:fusion","DCUN1D2--RNF149","ENSG00000150401","ENSG00000163162",3.0,1.0,1.0,1.0,0.766,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","19:BORCS8:19182573:-:19:BCL3:44758724:+:strandcross","BORCS8--BCL3","ENSG00000064489","ENSG00000069399",2.0,1.0,1.0,1.0,0.386,0.00118343195266]
["TCGA_ESCA","TCGA-L5-A891-01A","19:ZNF562:9658009:-:2:HK2:74872300:+:fusion","ZNF562--HK2","ENSG00000171466","ENSG00000159399",8.0,1.0,1.0,1.0,0.205,0.00591715976331]
["TCGA_ESCA","TCGA-L5-A891-01A","3:DHX30:47829134:+:3:SMARCC1:47772936:-:strandcross","DHX30--SMARCC1","ENSG00000132153","ENSG00000173473",4.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_ESCA","TCGA-L5-A891-01A","11:SYTL2:85810954:-:11:PICALM:86031611:-:rev","SYTL2--PICALM","ENSG00000137501","ENSG00000073921",3.0,3.0,3.0,2.0,0.687,"NA"]
["TCGA_ESCA","TCGA-L5-A891-01A","7:ANLN:36399393:+:7:SEPT7:35863552:+:rev","ANLN--SEPT7","ENSG00000011426","ENSG00000122545",8.0,1.0,1.0,1.0,0.524,"NA"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","12:NAV3:77325214:+:12:PTPRR:70764778:-:strandcross","NAV3--PTPRR","ENSG00000067798","ENSG00000153233",2.0,1.0,1.0,1.0,0.622,0.0]
["TCGA_ESCA","TCGA-L5-A8NE-01A","9:CCDC187:136289959:-:10:PSD:102412575:-:fusion","CCDC187--PSD","ENSG00000260220","ENSG00000059915",5.0,1.0,1.0,1.0,0.4,0.00344036697248]
["TCGA_ESCA","TCGA-L5-A8NE-01A","2:MAPRE3:26970802:+:2:RAB10:26098662:+:rev","MAPRE3--RAB10","ENSG00000084764","ENSG00000084733",1.0,1.0,1.0,1.0,0.852,"NA"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","9:NUP188:128999805:+:9:ENDOG:128820739:+:rev","NUP188--ENDOG","ENSG00000095319","ENSG00000167136",8.0,1.0,1.0,1.0,0.732,"NA"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","3:SMARCC1:47670658:-:12:NUP107:68715627:+:fusion","SMARCC1--NUP107","ENSG00000173473","ENSG00000111581",2.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_ESCA","TCGA-L5-A8NG-01A","17:UTP18:51268904:+:17:KRT10:40818482:-:strandcross","UTP18--KRT10","ENSG00000011260","ENSG00000186395",2.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_ESCA","TCGA-L5-A8NH-01A","17:RETREG3:42586765:-:17:AP2B1:35674176:+:strandcross","RETREG3--AP2B1","ENSG00000141699","ENSG00000006125",83.0,1.0,1.0,1.0,0.928767086946892,0.0]
["TCGA_ESCA","TCGA-L5-A8NH-01A","17:RETREG3:42592056:-:17:AP2B1:35674176:+:strandcross","RETREG3--AP2B1","ENSG00000141699","ENSG00000006125",5.0,1.0,1.0,1.0,0.897,0.0]
["TCGA_ESCA","TCGA-L5-A8NI-01A","11:KMT5B:68213477:-:16:ECI1:2251429:-:fusion","KMT5B--ECI1","ENSG00000110066","ENSG00000167969",3.0,1.0,1.0,1.0,0.384,0.00206825232678]
["TCGA_ESCA","TCGA-L5-A8NI-01A","17:SSH2:29655561:-:17:IKZF3:39832151:-:rev","SSH2--IKZF3","ENSG00000141298","ENSG00000161405",3.0,1.0,1.0,1.0,0.901,0.0]
["TCGA_ESCA","TCGA-L5-A8NI-01A","8:OXR1:106359636:+:8:ASAP1:130092143:-:strandcross","OXR1--ASAP1","ENSG00000164830","ENSG00000153317",6.0,1.0,1.0,1.0,0.934,0.0]
["TCGA_ESCA","TCGA-L5-A8NI-01A","17:UNK:75784984:+:17:TMEM94:75485428:+:rev","UNK--TMEM94","ENSG00000132478","ENSG00000177728",2.0,1.0,1.0,1.0,0.772,"NA"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","4:RFC1:39345401:-:4:RPL9:39456538:-:rev","RFC1--RPL9","ENSG00000035928","ENSG00000163682",2.0,1.0,1.0,1.0,0.649,"NA"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","9:IKBKAP:108911010:-:9:PTPN3:109391561:-:rev","IKBKAP--PTPN3","ENSG00000070061","ENSG00000070159",1.0,1.0,1.0,1.0,0.902,"NA"]
["TCGA_ESCA","TCGA-L5-A8NJ-01A","1:EIF4G3:21089138:-:1:USP48:21724095:-:rev","EIF4G3--USP48","ENSG00000075151","ENSG00000090686",1.0,1.0,1.0,1.0,0.831,"NA"]
["TCGA_ESCA","TCGA-L5-A8NR-01A","17:ERBB2:39715939:+:X:FLNA:154365259:-:fusion","ERBB2--FLNA","ENSG00000141736","ENSG00000196924",2.0,1.0,1.0,1.0,0.68,8.42459983151E-4]
["TCGA_ESCA","TCGA-L5-A8NS-01A","16:WWP2:69888249:+:16:CDH13:82858362:+:reg","WWP2--CDH13","ENSG00000198373","ENSG00000140945",4.0,1.0,1.0,1.0,0.415,0.0]
["TCGA_ESCA","TCGA-L5-A8NU-01A","16:ABAT:8735809:+:16:PKMYT1:2974656:-:strandcross","ABAT--PKMYT1","ENSG00000183044","ENSG00000127564",1.0,1.0,1.0,1.0,0.865,0.0]
["TCGA_ESCA","TCGA-L5-A8NW-01A","5:SRD5A1:6662966:+:4:GRK4:3022414:+:fusion","SRD5A1--GRK4","ENSG00000145545","ENSG00000125388",2.0,1.0,1.0,1.0,0.169,0.0236869207003]
["TCGA_ESCA","TCGA-L5-A8NW-01A","8:PREX2:68138517:+:4:STIM2:27017711:+:fusion","PREX2--STIM2","ENSG00000046889","ENSG00000109689",1.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_ESCA","TCGA-L5-A8NW-01A","2:HDAC4:239176413:-:2:NDUFA10:240021412:-:rev","HDAC4--NDUFA10","ENSG00000068024","ENSG00000130414",2.0,1.0,1.0,1.0,0.64,"NA"]
["TCGA_ESCA","TCGA-L7-A6VZ-01A","20:MMP24-AS1:35272005:-:20:EIF6:35280118:-:rev","MMP24-AS1--EIF6","ENSG00000126005","ENSG00000242372",1.0,1.0,1.0,1.0,0.901,"NA"]
["TCGA_ESCA","TCGA-LN-A49K-01A","1:SIPA1L2:232443602:-:1:TTC13:230961303:-:reg","SIPA1L2--TTC13","ENSG00000116991","ENSG00000143643",4.0,1.0,1.0,1.0,0.874,8.29875518672E-4]
["TCGA_ESCA","TCGA-LN-A49L-01A","18:ZNF407:74920692:+:9:ELAVL2:23762249:-:fusion","ZNF407--ELAVL2","ENSG00000215421","ENSG00000107105",1.0,1.0,1.0,1.0,0.785,0.0]
["TCGA_ESCA","TCGA-LN-A49N-01A","19:VASP:45507776:+:19:PRAM1:8498289:-:strandcross","VASP--PRAM1","ENSG00000125753","ENSG00000133246",2.0,1.0,1.0,1.0,0.771,0.0]
["TCGA_ESCA","TCGA-LN-A49R-01A","19:ETHE1:43526201:-:10:ADK:74708321:+:fusion","ETHE1--ADK","ENSG00000105755","ENSG00000156110",2.0,1.0,1.0,1.0,0.887,0.0]
["TCGA_ESCA","TCGA-LN-A49R-01A","5:GFPT2:180316341:-:17:EIF4A1:7575119:+:fusion","GFPT2--EIF4A1","ENSG00000131459","ENSG00000277957",4.0,1.0,1.0,1.0,0.624,0.0]
["TCGA_ESCA","TCGA-LN-A49V-01A","13:EEF1AKMT1:20757455:-:13:SKA3:21155811:-:rev","EEF1AKMT1--SKA3","ENSG00000150456","ENSG00000165480",1.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_ESCA","TCGA-LN-A49W-01A","12:POLR3B:106463620:+:12:ANO4:100901646:+:rev","POLR3B--ANO4","ENSG00000013503","ENSG00000151572",5.0,1.0,1.0,1.0,0.349,0.00416319733555]
["TCGA_ESCA","TCGA-LN-A49X-01A","1:GON4L:155765000:-:3:TRAK1:42125420:+:fusion","GON4L--TRAK1","ENSG00000116580","ENSG00000182606",4.0,1.0,1.0,1.0,0.221,0.019512195122]
["TCGA_ESCA","TCGA-LN-A49X-01A","7:STK17A:43608400:+:7:HECW1:43541163:+:rev","STK17A--HECW1","ENSG00000164543","ENSG00000002746",4.0,1.0,1.0,1.0,0.691,"NA"]
["TCGA_ESCA","TCGA-LN-A49Y-01A","4:PDLIM5:94664035:+:2:MTERF4:241090044:-:fusion","PDLIM5--MTERF4","ENSG00000163110","ENSG00000122085",3.0,1.0,1.0,1.0,0.688,0.00840336134454]
["TCGA_ESCA","TCGA-LN-A4A1-01A","4:SMARCAD1:94253671:+:4:GRID2:93207404:+:rev","SMARCAD1--GRID2","ENSG00000163104","ENSG00000152208",6.0,1.0,1.0,1.0,0.878,0.0]
["TCGA_ESCA","TCGA-LN-A4A2-01A","1:MIR205HG:209429408:+:12:ATF7IP:14423909:+:fusion","MIR205HG--ATF7IP","ENSG00000230937","ENSG00000171681",3.0,2.0,1.0,1.0,0.974,0.0]
["TCGA_ESCA","TCGA-LN-A4A4-01A","12:TCTN1:110628918:+:2:GORASP2:170949539:+:fusion","TCTN1--GORASP2","ENSG00000204852","ENSG00000115806",3.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_ESCA","TCGA-LN-A4A4-01A","14:AL117355.1:30473522:-:11:NFRKB:129892870:-:fusion","AL117355.1--NFRKB","ENSG00000257636","ENSG00000170322",2.0,1.0,1.0,1.0,0.768,0.0]
["TCGA_ESCA","TCGA-LN-A4A6-01A","11:CPT1A:68815334:-:14:AL133372.3:29954885:+:fusion","CPT1A--AL133372.3","ENSG00000110090","ENSG00000257904",5.0,1.0,1.0,1.0,0.351,0.00192926045016]
["TCGA_ESCA","TCGA-LN-A4A8-01A","20:DIDO1:62937796:-:7:LANCL2:55411907:+:fusion","DIDO1--LANCL2","ENSG00000101191","ENSG00000132434",3.0,1.0,1.0,1.0,0.936,0.0]
["TCGA_ESCA","TCGA-LN-A4A9-01A","5:ADCY2:7414770:+:20:ITCH:34438474:+:fusion","ADCY2--ITCH","ENSG00000078295","ENSG00000078747",10.0,1.0,1.0,1.0,0.394,0.00473933649289]
["TCGA_ESCA","TCGA-LN-A4MR-01A","14:IFI27:94110797:+:14:CCDC88C:91379885:-:strandcross","IFI27--CCDC88C","ENSG00000165949","ENSG00000015133",2.0,1.0,1.0,1.0,0.542,0.0]
["TCGA_ESCA","TCGA-LN-A5U6-01A","1:LRIG2:113100488:+:8:ZNF250:144890403:-:fusion","LRIG2--ZNF250","ENSG00000198799","ENSG00000196150",6.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_ESCA","TCGA-LN-A5U7-01A","17:BAIAP2:81035308:+:17:RPTOR:80707841:+:rev","BAIAP2--RPTOR","ENSG00000175866","ENSG00000141564",2.0,1.0,1.0,1.0,0.777,"NA"]
["TCGA_ESCA","TCGA-LN-A7HV-01A","5:RHOBTB3:95783963:+:5:RFESD:95684595:+:rev","RHOBTB3--RFESD","ENSG00000164292","ENSG00000175449",9.0,3.0,2.0,2.0,0.848,"NA"]
["TCGA_ESCA","TCGA-LN-A7HZ-01A","14:HIF1A:61695839:+:14:RAD51B:68291884:+:reg","HIF1A--RAD51B","ENSG00000100644","ENSG00000182185",4.0,1.0,1.0,1.0,0.8,0.0]
["TCGA_ESCA","TCGA-LN-A8I0-01A","2:EHBP1:62874532:+:2:AC093159.1:62463839:+:rev","EHBP1--AC093159.1","ENSG00000115504","ENSG00000228541",3.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_ESCA","TCGA-LN-A8I1-01A","3:DCUN1D1:182980487:-:3:TBL1XR1-AS1:177038362:+:strandcross","DCUN1D1--TBL1XR1-AS1","ENSG00000043093","ENSG00000231310",26.0,1.0,1.0,1.0,0.79857082994267,0.0010101010101]
["TCGA_ESCA","TCGA-LN-A8I1-01A","3:RPL24:101682429:-:8:CNBD1:87205993:+:fusion","RPL24--CNBD1","ENSG00000114391","ENSG00000176571",5.0,1.0,1.0,1.0,0.855,0.00302114803625]
["TCGA_ESCA","TCGA-LN-A9FO-01A","17:EZH1:42703740:-:17:FOXK2:82585904:+:strandcross","EZH1--FOXK2","ENSG00000108799","ENSG00000141568",3.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_ESCA","TCGA-LN-A9FQ-01A","8:EXT1:118110085:-:14:LRFN5:41766854:+:fusion","EXT1--LRFN5","ENSG00000182197","ENSG00000165379",3.0,1.0,1.0,1.0,0.63,0.0]
["TCGA_ESCA","TCGA-M9-A5M8-01A","6:REPS1:138987530:-:6:FOXO3:108663455:+:strandcross","REPS1--FOXO3","ENSG00000135597","ENSG00000118689",3.0,1.0,1.0,1.0,0.83,0.0]
["TCGA_ESCA","TCGA-Q9-A6FW-01A","4:RAPGEF2:159210583:+:4:FNIP2:158825916:+:rev","RAPGEF2--FNIP2","ENSG00000109756","ENSG00000052795",2.0,1.0,2.0,1.0,0.889,"NA"]
["TCGA_ESCA","TCGA-R6-A6DQ-01B","15:LRRK1:100924729:+:15:LINC02253:97411192:+:rev","LRRK1--LINC02253","ENSG00000154237","ENSG00000259485",10.0,1.0,1.0,1.0,0.2,0.00989119683482]
["TCGA_ESCA","TCGA-R6-A6KZ-01A","1:LAMC2:183186431:+:17:TIMP2:78857646:-:fusion","LAMC2--TIMP2","ENSG00000058085","ENSG00000035862",2.0,1.0,1.0,1.0,0.228,0.0014367816092]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","11:PAK1:77374328:-:11:EMSY:76463821:+:strandcross","PAK1--EMSY","ENSG00000149269","ENSG00000158636",2.0,1.0,1.0,1.0,0.961,0.0]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","3:ARHGEF3:57035088:-:16:PRR14:30651596:+:fusion","ARHGEF3--PRR14","ENSG00000163947","ENSG00000156858",1.0,1.0,1.0,1.0,0.902,0.0]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","19:MYO9B:17102557:+:15:AC087477.5:96393431:-:fusion","MYO9B--AC087477.5","ENSG00000099331","ENSG00000259542",2.0,1.0,1.0,1.0,0.76,0.0]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","8:PSD3:18936034:-:8:XPO7:21966857:+:strandcross","PSD3--XPO7","ENSG00000156011","ENSG00000130227",4.0,1.0,1.0,1.0,0.989,0.0]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","17:CEP131:81189915:-:17:NPLOC4:81567533:-:rev","CEP131--NPLOC4","ENSG00000141577","ENSG00000182446",2.0,1.0,1.0,1.0,0.863,"NA"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","8:ATP6V1C1:103021225:+:8:AZIN1-AS1:102879895:+:rev","ATP6V1C1--AZIN1-AS1","ENSG00000155097","ENSG00000253320",1.0,1.0,1.0,1.0,0.983,"NA"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","9:PRSS3:33750727:+:9:B4GALT1-AS1:33177420:+:rev","PRSS3--B4GALT1-AS1","ENSG00000010438","ENSG00000233554",5.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_ESCA","TCGA-R6-A6Y2-01B","3:MRPL3:131487680:-:9:TTLL11:122039368:-:fusion","MRPL3--TTLL11","ENSG00000114686","ENSG00000175764",3.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_ESCA","TCGA-R6-A8W5-01B","1:S100A13:153631011:-:17:MAP3K14:45270563:-:fusion","S100A13--MAP3K14","ENSG00000189171","ENSG00000006062",8.0,1.0,1.0,1.0,0.941,0.0]
["TCGA_ESCA","TCGA-R6-A8W5-01B","17:JUP:41771647:-:17:P3H4:41806879:-:rev","JUP--P3H4","ENSG00000173801","ENSG00000141696",4.0,1.0,1.0,1.0,0.855,"NA"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","20:ZNFX1:49269942:-:20:B4GALT5:49656702:-:rev","ZNFX1--B4GALT5","ENSG00000124201","ENSG00000158470",3.0,1.0,1.0,1.0,0.586,"NA"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","7:RAPGEF5:22230846:-:7:TOMM7:22818048:-:rev","RAPGEF5--TOMM7","ENSG00000136237","ENSG00000196683",16.0,1.0,1.0,1.0,0.757861999281485,"NA"]
["TCGA_ESCA","TCGA-S8-A6BV-01A","17:JMJD6:76718733:-:3:GLT8D1:52696040:-:fusion","JMJD6--GLT8D1","ENSG00000070495","ENSG00000016864",9.0,1.0,1.0,1.0,0.946,0.0]
["TCGA_ESCA","TCGA-V5-A7RB-01A","19:LINC00662:27793000:-:10:SFMBT2:7285954:-:fusion","LINC00662--SFMBT2","ENSG00000261824","ENSG00000198879",22.0,1.0,1.0,1.0,0.806973330314759,0.0]
["TCGA_ESCA","TCGA-V5-A7RC-01B","18:PQLC1:79943329:-:18:ZNF407:74630967:+:strandcross","PQLC1--ZNF407","ENSG00000122490","ENSG00000215421",9.0,2.0,1.0,1.0,0.985,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","16:SEZ6L2:29873538:-:16:AC027130.1:19762016:-:reg","SEZ6L2--AC027130.1","ENSG00000174938","ENSG00000261195",31.0,1.0,1.0,1.0,0.82506281733065,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","17:GRB2:75405489:-:17:AC125421.2:73831963:-:reg","GRB2--AC125421.2","ENSG00000177885","ENSG00000265927",2.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","17:NOL11:67724193:+:17:KIF19:74328425:+:reg","NOL11--KIF19","ENSG00000130935","ENSG00000196169",366.0,2.0,2.0,2.0,0.96108465670667,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","17:TOM1L1:54937226:+:17:AC022706.1:35324654:+:rev","TOM1L1--AC022706.1","ENSG00000141198","ENSG00000267364",4.0,1.0,1.0,1.0,0.426,0.0]
["TCGA_ESCA","TCGA-V5-A7RE-01A","17:TOM1L1:54939020:+:17:AC022706.1:35324654:+:rev","TOM1L1--AC022706.1","ENSG00000141198","ENSG00000267364",291.0,1.0,1.0,1.0,0.990827407773593,0.0]
["TCGA_ESCA","TCGA-V5-AASW-01A","9:FAM129B:127578922:-:9:IDNK:83628873:+:strandcross","FAM129B--IDNK","ENSG00000136830","ENSG00000148057",4.0,1.0,1.0,1.0,0.371,0.0010718113612]
["TCGA_ESCA","TCGA-VR-A8EO-01A","1:UCHL5:193049746:-:1:SLC6A17:110191972:+:strandcross","UCHL5--SLC6A17","ENSG00000116750","ENSG00000197106",4.0,1.0,1.0,1.0,0.88,0.0]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","17:CSNK1D:82252434:-:17:TAF15:35824078:+:strandcross","CSNK1D--TAF15","ENSG00000141551","ENSG00000270647",2.0,1.0,1.0,1.0,0.759,0.0]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","18:TTC39C:24015038:+:18:AC091043.1:22098371:+:rev","TTC39C--AC091043.1","ENSG00000168234","ENSG00000263588",35.0,1.0,1.0,1.0,0.875472315951296,0.0]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","9:NAA35:85978381:+:3:MECOM:169381524:-:fusion","NAA35--MECOM","ENSG00000135040","ENSG00000085276",2.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_ESCA","TCGA-VR-A8EU-01A","1:RWDD3:95239909:+:2:WDR33:127771004:-:fusion","RWDD3--WDR33","ENSG00000122481","ENSG00000136709",2.0,1.0,1.0,1.0,0.631,0.0]
["TCGA_ESCA","TCGA-VR-A8EW-01A","12:ETV6:11650160:+:13:PSPC1:19677823:-:fusion","ETV6--PSPC1","ENSG00000139083","ENSG00000121390",4.0,1.0,1.0,1.0,0.886,0.00325732899023]
["TCGA_ESCA","TCGA-VR-A8EW-01A","18:MBP:77066298:-:3:ATR:142498774:-:fusion","MBP--ATR","ENSG00000197971","ENSG00000175054",3.0,1.0,1.0,1.0,0.366,0.00178412132025]
["TCGA_ESCA","TCGA-VR-A8EW-01A","7:NAMPT:106274946:-:12:CEP290:88059020:-:fusion","NAMPT--CEP290","ENSG00000105835","ENSG00000198707",2.0,1.0,1.0,1.0,0.359,0.00178412132025]
["TCGA_ESCA","TCGA-VR-A8EX-01A","8:COX6C:99893639:-:8:VPS13B:99871448:+:strandcross","COX6C--VPS13B","ENSG00000164919","ENSG00000132549",43.0,1.0,1.0,1.0,0.832206665677077,0.0082304526749]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","3:MRPL3:131487680:-:4:METAP1:99034230:+:fusion","MRPL3--METAP1","ENSG00000114686","ENSG00000164024",1.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","17:TMEM11:21214091:-:17:NATD1:21244224:-:rev","TMEM11--NATD1","ENSG00000178307","ENSG00000274180",23.0,1.0,1.0,1.0,0.857217588744362,"NA"]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","1:LPGAT1:211829059:-:1:INTS7:211946705:-:rev","LPGAT1--INTS7","ENSG00000123684","ENSG00000143493",2.0,1.0,1.0,1.0,0.966,"NA"]
["TCGA_ESCA","TCGA-VR-AA4D-01A","17:TMEM99:40819170:+:17:CDK12:39551038:+:rev","TMEM99--CDK12","ENSG00000167920","ENSG00000167258",9.0,1.0,1.0,1.0,0.408,7.19424460432E-4]
["TCGA_ESCA","TCGA-VR-AA4G-01A","12:RASSF8:25959148:+:12:ITPR2:26495260:-:strandcross","RASSF8--ITPR2","ENSG00000123094","ENSG00000123104",3.0,1.0,1.0,1.0,0.572,0.0117647058824]
["TCGA_ESCA","TCGA-VR-AA7D-01A","16:NLRC5:56989595:+:16:FAM192A:57173869:-:strandcross","NLRC5--FAM192A","ENSG00000140853","ENSG00000172775",2.0,1.0,2.0,1.0,0.358,0.00240577385726]
["TCGA_ESCA","TCGA-XP-A8T6-01A","15:CSNK1G1:64203082:-:15:SLC27A2:50197500:+:strandcross","CSNK1G1--SLC27A2","ENSG00000169118","ENSG00000140284",3.0,1.0,1.0,1.0,0.853,0.0]
["TCGA_ESCA","TCGA-XP-A8T8-01A","19:SBNO2:1174172:-:19:AC005943.1:1585214:-:rev","SBNO2--AC005943.1","ENSG00000064932","ENSG00000071655",2.0,1.0,1.0,1.0,0.597,"NA"]
["TCGA_ESCA","TCGA-Z6-AAPN-01A","2:PMS1:189784593:+:2:RAPGEF4:173016349:+:rev","PMS1--RAPGEF4","ENSG00000064933","ENSG00000091428",2.0,1.0,1.0,1.0,0.58,0.00203458799593]
["TCGA_ESCA","TCGA-ZR-A9CJ-01B","2:CAMKMT:44390305:+:2:REV1:99429945:-:strandcross","CAMKMT--REV1","ENSG00000143919","ENSG00000135945",2.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_GBM","TCGA-06-0125-01A","14:AF111169.4:76781400:-:14:POMT2:77280463:-:rev","AF111169.4--POMT2","ENSG00000259081","ENSG00000009830",9.0,1.0,1.0,1.0,0.582,"NA"]
["TCGA_GBM","TCGA-06-0138-01A","12:YEATS4:69370975:+:12:AC090673.1:65874189:-:strandcross","YEATS4--AC090673.1","ENSG00000127337","ENSG00000197301",132.0,1.0,1.0,1.0,0.96665794990414,0.0]
["TCGA_GBM","TCGA-06-0178-01A","2:ACP1:275201:+:21:LINC00316:45338878:-:fusion","ACP1--LINC00316","ENSG00000143727","ENSG00000237664",5.0,1.0,1.0,1.0,0.606,0.0]
["TCGA_GBM","TCGA-06-0210-01A","7:TMED4:44581449:-:7:AC005537.1:42972848:-:reg","TMED4--AC005537.1","ENSG00000158604","ENSG00000232006",6.0,2.0,2.0,2.0,0.947,0.0]
["TCGA_GBM","TCGA-06-0221-02A","12:C12orf4:4534157:-:2:AC093326.1:560078:+:fusion","C12orf4--AC093326.1","ENSG00000047621","ENSG00000233633",14.0,1.0,1.0,1.0,0.212,0.00925925925926]
["TCGA_GBM","TCGA-06-0744-01A","7:EGFR:55019365:+:7:AC073324.2:55238666:-:strandcross","EGFR--AC073324.2","ENSG00000146648","ENSG00000280890",2.0,4.0,3.0,3.0,0.933,0.0]
["TCGA_GBM","TCGA-06-0744-01A","7:EGFR:55019365:+:7:AC074351.1:54783108:+:rev","EGFR--AC074351.1","ENSG00000146648","ENSG00000234707",2.0,3.0,2.0,2.0,0.748,"NA"]
["TCGA_GBM","TCGA-06-2559-01A","12:CTDSP2:57846372:-:6:AL080314.2:106724660:-:fusion","CTDSP2--AL080314.2","ENSG00000175215","ENSG00000235142",27.0,1.0,1.0,1.0,0.778257290606289,0.00290697674419]
["TCGA_GBM","TCGA-06-2565-01A","1:PRKCZ:2073929:+:1:MTOR-AS1:11144667:+:reg","PRKCZ--MTOR-AS1","ENSG00000067606","ENSG00000225602",2.0,1.0,1.0,1.0,0.185,0.00451467268623]
["TCGA_GBM","TCGA-06-2569-01A","16:ZNRF1:75000095:+:19:LIPE-AS1:42651087:+:fusion","ZNRF1--LIPE-AS1","ENSG00000186187","ENSG00000213904",13.0,1.0,1.0,1.0,0.758,0.0]
["TCGA_GBM","TCGA-06-2570-01A","12:R3HDM2:57395749:-:12:AC068305.3:59056006:+:strandcross","R3HDM2--AC068305.3","ENSG00000179912","ENSG00000257443",14.0,1.0,1.0,1.0,0.749,0.001221001221]
["TCGA_GBM","TCGA-06-5856-01A","12:KDM2B:121574547:-:12:AC002070.1:119388267:-:reg","KDM2B--AC002070.1","ENSG00000089094","ENSG00000248636",5.0,1.0,1.0,1.0,0.597,0.00169635284139]
["TCGA_GBM","TCGA-06-5856-01A","12:SETD1B:121805216:+:12:AC083805.2:57842259:+:rev","SETD1B--AC083805.2","ENSG00000139718","ENSG00000257953",2.0,1.0,1.0,1.0,0.672,0.00169635284139]
["TCGA_GBM","TCGA-06-5856-01A","9:NFIB:14146689:-:12:AC138360.1:100852518:-:fusion","NFIB--AC138360.1","ENSG00000147862","ENSG00000257325",2.0,1.0,1.0,1.0,0.339,0.00254452926209]
["TCGA_GBM","TCGA-08-0386-01A","1:MTOR:11139304:-:14:LINC02318:95580768:+:fusion","MTOR--LINC02318","ENSG00000198793","ENSG00000258390",3.0,1.0,1.0,1.0,0.363,0.00332594235033]
["TCGA_GBM","TCGA-12-0616-01A","7:JAZF1:27991909:-:7:AC003092.1:94061456:+:strandcross","JAZF1--AC003092.1","ENSG00000153814","ENSG00000236453",8.0,1.0,1.0,1.0,0.404,0.00406504065041]
["TCGA_GBM","TCGA-14-0790-01B","9:KIAA2026:5968019:-:9:RIC1:5656583:+:strandcross","KIAA2026--RIC1","ENSG00000183354","ENSG00000107036",3.0,1.0,1.0,1.0,0.348,0.0]
["TCGA_GBM","TCGA-14-1402-02A","7:H2AFV:44835529:-:7:AC002429.2:95036781:-:rev","H2AFV--AC002429.2","ENSG00000105968","ENSG00000236197",29.0,1.0,1.0,1.0,0.746703889811787,0.00222222222222]
["TCGA_GBM","TCGA-16-0846-01A","12:CTDSP2:57846372:-:12:OS9:57715760:+:strandcross","CTDSP2--OS9","ENSG00000175215","ENSG00000135506",14.0,3.0,1.0,1.0,0.848,0.00177619893428]
["TCGA_GBM","TCGA-26-5132-01A","12:CPM:68855981:-:12:PDZRN4:41552656:+:strandcross","CPM--PDZRN4","ENSG00000135678","ENSG00000165966",5.0,1.0,1.0,1.0,0.833,0.0]
["TCGA_GBM","TCGA-26-5132-01A","12:PDZRN4:41555760:+:12:LINC02426:81954248:+:reg","PDZRN4--LINC02426","ENSG00000165966","ENSG00000257747",248.0,1.0,1.0,1.0,0.400101108073559,0.0]
["TCGA_GBM","TCGA-26-5135-01A","4:KIAA1211:56049299:+:4:AC105384.1:53916219:+:rev","KIAA1211--AC105384.1","ENSG00000109265","ENSG00000249706",2.0,1.0,1.0,1.0,0.678,0.00125313283208]
["TCGA_GBM","TCGA-27-1835-01A","12:CTDSP2:57826346:-:12:AC083805.1:57886696:-:rev","CTDSP2--AC083805.1","ENSG00000175215","ENSG00000245651",3.0,1.0,1.0,1.0,0.733,"NA"]
["TCGA_GBM","TCGA-27-2524-01A","21:EVA1C:32413013:+:2:CALM2:47170764:-:fusion","EVA1C--CALM2","ENSG00000166979","ENSG00000273269",3.0,1.0,1.0,1.0,0.204,0.00568181818182]
["TCGA_GBM","TCGA-27-2528-01A","17:IGFBP4:40454062:+:10:LINC00856:78396411:+:fusion","IGFBP4--LINC00856","ENSG00000141753","ENSG00000230417",17.0,1.0,1.0,1.0,0.28756927702893,0.00516351118761]
["TCGA_GBM","TCGA-28-5204-01A","8:ZFHX4-AS1:76502744:-:8:PMP2:81444989:-:rev","ZFHX4-AS1--PMP2","ENSG00000253661","ENSG00000147588",27.0,1.0,1.0,1.0,0.22107860499188,9.22509225092E-4]
["TCGA_GBM","TCGA-28-5207-01A","6:ZNF292:87155759:+:6:LINC01611:84444451:-:strandcross","ZNF292--LINC01611","ENSG00000188994","ENSG00000231776",7.0,1.0,1.0,1.0,0.59,0.00103412616339]
["TCGA_GBM","TCGA-32-2632-01A","14:NOVA1:26595410:-:14:YLPM1:74829213:+:strandcross","NOVA1--YLPM1","ENSG00000139910","ENSG00000119596",2.0,2.0,2.0,2.0,0.955,0.0]
["TCGA_GBM","TCGA-41-2571-01A","12:AC008035.1:46571412:+:12:DTX3:57608520:+:reg","AC008035.1--DTX3","ENSG00000272369","ENSG00000178498",187.0,1.0,1.0,1.0,0.912823645157175,0.0]
["TCGA_GBM","TCGA-41-2571-01A","12:FRS2:69470530:+:12:ARHGEF25:57610570:+:rev","FRS2--ARHGEF25","ENSG00000166225","ENSG00000240771",3.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_GBM","TCGA-41-2571-01A","12:LINC01481:70242797:-:12:SLC38A4:46793178:-:reg","LINC01481--SLC38A4","ENSG00000257815","ENSG00000139209",2.0,1.0,1.0,1.0,0.209,0.00944386149003]
["TCGA_GBM","TCGA-41-3915-01A","8:ZFPM2:105318981:+:8:CHMP4C:81753064:+:rev","ZFPM2--CHMP4C","ENSG00000169946","ENSG00000164695",2.0,1.0,1.0,1.0,0.226,0.00371747211896]
["TCGA_GBM","TCGA-41-4097-01A","3:MAGI1:66037996:-:3:MAGI1-AS1:65914091:+:strandcross","MAGI1--MAGI1-AS1","ENSG00000151276","ENSG00000240175",15.0,2.0,2.0,2.0,0.879,0.0]
["TCGA_HNSC","TCGA-BA-4076-01A","6:AIG1:143165183:+:6:AL021408.1:132098931:+:rev","AIG1--AL021408.1","ENSG00000146416","ENSG00000236166",16.0,1.0,1.0,1.0,0.87348316866632,0.00487804878049]
["TCGA_HNSC","TCGA-BA-5559-01A","3:SLC9A9:143693192:-:12:AC012038.1:42989847:-:fusion","SLC9A9--AC012038.1","ENSG00000181804","ENSG00000257373",1.0,1.0,1.0,1.0,0.973,0.00168067226891]
["TCGA_HNSC","TCGA-BA-6871-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",7.0,23.0,20.0,15.0,0.946,"NA"]
["TCGA_HNSC","TCGA-BA-7269-01A","8:ZFPM2-AS1:105927651:-:2:AC107057.1:5550055:-:fusion","ZFPM2-AS1--AC107057.1","ENSG00000251003","ENSG00000232835",6.0,1.0,1.0,1.0,0.96,0.0]
["TCGA_HNSC","TCGA-BA-A4II-01A","17:SCPEP1:56997055:+:17:LINC01482:68750115:+:reg","SCPEP1--LINC01482","ENSG00000121064","ENSG00000267659",2.0,1.0,1.0,1.0,0.72,0.00196078431373]
["TCGA_HNSC","TCGA-BA-A6DE-01A","4:UBE2K:39698390:+:4:PDS5A:39825488:-:strandcross","UBE2K--PDS5A","ENSG00000078140","ENSG00000121892",2.0,1.0,1.0,1.0,0.611,0.00520833333333]
["TCGA_HNSC","TCGA-BB-4223-01A","15:SPG11:44589252:-:15:JMJD7-PLA2G4B:41834740:+:strandcross","SPG11--JMJD7-PLA2G4B","ENSG00000104133","ENSG00000243789",2.0,1.0,1.0,1.0,0.656,0.021645021645]
["TCGA_HNSC","TCGA-BB-4228-01A","17:TTC19:16026702:+:17:ADORA2B:15974679:+:rev","TTC19--ADORA2B","ENSG00000011295","ENSG00000170425",2.0,1.0,1.0,1.0,0.877,"NA"]
["TCGA_HNSC","TCGA-BB-A5HU-01A","17:KANSL1:46192823:-:17:KRT16:41612724:-:reg","KANSL1--KRT16","ENSG00000120071","ENSG00000186832",14.0,1.0,1.0,1.0,0.796,0.0]
["TCGA_HNSC","TCGA-CN-4739-01A","2:AC098820.1:216498607:-:2:PSMD1:231146240:+:strandcross","AC098820.1--PSMD1","ENSG00000232485","ENSG00000173692",9.0,1.0,1.0,1.0,0.559,0.00826446280992]
["TCGA_HNSC","TCGA-CN-5359-01A","2:COBLL1:164841156:-:2:RAPGEF4-AS1:172679025:-:rev","COBLL1--RAPGEF4-AS1","ENSG00000082438","ENSG00000228016",11.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_HNSC","TCGA-CN-5367-01A","4:PDLIM5:94640450:+:4:AF250324.1:189821665:-:strandcross","PDLIM5--AF250324.1","ENSG00000163110","ENSG00000245685",27.0,1.0,1.0,1.0,0.623732625339099,0.00471698113208]
["TCGA_HNSC","TCGA-CN-5369-01A","19:ZNF627:11597630:+:19:AC005757.1:45136350:-:strandcross","ZNF627--AC005757.1","ENSG00000198551","ENSG00000267044",11.0,1.0,1.0,1.0,0.267,0.0133729569094]
["TCGA_HNSC","TCGA-CN-6020-01A","8:NSD3:38304587:-:8:AC084024.3:38163310:+:strandcross","NSD3--AC084024.3","ENSG00000147548","ENSG00000253356",5.0,1.0,1.0,1.0,0.94,0.0025974025974]
["TCGA_HNSC","TCGA-CN-6996-01A","12:TMCC3:94650353:-:12:NR2C1:95025255:-:rev","TMCC3--NR2C1","ENSG00000057704","ENSG00000120798",2.0,1.0,1.0,1.0,0.896,"NA"]
["TCGA_HNSC","TCGA-CN-A49C-01A","11:AP002360.2:76444278:-:11:PGM2L1:74347337:-:reg","AP002360.2--PGM2L1","ENSG00000255135","ENSG00000165434",3.0,1.0,1.0,1.0,0.794,0.0028901734104]
["TCGA_HNSC","TCGA-CN-A641-01A","18:ESCO1:21560859:-:18:AC090912.1:22704920:-:rev","ESCO1--AC090912.1","ENSG00000141446","ENSG00000265943",2.0,1.0,1.0,1.0,0.759,0.00977995110024]
["TCGA_HNSC","TCGA-CQ-A4C9-01A","1:GNB1:1890820:-:1:LINC01226:31536272:+:strandcross","GNB1--LINC01226","ENSG00000078369","ENSG00000284543",3.0,1.0,1.0,1.0,0.413,0.0136612021858]
["TCGA_HNSC","TCGA-CQ-A4CB-01A","8:ZC3H3:143536257:-:8:AC084125.2:144498161:-:rev","ZC3H3--AC084125.2","ENSG00000014164","ENSG00000255182",2.0,1.0,1.0,1.0,0.961,"NA"]
["TCGA_HNSC","TCGA-CR-6467-01A","5:LARP1:154756193:+:5:AC109466.1:164354141:+:reg","LARP1--AC109466.1","ENSG00000155506","ENSG00000241956",2.0,1.0,1.0,1.0,0.435,0.00453001132503]
["TCGA_HNSC","TCGA-CR-6478-01A","15:AC025580.2:45448801:+:15:B2M:44715423:+:rev","AC025580.2--B2M","ENSG00000259354","ENSG00000166710",2.0,1.0,1.0,1.0,0.935,"NA"]
["TCGA_HNSC","TCGA-CR-6484-01A","11:PRRG4:32836821:+:2:AC010884.1:104945077:-:fusion","PRRG4--AC010884.1","ENSG00000135378","ENSG00000224509",13.0,1.0,1.0,1.0,0.382,0.0133689839572]
["TCGA_HNSC","TCGA-CR-7367-01A","8:PSD3:18556209:-:8:AC012574.1:23788493:+:strandcross","PSD3--AC012574.1","ENSG00000156011","ENSG00000253471",4.0,1.0,1.0,1.0,0.882,0.0]
["TCGA_HNSC","TCGA-CR-7377-01A","19:ILF3:10671535:+:19:AC008567.3:9539406:+:rev","ILF3--AC008567.3","ENSG00000129351","ENSG00000278611",4.0,1.0,1.0,1.0,0.241,0.0202429149798]
["TCGA_HNSC","TCGA-CR-7402-01A","19:ZNF534:52431489:+:19:ATF5:49929243:+:rev","ZNF534--ATF5","ENSG00000198633","ENSG00000169136",2.0,1.0,1.0,1.0,0.918,0.0]
["TCGA_HNSC","TCGA-CR-7402-01A","7:SVOPL:138701178:-:7:ZC3HAV1:139064999:-:rev","SVOPL--ZC3HAV1","ENSG00000157703","ENSG00000105939",2.0,1.0,1.0,1.0,0.95,"NA"]
["TCGA_HNSC","TCGA-CV-5435-01A","8:CCAT1:127218810:-:8:CASC8:127420963:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",5.0,7.0,6.0,5.0,0.68,"NA"]
["TCGA_HNSC","TCGA-CV-5970-01A","12:RNF10:120562982:+:12:KRT1:52675744:-:strandcross","RNF10--KRT1","ENSG00000022840","ENSG00000167768",2.0,1.0,1.0,1.0,0.926,0.00124223602484]
["TCGA_HNSC","TCGA-CV-6436-01A","2:KANSL3:96636921:-:2:COX5B:97647067:+:strandcross","KANSL3--COX5B","ENSG00000114982","ENSG00000135940",2.0,1.0,1.0,1.0,0.928,0.0]
["TCGA_HNSC","TCGA-CV-6936-01A","11:HSD17B12:43754121:+:11:AC068205.1:43672991:+:rev","HSD17B12--AC068205.1","ENSG00000283341","ENSG00000283217",1.0,1.0,2.0,1.0,0.861,"NA"]
["TCGA_HNSC","TCGA-CV-6939-01A","5:ARHGAP26:143057747:+:1:DCAF6:168063621:+:fusion","ARHGAP26--DCAF6","ENSG00000145819","ENSG00000143164",2.0,1.0,1.0,1.0,0.866,0.00471698113208]
["TCGA_HNSC","TCGA-CV-6948-01A","6:SGK1:134317392:-:6:LINC01010:134502788:+:strandcross","SGK1--LINC01010","ENSG00000118515","ENSG00000236700",8.0,1.0,1.0,1.0,0.455,0.0120724346076]
["TCGA_HNSC","TCGA-CV-6960-01A","X:ATP11C:139814878:-:X:AC239727.1:143509609:+:strandcross","ATP11C--AC239727.1","ENSG00000101974","ENSG00000227303",2.0,1.0,1.0,1.0,0.663,0.00591715976331]
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["TCGA_HNSC","TCGA-CV-A6K1-01A","16:SMG1:18890863:-:16:AC099518.4:19064039:-:rev","SMG1--AC099518.4","ENSG00000157106","ENSG00000261465",2.0,1.0,1.0,1.0,0.851,"NA"]
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["TCGA_HNSC","TCGA-HD-8635-01A","1:MAN1A2:117420649:+:1:IGSF3:116666956:-:strandcross","MAN1A2--IGSF3","ENSG00000198162","ENSG00000143061",1.0,1.0,1.0,1.0,0.98,0.0]
["TCGA_HNSC","TCGA-IQ-A61H-01A","8:IKBKB:42272205:+:8:AP003472.1:100381771:-:strandcross","IKBKB--AP003472.1","ENSG00000104365","ENSG00000253824",8.0,1.0,1.0,1.0,0.902,0.0]
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["TCGA_HNSC","TCGA-P3-A6T7-01A","3:SLC25A26:66263379:+:3:MAGI1-AS1:65914091:+:rev","SLC25A26--MAGI1-AS1","ENSG00000144741","ENSG00000240175",3.0,1.0,1.0,1.0,0.958,"NA"]
["TCGA_HNSC","TCGA-QK-A6II-01A","8:ELOC:73955911:-:9:LRSAM1:127501010:+:fusion","ELOC--LRSAM1","ENSG00000154582","ENSG00000148356",4.0,1.0,1.0,1.0,0.988,0.0]
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["TCGA_KICH","TCGA-KM-8440-01A","6:NCOA7:125855240:+:6:TPD52L1:125229118:+:rev","NCOA7--TPD52L1","ENSG00000111912","ENSG00000111907",1.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_KICH","TCGA-KM-8639-01A","19:ZNF160:53103265:-:19:ZNF415:53123655:-:rev","ZNF160--ZNF415","ENSG00000170949","ENSG00000170954",2.0,2.0,2.0,1.0,0.882,"NA"]
["TCGA_KIRC","TCGA-A3-3313-01A","6:FKBP5:35642720:-:6:AL360175.1:50520983:+:strandcross","FKBP5--AL360175.1","ENSG00000096060","ENSG00000233470",35.0,1.0,1.0,1.0,0.762580492386606,0.00531914893617]
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["TCGA_KIRC","TCGA-B0-4712-01A","5:ABLIM3:149142108:+:5:AC091940.1:149106768:+:rev","ABLIM3--AC091940.1","ENSG00000173210","ENSG00000250072",1.0,1.0,1.0,1.0,0.975,"NA"]
["TCGA_KIRC","TCGA-B0-4828-01A","3:ZBTB20:115071219:-:3:AC063944.1:107382176:-:reg","ZBTB20--AC063944.1","ENSG00000181722","ENSG00000239828",2.0,1.0,1.0,1.0,0.788,0.0167597765363]
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["TCGA_KIRC","TCGA-B0-5109-01A","8:CCAT1:127218810:-:8:CASC8:127290060:-:rev","CCAT1--CASC8","ENSG00000247844","ENSG00000246228",8.0,23.0,20.0,15.0,0.551,"NA"]
["TCGA_KIRC","TCGA-B0-5400-01A","22:LINC01315:42368715:-:6:BLOC1S5-TXNDC5:8062616:-:fusion","LINC01315--BLOC1S5-TXNDC5","ENSG00000229891","ENSG00000259040",2.0,1.0,1.0,1.0,0.551,0.0120689655172]
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["TCGA_KIRC","TCGA-B4-5378-01A","20:LAMA5:62325316:-:19:SLC44A2:10643279:+:fusion","LAMA5--SLC44A2","ENSG00000130702","ENSG00000129353",2.0,2.0,1.0,1.0,0.848,0.00460829493088]
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["TCGA_KIRC","TCGA-BP-4343-01A","11:AP000439.2:69479696:-:11:ORAOV1:69673321:-:rev","AP000439.2--ORAOV1","ENSG00000255774","ENSG00000149716",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_KIRC","TCGA-BP-4760-01A","13:ITM2B:48258947:+:9:GSN:121318406:+:fusion","ITM2B--GSN","ENSG00000136156","ENSG00000148180",2.0,1.0,1.0,1.0,0.716,0.003861003861]
["TCGA_KIRC","TCGA-BP-4790-01A","3:TBL1XR1:177197121:-:3:KCNMB2-AS1:178729392:-:rev","TBL1XR1--KCNMB2-AS1","ENSG00000177565","ENSG00000237978",3.0,1.0,1.0,1.0,0.932,0.0]
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["TCGA_KIRP","TCGA-G7-6792-01A","2:CRIM1:36442735:+:2:LINC01317:34286643:+:rev","CRIM1--LINC01317","ENSG00000150938","ENSG00000203386",29.0,1.0,1.0,1.0,0.682270412090336,0.00952380952381]
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["TCGA_KIRP","TCGA-IA-A40X-01A","6:EZR:158818082:-:3:SELENOK:53885912:-:fusion","EZR--SELENOK","ENSG00000092820","ENSG00000113811",2.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_KIRP","TCGA-P4-A5EB-01A","22:AL117329.1:47635353:+:22:Z97056.1:38424813:+:rev","AL117329.1--Z97056.1","ENSG00000224271","ENSG00000228620",4.0,1.0,1.0,1.0,0.297,0.034375]
["TCGA_KIRP","TCGA-Q2-A5QZ-01A","6:BICRAL:42782101:+:2:PMS1:189863743:+:fusion","BICRAL--PMS1","ENSG00000112624","ENSG00000064933",14.0,1.0,1.0,1.0,0.72,0.0]
["TCGA_KIRP","TCGA-UZ-A9PN-01A","5:RETREG1:16508578:-:5:TERT:1282624:-:reg","RETREG1--TERT","ENSG00000154153","ENSG00000164362",14.0,1.0,1.0,1.0,0.192,0.0460992907801]
["TCGA_KIRP","TCGA-UZ-A9PN-01A","5:RETREG1:16565763:-:5:TERT:1282624:-:reg","RETREG1--TERT","ENSG00000154153","ENSG00000164362",5.0,1.0,1.0,1.0,0.764,0.00709219858156]
["TCGA_LAML","TCGA-AB-2805-03A","9:PIP5K1B:68940790:+:9:RIC1:5689959:+:rev","PIP5K1B--RIC1","ENSG00000107242","ENSG00000107036",2.0,1.0,1.0,1.0,0.87,0.0]
["TCGA_LAML","TCGA-AB-2811-03B","17:ABR:1050050:-:10:PWWP2B:132404626:+:fusion","ABR--PWWP2B","ENSG00000159842","ENSG00000171813",2.0,1.0,1.0,1.0,0.938,0.0]
["TCGA_LAML","TCGA-AB-2811-03B","19:OAZ1:2269744:+:22:SCO2:50524424:-:fusion","OAZ1--SCO2","ENSG00000104904","ENSG00000130489",3.0,3.0,2.0,1.0,0.503,0.00159744408946]
["TCGA_LAML","TCGA-AB-2813-03A","5:SREK1:66144537:+:5:LINC02057:61252889:-:strandcross","SREK1--LINC02057","ENSG00000153914","ENSG00000249279",3.0,1.0,1.0,1.0,0.345,0.00338409475465]
["TCGA_LAML","TCGA-AB-2832-03A","19:OAZ1:2269744:+:19:LPAR2:19627504:-:strandcross","OAZ1--LPAR2","ENSG00000104904","ENSG00000064547",2.0,1.0,1.0,1.0,0.943,0.0]
["TCGA_LAML","TCGA-AB-2834-03A","19:ELL:18472835:-:11:KMT2A:118488614:+:fusion","ELL--KMT2A","ENSG00000105656","ENSG00000118058",2.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_LAML","TCGA-AB-2845-03B","1:RCC1:28508905:+:19:DNMT1:10156509:-:fusion","RCC1--DNMT1","ENSG00000180198","ENSG00000130816",2.0,1.0,1.0,1.0,0.837,0.0]
["TCGA_LAML","TCGA-AB-2863-03A","8:ASAP1:130358017:-:12:VEZT:95262906:+:fusion","ASAP1--VEZT","ENSG00000153317","ENSG00000028203",1.0,1.0,1.0,1.0,0.878,0.0]
["TCGA_LAML","TCGA-AB-2867-03A","8:YWHAZ:100951929:-:8:AZIN1:102858150:-:rev","YWHAZ--AZIN1","ENSG00000164924","ENSG00000155096",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_LAML","TCGA-AB-2897-03A","17:AC141424.1:413129:-:17:VPS53:601896:-:rev","AC141424.1--VPS53","ENSG00000241525","ENSG00000141252",2.0,1.0,1.0,1.0,0.807,"NA"]
["TCGA_LAML","TCGA-AB-2917-03A","3:SHQ1:72844359:-:3:FOXP1:70966056:-:reg","SHQ1--FOXP1","ENSG00000144736","ENSG00000114861",4.0,1.0,1.0,1.0,0.573,0.0]
["TCGA_LAML","TCGA-AB-2927-03A","9:TRIM14:98099931:-:1:LY9:160813636:+:fusion","TRIM14--LY9","ENSG00000106785","ENSG00000122224",1.0,1.0,1.0,1.0,0.958,0.0]
["TCGA_LAML","TCGA-AB-2930-03A","17:MPO:58279008:-:15:LPCAT4:34362321:-:fusion","MPO--LPCAT4","ENSG00000005381","ENSG00000176454",2.0,1.0,1.0,1.0,0.591,0.0]
["TCGA_LAML","TCGA-AB-2938-03A","8:ST3GAL1:133545774:-:6:HBS1L:135002842:-:fusion","ST3GAL1--HBS1L","ENSG00000008513","ENSG00000112339",1.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_LAML","TCGA-AB-2964-03A","19:AC092295.1:36534992:+:19:ZNF543:57323682:+:reg","AC092295.1--ZNF543","ENSG00000228629","ENSG00000178229",4.0,1.0,1.0,1.0,0.927,0.0]
["TCGA_LAML","TCGA-AB-2970-03A","4:FIP1L1:53399839:+:17:TAF15:35846906:+:fusion","FIP1L1--TAF15","ENSG00000145216","ENSG00000270647",1.0,1.0,1.0,1.0,0.833,0.0]
["TCGA_LAML","TCGA-AB-2976-03A","2:ORMDL1:189783014:-:1:FAM20B:179043715:+:fusion","ORMDL1--FAM20B","ENSG00000128699","ENSG00000116199",2.0,1.0,1.0,1.0,0.924,0.0]
["TCGA_LGG","TCGA-CS-4943-01A","8:FAM135B:138496671:-:8:AC046195.2:137928681:+:strandcross","FAM135B--AC046195.2","ENSG00000147724","ENSG00000254361",6.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_LGG","TCGA-CS-6188-01A","1:ASAP3:23431035:-:5:ZSWIM6:61521263:+:fusion","ASAP3--ZSWIM6","ENSG00000088280","ENSG00000130449",3.0,1.0,1.0,1.0,0.854,0.00544959128065]
["TCGA_LGG","TCGA-DB-5277-01A","19:AC010618.3:17511343:-:9:NUP214:131215212:+:fusion","AC010618.3--NUP214","ENSG00000269439","ENSG00000126883",131.0,1.0,1.0,1.0,0.984223803679607,0.0]
["TCGA_LGG","TCGA-DB-A75P-01A","17:YWHAE:1400047:-:17:EME1:50376066:+:strandcross","YWHAE--EME1","ENSG00000108953","ENSG00000154920",2.0,1.0,1.0,1.0,0.672,0.0201342281879]
["TCGA_LGG","TCGA-DH-A669-01A","4:CBR4:169002071:-:4:LINC01365:119802892:-:reg","CBR4--LINC01365","ENSG00000145439","ENSG00000250772",3.0,1.0,1.0,1.0,0.887,0.00200400801603]
["TCGA_LGG","TCGA-DH-A669-02A","4:CTBP1:1215991:-:4:AC097478.1:89587821:+:strandcross","CTBP1--AC097478.1","ENSG00000159692","ENSG00000251095",7.0,2.0,2.0,2.0,0.442,0.0197740112994]
["TCGA_LGG","TCGA-DU-5853-01A","17:RAI1:17681793:+:11:AP005135.1:135061947:-:fusion","RAI1--AP005135.1","ENSG00000108557","ENSG00000255512",1.0,1.0,1.0,1.0,0.82,0.00355871886121]
["TCGA_LGG","TCGA-DU-5853-01A","12:CS:56300160:-:12:CNPY2:56311414:-:rev","CS--CNPY2","ENSG00000062485","ENSG00000144785",1.0,2.0,1.0,1.0,0.869,"NA"]
["TCGA_LGG","TCGA-DU-5871-01A","4:PDLIM5:94586444:+:4:BMPR1B-AS1:94744094:-:strandcross","PDLIM5--BMPR1B-AS1","ENSG00000163110","ENSG00000249599",49.0,1.0,1.0,1.0,0.675124470572877,0.00332225913621]
["TCGA_LGG","TCGA-DU-6396-01A","7:TRIM24:138504408:+:7:AKR1D1:138088601:+:rev","TRIM24--AKR1D1","ENSG00000122779","ENSG00000122787",15.0,1.0,1.0,1.0,0.6,"NA"]
["TCGA_LGG","TCGA-DU-6542-01A","1:TEX35:178547163:+:1:RPS6KC1:213261558:+:reg","TEX35--RPS6KC1","ENSG00000240021","ENSG00000136643",2.0,1.0,1.0,1.0,0.589,0.0423076923077]
["TCGA_LGG","TCGA-DU-7007-01A","12:AC022075.1:10364033:+:12:PPFIBP1:27633362:+:reg","AC022075.1--PPFIBP1","ENSG00000245648","ENSG00000110841",2.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_LGG","TCGA-DU-7007-01A","8:RRM2B:102238827:-:8:BAALC-AS1:103268472:-:rev","RRM2B--BAALC-AS1","ENSG00000048392","ENSG00000247081",5.0,1.0,1.0,1.0,0.276,0.0252100840336]
["TCGA_LGG","TCGA-DU-7018-01A","11:C11orf95:63765807:-:11:NRXN2:64635452:-:rev","C11orf95--NRXN2","ENSG00000188070","ENSG00000110076",3.0,1.0,1.0,1.0,0.919,"NA"]
["TCGA_LGG","TCGA-DU-7299-01A","15:CHD2:92901299:+:1:KHDRBS1:32030298:+:fusion","CHD2--KHDRBS1","ENSG00000279765","ENSG00000121774",2.0,1.0,1.0,1.0,0.939,0.00281690140845]
["TCGA_LGG","TCGA-DU-7304-02A","11:FADS2:61857530:+:11:AP003716.1:67888153:+:reg","FADS2--AP003716.1","ENSG00000134824","ENSG00000251637",28.0,2.0,1.0,1.0,0.646227791613104,0.0]
["TCGA_LGG","TCGA-DU-A5TP-01A","17:NF1:31265339:+:17:EVI2B:31305630:-:strandcross","NF1--EVI2B","ENSG00000196712","ENSG00000185862",3.0,2.0,1.0,1.0,0.903,0.0]
["TCGA_LGG","TCGA-DU-A5TY-01A","12:TBC1D15:71873003:+:7:WIPF3:29883850:+:fusion","TBC1D15--WIPF3","ENSG00000121749","ENSG00000122574",2.0,1.0,1.0,1.0,0.794,0.0]
["TCGA_LGG","TCGA-DU-A5TY-01A","7:FAM126A:23013925:-:7:AC023669.1:46263900:+:strandcross","FAM126A--AC023669.1","ENSG00000122591","ENSG00000229459",5.0,1.0,1.0,1.0,0.33,0.0144927536232]
["TCGA_LGG","TCGA-DU-A5TY-01A","7:TPST1:66241270:+:7:AC009468.2:53515276:-:strandcross","TPST1--AC009468.2","ENSG00000169902","ENSG00000234105",3.0,1.0,1.0,1.0,0.966,0.0]
["TCGA_LGG","TCGA-DU-A7TI-01A","19:SLC44A2:10602561:+:19:RFXANK:19192960:+:reg","SLC44A2--RFXANK","ENSG00000129353","ENSG00000064490",3.0,1.0,1.0,1.0,0.303,0.031185031185]
["TCGA_LGG","TCGA-DU-A7TJ-01A","7:EGFR:55173124:+:7:AC074351.1:54783108:+:rev","EGFR--AC074351.1","ENSG00000146648","ENSG00000234707",5.0,1.0,1.0,1.0,0.818,"NA"]
["TCGA_LGG","TCGA-E1-5307-01A","X:HUWE1:53607523:-:X:SLITRK4:143631158:-:rev","HUWE1--SLITRK4","ENSG00000086758","ENSG00000179542",4.0,1.0,1.0,1.0,0.746,0.032]
["TCGA_LGG","TCGA-E1-A7YE-01A","14:KTN1:55619312:+:14:AL365295.1:53687199:+:rev","KTN1--AL365295.1","ENSG00000126777","ENSG00000237356",15.0,1.0,1.0,1.0,0.422,0.0203619909502]
["TCGA_LGG","TCGA-E1-A7YJ-01A","7:EGFR:55200413:+:7:AC074351.1:54804666:+:rev","EGFR--AC074351.1","ENSG00000146648","ENSG00000234707",4.0,1.0,1.0,1.0,0.797,"NA"]
["TCGA_LGG","TCGA-E1-A7YL-01A","19:AC008969.1:58003046:+:18:AC091151.1:45549994:+:fusion","AC008969.1--AC091151.1","ENSG00000176593","ENSG00000267354",4.0,1.0,1.0,1.0,0.158,0.0332541567696]
["TCGA_LGG","TCGA-FG-5963-02A","11:TYR:89191418:+:11:AC027779.1:13827280:-:strandcross","TYR--AC027779.1","ENSG00000077498","ENSG00000254927",12.0,2.0,2.0,2.0,0.498,0.00993377483444]
["TCGA_LGG","TCGA-FG-A4MX-01A","13:IL17D:20704291:+:13:ZMYM2:20058575:+:rev","IL17D--ZMYM2","ENSG00000172458","ENSG00000121741",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_LGG","TCGA-FG-A6J1-01A","1:CTSS:150748165:-:1:AL391069.2:151280258:-:rev","CTSS--AL391069.2","ENSG00000163131","ENSG00000232671",2.0,1.0,1.0,1.0,0.988,"NA"]
["TCGA_LGG","TCGA-HT-7472-01A","22:KIAA1644:44285428:-:19:AC021092.1:44108337:-:fusion","KIAA1644--AC021092.1","ENSG00000138944","ENSG00000186019",10.0,1.0,1.0,1.0,0.935,0.00673400673401]
["TCGA_LGG","TCGA-HT-7603-01A","19:APOE:44907952:+:16:TRAP1:3678545:-:fusion","APOE--TRAP1","ENSG00000130203","ENSG00000126602",2.0,1.0,1.0,1.0,0.153,0.0990990990991]
["TCGA_LGG","TCGA-HT-7686-01A","21:MRPS6:34073745:+:21:ITSN1:33718797:+:rev","MRPS6--ITSN1","ENSG00000243927","ENSG00000205726",2.0,1.0,1.0,1.0,0.733,"NA"]
["TCGA_LGG","TCGA-HT-7874-01A","1:ZMPSTE24:40260985:+:1:RLF:40231517:+:rev","ZMPSTE24--RLF","ENSG00000084073","ENSG00000117000",2.0,1.0,1.0,1.0,0.937,"NA"]
["TCGA_LGG","TCGA-HT-8018-01A","15:USP3:63504830:+:15:SECISBP2L:49037769:-:strandcross","USP3--SECISBP2L","ENSG00000140455","ENSG00000138593",4.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_LGG","TCGA-HT-8104-01A","8:PSD3:19084206:-:13:SMIM2-AS1:44238828:+:fusion","PSD3--SMIM2-AS1","ENSG00000156011","ENSG00000227258",7.0,1.0,1.0,1.0,0.759,0.0042735042735]
["TCGA_LGG","TCGA-HT-A614-01A","17:SSH2:29929938:-:11:AP005135.1:135061947:-:fusion","SSH2--AP005135.1","ENSG00000141298","ENSG00000255512",2.0,1.0,1.0,1.0,0.692,0.00706713780919]
["TCGA_LGG","TCGA-HT-A61C-01A","7:MET:116700284:+:7:CFTR:117712341:+:reg","MET--CFTR","ENSG00000105976","ENSG00000001626",10.0,1.0,1.0,1.0,0.9,0.00791556728232]
["TCGA_LGG","TCGA-HW-7493-01A","1:XPR1:180682411:+:1:OVAAL:180562204:+:rev","XPR1--OVAAL","ENSG00000143324","ENSG00000236719",5.0,8.0,9.0,6.0,0.854,"NA"]
["TCGA_LGG","TCGA-P5-A5EU-01A","10:CCDC186:114129891:-:10:AL355512.1:110429010:-:reg","CCDC186--AL355512.1","ENSG00000165813","ENSG00000273143",7.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_LGG","TCGA-P5-A5EZ-01A","4:RNF4:2596329:+:4:AC016687.2:33979740:+:reg","RNF4--AC016687.2","ENSG00000063978","ENSG00000250723",21.0,1.0,1.0,1.0,0.632490679361512,0.0183486238532]
["TCGA_LGG","TCGA-P5-A735-01A","11:HYOU1:119057020:-:11:DPAGT1:119097297:-:rev","HYOU1--DPAGT1","ENSG00000149428","ENSG00000172269",1.0,1.0,1.0,1.0,0.856,"NA"]
["TCGA_LGG","TCGA-QH-A65Z-01A","1:FUBP1:77978885:-:6:AL583803.1:130697518:+:fusion","FUBP1--AL583803.1","ENSG00000162613","ENSG00000229923",5.0,1.0,1.0,1.0,0.446,0.023178807947]
["TCGA_LGG","TCGA-R8-A73M-01A","14:NAA30:57399883:+:14:DICER1-AS1:95179499:+:reg","NAA30--DICER1-AS1","ENSG00000139977","ENSG00000235706",6.0,1.0,1.0,1.0,0.864,0.0]
["TCGA_LGG","TCGA-S9-A6U6-01A","2:ARPC2:218228850:+:2:LINC00607:215641819:-:strandcross","ARPC2--LINC00607","ENSG00000163466","ENSG00000235770",14.0,1.0,1.0,1.0,0.576,0.025]
["TCGA_LGG","TCGA-S9-A7IS-01A","4:ADGRA3:22515528:-:4:AC024132.2:27138446:-:rev","ADGRA3--AC024132.2","ENSG00000152990","ENSG00000251080",9.0,1.0,1.0,1.0,0.935,0.00294117647059]
["TCGA_LGG","TCGA-S9-A7IS-01A","4:RBPJ:26321048:+:4:SMIM20:25928313:+:rev","RBPJ--SMIM20","ENSG00000168214","ENSG00000250317",1.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_LGG","TCGA-S9-A7R3-01A","19:ZNF224:44101225:+:10:CASC2:118206522:+:fusion","ZNF224--CASC2","ENSG00000267680","ENSG00000177640",5.0,1.0,1.0,1.0,0.261,0.0390243902439]
["TCGA_LGG","TCGA-TM-A7CF-01A","19:C19orf53:13774707:+:19:CARM1:10904951:+:rev","C19orf53--CARM1","ENSG00000104979","ENSG00000142453",3.0,1.0,1.0,1.0,0.695,0.0324074074074]
["TCGA_LGG","TCGA-TM-A7CF-01A","6:HIVEP2:142836935:-:6:SLC22A3:160436780:+:strandcross","HIVEP2--SLC22A3","ENSG00000010818","ENSG00000146477",1.0,1.0,1.0,1.0,0.741,0.0277777777778]
["TCGA_LGG","TCGA-TM-A84B-01A","12:AC025165.3:57773128:+:12:GLI1:57463665:+:rev","AC025165.3--GLI1","ENSG00000123427","ENSG00000111087",86.0,1.0,1.0,1.0,0.814237358398429,"NA"]
["TCGA_LGG","TCGA-TM-A84G-01A","12:ARL1:101396399:-:12:AC068888.1:53014943:-:reg","ARL1--AC068888.1","ENSG00000120805","ENSG00000257337",22.0,1.0,1.0,1.0,0.845641036998292,0.00796812749004]
["TCGA_LGG","TCGA-TM-A84I-01A","12:AC069208.1:24562333:-:11:DLG2:83472777:-:fusion","AC069208.1--DLG2","ENSG00000255864","ENSG00000150672",10.0,1.0,1.0,1.0,0.952,0.0104529616725]
["TCGA_LGG","TCGA-TM-A84I-01A","12:TSPAN9:3083719:+:12:AC023796.1:24763861:+:reg","TSPAN9--AC023796.1","ENSG00000011105","ENSG00000255745",2.0,1.0,1.0,1.0,0.791,0.0278745644599]
["TCGA_LGG","TCGA-TM-A84I-01A","16:C16orf72:9103259:+:12:CTDSP2:57829596:-:fusion","C16orf72--CTDSP2","ENSG00000182831","ENSG00000175215",4.0,1.0,1.0,1.0,0.341,0.0487804878049]
["TCGA_LGG","TCGA-TM-A84J-01A","22:TOM1:35323177:+:22:IGLV2-8:22822982:+:rev","TOM1--IGLV2-8","ENSG00000100284","ENSG00000278196",23.0,1.0,1.0,1.0,0.56321859519177,0.0568720379147]
["TCGA_LGG","TCGA-VW-A7QS-01A","10:AS3MT:102878991:+:10:BORCS7:102860332:+:rev","AS3MT--BORCS7","ENSG00000270316","ENSG00000166275",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_LIHC","TCGA-2Y-A9GY-01A","17:CSNK1D:82265686:-:17:AC132938.1:82381342:-:rev","CSNK1D--AC132938.1","ENSG00000141551","ENSG00000260011",7.0,2.0,2.0,2.0,0.698,"NA"]
["TCGA_LIHC","TCGA-2Y-A9H0-01A","17:PEMT:17576920:-:12:AC079313.1:54466841:+:fusion","PEMT--AC079313.1","ENSG00000133027","ENSG00000258086",3.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_LIHC","TCGA-4R-AA8I-01A","18:AC008109.1:1566524:+:18:AP005230.1:2239879:-:strandcross","AC008109.1--AP005230.1","ENSG00000266602","ENSG00000263745",4.0,1.0,1.0,1.0,0.185,0.0416666666667]
["TCGA_LIHC","TCGA-BC-A10R-01A","19:ATF5:49929400:+:19:PTOV1:49859986:+:rev","ATF5--PTOV1","ENSG00000169136","ENSG00000104960",1.0,1.0,1.0,1.0,0.844,"NA"]
["TCGA_LIHC","TCGA-BC-A10R-01A","1:LPGAT1:211829059:-:1:NSL1:212739601:-:rev","LPGAT1--NSL1","ENSG00000123684","ENSG00000117697",2.0,1.0,1.0,1.0,0.692,"NA"]
["TCGA_LIHC","TCGA-BC-A10T-01A","17:PITPNA:1553004:-:19:AC020911.2:16292970:-:fusion","PITPNA--AC020911.2","ENSG00000174238","ENSG00000267275",2.0,1.0,1.0,1.0,0.937,0.0]
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["TCGA_LIHC","TCGA-BC-A10X-01A","2:SPP2:234051095:+:2:MROH2A:233828630:+:rev","SPP2--MROH2A","ENSG00000072080","ENSG00000185038",2.0,1.0,2.0,1.0,0.939,"NA"]
["TCGA_LIHC","TCGA-BC-A10Y-01A","7:SNX8:2314328:-:10:BX547991.1:47590319:-:fusion","SNX8--BX547991.1","ENSG00000106266","ENSG00000264404",5.0,1.0,1.0,1.0,0.506,0.00732600732601]
["TCGA_LIHC","TCGA-BC-A10Z-01A","9:CNTLN:17143376:+:9:AL162725.2:17112273:+:rev","CNTLN--AL162725.2","ENSG00000044459","ENSG00000237153",6.0,1.0,1.0,1.0,0.559,"NA"]
["TCGA_LIHC","TCGA-BC-A217-01A","12:DDIT3:57517706:-:12:AC022509.1:26231985:-:reg","DDIT3--AC022509.1","ENSG00000175197","ENSG00000255750",2.0,1.0,1.0,1.0,0.807,0.00175131348511]
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["TCGA_LIHC","TCGA-BW-A5NO-01A","22:SFI1:31589577:+:22:Z93930.2:28821972:+:rev","SFI1--Z93930.2","ENSG00000198089","ENSG00000226471",7.0,1.0,1.0,1.0,0.962,0.0]
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["TCGA_LIHC","TCGA-CC-A1HT-01A","17:EIF4A1:7575258:+:17:SENP3:7570356:+:rev","EIF4A1--SENP3","ENSG00000277957","ENSG00000161956",1.0,2.0,2.0,2.0,0.882,"NA"]
["TCGA_LIHC","TCGA-CC-A7IJ-01A","10:KAT6B:74825674:+:10:AC022400.1:73814429:+:rev","KAT6B--AC022400.1","ENSG00000156650","ENSG00000224195",7.0,1.0,1.0,1.0,0.751,0.00222222222222]
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["TCGA_LIHC","TCGA-CC-A8HU-01A","17:TMEM104:74795632:+:17:AC064805.1:74603850:+:rev","TMEM104--AC064805.1","ENSG00000109066","ENSG00000261222",6.0,1.0,1.0,1.0,0.787,"NA"]
["TCGA_LIHC","TCGA-CC-A9FV-01A","22:PICK1:38059345:+:19:KANK2:11178720:-:fusion","PICK1--KANK2","ENSG00000100151","ENSG00000197256",1.0,1.0,1.0,1.0,0.936,0.0]
["TCGA_LIHC","TCGA-DD-A115-01A","19:C3:6719211:-:16:AC092143.4:89910591:+:fusion","C3--AC092143.4","ENSG00000125730","ENSG00000141002",2.0,1.0,1.0,1.0,0.819,0.00636942675159]
["TCGA_LIHC","TCGA-DD-A115-01A","1:PRUNE1:151018669:+:3:SEMA3B-AS1:50266887:-:fusion","PRUNE1--SEMA3B-AS1","ENSG00000143363","ENSG00000232352",38.0,2.0,2.0,2.0,0.630822320654583,0.00636942675159]
["TCGA_LIHC","TCGA-DD-A11C-01A","12:OASL:121038774:-:12:TMTC2:82965024:+:strandcross","OASL--TMTC2","ENSG00000135114","ENSG00000179104",3.0,1.0,1.0,1.0,0.494,0.0140845070423]
["TCGA_LIHC","TCGA-DD-A1EG-01A","2:KYNU:142885536:+:1:AL591178.1:24086750:+:fusion","KYNU--AL591178.1","ENSG00000115919","ENSG00000225315",8.0,1.0,1.0,1.0,0.208,0.0220264317181]
["TCGA_LIHC","TCGA-DD-A1EK-01A","19:SIPA1L3:37907358:+:5:C1QTNF3-AMACR:34035758:-:fusion","SIPA1L3--C1QTNF3-AMACR","ENSG00000105738","ENSG00000273294",4.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_LIHC","TCGA-DD-A39W-01A","10:GPAM:112155864:-:5:C1QTNF3-AMACR:34005899:-:fusion","GPAM--C1QTNF3-AMACR","ENSG00000119927","ENSG00000242110",2.0,1.0,1.0,1.0,0.946,0.00346020761246]
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["TCGA_LIHC","TCGA-DD-A4NB-01A","1:SZT2:43426151:+:1:TIE1:43308986:+:rev","SZT2--TIE1","ENSG00000198198","ENSG00000066056",1.0,1.0,1.0,1.0,0.946,"NA"]
["TCGA_LIHC","TCGA-DD-A73G-01A","4:SMIM14:39638739:-:4:ALB:73421092:+:strandcross","SMIM14--ALB","ENSG00000163683","ENSG00000163631",17.0,1.0,1.0,1.0,0.266831038439176,0.0074812967581]
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["TCGA_LIHC","TCGA-DD-AADF-01A","12:EEA1:92891629:-:12:AC138123.2:93004598:-:rev","EEA1--AC138123.2","ENSG00000102189","ENSG00000257322",6.0,3.0,3.0,3.0,0.999,"NA"]
["TCGA_LIHC","TCGA-DD-AADO-01A","14:FOXN3:89619028:-:14:EFCAB11:89797324:-:rev","FOXN3--EFCAB11","ENSG00000053254","ENSG00000140025",2.0,2.0,1.0,1.0,0.54,"NA"]
["TCGA_LIHC","TCGA-DD-AAE2-01A","20:NCOA6:34825472:-:20:EDEM2:35142478:-:rev","NCOA6--EDEM2","ENSG00000198646","ENSG00000088298",2.0,1.0,1.0,1.0,0.83,"NA"]
["TCGA_LIHC","TCGA-DD-AAEH-01A","7:UBE3C:157231327:+:7:MNX1-AS2:157006877:+:rev","UBE3C--MNX1-AS2","ENSG00000009335","ENSG00000235029",1.0,1.0,1.0,1.0,0.892,"NA"]
["TCGA_LIHC","TCGA-DD-AAW1-01A","10:CYP2E1:133528640:+:10:MTG1:133395713:+:rev","CYP2E1--MTG1","ENSG00000130649","ENSG00000254536",2.0,2.0,2.0,2.0,0.782,"NA"]
["TCGA_LIHC","TCGA-ED-A459-01A","11:HPX:6440165:-:11:RPS25:119017545:-:rev","HPX--RPS25","ENSG00000110169","ENSG00000118181",2.0,1.0,1.0,1.0,0.983,0.0]
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["TCGA_LIHC","TCGA-EP-A26S-01A","22:CHEK2:28741769:-:22:XBP1:28797205:-:rev","CHEK2--XBP1","ENSG00000183765","ENSG00000100219",2.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_LIHC","TCGA-EP-A2KA-01A","X:SLC9A7:46758705:-:X:AC115618.1:48568180:-:rev","SLC9A7--AC115618.1","ENSG00000065923","ENSG00000204620",11.0,1.0,1.0,1.0,0.62,0.0019801980198]
["TCGA_LIHC","TCGA-ES-A2HS-01A","10:CYP2E1:133527572:+:21:FTCD:46138923:-:fusion","CYP2E1--FTCD","ENSG00000130649","ENSG00000160282",3.0,1.0,1.0,1.0,0.779,0.0]
["TCGA_LIHC","TCGA-ES-A2HT-01A","6:APOM:31657298:+:1:APOA2:161223425:-:fusion","APOM--APOA2","ENSG00000204444","ENSG00000158874",2.0,1.0,1.0,1.0,0.501,0.00862068965517]
["TCGA_LIHC","TCGA-FV-A496-01A","16:TXNDC11:11721577:-:16:NPIPB2:11937668:-:rev","TXNDC11--NPIPB2","ENSG00000153066","ENSG00000234719",1.0,1.0,1.0,1.0,0.865,"NA"]
["TCGA_LIHC","TCGA-G3-A5SM-01A","19:NFIC:3359685:+:19:GNA11:3110149:+:rev","NFIC--GNA11","ENSG00000141905","ENSG00000088256",2.0,3.0,3.0,2.0,0.895,"NA"]
["TCGA_LIHC","TCGA-G3-A7M7-01A","11:CRY2:45856090:+:11:AC044839.1:45739410:+:rev","CRY2--AC044839.1","ENSG00000121671","ENSG00000254519",18.0,1.0,1.0,1.0,0.782988180847052,"NA"]
["TCGA_LIHC","TCGA-GJ-A9DB-01A","16:ABAT:8674711:+:16:CARHSP1:8859335:-:strandcross","ABAT--CARHSP1","ENSG00000183044","ENSG00000153048",2.0,2.0,1.0,1.0,0.948,0.0]
["TCGA_LIHC","TCGA-HP-A5N0-01A","1:TXNIP:145994281:-:18:AP005530.1:13152:+:fusion","TXNIP--AP005530.1","ENSG00000265972","ENSG00000262352",9.0,1.0,1.0,1.0,0.623,0.00591715976331]
["TCGA_LIHC","TCGA-K7-AAU7-01A","12:KIAA1551:31970356:+:12:AC022509.1:26231985:-:strandcross","KIAA1551--AC022509.1","ENSG00000174718","ENSG00000255750",6.0,1.0,1.0,1.0,0.728,0.00684931506849]
["TCGA_LIHC","TCGA-KR-A7K8-01A","3:BDH1:197546361:-:8:AC064807.2:52022416:+:fusion","BDH1--AC064807.2","ENSG00000161267","ENSG00000253844",216.0,1.0,1.0,1.0,0.997500919477457,0.0]
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["TCGA_LIHC","TCGA-NI-A8LF-01A","15:AKAP13:85380798:+:15:PDE8A:85064370:+:rev","AKAP13--PDE8A","ENSG00000170776","ENSG00000073417",4.0,2.0,3.0,1.0,0.927,"NA"]
["TCGA_LIHC","TCGA-RC-A6M3-01A","15:UBR1:43043215:-:15:AC023300.2:74311958:-:rev","UBR1--AC023300.2","ENSG00000159459","ENSG00000277749",6.0,1.0,1.0,1.0,0.709,0.00787401574803]
["TCGA_LIHC","TCGA-T1-A6J8-01A","12:ATP5B:56643403:-:4:ALB:73408594:+:fusion","ATP5B--ALB","ENSG00000110955","ENSG00000163631",2.0,1.0,1.0,1.0,0.969,0.0027027027027]
["TCGA_LIHC","TCGA-UB-A7MA-01A","19:PEPD:33462995:-:19:ZNF208:21974807:-:reg","PEPD--ZNF208","ENSG00000124299","ENSG00000160321",11.0,1.0,1.0,1.0,0.653,0.00355871886121]
["TCGA_LIHC","TCGA-XR-A8TD-01A","19:NAPA:47514843:-:1:LINC00862:200343410:-:fusion","NAPA--LINC00862","ENSG00000105402","ENSG00000203721",2.0,1.0,1.0,1.0,0.756,0.0177304964539]
["TCGA_LIHC","TCGA-XR-A8TG-01A","20:PTPN1:50510590:+:20:LINC01270:50298156:+:rev","PTPN1--LINC01270","ENSG00000196396","ENSG00000203999",13.0,2.0,1.0,1.0,0.6,"NA"]
["TCGA_LIHC","TCGA-ZP-A9D0-01A","7:PDIA4:149008159:-:8:LINC01605:37421569:-:fusion","PDIA4--LINC01605","ENSG00000155660","ENSG00000253161",4.0,1.0,1.0,1.0,0.925,0.0026455026455]
["TCGA_LIHC","TCGA-ZP-A9D0-01A","7:PDIA4:149008159:-:8:LINC01605:37431787:-:fusion","PDIA4--LINC01605","ENSG00000155660","ENSG00000253161",11.0,1.0,1.0,1.0,0.91,0.0026455026455]
["TCGA_LIHC","TCGA-ZS-A9CF-01A","3:PAQR9-AS1:142964636:+:3:AC021074.3:142933205:+:rev","PAQR9-AS1--AC021074.3","ENSG00000241570","ENSG00000243818",9.0,2.0,2.0,2.0,0.795,"NA"]
["TCGA_LUAD","TCGA-05-4250-01A","12:DENND5B:31590706:-:12:AC022081.1:28822273:-:reg","DENND5B--AC022081.1","ENSG00000170456","ENSG00000256513",3.0,1.0,1.0,1.0,0.867,0.0]
["TCGA_LUAD","TCGA-05-4395-01A","17:BPTF:67826337:+:17:AC011990.1:70333590:-:strandcross","BPTF--AC011990.1","ENSG00000171634","ENSG00000267109",36.0,1.0,1.0,1.0,0.930863045636632,0.00329489291598]
["TCGA_LUAD","TCGA-05-4398-01A","15:AC091167.7:90295226:+:15:SEMA4B:90217439:+:rev","AC091167.7--SEMA4B","ENSG00000275674","ENSG00000185033",1.0,1.0,1.0,1.0,0.811,"NA"]
["TCGA_LUAD","TCGA-05-4402-01A","8:TRIQK:92891989:-:8:AC100801.1:85885935:+:strandcross","TRIQK--AC100801.1","ENSG00000205133","ENSG00000253154",15.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_LUAD","TCGA-05-4418-01A","6:SENP6:75623960:+:6:AL589740.1:98398471:+:reg","SENP6--AL589740.1","ENSG00000112701","ENSG00000271860",15.0,1.0,1.0,1.0,0.275,0.0138888888889]
["TCGA_LUAD","TCGA-05-4420-01A","4:CCSER1:90127831:+:4:MMRN1:89927795:+:rev","CCSER1--MMRN1","ENSG00000184305","ENSG00000138722",2.0,2.0,2.0,2.0,0.481,"NA"]
["TCGA_LUAD","TCGA-05-4427-01A","12:CTDSP2:57846372:-:12:AC084033.3:57935553:-:rev","CTDSP2--AC084033.3","ENSG00000175215","ENSG00000257698",17.0,5.0,7.0,5.0,0.666583329881773,"NA"]
["TCGA_LUAD","TCGA-05-4432-01A","1:NBPF14:148679462:-:1:AL138930.1:160570939:+:strandcross","NBPF14--AL138930.1","ENSG00000270629","ENSG00000234425",4.0,1.0,1.0,1.0,0.362,0.0136752136752]
["TCGA_LUAD","TCGA-05-5425-01A","19:NECTIN2:44865660:+:12:AC024145.1:26419408:+:fusion","NECTIN2--AC024145.1","ENSG00000130202","ENSG00000255968",5.0,1.0,1.0,1.0,0.989,0.00243902439024]
["TCGA_LUAD","TCGA-38-4628-01A","16:ANKRD11:89418284:-:20:AHCY:34295585:-:fusion","ANKRD11--AHCY","ENSG00000167522","ENSG00000101444",2.0,1.0,1.0,1.0,0.303,0.00487804878049]
["TCGA_LUAD","TCGA-38-4630-01A","1:SPEN:15876678:+:17:AC243773.2:36907539:-:fusion","SPEN--AC243773.2","ENSG00000065526","ENSG00000277268",12.0,1.0,1.0,1.0,0.511,0.0137614678899]
["TCGA_LUAD","TCGA-38-4630-01A","10:WBP1L:102744143:+:10:SUFU:102592582:+:rev","WBP1L--SUFU","ENSG00000166272","ENSG00000107882",10.0,3.0,4.0,3.0,0.521,"NA"]
["TCGA_LUAD","TCGA-38-4630-01A","10:WBP1L:102776417:+:10:SUFU:102592582:+:rev","WBP1L--SUFU","ENSG00000166272","ENSG00000107882",14.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_LUAD","TCGA-38-4630-01A","15:SEMA4B:90185081:+:15:AC092769.1:90133397:+:rev","SEMA4B--AC092769.1","ENSG00000185033","ENSG00000259685",2.0,2.0,2.0,2.0,0.99,"NA"]
["TCGA_LUAD","TCGA-38-4630-01A","3:TNFSF10:172514861:-:3:LINC02068:172594581:-:rev","TNFSF10--LINC02068","ENSG00000121858","ENSG00000223387",2.0,1.0,1.0,1.0,0.773,"NA"]
["TCGA_LUAD","TCGA-38-4632-01A","19:AC245748.2:44442563:-:21:AP000695.2:36460290:+:fusion","AC245748.2--AP000695.2","ENSG00000267188","ENSG00000233818",3.0,1.0,1.0,1.0,0.773,0.0108108108108]
["TCGA_LUAD","TCGA-38-6178-01A","9:MEGF9:120713758:-:8:ZFPM2-AS1:105927717:-:fusion","MEGF9--ZFPM2-AS1","ENSG00000106780","ENSG00000251003",2.0,1.0,1.0,1.0,0.157,0.0364372469636]
["TCGA_LUAD","TCGA-44-2656-01A","17:AC060766.7:35409465:-:17:SLFN12:35420381:-:rev","AC060766.7--SLFN12","ENSG00000267745","ENSG00000172123",3.0,2.0,2.0,1.0,0.526,"NA"]
["TCGA_LUAD","TCGA-44-2662-01A","5:RHOBTB3:95783963:+:5:RFESD:95684595:+:rev","RHOBTB3--RFESD","ENSG00000164292","ENSG00000175449",11.0,3.0,2.0,2.0,0.949,"NA"]
["TCGA_LUAD","TCGA-44-2665-01A","14:MED6:70592880:-:14:AL357153.3:70633858:-:rev","MED6--AL357153.3","ENSG00000133997","ENSG00000259115",2.0,1.0,1.0,1.0,0.643,"NA"]
["TCGA_LUAD","TCGA-44-2668-01A","20:TOP1:41061490:+:20:AL034550.1:32453338:+:rev","TOP1--AL034550.1","ENSG00000198900","ENSG00000236772",5.0,2.0,2.0,2.0,0.945,0.00138888888889]
["TCGA_LUAD","TCGA-44-3917-01A","15:TTC23:99241365:-:15:LRRC28:99287257:+:strandcross","TTC23--LRRC28","ENSG00000103852","ENSG00000168904",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_LUAD","TCGA-44-3918-01A","19:ZNF100:21765694:-:19:AC008555.5:34850794:-:rev","ZNF100--AC008555.5","ENSG00000197020","ENSG00000271109",22.0,3.0,2.0,2.0,0.825190177842566,0.00427960057061]
["TCGA_LUAD","TCGA-44-3918-01A","4:SRP72:56469773:+:4:PAICS:56459372:+:rev","SRP72--PAICS","ENSG00000174780","ENSG00000128050",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_LUAD","TCGA-44-4112-01A","10:NT5C2:103105706:-:10:PCGF6:103314272:-:rev","NT5C2--PCGF6","ENSG00000076685","ENSG00000156374",1.0,1.0,1.0,1.0,0.818,"NA"]
["TCGA_LUAD","TCGA-44-4112-01A","12:XPOT:64410095:+:12:TMEM5:63802091:+:rev","XPOT--TMEM5","ENSG00000184575","ENSG00000118600",3.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_LUAD","TCGA-44-4112-01A","3:OPA1:193615041:+:3:ATP13A4-AS1:193554770:+:rev","OPA1--ATP13A4-AS1","ENSG00000198836","ENSG00000225473",8.0,1.0,1.0,1.0,0.804,"NA"]
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["TCGA_LUAD","TCGA-97-A4LX-01A","20:STK35:2103365:+:20:SNAP25-AS1:10076913:-:strandcross","STK35--SNAP25-AS1","ENSG00000125834","ENSG00000227906",13.0,1.0,1.0,1.0,0.857,0.00571428571429]
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["TCGA_LUAD","TCGA-MN-A4N1-01A","11:INTS4:77938651:-:11:AP002370.2:83692021:+:strandcross","INTS4--AP002370.2","ENSG00000149262","ENSG00000255311",7.0,1.0,1.0,1.0,0.426,0.00975609756098]
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["TCGA_LUAD","TCGA-NJ-A4YP-01A","6:RPL10A:35468439:+:2:AUP1:74528006:-:fusion","RPL10A--AUP1","ENSG00000198755","ENSG00000115307",3.0,1.0,1.0,1.0,0.218,0.0116199589884]
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["TCGA_LUAD","TCGA-O1-A52J-01A","13:ATP11A:112785257:+:13:ARHGEF7:111273814:+:rev","ATP11A--ARHGEF7","ENSG00000068650","ENSG00000102606",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_LUSC","TCGA-18-3415-01A","16:MYH11:15856941:-:21:AP000688.1:36098259:-:fusion","MYH11--AP000688.1","ENSG00000133392","ENSG00000230212",32.0,1.0,1.0,1.0,0.927315923192831,0.005]
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["TCGA_LUSC","TCGA-18-4083-01A","19:CARM1:10871922:+:19:DNM2:10805916:+:rev","CARM1--DNM2","ENSG00000142453","ENSG00000079805",1.0,1.0,1.0,1.0,0.935,"NA"]
["TCGA_LUSC","TCGA-18-5592-01A","15:LINS1:100602121:-:12:KRT5:52520308:-:fusion","LINS1--KRT5","ENSG00000140471","ENSG00000186081",12.0,1.0,1.0,1.0,0.701,0.00518134715026]
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["TCGA_LUSC","TCGA-21-1079-01A","9:MVB12B:126395697:+:13:AL354809.1:39191603:+:fusion","MVB12B--AL354809.1","ENSG00000196814","ENSG00000273507",3.0,1.0,1.0,1.0,0.927,0.0028328611898]
["TCGA_LUSC","TCGA-21-1082-01A","2:CASP8:201234112:+:2:AC017104.3:231453084:+:reg","CASP8--AC017104.3","ENSG00000064012","ENSG00000233538",17.0,1.0,1.0,1.0,0.445662159765684,0.0100200400802]
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["TCGA_LUSC","TCGA-22-0944-01A","2:IGKV1D-8:90221384:+:2:IGKJ4:88860922:-:strandcross","IGKV1D-8--IGKJ4","ENSG00000239819","ENSG00000211594",4.0,1.0,1.0,1.0,0.283,0.0542495479204]
["TCGA_LUSC","TCGA-22-1016-01A","12:WNK1:754324:+:1:AL603840.1:55614921:+:fusion","WNK1--AL603840.1","ENSG00000060237","ENSG00000234810",30.0,1.0,1.0,1.0,0.925023344040928,0.00540540540541]
["TCGA_LUSC","TCGA-22-4593-01A","14:ITPK1:93115069:-:14:CEP170B:104876256:+:strandcross","ITPK1--CEP170B","ENSG00000100605","ENSG00000099814",2.0,1.0,1.0,1.0,0.196,0.012278308322]
["TCGA_LUSC","TCGA-22-4604-01A","3:ZNF654:88059505:+:18:RALBP1:9516845:+:fusion","ZNF654--RALBP1","ENSG00000175105","ENSG00000017797",1.0,1.0,1.0,1.0,0.845,0.00408719346049]
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["TCGA_LUSC","TCGA-22-5478-01A","18:LDLRAD4:13387762:+:18:CEP192:13087017:+:rev","LDLRAD4--CEP192","ENSG00000168675","ENSG00000101639",2.0,2.0,2.0,2.0,0.95,"NA"]
["TCGA_LUSC","TCGA-22-5482-01A","9:RPL12:127449281:-:8:PPP2R2A:26354468:+:fusion","RPL12--PPP2R2A","ENSG00000197958","ENSG00000221914",2.0,1.0,1.0,1.0,0.935,0.00173010380623]
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["TCGA_LUSC","TCGA-22-A5C4-01A","2:MAP3K20:173091190:+:2:GORASP2:170948350:+:rev","MAP3K20--GORASP2","ENSG00000091436","ENSG00000115806",3.0,2.0,1.0,1.0,0.955,0.0]
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["TCGA_LUSC","TCGA-34-5239-01A","20:PTPRA:2965202:+:20:STK35:2116666:+:rev","PTPRA--STK35","ENSG00000132670","ENSG00000125834",2.0,1.0,1.0,1.0,0.891,"NA"]
["TCGA_LUSC","TCGA-34-5241-01A","3:CELSR3:48656698:-:3:RHOA:49375591:-:rev","CELSR3--RHOA","ENSG00000008300","ENSG00000067560",2.0,1.0,1.0,1.0,0.658,"NA"]
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["TCGA_LUSC","TCGA-37-3789-01A","11:TMEM135:87157406:+:11:EED:86250296:+:rev","TMEM135--EED","ENSG00000166575","ENSG00000074266",2.0,2.0,1.0,1.0,0.986,"NA"]
["TCGA_LUSC","TCGA-37-4135-01A","10:NET1:5429229:+:10:AKR1C3:5107461:+:rev","NET1--AKR1C3","ENSG00000173848","ENSG00000196139",2.0,1.0,1.0,1.0,0.877,"NA"]
["TCGA_LUSC","TCGA-37-4141-01A","18:SNHG22:49814062:+:20:SNRPB:2462761:-:fusion","SNHG22--SNRPB","ENSG00000267322","ENSG00000125835",1.0,1.0,1.0,1.0,0.958,0.0]
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["TCGA_LUSC","TCGA-39-5019-01A","9:KDM4C:6893232:+:9:UHRF2:6420912:+:rev","KDM4C--UHRF2","ENSG00000107077","ENSG00000147854",2.0,3.0,3.0,2.0,0.849,"NA"]
["TCGA_LUSC","TCGA-39-5028-01A","2:PSME4:53919151:-:2:LINC01122:59003949:+:strandcross","PSME4--LINC01122","ENSG00000068878","ENSG00000233723",59.0,1.0,1.0,1.0,0.92240752614962,0.00176991150442]
["TCGA_LUSC","TCGA-39-5035-01A","11:LAMTOR1:72098289:-:11:AP000812.1:72163379:-:rev","LAMTOR1--AP000812.1","ENSG00000149357","ENSG00000204971",16.0,1.0,1.0,1.0,0.90159953871115,"NA"]
["TCGA_LUSC","TCGA-43-2576-01A","11:USP47:11884580:+:11:AC104031.1:11573525:+:rev","USP47--AC104031.1","ENSG00000170242","ENSG00000255462",4.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_LUSC","TCGA-43-2581-01A","22:BCR:23182239:+:22:MIATNB:26717253:+:reg","BCR--MIATNB","ENSG00000186716","ENSG00000244625",3.0,1.0,1.0,1.0,0.922,0.00245098039216]
["TCGA_LUSC","TCGA-43-3920-01A","11:EIF3M:32596047:+:11:AL136088.1:30630059:+:rev","EIF3M--AL136088.1","ENSG00000149100","ENSG00000254489",3.0,1.0,1.0,1.0,0.585,0.0138504155125]
["TCGA_LUSC","TCGA-43-6143-01A","6:AL513188.1:20756652:-:6:CDKAL1:21230848:+:strandcross","AL513188.1--CDKAL1","ENSG00000233848","ENSG00000145996",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_LUSC","TCGA-43-6770-01A","10:PTEN:87933251:+:4:AC093772.1:127401760:-:fusion","PTEN--AC093772.1","ENSG00000171862","ENSG00000248491",4.0,1.0,1.0,1.0,0.446,0.00892857142857]
["TCGA_LUSC","TCGA-43-6771-01A","11:RBM14:66625678:+:11:AP003071.2:69147740:-:strandcross","RBM14--AP003071.2","ENSG00000239306","ENSG00000261070",5.0,1.0,1.0,1.0,0.767,0.00249066002491]
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["TCGA_LUSC","TCGA-43-8115-01A","11:NAP1L4:2951259:-:1:AC104461.1:200473909:+:fusion","NAP1L4--AC104461.1","ENSG00000205531","ENSG00000230623",7.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_LUSC","TCGA-43-8116-01A","8:PVT1:127796071:+:8:TRIB1:125436006:+:rev","PVT1--TRIB1","ENSG00000249859","ENSG00000173334",35.0,1.0,1.0,1.0,0.761541972699844,0.00686498855835]
["TCGA_LUSC","TCGA-46-3765-01A","3:IGF2BP2:185823153:-:3:EIF1B-AS1:40174722:-:reg","IGF2BP2--EIF1B-AS1","ENSG00000073792","ENSG00000280739",4.0,1.0,1.0,1.0,0.682,0.00675675675676]
["TCGA_LUSC","TCGA-46-3769-01A","4:RAPGEF2:159210583:+:4:FNIP2:158851321:+:rev","RAPGEF2--FNIP2","ENSG00000109756","ENSG00000052795",2.0,1.0,1.0,1.0,0.907,"NA"]
["TCGA_LUSC","TCGA-51-4079-01A","4:RPL9:39456406:-:4:SMIM14:39605180:-:rev","RPL9--SMIM14","ENSG00000163682","ENSG00000163683",2.0,2.0,1.0,1.0,0.988,"NA"]
["TCGA_LUSC","TCGA-51-6867-01A","6:TPD52L1:125153970:+:6:RNF217:124971478:+:rev","TPD52L1--RNF217","ENSG00000111907","ENSG00000146373",2.0,1.0,1.0,1.0,0.718,"NA"]
["TCGA_LUSC","TCGA-52-7810-01A","4:CCSER1:90127831:+:7:AC099342.1:20298282:+:fusion","CCSER1--AC099342.1","ENSG00000184305","ENSG00000226097",12.0,1.0,1.0,1.0,0.759,0.00986842105263]
["TCGA_LUSC","TCGA-56-5898-01A","12:AC134511.1:67069050:-:12:CNOT2:70337389:+:strandcross","AC134511.1--CNOT2","ENSG00000256248","ENSG00000111596",23.0,1.0,1.0,1.0,0.938606124320708,0.0]
["TCGA_LUSC","TCGA-56-5898-01A","3:TBL1XR1:177197121:-:3:KCNMB2-AS1:178526625:-:rev","TBL1XR1--KCNMB2-AS1","ENSG00000177565","ENSG00000237978",169.0,1.0,1.0,1.0,0.999879851029837,0.0]
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["TCGA_LUSC","TCGA-56-7223-01A","3:SENP5:196903610:+:3:AC024559.1:193996109:+:rev","SENP5--AC024559.1","ENSG00000119231","ENSG00000238043",6.0,1.0,1.0,1.0,0.992,0.00198412698413]
["TCGA_LUSC","TCGA-56-7580-01A","8:PVT1:127794734:+:8:AC083923.2:126713286:+:rev","PVT1--AC083923.2","ENSG00000249859","ENSG00000254286",18.0,2.0,1.0,1.0,0.876667030678772,0.0]
["TCGA_LUSC","TCGA-56-7730-01A","3:ATP11B:182793786:+:3:AC125613.1:181660163:-:strandcross","ATP11B--AC125613.1","ENSG00000058063","ENSG00000239381",3.0,1.0,1.0,1.0,0.472,0.00729927007299]
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["TCGA_LUSC","TCGA-56-8623-01A","2:SFTPB:85665289:-:3:RPL24:101682492:-:fusion","SFTPB--RPL24","ENSG00000168878","ENSG00000114391",2.0,1.0,1.0,1.0,0.982,0.0]
["TCGA_LUSC","TCGA-56-A4BX-01A","3:KCNMB2-AS1:178748404:-:3:LPP:188609161:+:strandcross","KCNMB2-AS1--LPP","ENSG00000237978","ENSG00000145012",4.0,1.0,1.0,1.0,0.97,0.0]
["TCGA_LUSC","TCGA-56-A4BX-01A","3:TBL1XR1:177131363:-:3:PEX5L-AS1:179880888:+:strandcross","TBL1XR1--PEX5L-AS1","ENSG00000177565","ENSG00000243799",15.0,1.0,1.0,1.0,0.78,0.00492610837438]
["TCGA_LUSC","TCGA-56-A4BX-01A","1:CACHD1:64550656:+:1:PGM1:63629425:+:rev","CACHD1--PGM1","ENSG00000158966","ENSG00000079739",2.0,1.0,1.0,1.0,0.952,"NA"]
["TCGA_LUSC","TCGA-56-A4ZK-01A","15:MTMR10:30947130:-:15:AC013652.1:39071608:-:rev","MTMR10--AC013652.1","ENSG00000166912","ENSG00000259345",4.0,1.0,1.0,1.0,0.778,0.00190476190476]
["TCGA_LUSC","TCGA-58-8386-01A","3:TBC1D23:100290701:+:3:CMSS1:100160430:+:rev","TBC1D23--CMSS1","ENSG00000036054","ENSG00000184220",6.0,1.0,1.0,1.0,0.882,"NA"]
["TCGA_LUSC","TCGA-58-A46L-01A","13:RCBTB1:49540876:-:13:KPNA3:49711022:-:rev","RCBTB1--KPNA3","ENSG00000136144","ENSG00000102753",2.0,1.0,1.0,1.0,0.809,"NA"]
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["TCGA_MESO","TCGA-SH-A9CT-01A","4:IRF2:184428978:-:6:Z84484.1:36391776:+:fusion","IRF2--Z84484.1","ENSG00000168310","ENSG00000224666",202.0,1.0,1.0,1.0,0.97782893212282,0.0]
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["TCGA_OV","TCGA-04-1347-01A","16:MAZ:29811128:+:22:MIF:23894450:+:fusion","MAZ--MIF","ENSG00000103495","ENSG00000240972",3.0,1.0,1.0,1.0,0.309,0.0018281535649]
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["TCGA_OV","TCGA-04-1350-01A","11:TMEM179B:62790110:+:16:RPS2:1962270:-:fusion","TMEM179B--RPS2","ENSG00000185475","ENSG00000140988",3.0,1.0,1.0,1.0,0.29,0.00911854103343]
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["TCGA_OV","TCGA-04-1362-01A","1:SKI:2229735:+:12:FAM222A-AS1:109735821:-:fusion","SKI--FAM222A-AS1","ENSG00000157933","ENSG00000255650",2.0,1.0,1.0,1.0,0.942,0.0]
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["TCGA_OV","TCGA-04-1517-01A","20:SOGA1:36839217:-:20:SAMHD1:36919519:-:rev","SOGA1--SAMHD1","ENSG00000149639","ENSG00000101347",17.0,1.0,1.0,1.0,0.789896904390233,"NA"]
["TCGA_OV","TCGA-04-1517-01A","8:RGS22:100080134:-:8:SNX31:100617730:-:rev","RGS22--SNX31","ENSG00000132554","ENSG00000174226",1.0,1.0,1.0,1.0,0.93,"NA"]
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["TCGA_OV","TCGA-09-1667-01C","1:PATJ:61775334:+:1:NFIA:61455303:+:rev","PATJ--NFIA","ENSG00000132849","ENSG00000162599",10.0,1.0,1.0,1.0,0.919,"NA"]
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["TCGA_OV","TCGA-09-2044-01B","15:PPIB:64156725:-:15:CSNK1G1:64166080:-:rev","PPIB--CSNK1G1","ENSG00000166794","ENSG00000169118",2.0,1.0,1.0,1.0,0.956,"NA"]
["TCGA_OV","TCGA-09-2044-01B","20:KIF3B:32327661:+:20:HM13:31577604:+:rev","KIF3B--HM13","ENSG00000101350","ENSG00000101294",2.0,1.0,1.0,1.0,0.766,"NA"]
["TCGA_OV","TCGA-09-2051-01A","14:G2E3:30559272:+:14:DHRS4-AS1:23941158:-:strandcross","G2E3--DHRS4-AS1","ENSG00000092140","ENSG00000215256",12.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_OV","TCGA-09-2056-01B","11:EIF4G2:10806820:-:X:RPS4X:72273389:-:fusion","EIF4G2--RPS4X","ENSG00000110321","ENSG00000198034",2.0,1.0,1.0,1.0,0.368,0.00437317784257]
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["TCGA_OV","TCGA-09-2056-01B","17:WIPF2:40220538:+:17:AC090844.2:39939338:+:rev","WIPF2--AC090844.2","ENSG00000171475","ENSG00000264968",2.0,1.0,1.0,1.0,0.92,"NA"]
["TCGA_OV","TCGA-10-0926-01A","1:NEGR1:72282319:-:1:AL583808.1:72749276:-:rev","NEGR1--AL583808.1","ENSG00000172260","ENSG00000225087",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_OV","TCGA-10-0928-01A","5:FBXW11:172006458:-:5:STK10:172156788:-:rev","FBXW11--STK10","ENSG00000072803","ENSG00000072786",1.0,1.0,2.0,1.0,0.946,"NA"]
["TCGA_OV","TCGA-10-0934-01A","19:RPL13A:49489922:+:19:PSMD8:38383253:+:rev","RPL13A--PSMD8","ENSG00000142541","ENSG00000099341",3.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_OV","TCGA-10-0934-01A","17:FAM222B:28766586:-:17:NUFIP2:29264591:-:rev","FAM222B--NUFIP2","ENSG00000173065","ENSG00000108256",5.0,1.0,1.0,1.0,0.794,"NA"]
["TCGA_OV","TCGA-10-0938-01A","11:C11orf24:68268054:-:11:CCDC90B:83280260:-:rev","C11orf24--CCDC90B","ENSG00000171067","ENSG00000137500",3.0,1.0,1.0,1.0,0.871,0.0]
["TCGA_OV","TCGA-13-0724-01A","19:TRMT1:13115279:-:19:AC020934.1:12832555:+:strandcross","TRMT1--AC020934.1","ENSG00000104907","ENSG00000267424",14.0,1.0,1.0,1.0,0.922,9.64320154291E-4]
["TCGA_OV","TCGA-13-0726-01A","9:RALGPS1:126977745:+:1:SPRR5:152948537:+:fusion","RALGPS1--SPRR5","ENSG00000136828","ENSG00000283227",6.0,1.0,1.0,1.0,0.584,0.0]
["TCGA_OV","TCGA-13-0730-01A","6:TRAM2:52535783:-:6:SUPT3H:44829857:-:reg","TRAM2--SUPT3H","ENSG00000065308","ENSG00000196284",19.0,1.0,1.0,1.0,0.592354906095001,0.0]
["TCGA_OV","TCGA-13-0762-01A","2:RAB1A:65104734:-:16:ANKRD11:89317075:-:fusion","RAB1A--ANKRD11","ENSG00000138069","ENSG00000167522",5.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_OV","TCGA-13-0765-01A","19:HNRNPUL1:41281275:+:19:ACTN4:38700600:+:rev","HNRNPUL1--ACTN4","ENSG00000105323","ENSG00000130402",2.0,1.0,1.0,1.0,0.377,0.00116009280742]
["TCGA_OV","TCGA-13-0766-01A","4:USP46:52659115:-:4:SCFD2:52920870:-:rev","USP46--SCFD2","ENSG00000109189","ENSG00000184178",3.0,3.0,4.0,1.0,0.592,"NA"]
["TCGA_OV","TCGA-13-0768-01A","11:FNBP4:47746056:-:11:NUP160:47780447:-:rev","FNBP4--NUP160","ENSG00000109920","ENSG00000030066",3.0,1.0,1.0,1.0,0.96,"NA"]
["TCGA_OV","TCGA-13-0797-01A","20:ZMYND8:47287229:-:22:ENTHD1:39862007:-:fusion","ZMYND8--ENTHD1","ENSG00000101040","ENSG00000176177",3.0,1.0,1.0,1.0,0.868,0.0]
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["TCGA_OV","TCGA-13-0799-01A","9:FANCC:95317526:-:9:PTCH1:95449940:-:rev","FANCC--PTCH1","ENSG00000158169","ENSG00000185920",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_OV","TCGA-13-0801-01A","1:ZNF678:227582606:+:2:LINC00276:13841614:-:fusion","ZNF678--LINC00276","ENSG00000181450","ENSG00000230448",160.0,1.0,1.0,1.0,0.979155324157602,0.0]
["TCGA_OV","TCGA-13-0801-01A","18:NFATC1:79467582:+:18:ATP9B:79303604:+:rev","NFATC1--ATP9B","ENSG00000131196","ENSG00000166377",3.0,1.0,1.0,1.0,0.454,"NA"]
["TCGA_OV","TCGA-13-0884-01B","7:AMPH:38631283:-:7:AC004540.2:26372568:-:reg","AMPH--AC004540.2","ENSG00000078053","ENSG00000225792",2.0,1.0,1.0,1.0,0.878,0.0]
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["TCGA_OV","TCGA-13-0890-01A","5:PJA2:109409842:-:5:FER:108883396:+:strandcross","PJA2--FER","ENSG00000198961","ENSG00000151422",5.0,1.0,1.0,1.0,0.82,0.00390625]
["TCGA_OV","TCGA-13-0890-01A","1:FOXJ3:42335059:-:1:AL512353.1:42843450:-:rev","FOXJ3--AL512353.1","ENSG00000198815","ENSG00000228192",19.0,1.0,1.0,1.0,0.714423722590041,"NA"]
["TCGA_OV","TCGA-13-0893-01B","9:MEGF9:120713758:-:9:PLPPR1:101185450:+:strandcross","MEGF9--PLPPR1","ENSG00000106780","ENSG00000148123",4.0,1.0,1.0,1.0,0.875,0.00125]
["TCGA_OV","TCGA-13-0893-01B","2:ZNF142:218648635:-:2:PRKAG3:218823076:-:rev","ZNF142--PRKAG3","ENSG00000115568","ENSG00000115592",3.0,1.0,1.0,1.0,0.931,"NA"]
["TCGA_OV","TCGA-13-0897-01A","4:RBM47:40630463:-:2:NRXN1:50623615:-:fusion","RBM47--NRXN1","ENSG00000163694","ENSG00000179915",4.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_OV","TCGA-13-0897-01A","1:FALEC:150516062:+:1:TARS2:150504335:+:rev","FALEC--TARS2","ENSG00000228126","ENSG00000143374",2.0,1.0,1.0,1.0,0.532,"NA"]
["TCGA_OV","TCGA-13-0897-01A","1:S100A13:153626320:-:1:ILF2:153665336:-:rev","S100A13--ILF2","ENSG00000189171","ENSG00000143621",3.0,1.0,1.0,1.0,0.933,"NA"]
["TCGA_OV","TCGA-13-0900-01B","15:PARP16:65259464:-:12:BICD1:32377540:+:fusion","PARP16--BICD1","ENSG00000138617","ENSG00000151746",3.0,1.0,1.0,1.0,0.98,0.0]
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["TCGA_OV","TCGA-13-0911-01A","10:ZFYVE27:97738674:+:10:SLIT1-AS1:97103586:+:rev","ZFYVE27--SLIT1-AS1","ENSG00000155256","ENSG00000234855",6.0,1.0,1.0,1.0,0.658,"NA"]
["TCGA_OV","TCGA-13-0913-01A","11:TTC9C:62735564:+:11:TUT1:62581701:-:strandcross","TTC9C--TUT1","ENSG00000162222","ENSG00000255508",2.0,1.0,1.0,1.0,0.616,0.00177304964539]
["TCGA_OV","TCGA-13-0913-01A","6:TMEM181:158589782:+:6:GTF2H5:158191977:+:rev","TMEM181--GTF2H5","ENSG00000146433","ENSG00000272047",1.0,1.0,2.0,1.0,0.95,"NA"]
["TCGA_OV","TCGA-13-0919-01A","3:RBM6:49962685:+:9:NUP214:131215212:+:fusion","RBM6--NUP214","ENSG00000004534","ENSG00000126883",3.0,1.0,1.0,1.0,0.694,0.0]
["TCGA_OV","TCGA-13-0920-01A","12:PRICKLE1:42589465:-:12:LINC02373:69459517:+:strandcross","PRICKLE1--LINC02373","ENSG00000139174","ENSG00000257507",9.0,1.0,1.0,1.0,0.545,0.0025]
["TCGA_OV","TCGA-13-1403-01A","19:SBNO2:1154184:-:7:CCL26:75772254:-:fusion","SBNO2--CCL26","ENSG00000064932","ENSG00000006606",4.0,1.0,1.0,1.0,0.995,0.00120481927711]
["TCGA_OV","TCGA-13-1404-01A","5:ZNF608:124646679:-:19:ZNF317:9160114:+:fusion","ZNF608--ZNF317","ENSG00000168916","ENSG00000130803",2.0,1.0,1.0,1.0,0.769,0.0]
["TCGA_OV","TCGA-13-1404-01A","6:CNPY3:42929721:+:6:PTCRA:42923027:+:rev","CNPY3--PTCRA","ENSG00000137161","ENSG00000171611",2.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_OV","TCGA-13-1405-01A","1:CDC42:22081794:+:1:LDLRAD2:21821450:+:rev","CDC42--LDLRAD2","ENSG00000070831","ENSG00000187942",4.0,1.0,1.0,1.0,0.647,"NA"]
["TCGA_OV","TCGA-13-1405-01A","9:CREB3:35736311:+:9:UNC13B:35228015:+:rev","CREB3--UNC13B","ENSG00000107175","ENSG00000198722",3.0,1.0,1.0,1.0,0.433,"NA"]
["TCGA_OV","TCGA-13-1405-01A","9:NEK6:124258085:+:9:LHX2:124021099:+:rev","NEK6--LHX2","ENSG00000119408","ENSG00000106689",2.0,1.0,2.0,1.0,0.401,"NA"]
["TCGA_OV","TCGA-13-1408-01A","3:FNDC3B:172226947:+:3:LINC01968:194772156:+:reg","FNDC3B--LINC01968","ENSG00000075420","ENSG00000237222",5.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_OV","TCGA-13-1410-01A","6:C6orf106:34696446:-:6:AL157823.2:35734027:-:rev","C6orf106--AL157823.2","ENSG00000196821","ENSG00000232909",2.0,1.0,1.0,1.0,0.563,0.00193610842207]
["TCGA_OV","TCGA-13-1410-01A","12:LMNTD1:25630595:-:12:AC022509.1:26231985:-:rev","LMNTD1--AC022509.1","ENSG00000152936","ENSG00000255750",3.0,1.0,1.0,1.0,0.705,"NA"]
["TCGA_OV","TCGA-13-1411-01A","11:STIP1:64197595:+:11:AP003774.4:64327536:-:strandcross","STIP1--AP003774.4","ENSG00000168439","ENSG00000236935",8.0,1.0,1.0,1.0,0.688,0.0]
["TCGA_OV","TCGA-13-1411-01A","3:RYK:134250423:-:9:LINC01503:129333975:+:fusion","RYK--LINC01503","ENSG00000163785","ENSG00000233901",3.0,1.0,1.0,1.0,0.926,0.0]
["TCGA_OV","TCGA-13-1481-01A","2:PAX8:113220092:-:2:RPL37A:216578921:+:strandcross","PAX8--RPL37A","ENSG00000125618","ENSG00000197756",3.0,1.0,1.0,1.0,0.844,0.00104166666667]
["TCGA_OV","TCGA-13-1481-01A","17:JUP:41762983:-:17:P3H4:41806879:-:rev","JUP--P3H4","ENSG00000173801","ENSG00000141696",3.0,1.0,1.0,1.0,0.787,"NA"]
["TCGA_OV","TCGA-13-1483-01A","15:FAM81A:59440123:+:15:CLPX:65152536:-:strandcross","FAM81A--CLPX","ENSG00000157470","ENSG00000166855",2.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_OV","TCGA-13-1487-01A","8:AGO2:140635485:-:8:PTK2:140659678:-:rev","AGO2--PTK2","ENSG00000123908","ENSG00000169398",1.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_OV","TCGA-13-1488-01A","10:SPOCK2:72064178:-:10:DNAJB12:72336696:-:rev","SPOCK2--DNAJB12","ENSG00000107742","ENSG00000148719",7.0,1.0,1.0,1.0,0.783,"NA"]
["TCGA_OV","TCGA-13-1489-01A","3:QRICH1:49092397:-:17:MYH4:10469336:-:fusion","QRICH1--MYH4","ENSG00000198218","ENSG00000264424",5.0,2.0,2.0,2.0,0.401,0.00223214285714]
["TCGA_OV","TCGA-13-1489-02A","12:CLIP1:122422521:-:20:NCOA3:47637648:+:fusion","CLIP1--NCOA3","ENSG00000130779","ENSG00000124151",11.0,2.0,2.0,2.0,0.226,0.00330578512397]
["TCGA_OV","TCGA-13-1489-02A","3:QRICH1:49092397:-:17:MYH4:10469336:-:fusion","QRICH1--MYH4","ENSG00000198218","ENSG00000264424",3.0,2.0,2.0,2.0,0.156,0.0115702479339]
["TCGA_OV","TCGA-13-1495-01A","1:ZNF362:33276594:+:1:HPCA:32893524:+:rev","ZNF362--HPCA","ENSG00000160094","ENSG00000121905",2.0,1.0,1.0,1.0,0.418,"NA"]
["TCGA_OV","TCGA-13-1497-01A","13:AL354696.2:41162403:+:19:PRPF31:54126528:+:fusion","AL354696.2--PRPF31","ENSG00000278390","ENSG00000105618",3.0,1.0,1.0,1.0,0.95,0.0]
["TCGA_OV","TCGA-13-1497-01A","6:C6orf132:42142300:-:18:LINC01900:22043217:+:fusion","C6orf132--LINC01900","ENSG00000188112","ENSG00000265758",47.0,1.0,1.0,1.0,0.673509779208042,0.00490196078431]
["TCGA_OV","TCGA-13-1497-01A","19:BRD4:15263420:-:19:AKAP8:15362251:-:rev","BRD4--AKAP8","ENSG00000141867","ENSG00000105127",3.0,1.0,1.0,1.0,0.554,"NA"]
["TCGA_OV","TCGA-13-1501-01A","21:CHODL:17917400:+:21:AP000473.1:16640230:+:rev","CHODL--AP000473.1","ENSG00000154645","ENSG00000228798",48.0,1.0,1.0,1.0,0.920964745736424,0.0]
["TCGA_OV","TCGA-13-1501-01A","19:PROSER3:35758226:+:19:ZBTB32:35712917:+:rev","PROSER3--ZBTB32","ENSG00000167595","ENSG00000011590",2.0,1.0,1.0,1.0,0.693,"NA"]
["TCGA_OV","TCGA-13-1505-01A","20:SLX4IP:10601819:+:20:PLCB1:8881622:+:rev","SLX4IP--PLCB1","ENSG00000149346","ENSG00000182621",2.0,1.0,1.0,1.0,0.409,0.00311526479751]
["TCGA_OV","TCGA-13-1505-01A","X:AC234772.2:45849375:-:X:LINC01204:45521608:+:strandcross","AC234772.2--LINC01204","ENSG00000231566","ENSG00000229563",12.0,1.0,1.0,1.0,0.612,0.00155763239875]
["TCGA_OV","TCGA-13-1509-01A","2:ACP1:272305:+:1:PRRC2C:171591587:+:fusion","ACP1--PRRC2C","ENSG00000143727","ENSG00000117523",2.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_OV","TCGA-13-1510-01A","4:RBM47:40514516:-:4:AC107398.2:47557911:-:rev","RBM47--AC107398.2","ENSG00000163694","ENSG00000248254",4.0,1.0,1.0,1.0,0.567,0.0017825311943]
["TCGA_OV","TCGA-13-1511-01A","13:STK24:98576745:-:13:PCCA-AS1:100479763:-:rev","STK24--PCCA-AS1","ENSG00000102572","ENSG00000234650",2.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_OV","TCGA-13-1511-01A","22:LIMK2:31260077:+:22:HORMAD2-AS1:30018729:-:strandcross","LIMK2--HORMAD2-AS1","ENSG00000182541","ENSG00000227117",8.0,1.0,1.0,1.0,0.395,0.00117924528302]
["TCGA_OV","TCGA-13-1511-01A","22:LIMK2:31260077:+:22:HORMAD2-AS1:30040278:-:strandcross","LIMK2--HORMAD2-AS1","ENSG00000182541","ENSG00000227117",6.0,1.0,1.0,1.0,0.599,0.0]
["TCGA_OV","TCGA-13-1511-01A","16:LITAF:11586886:-:16:ZC3H7A:11782388:-:rev","LITAF--ZC3H7A","ENSG00000189067","ENSG00000122299",2.0,5.0,4.0,4.0,0.521,"NA"]
["TCGA_OV","TCGA-13-1511-01A","3:TFRC:196069455:-:3:UBXN7:196362687:-:rev","TFRC--UBXN7","ENSG00000072274","ENSG00000163960",7.0,1.0,1.0,1.0,0.859,"NA"]
["TCGA_OV","TCGA-13-1512-01A","15:ARPIN:89903216:-:15:IDH2:90087575:-:rev","ARPIN--IDH2","ENSG00000250021","ENSG00000182054",2.0,1.0,1.0,1.0,0.525,"NA"]
["TCGA_OV","TCGA-13-1512-01A","7:FLNC:128853621:+:7:CCDC136:128821799:+:rev","FLNC--CCDC136","ENSG00000128591","ENSG00000128596",2.0,1.0,1.0,1.0,0.608,"NA"]
["TCGA_OV","TCGA-13-A5FT-01A","7:GUSB:65974295:-:15:HERC1:63725513:-:fusion","GUSB--HERC1","ENSG00000169919","ENSG00000103657",3.0,1.0,1.0,1.0,0.913,0.0]
["TCGA_OV","TCGA-13-A5FT-01A","3:EIF4A2:186784477:+:3:AC068631.2:186597054:+:rev","EIF4A2--AC068631.2","ENSG00000156976","ENSG00000283149",2.0,1.0,1.0,1.0,0.651,"NA"]
["TCGA_OV","TCGA-20-0987-01A","3:UBP1:33412722:-:3:CLASP2:33501768:-:rev","UBP1--CLASP2","ENSG00000153560","ENSG00000163539",3.0,1.0,1.0,1.0,0.448,"NA"]
["TCGA_OV","TCGA-20-1682-01A","2:MEIS1:66512294:+:9:DENND1A:123792630:-:fusion","MEIS1--DENND1A","ENSG00000143995","ENSG00000119522",2.0,1.0,1.0,1.0,0.323,0.00248138957816]
["TCGA_OV","TCGA-20-1683-01A","20:GMEB2:63619267:-:20:ZBTB46-AS1:63816353:+:strandcross","GMEB2--ZBTB46-AS1","ENSG00000101216","ENSG00000231208",9.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_OV","TCGA-20-1683-01A","20:GMEB2:63619267:-:20:ARFRP1:63702217:-:rev","GMEB2--ARFRP1","ENSG00000101216","ENSG00000101246",21.0,1.0,1.0,1.0,0.794168907972362,"NA"]
["TCGA_OV","TCGA-20-1684-01A","1:IPO9-AS1:201828951:-:1:RABIF:202881223:-:rev","IPO9-AS1--RABIF","ENSG00000231871","ENSG00000183155",6.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_OV","TCGA-20-1684-01A","5:RPS14:150445609:-:20:GGT7:34854923:-:fusion","RPS14--GGT7","ENSG00000164587","ENSG00000131067",3.0,1.0,1.0,1.0,0.608,0.0]
["TCGA_OV","TCGA-20-1684-01A","6:BMP6:7862498:+:6:NQO2:2993931:+:rev","BMP6--NQO2","ENSG00000153162","ENSG00000124588",11.0,1.0,1.0,1.0,0.412,0.00267737617135]
["TCGA_OV","TCGA-20-1684-01A","12:MSI1:120351344:-:12:COQ5:120522363:-:rev","MSI1--COQ5","ENSG00000135097","ENSG00000110871",2.0,1.0,1.0,1.0,0.912,"NA"]
["TCGA_OV","TCGA-20-1684-01A","5:PFDN1:140281449:-:5:AC008438.1:140371182:-:rev","PFDN1--AC008438.1","ENSG00000113068","ENSG00000249637",1.0,2.0,1.0,1.0,0.924,"NA"]
["TCGA_OV","TCGA-20-1685-01A","2:MEIS1:66443048:+:12:AC138123.2:93004598:-:fusion","MEIS1--AC138123.2","ENSG00000143995","ENSG00000257322",54.0,2.0,1.0,1.0,0.901144977291321,0.0]
["TCGA_OV","TCGA-20-1687-01A","16:EARS2:23557205:-:19:C19orf68:48194653:+:fusion","EARS2--C19orf68","ENSG00000103356","ENSG00000185453",3.0,1.0,1.0,1.0,0.737,0.0]
["TCGA_OV","TCGA-23-1022-01A","6:SCAF8:154733930:+:6:OPRM1:154246693:+:rev","SCAF8--OPRM1","ENSG00000213079","ENSG00000112038",8.0,1.0,1.0,1.0,0.733,"NA"]
["TCGA_OV","TCGA-23-1024-01A","19:KLK8:50997751:-:19:NLRP4:55878794:+:strandcross","KLK8--NLRP4","ENSG00000129455","ENSG00000160505",4.0,1.0,1.0,1.0,0.827,0.0]
["TCGA_OV","TCGA-23-1024-01A","3:BSN:49554826:+:11:TREH:118663439:-:fusion","BSN--TREH","ENSG00000164061","ENSG00000118094",3.0,1.0,1.0,1.0,0.921,0.0]
["TCGA_OV","TCGA-23-1024-01A","3:MAP4:47998638:-:3:CDC25A:48184695:-:rev","MAP4--CDC25A","ENSG00000047849","ENSG00000164045",2.0,1.0,1.0,1.0,0.634,"NA"]
["TCGA_OV","TCGA-23-1026-01B","2:BOLA3:74147821:-:2:MOB1A:74159254:-:rev","BOLA3--MOB1A","ENSG00000163170","ENSG00000114978",2.0,1.0,1.0,1.0,0.985,"NA"]
["TCGA_OV","TCGA-23-1027-01A","1:CELSR2:109273670:+:22:PACSIN2:42876333:-:fusion","CELSR2--PACSIN2","ENSG00000143126","ENSG00000100266",2.0,1.0,1.0,1.0,0.825,4.85908649174E-4]
["TCGA_OV","TCGA-23-1027-01A","8:ASAP1:130443460:-:21:PFKL:44306681:+:fusion","ASAP1--PFKL","ENSG00000153317","ENSG00000141959",2.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_OV","TCGA-23-1028-01A","19:PRMT1:49677316:+:19:BCL2L12:49668851:+:rev","PRMT1--BCL2L12","ENSG00000126457","ENSG00000126453",1.0,1.0,1.0,1.0,0.863,"NA"]
["TCGA_OV","TCGA-23-1030-01A","8:AZIN1:102863807:-:11:AC113192.4:33805292:+:fusion","AZIN1--AC113192.4","ENSG00000155096","ENSG00000255169",6.0,1.0,1.0,1.0,0.22,0.00414937759336]
["TCGA_OV","TCGA-23-1030-01A","6:CCND3:42048501:-:6:C6orf132:42110291:-:rev","CCND3--C6orf132","ENSG00000112576","ENSG00000188112",17.0,2.0,1.0,1.0,0.716674896309839,"NA"]
["TCGA_OV","TCGA-23-1032-01A","10:HK1:69380095:+:10:DDX50:68946352:+:rev","HK1--DDX50","ENSG00000156515","ENSG00000107625",2.0,1.0,1.0,1.0,0.638,"NA"]
["TCGA_OV","TCGA-23-1032-01A","1:CDCA8:37695950:+:1:DNALI1:37565026:+:rev","CDCA8--DNALI1","ENSG00000134690","ENSG00000163879",4.0,1.0,1.0,1.0,0.955,"NA"]
["TCGA_OV","TCGA-23-1032-01A","2:STARD7:96208145:-:2:ANKRD39:96848444:-:rev","STARD7--ANKRD39","ENSG00000084090","ENSG00000163126",10.0,1.0,1.0,1.0,0.445,"NA"]
["TCGA_OV","TCGA-23-1032-01A","9:MIGA2:129040690:+:9:SPTAN1:128624328:+:rev","MIGA2--SPTAN1","ENSG00000148343","ENSG00000197694",1.0,1.0,1.0,1.0,0.865,"NA"]
["TCGA_OV","TCGA-23-1107-01A","17:DLG4:7217118:-:17:NAA38:7857198:-:rev","DLG4--NAA38","ENSG00000132535","ENSG00000183011",1.0,1.0,1.0,1.0,0.872,"NA"]
["TCGA_OV","TCGA-23-1107-01A","9:RABGAP1:122957209:+:9:AL162254.1:122637106:+:rev","RABGAP1--AL162254.1","ENSG00000011454","ENSG00000234156",54.0,1.0,2.0,1.0,0.928315262142924,"NA"]
["TCGA_OV","TCGA-23-1111-01A","15:MYO9A:71967984:-:15:AC009690.1:72320702:-:rev","MYO9A--AC009690.1","ENSG00000066933","ENSG00000260729",2.0,1.0,1.0,1.0,0.81,"NA"]
["TCGA_OV","TCGA-23-1114-01B","6:TRAM2:52516006:-:6:SUPT3H:44829857:-:reg","TRAM2--SUPT3H","ENSG00000065308","ENSG00000196284",16.0,1.0,1.0,1.0,0.326009667026582,0.00914634146341]
["TCGA_OV","TCGA-23-1116-01A","4:AC024230.1:19533618:+:12:TM7SF3:26990627:-:fusion","AC024230.1--TM7SF3","ENSG00000248515","ENSG00000064115",4.0,1.0,1.0,1.0,0.997,0.0]
["TCGA_OV","TCGA-23-1122-01A","19:RPS19:41861212:+:18:ENOSF1:674406:-:fusion","RPS19--ENOSF1","ENSG00000105372","ENSG00000132199",5.0,1.0,1.0,1.0,0.667,5.359056806E-4]
["TCGA_OV","TCGA-23-1123-01A","4:RNF4:2513797:+:4:PCGF3:764984:+:rev","RNF4--PCGF3","ENSG00000063978","ENSG00000185619",2.0,1.0,1.0,1.0,0.362,0.00107874865156]
["TCGA_OV","TCGA-23-1123-01A","15:PEAK1:77420006:-:15:LINGO1:77690901:-:rev","PEAK1--LINGO1","ENSG00000173517","ENSG00000169783",2.0,1.0,1.0,1.0,0.499,"NA"]
["TCGA_OV","TCGA-23-1809-01A","17:SPOP:49677933:-:2:BAZ2B:159373189:-:fusion","SPOP--BAZ2B","ENSG00000121067","ENSG00000123636",3.0,1.0,1.0,1.0,0.786,0.0]
["TCGA_OV","TCGA-23-2077-01A","15:RFX7:56142778:-:15:ZNF280D:56707306:-:rev","RFX7--ZNF280D","ENSG00000181827","ENSG00000137871",3.0,1.0,2.0,1.0,0.524,"NA"]
["TCGA_OV","TCGA-23-2077-01A","1:ZBTB17:15973039:-:1:HSPB7:16017852:-:rev","ZBTB17--HSPB7","ENSG00000116809","ENSG00000173641",1.0,1.0,1.0,1.0,0.936,"NA"]
["TCGA_OV","TCGA-23-2078-01A","11:MAML2:96341383:-:11:CCDC82:96373467:-:rev","MAML2--CCDC82","ENSG00000184384","ENSG00000149231",1.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_OV","TCGA-23-2078-01A","1:ILF2:153669836:-:1:GATAD2B:153828348:-:rev","ILF2--GATAD2B","ENSG00000143621","ENSG00000143614",9.0,1.0,1.0,1.0,0.598,"NA"]
["TCGA_OV","TCGA-23-2081-01A","11:NADSYN1:71475622:+:20:PRPF6:64029377:+:fusion","NADSYN1--PRPF6","ENSG00000172890","ENSG00000101161",2.0,1.0,1.0,1.0,0.326,0.00189573459716]
["TCGA_OV","TCGA-23-2084-01A","7:TMED4:44581093:-:3:SMC4:160432283:+:fusion","TMED4--SMC4","ENSG00000158604","ENSG00000113810",3.0,1.0,1.0,1.0,0.7,0.0]
["TCGA_OV","TCGA-24-0968-01A","12:CAMKK2:121296638:-:12:DIABLO:122216869:-:rev","CAMKK2--DIABLO","ENSG00000110931","ENSG00000184047",3.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_OV","TCGA-24-0968-01A","3:PTPN23:47396217:+:3:KIF9-AS1:47238404:+:rev","PTPN23--KIF9-AS1","ENSG00000076201","ENSG00000227398",1.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_OV","TCGA-24-0970-01B","9:SNX30:112864399:+:2:NOP58:202300234:+:fusion","SNX30--NOP58","ENSG00000148158","ENSG00000055044",2.0,1.0,1.0,1.0,0.719,0.0]
["TCGA_OV","TCGA-24-0970-01B","3:SLC6A6:14416453:+:3:AC093495.1:14165876:+:rev","SLC6A6--AC093495.1","ENSG00000131389","ENSG00000228242",22.0,1.0,1.0,1.0,0.661034820746405,"NA"]
["TCGA_OV","TCGA-24-0979-01A","4:CLCN3:169697734:+:3:BHLHE40-AS1:4900697:-:fusion","CLCN3--BHLHE40-AS1","ENSG00000109572","ENSG00000235831",28.0,1.0,1.0,1.0,0.807268166088474,0.0]
["TCGA_OV","TCGA-24-0982-01A","19:HOMER3:18931325:-:19:TRIP10:6749934:+:strandcross","HOMER3--TRIP10","ENSG00000268193","ENSG00000125733",4.0,1.0,1.0,1.0,0.372,0.004914004914]
["TCGA_OV","TCGA-24-1105-01A","8:ATAD2:123396187:-:8:ZFPM2:105798724:+:strandcross","ATAD2--ZFPM2","ENSG00000156802","ENSG00000169946",12.0,1.0,1.0,1.0,0.29,0.00422386483633]
["TCGA_OV","TCGA-24-1417-01A","19:ZNF98:22422195:-:1:FHL3:37999432:-:fusion","ZNF98--FHL3","ENSG00000197360","ENSG00000183386",3.0,1.0,1.0,1.0,0.668,0.0]
["TCGA_OV","TCGA-24-1419-01A","8:FUT10:33453216:-:3:AC025566.1:148226377:+:fusion","FUT10--AC025566.1","ENSG00000172728","ENSG00000244650",19.0,1.0,1.0,1.0,0.829583544739866,0.0]
["TCGA_OV","TCGA-24-1422-01A","1:RHBDL2:38915562:-:1:FAM151A:54609941:-:rev","RHBDL2--FAM151A","ENSG00000158315","ENSG00000162391",7.0,1.0,1.0,1.0,0.668,0.0]
["TCGA_OV","TCGA-24-1424-01A","16:CREBBP:3879832:-:10:WAC-AS1:28526008:-:fusion","CREBBP--WAC-AS1","ENSG00000005339","ENSG00000254635",6.0,1.0,1.0,1.0,0.763,0.00108459869848]
["TCGA_OV","TCGA-24-1425-01A","9:UBQLN1:83663875:-:6:AL591242.1:46670585:-:fusion","UBQLN1--AL591242.1","ENSG00000135018","ENSG00000242973",113.0,1.0,1.0,1.0,0.956160565703203,0.0]
["TCGA_OV","TCGA-24-1426-01A","7:AC073130.2:116255118:-:7:PAX4:127611676:-:rev","AC073130.2--PAX4","ENSG00000243243","ENSG00000106331",2.0,1.0,1.0,1.0,0.579,0.0]
["TCGA_OV","TCGA-24-1427-01A","7:BRAF:140807960:-:7:TMEM178B:141437608:+:strandcross","BRAF--TMEM178B","ENSG00000157764","ENSG00000261115",4.0,1.0,1.0,1.0,0.768,8.87311446318E-4]
["TCGA_OV","TCGA-24-1428-01A","12:ATP6V0A2:123748785:+:7:LSM8:118185647:+:fusion","ATP6V0A2--LSM8","ENSG00000185344","ENSG00000128534",2.0,1.0,1.0,1.0,0.919,2.04624514017E-4]
["TCGA_OV","TCGA-24-1428-01A","X:PRPS2:12809332:+:15:TP53BP1:43428168:-:fusion","PRPS2--TP53BP1","ENSG00000101911","ENSG00000067369",5.0,1.0,1.0,1.0,0.36,0.00572948639247]
["TCGA_OV","TCGA-24-1431-01A","5:LINC02100:18745998:-:5:CDH18:19747236:-:rev","LINC02100--CDH18","ENSG00000248693","ENSG00000145526",2.0,1.0,1.0,1.0,0.623,0.0]
["TCGA_OV","TCGA-24-1435-01A","19:DOT1L:2202779:+:1:PTPN7:202152699:-:fusion","DOT1L--PTPN7","ENSG00000104885","ENSG00000143851",5.0,1.0,1.0,1.0,0.594,0.0]
["TCGA_OV","TCGA-24-1435-01A","1:PTPN7:202150311:-:19:DOT1L:2208935:+:fusion","PTPN7--DOT1L","ENSG00000143851","ENSG00000104885",2.0,1.0,1.0,1.0,0.191,0.00570613409415]
["TCGA_OV","TCGA-24-1469-01A","15:CEMIP:80922137:+:14:AC244502.1:22481358:-:fusion","CEMIP--AC244502.1","ENSG00000103888","ENSG00000251002",50.0,1.0,1.0,1.0,0.883804896729969,0.0]
["TCGA_OV","TCGA-24-1469-01A","6:FOXP4:41578081:+:6:USP49:41871637:-:strandcross","FOXP4--USP49","ENSG00000137166","ENSG00000164663",5.0,1.0,1.0,1.0,0.441,0.00119760479042]
["TCGA_OV","TCGA-24-1470-01A","X:GTPBP6:314890:-:19:LIPE-AS1:42651087:+:fusion","GTPBP6--LIPE-AS1","ENSG00000178605","ENSG00000213904",13.0,1.0,1.0,1.0,0.532,0.00102774922919]
["TCGA_OV","TCGA-24-1474-01A","19:SMARCA4:11021967:+:19:AC011447.3:20132587:-:strandcross","SMARCA4--AC011447.3","ENSG00000127616","ENSG00000267383",6.0,1.0,1.0,1.0,0.545,0.00199600798403]
["TCGA_OV","TCGA-24-1548-01A","19:ELAVL1:8005495:-:19:AC004784.1:43137517:+:strandcross","ELAVL1--AC004784.1","ENSG00000066044","ENSG00000282943",4.0,1.0,1.0,1.0,0.727,0.0]
["TCGA_OV","TCGA-24-1550-01A","20:TASP1:13580897:-:20:R3HDML:44341196:+:strandcross","TASP1--R3HDML","ENSG00000089123","ENSG00000101074",3.0,1.0,1.0,1.0,0.469,9.63391136802E-4]
["TCGA_OV","TCGA-24-1552-01A","19:AC011447.3:20238288:-:3:GAP43:115676013:+:fusion","AC011447.3--GAP43","ENSG00000267383","ENSG00000172020",69.0,1.0,1.0,1.0,0.908915718857226,0.0]
["TCGA_OV","TCGA-24-1552-01A","4:ANKRD17:73135117:-:4:AC025244.1:75269495:-:rev","ANKRD17--AC025244.1","ENSG00000132466","ENSG00000251185",2.0,1.0,1.0,1.0,0.719,0.0]
["TCGA_OV","TCGA-24-1556-01A","4:AC024230.1:19533618:+:8:MSC:71842747:-:fusion","AC024230.1--MSC","ENSG00000248515","ENSG00000178860",25.0,1.0,1.0,1.0,0.842558814872567,6.62251655629E-4]
["TCGA_OV","TCGA-24-1558-01A","19:LINC00665:36330253:-:16:ITGAM:31261692:+:fusion","LINC00665--ITGAM","ENSG00000232677","ENSG00000169896",5.0,1.0,1.0,1.0,0.717,5.50055005501E-4]
["TCGA_OV","TCGA-24-1567-01A","21:TSPEAR:44711433:-:19:AC011444.2:6077020:+:fusion","TSPEAR--AC011444.2","ENSG00000175894","ENSG00000267262",13.0,1.0,1.0,1.0,0.395,0.00106723585912]
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["TCGA_OV","TCGA-24-1845-01A","6:CD2AP:47503440:+:18:AC023043.1:36180390:-:fusion","CD2AP--AC023043.1","ENSG00000198087","ENSG00000260552",807.0,2.0,1.0,1.0,0.999999531970424,0.0]
["TCGA_OV","TCGA-24-1847-01A","12:TDG:103966060:+:14:NRXN3:78242391:+:fusion","TDG--NRXN3","ENSG00000139372","ENSG00000021645",9.0,1.0,1.0,1.0,0.941,0.0]
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["TCGA_OV","TCGA-24-2023-01A","2:CASP8:201234112:+:2:PLCL1:198571856:+:rev","CASP8--PLCL1","ENSG00000064012","ENSG00000115896",7.0,1.0,1.0,1.0,0.86,0.00152905198777]
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["TCGA_OV","TCGA-24-2280-01A","19:PIP5K1C:3667322:-:19:MARK4:45258989:+:strandcross","PIP5K1C--MARK4","ENSG00000186111","ENSG00000007047",4.0,1.0,1.0,1.0,0.152,0.0138017565872]
["TCGA_OV","TCGA-24-2281-01A","2:FIGN:163734903:-:2:LINC01943:87439893:-:reg","FIGN--LINC01943","ENSG00000182263","ENSG00000280721",69.0,1.0,1.0,1.0,0.282657890608704,0.0018115942029]
["TCGA_OV","TCGA-24-2289-01A","6:TIAM2:155165409:+:6:ZDHHC14:157542585:+:reg","TIAM2--ZDHHC14","ENSG00000146426","ENSG00000175048",2.0,1.0,1.0,1.0,0.413,0.00283553875236]
["TCGA_OV","TCGA-24-2298-01A","10:BTAF1:91966757:+:1:CDC42SE1:151054321:-:fusion","BTAF1--CDC42SE1","ENSG00000095564","ENSG00000197622",9.0,1.0,1.0,1.0,0.349,0.00328227571116]
["TCGA_OV","TCGA-25-1313-01A","10:LRRC27:132355886:+:17:PITPNC1:67532802:+:fusion","LRRC27--PITPNC1","ENSG00000148814","ENSG00000154217",2.0,1.0,1.0,1.0,0.187,0.00642398286938]
["TCGA_OV","TCGA-25-1313-01A","9:VPS13A:77303062:+:9:SLC44A1:105299220:+:reg","VPS13A--SLC44A1","ENSG00000197969","ENSG00000070214",7.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_OV","TCGA-25-1315-01A","7:TNS3:47506907:-:7:AC091770.1:48660895:-:rev","TNS3--AC091770.1","ENSG00000136205","ENSG00000228173",2.0,1.0,1.0,1.0,0.827,0.0]
["TCGA_OV","TCGA-25-1319-01A","17:UBE2Z:48908820:+:17:GGA3:75237532:-:strandcross","UBE2Z--GGA3","ENSG00000159202","ENSG00000125447",2.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_OV","TCGA-25-1319-01A","2:NCK2:105816613:+:2:ACTR3:113913172:+:reg","NCK2--ACTR3","ENSG00000071051","ENSG00000115091",22.0,1.0,1.0,1.0,0.750146431508686,0.0]
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["TCGA_OV","TCGA-25-1320-01A","19:SAMD4B:39342576:+:19:PCAT19:41479284:-:strandcross","SAMD4B--PCAT19","ENSG00000179134","ENSG00000267107",2.0,1.0,1.0,1.0,0.956,0.0]
["TCGA_OV","TCGA-25-1322-01A","11:ARRB1:75281075:-:11:AP001922.5:75594101:+:strandcross","ARRB1--AP001922.5","ENSG00000137486","ENSG00000255326",7.0,1.0,1.0,1.0,0.321,0.00199600798403]
["TCGA_OV","TCGA-25-1322-01A","3:OPA1:193593409:+:12:TIGAR:4331280:+:fusion","OPA1--TIGAR","ENSG00000198836","ENSG00000078237",3.0,1.0,1.0,1.0,0.183,0.00499001996008]
["TCGA_OV","TCGA-25-1323-01A","9:WHRN:114504184:-:6:LTA:31572734:+:fusion","WHRN--LTA","ENSG00000095397","ENSG00000226979",4.0,1.0,1.0,1.0,0.493,0.00244498777506]
["TCGA_OV","TCGA-25-1326-01A","10:FBXW4:101667886:-:12:AC084816.1:22861069:+:fusion","FBXW4--AC084816.1","ENSG00000107829","ENSG00000256995",4.0,1.0,1.0,1.0,0.657,0.0]
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["TCGA_OV","TCGA-25-1626-01A","19:WDR62:36060030:+:19:AC011445.1:39318358:-:strandcross","WDR62--AC011445.1","ENSG00000075702","ENSG00000268262",5.0,1.0,1.0,1.0,0.176,0.0077519379845]
["TCGA_OV","TCGA-25-1628-01A","19:ZNF43:21845392:-:2:ZNF514:95152769:-:fusion","ZNF43--ZNF514","ENSG00000198521","ENSG00000144026",2.0,1.0,1.0,1.0,0.961,0.0]
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["TCGA_OV","TCGA-25-1635-01A","10:EPC1:32346763:-:10:GATA3:8055287:+:strandcross","EPC1--GATA3","ENSG00000120616","ENSG00000107485",4.0,1.0,1.0,1.0,0.909,0.0]
["TCGA_OV","TCGA-25-1870-01A","12:DENND5B:31590706:-:19:AC011447.3:20132587:-:fusion","DENND5B--AC011447.3","ENSG00000170456","ENSG00000267383",11.0,1.0,1.0,1.0,0.692,0.0011641443539]
["TCGA_OV","TCGA-25-1870-01A","12:PEX5:7191700:+:12:LINC02367:9375858:+:reg","PEX5--LINC02367","ENSG00000139197","ENSG00000260423",1.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_OV","TCGA-25-1877-01A","19:WDR62:36090520:+:19:LINC00665:36316070:-:strandcross","WDR62--LINC00665","ENSG00000075702","ENSG00000232677",49.0,1.0,1.0,1.0,0.894422192237207,0.0]
["TCGA_OV","TCGA-25-2392-01A","2:HDLBP:241315570:-:2:ATF2:175093267:-:reg","HDLBP--ATF2","ENSG00000115677","ENSG00000115966",6.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_OV","TCGA-25-2393-01A","18:GAREM1:32392895:-:18:AQP4-AS1:27188743:+:strandcross","GAREM1--AQP4-AS1","ENSG00000141441","ENSG00000260372",18.0,1.0,1.0,1.0,0.480359201080137,0.00363196125908]
["TCGA_OV","TCGA-25-2399-01A","4:GATB:151758772:-:4:LRBA:150735366:-:reg","GATB--LRBA","ENSG00000059691","ENSG00000198589",8.0,1.0,1.0,1.0,0.777,0.0]
["TCGA_OV","TCGA-29-1688-01A","15:C15orf57:40564976:-:17:TEN1:76000141:+:fusion","C15orf57--TEN1","ENSG00000128891","ENSG00000257949",2.0,1.0,1.0,1.0,0.459,0.00488997555012]
["TCGA_OV","TCGA-29-1691-01A","11:DSCAML1:117776791:-:5:LINC01332:74328285:-:fusion","DSCAML1--LINC01332","ENSG00000177103","ENSG00000250446",38.0,1.0,1.0,1.0,0.879280107915999,0.0]
["TCGA_OV","TCGA-29-1691-01A","18:ROCK1:21039472:-:18:AC090912.2:22786858:-:rev","ROCK1--AC090912.2","ENSG00000067900","ENSG00000266850",3.0,1.0,1.0,1.0,0.928,0.0]
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["TCGA_OV","TCGA-29-1696-01A","16:RNPS1:2268055:-:19:KCNJ14:48464181:+:fusion","RNPS1--KCNJ14","ENSG00000205937","ENSG00000182324",2.0,1.0,1.0,1.0,0.844,0.0]
["TCGA_OV","TCGA-29-1698-01A","14:DHRS4L2:23970332:+:13:PSPC1:19677823:-:fusion","DHRS4L2--PSPC1","ENSG00000187630","ENSG00000121390",5.0,1.0,1.0,1.0,0.646,0.00177304964539]
["TCGA_OV","TCGA-29-1699-01A","2:GNLY:85696056:+:1:SYTL1:27349080:+:fusion","GNLY--SYTL1","ENSG00000115523","ENSG00000142765",1.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_OV","TCGA-29-1699-01A","3:SEC62:169988359:+:3:MECOM:169143832:-:strandcross","SEC62--MECOM","ENSG00000008952","ENSG00000085276",3.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_OV","TCGA-29-1701-01A","19:PSMC4:39974828:+:13:RFC3:33966087:+:fusion","PSMC4--RFC3","ENSG00000013275","ENSG00000133119",76.0,1.0,1.0,1.0,0.886268773784677,0.0]
["TCGA_OV","TCGA-29-1702-01A","12:GTF2H3:123633872:+:12:EIF2B1:123630533:-:strandcross","GTF2H3--EIF2B1","ENSG00000111358","ENSG00000111361",68.0,1.0,1.0,1.0,0.911227996466162,0.00451467268623]
["TCGA_OV","TCGA-29-1702-01A","17:METTL16:2420731:-:6:DSP:7574086:+:fusion","METTL16--DSP","ENSG00000127804","ENSG00000096696",2.0,1.0,1.0,1.0,0.933,0.0]
["TCGA_OV","TCGA-29-1702-01A","8:FAM110B:57994806:+:8:STMN2:79654871:+:reg","FAM110B--STMN2","ENSG00000169122","ENSG00000104435",4.0,1.0,1.0,1.0,0.484,0.0019305019305]
["TCGA_OV","TCGA-29-1705-01A","15:DPP8:65497864:-:19:AC022098.1:14168777:+:fusion","DPP8--AC022098.1","ENSG00000074603","ENSG00000267169",19.0,2.0,1.0,1.0,0.698399446730619,0.00131752305665]
["TCGA_OV","TCGA-29-1761-01A","12:RASSF8:25995130:+:10:PTEN:87957853:+:fusion","RASSF8--PTEN","ENSG00000123094","ENSG00000171862",2.0,1.0,1.0,1.0,0.372,0.00237529691211]
["TCGA_OV","TCGA-29-1763-01A","11:FCHSD2:72887470:-:11:NUDT22:64230432:+:strandcross","FCHSD2--NUDT22","ENSG00000137478","ENSG00000149761",13.0,1.0,1.0,1.0,0.26,0.00365853658537]
["TCGA_OV","TCGA-29-1770-01A","8:TRPS1:115669345:-:7:MIOS:7572436:+:fusion","TRPS1--MIOS","ENSG00000104447","ENSG00000164654",3.0,1.0,1.0,1.0,0.758,0.0]
["TCGA_OV","TCGA-29-1776-01A","11:TENM4:79148710:-:6:MAP3K5:136720589:-:fusion","TENM4--MAP3K5","ENSG00000149256","ENSG00000197442",6.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_OV","TCGA-29-1783-01A","19:AC008554.1:20432711:+:19:MUC16:8967189:-:strandcross","AC008554.1--MUC16","ENSG00000269043","ENSG00000181143",6.0,1.0,1.0,1.0,0.41,0.00257731958763]
["TCGA_OV","TCGA-29-1783-01A","7:PHTF2:77798971:+:7:RHBDD2:75881365:+:rev","PHTF2--RHBDD2","ENSG00000006576","ENSG00000005486",2.0,1.0,1.0,1.0,0.592,0.00128865979381]
["TCGA_OV","TCGA-29-1784-01A","14:SYNJ2BP-COX16:70416900:-:20:TRPC4AP:35021332:-:fusion","SYNJ2BP-COX16--TRPC4AP","ENSG00000258644","ENSG00000100991",4.0,1.0,1.0,1.0,0.713,0.00151515151515]
["TCGA_OV","TCGA-29-2414-01A","16:HERPUD1:56932391:+:3:AC125608.1:191589903:+:fusion","HERPUD1--AC125608.1","ENSG00000051108","ENSG00000223812",436.0,3.0,2.0,2.0,0.909154330080399,0.0]
["TCGA_OV","TCGA-29-A5NZ-01A","14:DYNC1H1:101964947:+:14:CINP:102359587:-:strandcross","DYNC1H1--CINP","ENSG00000197102","ENSG00000100865",2.0,1.0,1.0,1.0,0.576,0.00268576544315]
["TCGA_OV","TCGA-29-A5NZ-01A","1:CTNNBIP1:9910095:-:1:RHBDL2:38919337:-:rev","CTNNBIP1--RHBDL2","ENSG00000178585","ENSG00000158315",8.0,1.0,1.0,1.0,0.863,8.95255147717E-4]
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["TCGA_OV","TCGA-30-1718-01A","11:RAB6A:73760566:-:11:COA4:73873394:-:rev","RAB6A--COA4","ENSG00000175582","ENSG00000181924",5.0,1.0,1.0,1.0,0.971,"NA"]
["TCGA_OV","TCGA-30-1718-01A","1:SDC3:30908449:-:1:PUM1:30995220:-:rev","SDC3--PUM1","ENSG00000162512","ENSG00000134644",3.0,1.0,1.0,1.0,0.466,"NA"]
["TCGA_OV","TCGA-30-1718-01A","5:SQSTM1:179811682:+:5:CANX:179709919:+:rev","SQSTM1--CANX","ENSG00000161011","ENSG00000127022",2.0,1.0,1.0,1.0,0.561,"NA"]
["TCGA_OV","TCGA-30-1718-01A","7:NOD1:30478606:-:7:GGCT:30500681:-:rev","NOD1--GGCT","ENSG00000106100","ENSG00000006625",3.0,1.0,2.0,1.0,0.99,"NA"]
["TCGA_OV","TCGA-30-1857-01A","3:UBE2E1:23811510:+:3:RARB:25461193:+:reg","UBE2E1--RARB","ENSG00000170142","ENSG00000077092",3.0,1.0,1.0,1.0,0.829,0.0]
["TCGA_OV","TCGA-30-1862-01A","10:CCNY:35337207:+:10:AL158834.2:32268901:+:rev","CCNY--AL158834.2","ENSG00000108100","ENSG00000227253",37.0,2.0,2.0,2.0,0.908642438355888,0.0]
["TCGA_OV","TCGA-30-1866-01A","2:RNASEH1-AS1:3558998:+:2:TRAPPC12:3387620:+:rev","RNASEH1-AS1--TRAPPC12","ENSG00000234171","ENSG00000171853",2.0,1.0,1.0,1.0,0.718,"NA"]
["TCGA_OV","TCGA-30-1892-01A","15:SIN3A:75455788:-:16:TERF2IP:75760050:+:fusion","SIN3A--TERF2IP","ENSG00000169375","ENSG00000166848",2.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_OV","TCGA-31-1950-01A","4:FRYL:48780078:-:4:FIP1L1:53442653:+:strandcross","FRYL--FIP1L1","ENSG00000075539","ENSG00000145216",2.0,2.0,1.0,1.0,0.302,0.0158394931362]
["TCGA_OV","TCGA-31-1950-01A","5:CTNNA1:138783372:+:5:LINC01332:74328285:-:strandcross","CTNNA1--LINC01332","ENSG00000044115","ENSG00000250446",3.0,1.0,1.0,1.0,0.922,0.0]
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["TCGA_OV","TCGA-61-1728-01A","12:PRKAG1:49018732:-:12:FMNL3:49665908:-:rev","PRKAG1--FMNL3","ENSG00000181929","ENSG00000161791",2.0,1.0,1.0,1.0,0.88,"NA"]
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["TCGA_OV","TCGA-61-1738-01A","19:GEMIN7:45080029:+:19:APOC1:44919173:+:rev","GEMIN7--APOC1","ENSG00000142252","ENSG00000130208",6.0,1.0,1.0,1.0,0.574,"NA"]
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["TCGA_OV","TCGA-61-1917-01A","14:NEDD8-MDP1:24232250:-:14:TGM1:24255517:-:rev","NEDD8-MDP1--TGM1","ENSG00000255526","ENSG00000092295",2.0,1.0,1.0,1.0,0.967,"NA"]
["TCGA_OV","TCGA-61-1917-01A","1:LRIG2:113107757:+:1:MOV10:112686966:+:rev","LRIG2--MOV10","ENSG00000198799","ENSG00000155363",2.0,1.0,1.0,1.0,0.868,"NA"]
["TCGA_OV","TCGA-61-1917-01A","8:IQANK1:143739948:+:8:ZNF707:143709253:+:rev","IQANK1--ZNF707","ENSG00000203499","ENSG00000181135",4.0,2.0,2.0,2.0,0.513,"NA"]
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["TCGA_OV","TCGA-61-2094-01A","15:RMDN3:40751426:-:15:SPINT1-AS1:40838686:-:rev","RMDN3--SPINT1-AS1","ENSG00000137824","ENSG00000261183",7.0,1.0,1.0,1.0,0.732,"NA"]
["TCGA_OV","TCGA-61-2094-01A","20:HELZ2:63570504:-:20:SOX18:64048962:-:rev","HELZ2--SOX18","ENSG00000130589","ENSG00000203883",2.0,1.0,1.0,1.0,0.884,"NA"]
["TCGA_OV","TCGA-61-2095-01A","17:ITGB4:75729436:+:12:RDH5:55723886:+:fusion","ITGB4--RDH5","ENSG00000132470","ENSG00000135437",2.0,1.0,1.0,1.0,0.944,0.0]
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["TCGA_PAAD","TCGA-HZ-8005-01A","22:TMEM184B:38226779:-:22:Z82198.2:33166181:+:strandcross","TMEM184B--Z82198.2","ENSG00000198792","ENSG00000232073",5.0,1.0,1.0,1.0,0.991,0.0]
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["TCGA_PRAD","TCGA-EJ-5518-01A","1:RFWD2:176163815:-:1:AL591885.1:244024966:+:strandcross","RFWD2--AL591885.1","ENSG00000143207","ENSG00000226828",1.0,1.0,1.0,1.0,0.733,0.00230414746544]
["TCGA_PRAD","TCGA-EJ-5519-01A","9:PTPRD:10612398:-:12:PPFIA2-AS1:81279192:+:fusion","PTPRD--PPFIA2-AS1","ENSG00000153707","ENSG00000257467",7.0,1.0,1.0,1.0,0.32,0.0225563909774]
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["TCGA_PRAD","TCGA-EJ-5530-01A","3:SETD5:9397977:+:3:GLB1:33014310:-:strandcross","SETD5--GLB1","ENSG00000168137","ENSG00000170266",2.0,1.0,1.0,1.0,0.499,0.0153846153846]
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["TCGA_PRAD","TCGA-EJ-7788-01A","2:LINC01237:241882635:+:3:CPNE9:9712725:+:fusion","LINC01237--CPNE9","ENSG00000233806","ENSG00000144550",6.0,1.0,1.0,1.0,0.977,0.0]
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["TCGA_PRAD","TCGA-EJ-8469-01A","21:MRPS6:34073745:+:21:TMPRSS2:41489593:-:strandcross","MRPS6--TMPRSS2","ENSG00000243927","ENSG00000184012",3.0,1.0,1.0,1.0,0.223,0.0196078431373]
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["TCGA_PRAD","TCGA-G9-6343-01A","3:ACPP:132356855:+:4:RPL9:39454944:-:fusion","ACPP--RPL9","ENSG00000014257","ENSG00000163682",3.0,4.0,1.0,1.0,0.995,0.0]
["TCGA_PRAD","TCGA-G9-6356-01A","1:PPP1R12B:202349142:+:1:AL031275.1:168763616:-:strandcross","PPP1R12B--AL031275.1","ENSG00000077157","ENSG00000235736",8.0,1.0,1.0,1.0,0.481,0.0082135523614]
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["TCGA_PRAD","TCGA-HC-7080-01A","4:INTU:127663584:+:4:AC093831.1:130881347:-:strandcross","INTU--AC093831.1","ENSG00000164066","ENSG00000250503",18.0,1.0,1.0,1.0,0.863919836931859,0.00728597449909]
["TCGA_PRAD","TCGA-HC-7081-01A","12:MBD6:57523011:+:12:AC023790.2:13022014:+:rev","MBD6--AC023790.2","ENSG00000166987","ENSG00000255621",9.0,1.0,1.0,1.0,0.528,0.0228571428571]
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["TCGA_PRAD","TCGA-HC-7736-01A","6:MYO6:75749423:+:6:AL591030.1:76586566:-:strandcross","MYO6--AL591030.1","ENSG00000196586","ENSG00000236635",4.0,1.0,1.0,1.0,0.954,0.00226244343891]
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["TCGA_PRAD","TCGA-HC-7748-01A","3:VGLL4:11601833:-:9:AL355674.1:74372172:+:fusion","VGLL4--AL355674.1","ENSG00000144560","ENSG00000227809",26.0,1.0,1.0,1.0,0.836141339218911,0.00614754098361]
["TCGA_PRAD","TCGA-HC-7749-01A","2:RHBDD1:226914351:+:5:C1QTNF3-AMACR:34005899:-:fusion","RHBDD1--C1QTNF3-AMACR","ENSG00000144468","ENSG00000242110",2.0,1.0,1.0,1.0,0.76,0.00413223140496]
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["TCGA_PRAD","TCGA-HC-7821-01A","1:FAF1:50857929:-:1:AL365440.2:158494554:-:rev","FAF1--AL365440.2","ENSG00000185104","ENSG00000236656",14.0,1.0,1.0,1.0,0.675,0.0078431372549]
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["TCGA_PRAD","TCGA-HC-8260-01A","3:GOLGB1:121749632:-:3:PCCB:136326803:+:strandcross","GOLGB1--PCCB","ENSG00000173230","ENSG00000114054",2.0,1.0,1.0,1.0,0.738,0.0118343195266]
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["TCGA_SARC","TCGA-3B-A9HL-01A","9:SURF2:133357182:+:6:DNAH8:38822838:+:fusion","SURF2--DNAH8","ENSG00000148291","ENSG00000124721",2.0,1.0,1.0,1.0,0.512,0.0233644859813]
["TCGA_SARC","TCGA-3B-A9HO-01A","12:LIN7A:80845730:-:20:LINC01432:22073388:+:fusion","LIN7A--LINC01432","ENSG00000111052","ENSG00000234435",7.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","1:UBAP2L:154237136:+:8:LINC01592:68924495:-:fusion","UBAP2L--LINC01592","ENSG00000143569","ENSG00000253658",55.0,1.0,1.0,1.0,0.963428765167851,0.0]
["TCGA_SARC","TCGA-3B-A9HO-01A","21:ADAMTS5:26965288:-:12:AC084033.3:57931737:-:fusion","ADAMTS5--AC084033.3","ENSG00000154736","ENSG00000257698",75.0,1.0,1.0,1.0,0.99065752795831,0.0]
["TCGA_SARC","TCGA-3B-A9HR-01A","7:CALD1:134867804:+:7:EXOC4:133317284:+:rev","CALD1--EXOC4","ENSG00000122786","ENSG00000131558",2.0,1.0,1.0,1.0,0.895,0.0028901734104]
["TCGA_SARC","TCGA-3B-A9HS-01A","12:CDK17:96289167:-:12:AC078955.1:81094732:-:reg","CDK17--AC078955.1","ENSG00000059758","ENSG00000258026",5.0,1.0,1.0,1.0,0.856,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","12:CTDSP2:57846372:-:17:TADA2A:37462078:+:fusion","CTDSP2--TADA2A","ENSG00000175215","ENSG00000276234",39.0,1.0,1.0,1.0,0.714061777071926,0.00584795321637]
["TCGA_SARC","TCGA-3B-A9HS-01A","12:LRP1:57156283:+:12:AC078923.1:75631314:-:strandcross","LRP1--AC078923.1","ENSG00000123384","ENSG00000258077",7.0,1.0,1.0,1.0,0.341,0.0175438596491]
["TCGA_SARC","TCGA-3B-A9HS-01A","14:CHGA:92932851:+:12:AC025569.1:70520199:+:fusion","CHGA--AC025569.1","ENSG00000100604","ENSG00000258168",5.0,1.0,1.0,1.0,0.589,0.0116959064327]
["TCGA_SARC","TCGA-3B-A9HS-01A","17:ACACA:37330173:-:12:LINC02381:54131990:+:fusion","ACACA--LINC02381","ENSG00000278540","ENSG00000250742",3.0,1.0,1.0,1.0,0.687,0.00877192982456]
["TCGA_SARC","TCGA-3B-A9HS-01A","17:SKA2:59131281:-:17:AC011990.1:70313388:-:rev","SKA2--AC011990.1","ENSG00000182628","ENSG00000267109",11.0,1.0,1.0,1.0,0.494,0.0146198830409]
["TCGA_SARC","TCGA-3B-A9HS-01A","6:RWDD1:116571655:+:12:AC090502.1:74157884:-:fusion","RWDD1--AC090502.1","ENSG00000111832","ENSG00000251138",14.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_SARC","TCGA-3B-A9HV-01A","9:C9orf3:95060810:+:3:AC078785.2:113051705:-:fusion","C9orf3--AC078785.2","ENSG00000148120","ENSG00000241219",10.0,1.0,1.0,1.0,0.569,0.0141342756184]
["TCGA_SARC","TCGA-3B-A9I1-01A","19:ZNF787:56103139:-:12:OVCH1-AS1:29461734:+:fusion","ZNF787--OVCH1-AS1","ENSG00000142409","ENSG00000257599",23.0,1.0,1.0,1.0,0.718513967750734,0.00955414012739]
["TCGA_SARC","TCGA-3R-A8YX-01A","12:TMTC2:82687669:+:12:LINC02373:69460605:+:rev","TMTC2--LINC02373","ENSG00000179104","ENSG00000257507",4.0,1.0,1.0,1.0,0.936,0.00375939849624]
["TCGA_SARC","TCGA-DX-A1KU-01A","12:RAP1B:68611043:+:12:AC090673.1:65877132:-:strandcross","RAP1B--AC090673.1","ENSG00000127314","ENSG00000197301",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_SARC","TCGA-DX-A1KU-01A","12:RAP1B:68611052:+:12:AC090673.1:65866954:-:strandcross","RAP1B--AC090673.1","ENSG00000127314","ENSG00000197301",3.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_SARC","TCGA-DX-A1KU-01A","3:EPHA3:89107836:+:3:ZNF654:88113115:+:rev","EPHA3--ZNF654","ENSG00000044524","ENSG00000175105",2.0,1.0,1.0,1.0,0.847,"NA"]
["TCGA_SARC","TCGA-DX-A1KW-01A","12:FMNL3:49668471:-:12:AC020637.1:58544124:+:strandcross","FMNL3--AC020637.1","ENSG00000161791","ENSG00000258231",15.0,1.0,1.0,1.0,0.715,0.00460829493088]
["TCGA_SARC","TCGA-DX-A1KW-01A","12:PTPN11:112456063:+:12:AC020637.1:58812414:+:rev","PTPN11--AC020637.1","ENSG00000179295","ENSG00000258231",329.0,1.0,1.0,1.0,0.979637515991839,0.0]
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["TCGA_SARC","TCGA-DX-A1KZ-01A","10:SIRT1:67887533:+:10:NRG3-AS1:82230365:-:strandcross","SIRT1--NRG3-AS1","ENSG00000096717","ENSG00000225738",7.0,1.0,1.0,1.0,0.968,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","12:CPSF6:69239706:+:6:AL445259.1:123468816:+:fusion","CPSF6--AL445259.1","ENSG00000111605","ENSG00000235535",9.0,1.0,1.0,1.0,0.931,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","12:METTL1:57769565:-:12:AC025263.1:69715587:-:rev","METTL1--AC025263.1","ENSG00000037897","ENSG00000247131",3.0,1.0,1.0,1.0,0.553,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","5:TRIO:14270899:+:9:AL162254.1:122637106:+:fusion","TRIO--AL162254.1","ENSG00000038382","ENSG00000234156",5.0,1.0,1.0,1.0,0.939,0.00302114803625]
["TCGA_SARC","TCGA-DX-A1KZ-01A","8:WWP1:86442778:+:12:AC083805.1:57872088:-:fusion","WWP1--AC083805.1","ENSG00000123124","ENSG00000245651",11.0,1.0,1.0,1.0,0.497,0.00604229607251]
["TCGA_SARC","TCGA-DX-A1L0-01A","12:SLC16A7:59596236:+:1:OVAAL:180562204:+:fusion","SLC16A7--OVAAL","ENSG00000118596","ENSG00000236719",4.0,1.0,1.0,1.0,0.5,0.0185185185185]
["TCGA_SARC","TCGA-DX-A1L0-01A","6:TIAM2:155165409:+:6:AL033504.1:147733729:+:rev","TIAM2--AL033504.1","ENSG00000146426","ENSG00000227681",10.0,1.0,1.0,1.0,0.416,0.0231481481481]
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["TCGA_SARC","TCGA-DX-A1L2-01A","3:ATG7:11426926:+:3:AC090952.2:14640142:+:reg","ATG7--AC090952.2","ENSG00000197548","ENSG00000283392",4.0,1.0,1.0,1.0,0.961,0.00696864111498]
["TCGA_SARC","TCGA-DX-A1L3-01A","12:NTN4:95786939:-:12:RAP1B:68657101:+:strandcross","NTN4--RAP1B","ENSG00000074527","ENSG00000127314",458.0,1.0,1.0,1.0,0.224061452756169,0.0147492625369]
["TCGA_SARC","TCGA-DX-A1L3-01A","18:RNF138:32092886:+:12:RAP1B:68657101:+:fusion","RNF138--RAP1B","ENSG00000134758","ENSG00000127314",4.0,1.0,1.0,1.0,0.295,0.00778210116732]
["TCGA_SARC","TCGA-DX-A1L3-01A","5:CDH18:19981060:-:12:AC020637.1:58801260:+:fusion","CDH18--AC020637.1","ENSG00000145526","ENSG00000258231",3.0,1.0,1.0,1.0,0.264,0.0117994100295]
["TCGA_SARC","TCGA-DX-A1L4-01A","12:FRS2:69532056:+:12:AC091534.1:75250493:+:reg","FRS2--AC091534.1","ENSG00000166225","ENSG00000254451",54.0,1.0,1.0,1.0,0.992290925859773,0.0031847133758]
["TCGA_SARC","TCGA-DX-A1L4-01A","12:MON2:62556192:+:12:LINC01619:91993529:-:strandcross","MON2--LINC01619","ENSG00000061987","ENSG00000257242",4.0,1.0,1.0,1.0,0.249,0.00636942675159]
["TCGA_SARC","TCGA-DX-A23R-01A","12:MDM2:68816945:+:12:ATF7:53601021:-:strandcross","MDM2--ATF7","ENSG00000135679","ENSG00000267281",11.0,1.0,1.0,1.0,0.697,0.00374531835206]
["TCGA_SARC","TCGA-DX-A23R-01A","12:PAWR:79689729:-:12:AC090673.2:65935129:-:reg","PAWR--AC090673.2","ENSG00000177425","ENSG00000256083",15.0,1.0,1.0,1.0,0.726,0.00892857142857]
["TCGA_SARC","TCGA-DX-A23T-01A","12:LINC01479:67932389:+:12:OS9:57715760:+:rev","LINC01479--OS9","ENSG00000255772","ENSG00000135506",2.0,1.0,1.0,1.0,0.941,0.0]
["TCGA_SARC","TCGA-DX-A23T-01A","12:YEATS4:69365884:+:12:LINC02442:67571305:-:strandcross","YEATS4--LINC02442","ENSG00000127337","ENSG00000256077",3.0,1.0,1.0,1.0,0.976,0.0]
["TCGA_SARC","TCGA-DX-A23U-01A","1:DAB1:57290964:-:1:TMEM59:54041805:-:reg","DAB1--TMEM59","ENSG00000173406","ENSG00000116209",5.0,1.0,1.0,1.0,0.919,0.00234741784038]
["TCGA_SARC","TCGA-DX-A23U-01A","1:OMA1:58534158:-:1:AL138900.3:157282578:+:strandcross","OMA1--AL138900.3","ENSG00000162600","ENSG00000271736",3.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SARC","TCGA-DX-A23U-01A","1:PLEKHA6:204359694:-:1:LINC01358:59240308:+:strandcross","PLEKHA6--LINC01358","ENSG00000143850","ENSG00000237352",2.0,1.0,1.0,1.0,0.933,0.00234741784038]
["TCGA_SARC","TCGA-DX-A23Y-01A","12:ACSS3:81078428:+:12:KRT77:52697896:-:strandcross","ACSS3--KRT77","ENSG00000111058","ENSG00000189182",2.0,1.0,1.0,1.0,0.948,0.0]
["TCGA_SARC","TCGA-DX-A23Y-01A","16:LONP2:48296165:+:12:IKBIP:98614340:-:fusion","LONP2--IKBIP","ENSG00000102910","ENSG00000166130",3.0,1.0,1.0,1.0,0.869,0.00222222222222]
["TCGA_SARC","TCGA-DX-A23Z-01A","10:PRKG1:51153330:+:12:AC020611.2:64042940:-:fusion","PRKG1--AC020611.2","ENSG00000185532","ENSG00000255886",6.0,1.0,1.0,1.0,0.994,0.0]
["TCGA_SARC","TCGA-DX-A240-01A","12:AC008014.1:46387972:+:12:IFNG:68155487:-:strandcross","AC008014.1--IFNG","ENSG00000257261","ENSG00000111537",4.0,1.0,1.0,1.0,0.726,0.00589970501475]
["TCGA_SARC","TCGA-DX-A240-01A","X:RP2:46877590:+:12:CCND2-AS1:4249193:-:fusion","RP2--CCND2-AS1","ENSG00000102218","ENSG00000256164",104.0,1.0,1.0,1.0,0.990425121907705,0.0]
["TCGA_SARC","TCGA-DX-A2IZ-01A","12:HCFC2:104068107:+:12:STAT2:56356578:-:strandcross","HCFC2--STAT2","ENSG00000111727","ENSG00000170581",2.0,1.0,1.0,1.0,0.45,0.00217391304348]
["TCGA_SARC","TCGA-DX-A2J0-01A","12:CNOT2:70311017:+:1:DNM3OS:172144437:-:fusion","CNOT2--DNM3OS","ENSG00000111596","ENSG00000230630",2.0,1.0,1.0,1.0,0.783,0.0]
["TCGA_SARC","TCGA-DX-A2J1-01A","11:CPT1A:68793315:-:12:AC121761.1:75484890:-:fusion","CPT1A--AC121761.1","ENSG00000110090","ENSG00000257497",54.0,1.0,1.0,1.0,0.488006222232109,0.00663716814159]
["TCGA_SARC","TCGA-DX-A2J1-01A","12:NUP107:68713808:+:12:LINC02389:64947316:+:rev","NUP107--LINC02389","ENSG00000111581","ENSG00000255693",11.0,1.0,1.0,1.0,0.477,0.00663716814159]
["TCGA_SARC","TCGA-DX-A2J4-01A","19:AXL:41238154:+:12:AC073530.1:67091628:-:fusion","AXL--AC073530.1","ENSG00000167601","ENSG00000257083",99.0,1.0,1.0,1.0,0.805150996358722,0.00536193029491]
["TCGA_SARC","TCGA-DX-A3LS-01A","12:APPL2:105207061:-:6:MAN1A1:119302103:-:fusion","APPL2--MAN1A1","ENSG00000136044","ENSG00000111885",8.0,1.0,1.0,1.0,0.285,0.0234042553191]
["TCGA_SARC","TCGA-DX-A3LS-01A","12:MDM2:68813628:+:3:CAND2:12871736:+:fusion","MDM2--CAND2","ENSG00000135679","ENSG00000144712",3.0,1.0,1.0,1.0,0.978,0.00425531914894]
["TCGA_SARC","TCGA-DX-A3LS-01A","12:RILPL2:123436082:-:6:SLC35F1:118266995:+:fusion","RILPL2--SLC35F1","ENSG00000150977","ENSG00000196376",3.0,1.0,1.0,1.0,0.195,0.0234042553191]
["TCGA_SARC","TCGA-DX-A3LS-01A","8:DDHD2:38253718:+:12:APPL2:105195627:-:fusion","DDHD2--APPL2","ENSG00000085788","ENSG00000136044",3.0,1.0,1.0,1.0,0.927,0.0063829787234]
["TCGA_SARC","TCGA-DX-A3LT-01A","11:CD81-AS1:2377586:-:11:CARS:3002600:-:rev","CD81-AS1--CARS","ENSG00000238184","ENSG00000110619",10.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_SARC","TCGA-DX-A3LW-01A","12:CS:56300160:-:12:AC078962.4:64599216:-:rev","CS--AC078962.4","ENSG00000062485","ENSG00000256670",68.0,1.0,1.0,1.0,0.725611567173122,0.00727272727273]
["TCGA_SARC","TCGA-DX-A3LY-01B","12:ANKRD52:56244353:-:12:AC020637.1:58812414:+:strandcross","ANKRD52--AC020637.1","ENSG00000139645","ENSG00000258231",10.0,1.0,1.0,1.0,0.906,0.0]
["TCGA_SARC","TCGA-DX-A3LY-01B","7:KLHDC10:130070809:+:9:PLGRKT:5361888:-:fusion","KLHDC10--PLGRKT","ENSG00000128607","ENSG00000107020",3.0,1.0,1.0,1.0,0.741,0.0]
["TCGA_SARC","TCGA-DX-A3M1-01A","12:CTDSP2:57846372:-:12:AC024909.1:89051267:-:rev","CTDSP2--AC024909.1","ENSG00000175215","ENSG00000257156",88.0,1.0,1.0,1.0,0.647146019811247,0.00265957446809]
["TCGA_SARC","TCGA-DX-A3M1-01A","17:MPRIP:17180088:+:17:AC002091.1:8976758:+:rev","MPRIP--AC002091.1","ENSG00000133030","ENSG00000265975",5.0,1.0,1.0,1.0,0.815,0.00265957446809]
["TCGA_SARC","TCGA-DX-A3M2-01A","9:FAM129B:127568820:-:9:AL157935.2:127874649:-:rev","FAM129B--AL157935.2","ENSG00000136830","ENSG00000106992",2.0,1.0,1.0,1.0,0.914,"NA"]
["TCGA_SARC","TCGA-DX-A3U5-01A","12:YEATS4:69360023:+:12:AC025569.1:70507895:+:reg","YEATS4--AC025569.1","ENSG00000127337","ENSG00000258168",61.0,1.0,1.0,1.0,0.93941861869753,0.0]
["TCGA_SARC","TCGA-DX-A3U5-01A","2:SOS1:38987473:-:4:AC104078.1:36273235:+:fusion","SOS1--AC104078.1","ENSG00000115904","ENSG00000247193",2.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_SARC","TCGA-DX-A3U6-01A","12:R3HDM2:57395749:-:12:AC084033.3:57931737:-:rev","R3HDM2--AC084033.3","ENSG00000179912","ENSG00000257698",11.0,1.0,1.0,1.0,0.885,"NA"]
["TCGA_SARC","TCGA-DX-A3UA-01A","4:AC131956.2:137734920:-:3:SLC7A14:170467377:-:fusion","AC131956.2--SLC7A14","ENSG00000250777","ENSG00000013293",6.0,1.0,1.0,1.0,0.417,0.00961538461538]
["TCGA_SARC","TCGA-DX-A3UC-01A","7:FKBP9:32957794:+:7:AC007285.1:30025387:+:rev","FKBP9--AC007285.1","ENSG00000122642","ENSG00000227014",3.0,1.0,1.0,1.0,0.938,0.00591715976331]
["TCGA_SARC","TCGA-DX-A48L-01A","2:ZFAND2B:219208348:+:3:LINC00969:195708134:+:fusion","ZFAND2B--LINC00969","ENSG00000158552","ENSG00000242086",6.0,1.0,1.0,1.0,0.924,0.00611620795107]
["TCGA_SARC","TCGA-DX-A48N-01A","12:TMTC2:82896646:+:12:AC073591.1:77390471:+:rev","TMTC2--AC073591.1","ENSG00000179104","ENSG00000257835",25.0,1.0,1.0,1.0,0.783995173090798,0.00763358778626]
["TCGA_SARC","TCGA-DX-A48N-01A","6:UTRN:144499427:+:1:LINC01350:185607401:-:fusion","UTRN--LINC01350","ENSG00000152818","ENSG00000228309",3.0,1.0,1.0,1.0,0.929,0.00508905852417]
["TCGA_SARC","TCGA-DX-A6B9-01A","18:FHOD3:36372744:+:18:AC023043.1:36180390:-:strandcross","FHOD3--AC023043.1","ENSG00000134775","ENSG00000260552",3.0,1.0,1.0,1.0,0.932,0.00789473684211]
["TCGA_SARC","TCGA-DX-A6BE-01A","12:AC011603.2:49009389:+:12:DIP2B:50640724:+:reg","AC011603.2--DIP2B","ENSG00000257913","ENSG00000066084",12.0,3.0,1.0,1.0,0.338,0.030888030888]
["TCGA_SARC","TCGA-DX-A6BF-01A","11:FADS1:61810751:-:11:AP005019.1:72587801:+:strandcross","FADS1--AP005019.1","ENSG00000149485","ENSG00000256633",5.0,1.0,1.0,1.0,0.572,0.00662251655629]
["TCGA_SARC","TCGA-DX-A6BG-01A","12:FRS2:69470530:+:12:RAB21:71769800:+:reg","FRS2--RAB21","ENSG00000166225","ENSG00000080371",3.0,2.0,1.0,1.0,0.872,0.0]
["TCGA_SARC","TCGA-DX-A6BG-01A","1:CREG1:167548002:-:12:AVIL:57799920:-:fusion","CREG1--AVIL","ENSG00000143162","ENSG00000135407",2.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_SARC","TCGA-DX-A6BG-01A","5:RICTOR:39074111:-:1:LINC01363:167195156:-:fusion","RICTOR--LINC01363","ENSG00000164327","ENSG00000231605",4.0,1.0,1.0,1.0,0.592,0.00242130750605]
["TCGA_SARC","TCGA-DX-A6BH-01A","6:NHSL1:138496219:-:6:UTRN:144403123:+:strandcross","NHSL1--UTRN","ENSG00000135540","ENSG00000152818",3.0,1.0,1.0,1.0,0.909,0.0]
["TCGA_SARC","TCGA-DX-A6BH-01A","7:AC078845.1:136329097:+:12:MYRFL:69958249:+:fusion","AC078845.1--MYRFL","ENSG00000232053","ENSG00000166268",2.0,1.0,1.0,1.0,0.861,0.0031847133758]
["TCGA_SARC","TCGA-DX-A6YR-01A","21:AP001347.1:14027597:+:21:SUMO3:44814104:-:strandcross","AP001347.1--SUMO3","ENSG00000224905","ENSG00000184900",7.0,1.0,1.0,1.0,0.619,0.00906344410876]
["TCGA_SARC","TCGA-DX-A6YS-01A","11:SOX6:16605901:-:5:AC034228.3:131959605:+:fusion","SOX6--AC034228.3","ENSG00000110693","ENSG00000234758",34.0,1.0,1.0,1.0,0.936500337931016,0.00198412698413]
["TCGA_SARC","TCGA-DX-A6YX-01A","8:NCOA2:70296744:-:8:ZFPM2-AS1:105927717:-:rev","NCOA2--ZFPM2-AS1","ENSG00000140396","ENSG00000251003",13.0,1.0,1.0,1.0,0.328,0.0234375]
["TCGA_SARC","TCGA-DX-A6YZ-01A","15:SMAD3:67099024:+:12:AC136188.1:73913957:+:fusion","SMAD3--AC136188.1","ENSG00000166949","ENSG00000257587",3.0,1.0,1.0,1.0,0.807,0.00289855072464]
["TCGA_SARC","TCGA-DX-A6Z0-01A","11:TSPAN18:44860469:+:X:AL034399.2:107934680:-:fusion","TSPAN18--AL034399.2","ENSG00000157570","ENSG00000236064",4.0,1.0,1.0,1.0,0.257,0.00847457627119]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:AC134511.1:67069050:-:12:SYT1:79285787:+:strandcross","AC134511.1--SYT1","ENSG00000256248","ENSG00000067715",9.0,1.0,1.0,1.0,0.169,0.0170454545455]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:NAV3:77325214:+:12:ACSS3:81134816:+:reg","NAV3--ACSS3","ENSG00000067798","ENSG00000111058",7.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_SARC","TCGA-DX-A7EI-01A","12:YEATS4:69370975:+:6:SLC25A27:46668709:+:fusion","YEATS4--SLC25A27","ENSG00000127337","ENSG00000153291",4.0,1.0,1.0,1.0,0.856,0.00378787878788]
["TCGA_SARC","TCGA-DX-A7EI-01A","1:SUCO:172570730:+:1:AL031275.1:168763616:-:strandcross","SUCO--AL031275.1","ENSG00000094975","ENSG00000235736",5.0,1.0,1.0,1.0,0.167,0.0208333333333]
["TCGA_SARC","TCGA-DX-A7ES-01A","12:AC090502.1:74157790:-:12:BTBD11:107543935:+:strandcross","AC090502.1--BTBD11","ENSG00000251138","ENSG00000151136",5.0,1.0,1.0,1.0,0.507,0.008356545961]
["TCGA_SARC","TCGA-DX-A7EU-01A","11:PAMR1:35474630:-:18:AP005229.1:11368652:-:fusion","PAMR1--AP005229.1","ENSG00000149090","ENSG00000267051",30.0,1.0,1.0,1.0,0.901069840425563,0.0046511627907]
["TCGA_SARC","TCGA-DX-A7EU-01A","19:CNN1:11546969:+:19:ILF3:10689179:+:rev","CNN1--ILF3","ENSG00000130176","ENSG00000129351",1.0,1.0,1.0,1.0,0.965,"NA"]
["TCGA_SARC","TCGA-DX-A8BK-01A","17:ABR:1031598:-:13:LINC01048:37484393:-:fusion","ABR--LINC01048","ENSG00000159842","ENSG00000230390",5.0,1.0,1.0,1.0,0.871,0.00404858299595]
["TCGA_SARC","TCGA-DX-A8BL-01A","19:MYO9B:17102557:+:19:AC011444.1:6012120:+:rev","MYO9B--AC011444.1","ENSG00000099331","ENSG00000266983",28.0,1.0,1.0,1.0,0.946594831852257,0.0]
["TCGA_SARC","TCGA-DX-A8BL-01A","6:NCOA7:125815404:+:6:STXBP5-AS1:146844712:-:strandcross","NCOA7--STXBP5-AS1","ENSG00000111912","ENSG00000233452",2.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_SARC","TCGA-DX-A8BM-01A","2:LANCL1:210476316:-:2:RPE:210017473:+:strandcross","LANCL1--RPE","ENSG00000115365","ENSG00000197713",2.0,1.0,1.0,1.0,0.946,0.00343642611684]
["TCGA_SARC","TCGA-DX-A8BR-01A","5:GFPT2:180338493:-:5:RACK1:181242345:-:rev","GFPT2--RACK1","ENSG00000131459","ENSG00000204628",2.0,1.0,2.0,1.0,0.987,"NA"]
["TCGA_SARC","TCGA-DX-A8BU-01A","19:ZNF100:21765694:-:19:ZNF793-AS1:37497592:-:rev","ZNF100--ZNF793-AS1","ENSG00000197020","ENSG00000266916",11.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_SARC","TCGA-DX-AATS-01A","15:FBN1:48508582:-:15:LINC02254:97427952:-:rev","FBN1--LINC02254","ENSG00000166147","ENSG00000259664",3.0,1.0,1.0,1.0,0.931,0.0128205128205]
["TCGA_SARC","TCGA-DX-AATS-01A","2:KLF7:207165467:-:2:CPS1:210616423:+:strandcross","KLF7--CPS1","ENSG00000118263","ENSG00000021826",3.0,1.0,1.0,1.0,0.553,0.0192307692308]
["TCGA_SARC","TCGA-DX-AB2F-01A","12:AC090001.1:95833017:-:12:CPM:68885885:-:reg","AC090001.1--CPM","ENSG00000258343","ENSG00000135678",5.0,1.0,1.0,1.0,0.316,0.0125]
["TCGA_SARC","TCGA-DX-AB2G-01A","12:CNOT2:70311017:+:12:R3HDM2:57395818:-:strandcross","CNOT2--R3HDM2","ENSG00000111596","ENSG00000179912",5.0,1.0,1.0,1.0,0.326,0.0133779264214]
["TCGA_SARC","TCGA-DX-AB2G-01A","12:SCN8A:51591359:+:12:LINC02381:54131990:+:reg","SCN8A--LINC02381","ENSG00000196876","ENSG00000250742",2.0,1.0,1.0,1.0,0.805,0.00334448160535]
["TCGA_SARC","TCGA-DX-AB2H-01A","12:LINC02384:68451367:-:12:MYRFL:69879028:+:strandcross","LINC02384--MYRFL","ENSG00000251301","ENSG00000166268",2.0,1.0,1.0,1.0,0.678,0.0255102040816]
["TCGA_SARC","TCGA-DX-AB2O-01A","1:TBX15:118931619:-:10:PRKG1-AS1:52313485:-:fusion","TBX15--PRKG1-AS1","ENSG00000092607","ENSG00000236671",3.0,1.0,1.0,1.0,0.965,0.0]
["TCGA_SARC","TCGA-DX-AB2O-01A","4:FSTL5:161587455:-:8:AC069113.2:27908990:+:fusion","FSTL5--AC069113.2","ENSG00000168843","ENSG00000253397",11.0,1.0,1.0,1.0,0.515,0.0154320987654]
["TCGA_SARC","TCGA-DX-AB2S-01A","14:TNFAIP2:103126692:+:17:C17orf58:67993235:-:fusion","TNFAIP2--C17orf58","ENSG00000185215","ENSG00000186665",3.0,1.0,1.0,1.0,0.715,0.00257731958763]
["TCGA_SARC","TCGA-DX-AB2V-01A","5:DAP:10748175:-:5:TRIO:14461019:+:strandcross","DAP--TRIO","ENSG00000112977","ENSG00000038382",4.0,1.0,1.0,1.0,0.984,0.0049504950495]
["TCGA_SARC","TCGA-DX-AB2V-01A","5:PRRC1:127517776:+:5:AC244517.2:141100755:-:strandcross","PRRC1--AC244517.2","ENSG00000164244","ENSG00000272154",12.0,1.0,1.0,1.0,0.953,0.00990099009901]
["TCGA_SARC","TCGA-DX-AB2X-01A","7:AC006001.2:66654626:+:7:CACNA2D1:82349649:-:strandcross","AC006001.2--CACNA2D1","ENSG00000226824","ENSG00000153956",3.0,1.0,1.0,1.0,0.788,0.0112994350282]
["TCGA_SARC","TCGA-DX-AB2Z-01A","12:SPATS2:49367587:+:12:AC011603.3:49147663:+:rev","SPATS2--AC011603.3","ENSG00000123352","ENSG00000258017",1.0,1.0,1.0,1.0,0.839,"NA"]
["TCGA_SARC","TCGA-DX-AB35-01A","12:HMGA2:65838569:+:12:AC078962.4:64599216:-:strandcross","HMGA2--AC078962.4","ENSG00000149948","ENSG00000256670",717.0,1.0,1.0,1.0,0.999999998848719,0.0]
["TCGA_SARC","TCGA-DX-AB35-01A","12:TMTC2:83061831:+:12:AC078923.1:75631314:-:strandcross","TMTC2--AC078923.1","ENSG00000179104","ENSG00000258077",37.0,1.0,1.0,1.0,0.943584903461081,0.0]
["TCGA_SARC","TCGA-DX-AB35-01A","17:LRRC75A-AS1:16441130:+:12:AC129102.1:20361834:-:fusion","LRRC75A-AS1--AC129102.1","ENSG00000175061","ENSG00000256879",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_SARC","TCGA-DX-AB36-01A","12:ELK3:96223773:+:1:LINC01358:59103512:+:fusion","ELK3--LINC01358","ENSG00000111145","ENSG00000237352",269.0,1.0,1.0,1.0,0.885116384713028,0.0276243093923]
["TCGA_SARC","TCGA-DX-AB36-01A","12:MDM2:68816945:+:2:STRADB:201480032:+:fusion","MDM2--STRADB","ENSG00000135679","ENSG00000082146",3.0,1.0,1.0,1.0,0.836,0.0276243093923]
["TCGA_SARC","TCGA-DX-AB36-01A","1:SPATA6:48471958:-:1:AL161740.1:56987427:+:strandcross","SPATA6--AL161740.1","ENSG00000132122","ENSG00000236341",4.0,1.0,1.0,1.0,0.928,0.0220994475138]
["TCGA_SARC","TCGA-DX-AB3A-01A","12:FRS2:69532056:+:12:LINC02231:64957857:-:strandcross","FRS2--LINC02231","ENSG00000166225","ENSG00000248995",4.0,1.0,1.0,1.0,0.955,0.0]
["TCGA_SARC","TCGA-FX-A2QS-01A","11:AP002986.1:130369042:+:5:CTNND2:11364890:-:fusion","AP002986.1--CTNND2","ENSG00000175773","ENSG00000169862",2.0,1.0,1.0,1.0,0.171,0.0457142857143]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:CNOT2:70243480:+:X:GPR50:151179771:+:fusion","CNOT2--GPR50","ENSG00000111596","ENSG00000102195",23.0,1.0,1.0,1.0,0.805763502392593,0.00571428571429]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:HMGA2:65951415:+:12:AC087798.1:84294310:+:reg","HMGA2--AC087798.1","ENSG00000149948","ENSG00000257729",666.0,1.0,1.0,1.0,0.656629292696605,0.0114285714286]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:MDM2:68824651:+:2:KIAA2012:202154673:+:fusion","MDM2--KIAA2012","ENSG00000135679","ENSG00000182329",3.0,1.0,1.0,1.0,0.751,0.00857142857143]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:NAV3:77325214:+:7:MIOS:7596257:+:fusion","NAV3--MIOS","ENSG00000067798","ENSG00000164654",2.0,1.0,1.0,1.0,0.754,0.00857142857143]
["TCGA_SARC","TCGA-FX-A2QS-01A","12:SCAF11:45990353:-:12:PTPRR:70662605:-:rev","SCAF11--PTPRR","ENSG00000139218","ENSG00000153233",3.0,1.0,1.0,1.0,0.805,0.00571428571429]
["TCGA_SARC","TCGA-FX-A2QS-01A","19:ZNF528:52406033:+:5:RANBP3L:36271311:-:fusion","ZNF528--RANBP3L","ENSG00000167555","ENSG00000164188",11.0,1.0,1.0,1.0,0.339,0.00353356890459]
["TCGA_SARC","TCGA-FX-A2QS-01A","2:UBXN4:135776351:+:12:AC136188.1:73906940:+:fusion","UBXN4--AC136188.1","ENSG00000144224","ENSG00000257587",4.0,1.0,1.0,1.0,0.179,0.0457142857143]
["TCGA_SARC","TCGA-FX-A2QS-01A","5:LINC01951:174976449:-:7:SKAP2:26739964:-:fusion","LINC01951--SKAP2","ENSG00000204754","ENSG00000005020",8.0,1.0,1.0,1.0,0.546,0.0142857142857]
["TCGA_SARC","TCGA-FX-A3NK-01A","12:AC073571.1:78056185:-:12:OSBPL8:76487618:-:reg","AC073571.1--OSBPL8","ENSG00000258225","ENSG00000091039",7.0,1.0,1.0,1.0,0.535,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3NK-01A","12:CTDSP2:57827552:-:12:AC024909.1:89123075:-:rev","CTDSP2--AC024909.1","ENSG00000175215","ENSG00000257156",48.0,1.0,1.0,1.0,0.403021834476167,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3NK-01A","12:NAV3:77325214:+:12:AC020637.1:58805941:+:rev","NAV3--AC020637.1","ENSG00000067798","ENSG00000258231",16.0,1.0,1.0,1.0,0.875915839936156,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3NK-01A","3:AC092902.2:125914420:-:6:SESN1:108988687:-:fusion","AC092902.2--SESN1","ENSG00000241288","ENSG00000080546",6.0,1.0,1.0,1.0,0.975,0.00226244343891]
["TCGA_SARC","TCGA-FX-A3NK-01A","8:AC015522.1:83912835:+:8:COX6C:99892052:-:strandcross","AC015522.1--COX6C","ENSG00000254202","ENSG00000164919",13.0,1.0,1.0,1.0,0.336,0.00678733031674]
["TCGA_SARC","TCGA-FX-A3RE-01A","3:TRA2B:185937825:-:3:LINC00879:95138186:+:strandcross","TRA2B--LINC00879","ENSG00000136527","ENSG00000239589",8.0,1.0,1.0,1.0,0.361,0.0247933884298]
["TCGA_SARC","TCGA-FX-A3TO-01A","12:FAM222A-AS1:109773297:-:12:C12orf75:105365807:+:strandcross","FAM222A-AS1--C12orf75","ENSG00000255650","ENSG00000235162",5.0,1.0,1.0,1.0,0.374,0.0106007067138]
["TCGA_SARC","TCGA-FX-A3TO-01A","15:CD276:73684460:+:15:IQCH-AS1:67519102:-:strandcross","CD276--IQCH-AS1","ENSG00000103855","ENSG00000259673",4.0,1.0,1.0,1.0,0.242,0.0141342756184]
["TCGA_SARC","TCGA-FX-A3TO-01A","17:DHRS7B:21126991:+:15:ANKRD34C-AS1:79192102:-:fusion","DHRS7B--ANKRD34C-AS1","ENSG00000109016","ENSG00000259234",3.0,1.0,1.0,1.0,0.981,0.00353356890459]
["TCGA_SARC","TCGA-FX-A3TO-01A","5:ZCCHC9:81301698:+:12:ACVRL1:51915225:+:fusion","ZCCHC9--ACVRL1","ENSG00000131732","ENSG00000139567",2.0,1.0,1.0,1.0,0.637,0.00706713780919]
["TCGA_SARC","TCGA-FX-A48G-01A","19:SMARCA4:11041560:+:22:TTC28-AS1:27989882:+:fusion","SMARCA4--TTC28-AS1","ENSG00000127616","ENSG00000235954",7.0,1.0,1.0,1.0,0.487,0.00392156862745]
["TCGA_SARC","TCGA-HB-A2OT-01A","4:EVC2:5697593:-:9:AL589642.2:32643743:-:fusion","EVC2--AL589642.2","ENSG00000173040","ENSG00000230516",7.0,1.0,1.0,1.0,0.935,0.00306748466258]
["TCGA_SARC","TCGA-HB-A3YV-01A","4:LINC01088:79086262:+:4:SNCA:89729277:-:strandcross","LINC01088--SNCA","ENSG00000249307","ENSG00000145335",6.0,1.0,1.0,1.0,0.99,0.0]
["TCGA_SARC","TCGA-HB-A3YV-01A","6:ASCC3:100540163:-:6:AL591397.1:137951141:+:strandcross","ASCC3--AL591397.1","ENSG00000112249","ENSG00000229922",5.0,1.0,1.0,1.0,0.79,0.00255102040816]
["TCGA_SARC","TCGA-HB-A3YV-01A","6:PNISR:99425215:-:6:PLEKHG1:150733584:+:strandcross","PNISR--PLEKHG1","ENSG00000132424","ENSG00000120278",2.0,1.0,1.0,1.0,0.924,0.00255102040816]
["TCGA_SARC","TCGA-HB-A3YV-01A","11:POLD3:74625573:+:11:MRPL48:73825708:+:rev","POLD3--MRPL48","ENSG00000077514","ENSG00000175581",2.0,1.0,1.0,1.0,0.937,"NA"]
["TCGA_SARC","TCGA-HB-A43Z-01A","12:AC023055.1:55815887:-:12:MMP19:55842438:-:rev","AC023055.1--MMP19","ENSG00000257390","ENSG00000123342",2.0,1.0,1.0,1.0,0.966,"NA"]
["TCGA_SARC","TCGA-HS-A5N8-01A","1:EIF4G3:21050866:-:1:USP48:21724095:-:rev","EIF4G3--USP48","ENSG00000075151","ENSG00000090686",2.0,1.0,1.0,1.0,0.98,"NA"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","12:TRHDE:72542356:+:12:MDM2:68839274:+:rev","TRHDE--MDM2","ENSG00000072657","ENSG00000135679",1.0,1.0,1.0,1.0,0.566,0.0056657223796]
["TCGA_SARC","TCGA-IF-A3RQ-01A","5:FNIP1:131670463:-:5:NREP-AS1:111940037:+:strandcross","FNIP1--NREP-AS1","ENSG00000217128","ENSG00000250095",8.0,1.0,1.0,1.0,0.306,0.0198300283286]
["TCGA_SARC","TCGA-IF-A3RQ-01A","5:FNIP1:131670463:-:5:NREP-AS1:112017140:+:strandcross","FNIP1--NREP-AS1","ENSG00000217128","ENSG00000250095",2.0,1.0,1.0,1.0,0.21,0.0226628895184]
["TCGA_SARC","TCGA-IF-A3RQ-01A","9:PTPRD:8857638:-:6:AL357060.2:137730597:-:fusion","PTPRD--AL357060.2","ENSG00000153707","ENSG00000234956",3.0,1.0,1.0,1.0,0.622,0.0056657223796]
["TCGA_SARC","TCGA-IS-A3K7-01A","12:AC145422.1:121581263:+:12:TCTN1:110647196:+:rev","AC145422.1--TCTN1","ENSG00000256742","ENSG00000204852",4.0,1.0,1.0,1.0,1.0,0.0]
["TCGA_SARC","TCGA-IW-A3M4-01A","19:FTL:48966406:+:17:ACTG1:81511626:-:fusion","FTL--ACTG1","ENSG00000087086","ENSG00000184009",2.0,1.0,1.0,1.0,0.798,0.00649350649351]
["TCGA_SARC","TCGA-JV-A5VE-01A","4:ANK2:113360897:+:4:AC139718.2:111837454:+:rev","ANK2--AC139718.2","ENSG00000145362","ENSG00000250855",14.0,1.0,1.0,1.0,0.52,0.00656814449918]
["TCGA_SARC","TCGA-K1-A42X-01A","12:ANKRD13A:109999784:+:12:TCHP:109980905:+:rev","ANKRD13A--TCHP","ENSG00000076513","ENSG00000139437",4.0,1.0,2.0,1.0,0.796,"NA"]
["TCGA_SARC","TCGA-K1-A6RT-01A","17:CACNB1:39194884:-:17:MED24:40031620:-:rev","CACNB1--MED24","ENSG00000067191","ENSG00000008838",2.0,1.0,1.0,1.0,0.496,"NA"]
["TCGA_SARC","TCGA-K1-A6RU-01A","9:SVEP1:110579013:-:9:GAS1RR:86950867:+:strandcross","SVEP1--GAS1RR","ENSG00000165124","ENSG00000226237",5.0,1.0,1.0,1.0,0.476,0.00364298724954]
["TCGA_SARC","TCGA-KD-A5QS-01A","3:SUCLG2:67609455:-:3:AC025566.1:148226377:+:strandcross","SUCLG2--AC025566.1","ENSG00000172340","ENSG00000244650",16.0,1.0,1.0,1.0,0.84224609087551,0.00497512437811]
["TCGA_SARC","TCGA-KF-A41W-01A","13:TMCO3:113539507:+:13:GRTP1:113326091:-:strandcross","TMCO3--GRTP1","ENSG00000150403","ENSG00000139835",3.0,1.0,1.0,1.0,0.507,0.00847457627119]
["TCGA_SARC","TCGA-MB-A8JL-01A","12:TMEM117:43944342:+:12:AC090673.1:65866954:-:strandcross","TMEM117--AC090673.1","ENSG00000139173","ENSG00000197301",6.0,1.0,1.0,1.0,0.865,0.00280112044818]
["TCGA_SARC","TCGA-N1-A6IA-01A","2:SERPINE2:224039099:-:X:NLGN4X:6151771:-:fusion","SERPINE2--NLGN4X","ENSG00000135919","ENSG00000146938",2.0,1.0,1.0,1.0,0.55,0.014880952381]
["TCGA_SARC","TCGA-PC-A5DM-01A","17:RNF213:80263778:+:17:DNAH17-AS1:78494014:+:rev","RNF213--DNAH17-AS1","ENSG00000173821","ENSG00000267432",7.0,1.0,1.0,1.0,0.288,0.0201342281879]
["TCGA_SARC","TCGA-PC-A5DN-01A","12:ACADS:120727189:+:6:AL022097.1:5695008:-:fusion","ACADS--AL022097.1","ENSG00000122971","ENSG00000270174",3.0,1.0,1.0,1.0,0.446,0.0156862745098]
["TCGA_SARC","TCGA-PC-A5DN-01A","12:CPSF6:69262562:+:6:PRIM2:57434971:+:fusion","CPSF6--PRIM2","ENSG00000111605","ENSG00000146143",3.0,1.0,1.0,1.0,0.154,0.0392156862745]
["TCGA_SARC","TCGA-PC-A5DP-01A","16:NTAN1:15055891:-:16:MYH11:15727054:-:rev","NTAN1--MYH11","ENSG00000157045","ENSG00000133392",2.0,1.0,1.0,1.0,0.726,"NA"]
["TCGA_SARC","TCGA-QC-AA9N-01A","12:RIC8B:106784044:+:12:LINC02405:127032066:-:strandcross","RIC8B--LINC02405","ENSG00000111785","ENSG00000249345",2.0,1.0,1.0,1.0,0.739,0.00958466453674]
["TCGA_SARC","TCGA-QQ-A5VA-01A","15:DENND4A:65690415:-:15:AC087482.1:66987647:-:rev","DENND4A--AC087482.1","ENSG00000174485","ENSG00000259347",3.0,1.0,1.0,1.0,0.169,0.0503144654088]
["TCGA_SARC","TCGA-QQ-A5VA-01A","8:TRAPPC9:140360050:-:3:AC068633.1:118508692:-:fusion","TRAPPC9--AC068633.1","ENSG00000167632","ENSG00000243276",2.0,1.0,1.0,1.0,0.986,0.0]
["TCGA_SARC","TCGA-QQ-A5VB-01A","2:AC098820.1:216498607:-:2:FN1:215379317:-:reg","AC098820.1--FN1","ENSG00000232485","ENSG00000115414",4.0,1.0,1.0,1.0,0.828,0.00581395348837]
["TCGA_SARC","TCGA-QQ-A8VH-01A","14:AL133372.2:30296975:-:14:LINC02281:28824947:-:reg","AL133372.2--LINC02281","ENSG00000248975","ENSG00000257748",3.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_SARC","TCGA-RN-AAAQ-01A","2:PEX13:61045851:+:2:LINC01829:67205563:-:strandcross","PEX13--LINC01829","ENSG00000162928","ENSG00000236780",3.0,1.0,1.0,1.0,0.85,0.0]
["TCGA_SARC","TCGA-SG-A6Z7-01A","1:DNM3:172131288:+:12:AC136188.1:73906940:+:fusion","DNM3--AC136188.1","ENSG00000197959","ENSG00000257587",18.0,1.0,1.0,1.0,0.68903864870076,0.0157068062827]
["TCGA_SARC","TCGA-SG-A849-01A","14:CALM1:90403968:+:3:LINC01986:23968:+:fusion","CALM1--LINC01986","ENSG00000198668","ENSG00000223587",2.0,1.0,1.0,1.0,0.91,0.00515463917526]
["TCGA_SARC","TCGA-SI-A71Q-01A","7:SDHAF3:97117897:+:7:LAMB1:107955630:-:strandcross","SDHAF3--LAMB1","ENSG00000196636","ENSG00000091136",2.0,1.0,1.0,1.0,0.937,0.00757575757576]
["TCGA_SARC","TCGA-VT-A80G-01A","6:SYNJ2:158017290:+:14:LINC02310:51393049:-:fusion","SYNJ2--LINC02310","ENSG00000078269","ENSG00000258808",2.0,1.0,1.0,1.0,0.367,0.0272727272727]
["TCGA_SARC","TCGA-VT-A80J-01A","10:GBF1:102260116:+:10:LBX1-AS1:101232254:+:rev","GBF1--LBX1-AS1","ENSG00000107862","ENSG00000227128",3.0,2.0,2.0,2.0,0.67,0.0078125]
["TCGA_SARC","TCGA-WK-A8XO-01A","12:NTN4:95713212:-:12:LINC02426:81954248:+:strandcross","NTN4--LINC02426","ENSG00000074527","ENSG00000257747",41.0,1.0,1.0,1.0,0.9499495917476,0.0]
["TCGA_SARC","TCGA-WK-A8Y0-01A","13:TUBGCP3:112558196:-:13:LINC01076:25193213:-:reg","TUBGCP3--LINC01076","ENSG00000126216","ENSG00000225105",17.0,1.0,1.0,1.0,0.851018274324405,0.0034965034965]
["TCGA_SARC","TCGA-WK-A8Y0-01A","2:RANBP2:108719678:+:2:LINC01885:107528864:-:strandcross","RANBP2--LINC01885","ENSG00000153201","ENSG00000237880",3.0,1.0,1.0,1.0,0.18,0.0384615384615]
["TCGA_SARC","TCGA-WP-A9GB-01A","5:FBN2:128311300:-:15:AC104041.1:81662138:-:fusion","FBN2--AC104041.1","ENSG00000138829","ENSG00000259692",2.0,1.0,1.0,1.0,0.778,0.00347222222222]
["TCGA_SARC","TCGA-X6-A7WC-01A","2:USP37:218534609:-:X:DHRSX:2291603:-:fusion","USP37--DHRSX","ENSG00000135913","ENSG00000169084",3.0,1.0,1.0,1.0,0.89,0.00729927007299]
["TCGA_SARC","TCGA-X6-A8C3-01A","11:TEAD1:12675561:+:11:AC107973.1:29881482:+:reg","TEAD1--AC107973.1","ENSG00000187079","ENSG00000254734",12.0,1.0,1.0,1.0,0.512,0.0183486238532]
["TCGA_SARC","TCGA-X6-A8C6-01A","14:NUMB:73292734:-:3:AC128685.1:163228698:+:fusion","NUMB--AC128685.1","ENSG00000133961","ENSG00000241168",4.0,1.0,1.0,1.0,0.874,0.00638977635783]
["TCGA_SARC","TCGA-X6-A8C6-01A","9:ABL1:130863035:+:9:LINC01505:106664753:+:rev","ABL1--LINC01505","ENSG00000097007","ENSG00000234323",40.0,1.0,1.0,1.0,0.73604624448194,0.00958466453674]
["TCGA_SARC","TCGA-X6-A8C6-01A","X:LINC00630:102827144:+:2:TOGARAM2:28994725:+:fusion","LINC00630--TOGARAM2","ENSG00000223546","ENSG00000189350",5.0,1.0,1.0,1.0,0.883,0.00638977635783]
["TCGA_SARC","TCGA-X9-A973-01A","19:EIF3K:38626102:+:7:ELMO1:37233194:-:fusion","EIF3K--ELMO1","ENSG00000178982","ENSG00000155849",3.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_SKCM","TCGA-BF-A3DJ-01A","2:XRCC5:216162048:+:2:AC122136.1:215870264:+:rev","XRCC5--AC122136.1","ENSG00000079246","ENSG00000227824",2.0,1.0,1.0,1.0,0.692,"NA"]
["TCGA_SKCM","TCGA-BF-A5EQ-01A","22:CERK:46711086:-:22:FBXO7:32483897:+:strandcross","CERK--FBXO7","ENSG00000100422","ENSG00000100225",2.0,1.0,1.0,1.0,0.772,0.00600600600601]
["TCGA_SKCM","TCGA-BF-A5EQ-01A","22:EP300:41093098:+:15:MIR4713HG:51277983:+:fusion","EP300--MIR4713HG","ENSG00000100393","ENSG00000259240",9.0,1.0,1.0,1.0,0.237,0.024024024024]
["TCGA_SKCM","TCGA-BF-AAP4-01A","1:EPB41:28914768:+:1:PHACTR4:28480451:+:rev","EPB41--PHACTR4","ENSG00000159023","ENSG00000204138",3.0,1.0,1.0,1.0,0.807,"NA"]
["TCGA_SKCM","TCGA-D3-A1Q3-06A","5:ERGIC1:172834433:+:5:G3BP1:151786572:+:rev","ERGIC1--G3BP1","ENSG00000113719","ENSG00000145907",2.0,1.0,1.0,1.0,0.656,0.00308641975309]
["TCGA_SKCM","TCGA-D3-A1Q9-06A","20:NDUFAF5:13808902:+:11:AP000793.1:82604101:-:fusion","NDUFAF5--AP000793.1","ENSG00000101247","ENSG00000255246",22.0,1.0,1.0,1.0,0.78086453073532,0.00537634408602]
["TCGA_SKCM","TCGA-D3-A1QB-06A","1:NUCKS1:205749957:-:1:RAB29:205771653:-:rev","NUCKS1--RAB29","ENSG00000069275","ENSG00000117280",16.0,1.0,1.0,1.0,0.863504033930346,"NA"]
["TCGA_SKCM","TCGA-D3-A2J7-06A","5:CCNB1:69175537:+:5:SLC30A5:69121694:+:rev","CCNB1--SLC30A5","ENSG00000134057","ENSG00000145740",1.0,1.0,1.0,1.0,0.968,"NA"]
["TCGA_SKCM","TCGA-D3-A2JB-06A","19:NFKBIB:38900211:+:19:EIF3K:38620337:+:rev","NFKBIB--EIF3K","ENSG00000104825","ENSG00000178982",2.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_SKCM","TCGA-D3-A2JE-06A","2:PCBP1-AS1:70085547:-:2:C2orf42:70169661:-:rev","PCBP1-AS1--C2orf42","ENSG00000179818","ENSG00000115998",2.0,1.0,1.0,1.0,0.84,"NA"]
["TCGA_SKCM","TCGA-D3-A2JG-06A","22:POLR2F:37986312:+:22:MYH9:36316669:-:strandcross","POLR2F--MYH9","ENSG00000100142","ENSG00000100345",2.0,1.0,1.0,1.0,0.987,0.0028818443804]
["TCGA_SKCM","TCGA-D3-A3BZ-06A","12:MED13L:116237468:-:8:LINC00967:66196725:+:fusion","MED13L--LINC00967","ENSG00000123066","ENSG00000253138",204.0,1.0,2.0,1.0,0.998698707525182,0.0]
["TCGA_SKCM","TCGA-D3-A3BZ-06A","3:ROBO2:75937602:+:3:LINC02018:75443508:+:rev","ROBO2--LINC02018","ENSG00000185008","ENSG00000272690",1.0,1.0,1.0,1.0,0.863,"NA"]
["TCGA_SKCM","TCGA-D3-A3C7-06A","1:ITGA10:145906394:-:17:ETV4:43530181:-:fusion","ITGA10--ETV4","ENSG00000143127","ENSG00000175832",2.0,1.0,1.0,1.0,0.991,0.0]
["TCGA_SKCM","TCGA-D3-A3CC-06A","5:PARP8:50668125:+:1:AL627309.1:92240:-:fusion","PARP8--AL627309.1","ENSG00000151883","ENSG00000238009",5.0,1.0,1.0,1.0,0.2,0.0364077669903]
["TCGA_SKCM","TCGA-D3-A3CE-06A","12:AC073896.1:56314851:-:2:IGKC:88857683:-:fusion","AC073896.1--IGKC","ENSG00000144785","ENSG00000211592",2.0,1.0,1.0,1.0,0.975,0.00233644859813]
["TCGA_SKCM","TCGA-D3-A3CF-06A","2:GACAT3:16074373:+:5:CLPTM1L:1325816:-:fusion","GACAT3--CLPTM1L","ENSG00000236289","ENSG00000049656",2.0,1.0,1.0,1.0,0.748,0.00900900900901]
["TCGA_SKCM","TCGA-D3-A3CF-06A","7:MAD1L1:2149152:-:7:GNA12:2733501:-:rev","MAD1L1--GNA12","ENSG00000002822","ENSG00000146535",2.0,1.0,2.0,1.0,0.576,"NA"]
["TCGA_SKCM","TCGA-D3-A51N-06A","5:FAM172A:94050731:-:5:AC104123.1:96379566:+:strandcross","FAM172A--AC104123.1","ENSG00000113391","ENSG00000251314",2.0,1.0,1.0,1.0,0.883,0.0]
["TCGA_SKCM","TCGA-D3-A5GR-06A","13:LAMP1:113319656:+:13:AL355390.2:74551180:+:rev","LAMP1--AL355390.2","ENSG00000185896","ENSG00000281167",5.0,1.0,1.0,1.0,0.349,0.0098231827112]
["TCGA_SKCM","TCGA-D3-A8GC-06A","17:STAT3:42346569:-:17:CAVIN1:42405388:-:rev","STAT3--CAVIN1","ENSG00000168610","ENSG00000177469",18.0,1.0,1.0,1.0,0.863304267266273,"NA"]
["TCGA_SKCM","TCGA-D9-A1X3-06A","12:FRS2:69470530:+:12:RAB21:71785531:+:reg","FRS2--RAB21","ENSG00000166225","ENSG00000080371",2.0,1.0,1.0,1.0,0.276,0.0098643649815]
["TCGA_SKCM","TCGA-D9-A4Z3-01A","4:TMA16:163507145:+:4:MARCH1:163700863:-:strandcross","TMA16--MARCH1","ENSG00000198498","ENSG00000145416",4.0,1.0,1.0,1.0,0.891,0.00261096605744]
["TCGA_SKCM","TCGA-D9-A6E9-06A","12:PRICKLE1:42589465:-:12:AC084033.3:57935553:-:rev","PRICKLE1--AC084033.3","ENSG00000139174","ENSG00000257698",7.0,1.0,1.0,1.0,0.651,0.00749063670412]
["TCGA_SKCM","TCGA-DA-A1HW-06A","15:VPS13C:61927091:-:15:LINC00593:69840746:+:strandcross","VPS13C--LINC00593","ENSG00000129003","ENSG00000259703",10.0,1.0,1.0,1.0,0.365,0.0125]
["TCGA_SKCM","TCGA-DA-A1I2-06A","17:MYO1D:32605087:-:1:AL031316.1:209663061:-:fusion","MYO1D--AL031316.1","ENSG00000176658","ENSG00000227591",13.0,1.0,1.0,1.0,0.562,0.00469483568075]
["TCGA_SKCM","TCGA-DA-A1I8-06A","20:EDN3:59300864:+:20:GNAS:58895612:+:rev","EDN3--GNAS","ENSG00000124205","ENSG00000087460",2.0,1.0,1.0,1.0,0.635,"NA"]
["TCGA_SKCM","TCGA-DA-A1IA-06A","1:PIGK:77122275:-:1:AL390115.1:166335328:+:strandcross","PIGK--AL390115.1","ENSG00000142892","ENSG00000229588",4.0,1.0,1.0,1.0,0.85,0.00218102508179]
["TCGA_SKCM","TCGA-DA-A1IA-06A","1:EIF3I:32228816:+:1:TXLNA:32187954:+:rev","EIF3I--TXLNA","ENSG00000084623","ENSG00000084652",2.0,1.0,1.0,1.0,0.82,"NA"]
["TCGA_SKCM","TCGA-DA-A3F5-06A","15:SIN3A:75430187:-:15:LOXL1-AS1:73909850:-:reg","SIN3A--LOXL1-AS1","ENSG00000169375","ENSG00000261801",3.0,1.0,1.0,1.0,0.199,0.016317016317]
["TCGA_SKCM","TCGA-DA-A95Z-06A","11:TYR:89191418:+:22:MN1:27751096:-:fusion","TYR--MN1","ENSG00000077498","ENSG00000169184",3.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_SKCM","TCGA-EB-A24C-01A","3:ATXN7:63913225:+:3:LINC01811:34562776:+:rev","ATXN7--LINC01811","ENSG00000163635","ENSG00000226320",2.0,1.0,1.0,1.0,0.759,0.00295857988166]
["TCGA_SKCM","TCGA-EB-A3XC-01A","11:TYR:89227970:+:11:GRM5-AS1:88511751:+:rev","TYR--GRM5-AS1","ENSG00000077498","ENSG00000255082",46.0,1.0,1.0,1.0,0.93070643418557,"NA"]
["TCGA_SKCM","TCGA-EB-A42Y-01A","5:WDR70:37697754:+:5:LINC01194:12759359:+:rev","WDR70--LINC01194","ENSG00000082068","ENSG00000248131",15.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SKCM","TCGA-EB-A44Q-06A","6:AL035701.1:46102540:-:12:MYRFL:69855280:+:fusion","AL035701.1--MYRFL","ENSG00000231769","ENSG00000258052",3.0,1.0,1.0,1.0,0.202,0.0123674911661]
["TCGA_SKCM","TCGA-EB-A4IQ-01A","12:MON2:62467318:+:12:SRGAP1:64016950:+:reg","MON2--SRGAP1","ENSG00000061987","ENSG00000196935",4.0,1.0,1.0,1.0,0.871,0.00744416873449]
["TCGA_SKCM","TCGA-EB-A5KH-06A","18:PIK3C3:41957758:+:18:AC048380.1:48673676:-:strandcross","PIK3C3--AC048380.1","ENSG00000078142","ENSG00000267762",22.0,1.0,1.0,1.0,0.839638238532102,0.00529100529101]
["TCGA_SKCM","TCGA-EB-A5SH-06A","1:SDHB:17044761:-:1:AL445490.1:27702801:+:strandcross","SDHB--AL445490.1","ENSG00000117118","ENSG00000225886",72.0,1.0,1.0,1.0,0.522529160367395,0.0118577075099]
["TCGA_SKCM","TCGA-EB-A5UM-01A","20:COMMD7:32727893:-:20:MIR646HG:60527387:+:strandcross","COMMD7--MIR646HG","ENSG00000149600","ENSG00000228340",1.0,1.0,1.0,1.0,0.88,0.0]
["TCGA_SKCM","TCGA-EB-A82C-01A","1:AL139220.2:44051494:+:1:FABP3:31369557:-:strandcross","AL139220.2--FABP3","ENSG00000230615","ENSG00000121769",8.0,1.0,1.0,1.0,0.977,0.00404858299595]
["TCGA_SKCM","TCGA-EE-A17X-06A","9:CTSL:87726253:+:9:PAEP:135565410:+:reg","CTSL--PAEP","ENSG00000135047","ENSG00000122133",2.0,1.0,1.0,1.0,0.749,0.00737100737101]
["TCGA_SKCM","TCGA-EE-A17Z-06A","3:GPD1L:32140366:+:3:ZCWPW2:28413056:+:rev","GPD1L--ZCWPW2","ENSG00000152642","ENSG00000206559",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_SKCM","TCGA-EE-A184-06A","22:LARGE1:33564848:-:5:CDH18-AS1:20331356:+:fusion","LARGE1--CDH18-AS1","ENSG00000133424","ENSG00000249854",8.0,1.0,1.0,1.0,0.936,0.00268817204301]
["TCGA_SKCM","TCGA-EE-A20C-06A","16:ACSM2B:20575422:-:6:TFB1M:155260568:-:fusion","ACSM2B--TFB1M","ENSG00000066813","ENSG00000029639",9.0,2.0,1.0,1.0,0.318,0.0228136882129]
["TCGA_SKCM","TCGA-EE-A20H-06A","5:PARP8:50741951:+:12:AC068888.1:53046061:-:fusion","PARP8--AC068888.1","ENSG00000151883","ENSG00000257337",2.0,1.0,1.0,1.0,0.726,0.00652173913043]
["TCGA_SKCM","TCGA-EE-A20I-06A","5:PCDHGA4:141357621:+:10:JMJD1C:63264764:-:fusion","PCDHGA4--JMJD1C","ENSG00000262576","ENSG00000171988",3.0,1.0,1.0,1.0,0.221,0.0249433106576]
["TCGA_SKCM","TCGA-EE-A29C-06A","17:CDK12:39463117:+:9:SPATA31A1:39357132:+:fusion","CDK12--SPATA31A1","ENSG00000167258","ENSG00000204849",9.0,1.0,1.0,1.0,0.422,0.00485436893204]
["TCGA_SKCM","TCGA-EE-A29L-06A","9:UBAP2:33956079:-:22:LINC01422:26906578:+:fusion","UBAP2--LINC01422","ENSG00000137073","ENSG00000235271",4.0,1.0,1.0,1.0,0.343,0.00961538461538]
["TCGA_SKCM","TCGA-EE-A29P-06A","14:ITPK1:92993880:-:14:AL391261.2:65989743:-:reg","ITPK1--AL391261.2","ENSG00000100605","ENSG00000258847",2.0,1.0,1.0,1.0,0.837,0.00261780104712]
["TCGA_SKCM","TCGA-EE-A2A1-06A","15:B2M:44711613:+:4:CTBP1:1241519:-:fusion","B2M--CTBP1","ENSG00000166710","ENSG00000159692",2.0,2.0,1.0,1.0,0.799,0.00441176470588]
["TCGA_SKCM","TCGA-EE-A2GB-06A","10:ENTPD1-AS1:96089266:-:10:LIPM:88817825:+:strandcross","ENTPD1-AS1--LIPM","ENSG00000226688","ENSG00000173239",11.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_SKCM","TCGA-EE-A2GM-06B","9:FKBP15:113221191:-:9:MLANA:5906885:+:strandcross","FKBP15--MLANA","ENSG00000119321","ENSG00000120215",1.0,1.0,1.0,1.0,0.764,0.00655021834061]
["TCGA_SKCM","TCGA-EE-A2M6-06A","8:PVT1:127794734:+:8:LINC00824:128561126:-:strandcross","PVT1--LINC00824","ENSG00000249859","ENSG00000254275",104.0,2.0,1.0,1.0,0.984853453812559,0.0]
["TCGA_SKCM","TCGA-EE-A2M7-06A","12:CCDC91:28190641:+:12:MRPS35:27724047:+:rev","CCDC91--MRPS35","ENSG00000123106","ENSG00000061794",3.0,1.0,1.0,1.0,1.0,"NA"]
["TCGA_SKCM","TCGA-EE-A2ME-06A","4:ADGRA3:22435311:-:4:AC226119.1:3924267:-:reg","ADGRA3--AC226119.1","ENSG00000152990","ENSG00000253917",6.0,1.0,1.0,1.0,0.49,0.0126903553299]
["TCGA_SKCM","TCGA-EE-A2MH-06A","20:NFATC2:51516784:-:8:CASC9:75224358:-:fusion","NFATC2--CASC9","ENSG00000101096","ENSG00000249395",4.0,1.0,1.0,1.0,0.543,0.0131291028446]
["TCGA_SKCM","TCGA-EE-A2ML-06A","11:NAP1L4:2969803:-:11:AP006621.1:823863:-:reg","NAP1L4--AP006621.1","ENSG00000205531","ENSG00000255108",3.0,1.0,1.0,1.0,0.82,0.00591715976331]
["TCGA_SKCM","TCGA-EE-A2MQ-06A","11:TOLLIP:1309466:-:11:MOB2:1471419:-:rev","TOLLIP--MOB2","ENSG00000078902","ENSG00000182208",2.0,1.0,2.0,1.0,0.787,"NA"]
["TCGA_SKCM","TCGA-EE-A3J4-06A","3:TCAIM:44401334:+:3:AC126121.2:59464740:-:strandcross","TCAIM--AC126121.2","ENSG00000179152","ENSG00000242545",27.0,1.0,1.0,1.0,0.530217521019653,0.0141843971631]
["TCGA_SKCM","TCGA-EE-A3J7-06A","3:LMLN:197984048:+:3:LRCH3:197865423:+:rev","LMLN--LRCH3","ENSG00000185621","ENSG00000186001",2.0,1.0,1.0,1.0,0.425,"NA"]
["TCGA_SKCM","TCGA-EE-A3JI-06A","6:HIVEP1:12015668:+:6:TXNDC5:7904723:-:strandcross","HIVEP1--TXNDC5","ENSG00000095951","ENSG00000239264",12.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_SKCM","TCGA-ER-A197-06A","17:ABR:1100637:-:2:AC007319.1:187191835:+:fusion","ABR--AC007319.1","ENSG00000159842","ENSG00000224063",7.0,1.0,1.0,1.0,0.88,0.00266666666667]
["TCGA_SKCM","TCGA-ER-A19C-06A","15:ZNF710:90001614:+:22:MIF-AS1:23896110:-:fusion","ZNF710--MIF-AS1","ENSG00000140548","ENSG00000218537",3.0,1.0,1.0,1.0,0.689,0.0061919504644]
["TCGA_SKCM","TCGA-ER-A19F-06A","11:TYR:89191418:+:10:MXI1:110228189:+:fusion","TYR--MXI1","ENSG00000077498","ENSG00000119950",3.0,5.0,3.0,3.0,0.774,0.0142857142857]
["TCGA_SKCM","TCGA-ER-A19L-06A","18:PQLC1:79933969:-:18:AC079062.1:73200789:-:reg","PQLC1--AC079062.1","ENSG00000122490","ENSG00000263711",6.0,1.0,1.0,1.0,0.797,0.0130434782609]
["TCGA_SKCM","TCGA-ER-A19N-06A","17:MCRIP1:81833238:-:17:P4HB:81845991:-:rev","MCRIP1--P4HB","ENSG00000225663","ENSG00000185624",14.0,2.0,2.0,2.0,0.828,"NA"]
["TCGA_SKCM","TCGA-ER-A19T-01A","19:LINC01791:31195703:+:19:NLRP7:54941750:-:strandcross","LINC01791--NLRP7","ENSG00000267777","ENSG00000167634",19.0,1.0,1.0,1.0,0.553426896012569,0.00986842105263]
["TCGA_SKCM","TCGA-ER-A19W-06A","1:PPIE:39753052:+:1:MACF1:39434414:+:rev","PPIE--MACF1","ENSG00000084072","ENSG00000127603",1.0,1.0,1.0,1.0,0.929,"NA"]
["TCGA_SKCM","TCGA-ER-A19W-06A","9:ABCA1:104858522:-:9:AL158070.1:105557175:-:rev","ABCA1--AL158070.1","ENSG00000165029","ENSG00000228317",11.0,1.0,1.0,1.0,0.599,"NA"]
["TCGA_SKCM","TCGA-ER-A3EV-06A","1:ADAMTSL4:150559905:+:15:ZNF609:64680185:+:fusion","ADAMTSL4--ZNF609","ENSG00000143382","ENSG00000180357",2.0,1.0,1.0,1.0,0.942,0.00819672131148]
["TCGA_SKCM","TCGA-ER-A3EV-06A","16:CTCF:67562724:+:16:LRRC36:67375258:+:rev","CTCF--LRRC36","ENSG00000102974","ENSG00000159708",2.0,1.0,1.0,1.0,0.994,"NA"]
["TCGA_SKCM","TCGA-FR-A3YN-06A","22:POLR2F:37986312:+:1:SFPQ:35178036:-:fusion","POLR2F--SFPQ","ENSG00000100142","ENSG00000116560",3.0,1.0,1.0,1.0,0.862,0.0]
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["TCGA_SKCM","TCGA-FS-A1Z7-06A","5:PDE4D:59768247:-:5:AC016642.1:58742000:-:reg","PDE4D--AC016642.1","ENSG00000113448","ENSG00000248475",7.0,2.0,2.0,2.0,0.929,0.0]
["TCGA_SKCM","TCGA-FS-A1ZC-06A","11:DENND5A:9203660:-:11:TMEM41B:9299701:-:rev","DENND5A--TMEM41B","ENSG00000184014","ENSG00000166471",2.0,1.0,1.0,1.0,0.798,"NA"]
["TCGA_SKCM","TCGA-FS-A1ZK-06A","10:SH3PXD2A:103724270:-:10:LINC01435:107760875:-:rev","SH3PXD2A--LINC01435","ENSG00000107957","ENSG00000229981",21.0,1.0,1.0,1.0,0.854864502765126,0.00235294117647]
["TCGA_SKCM","TCGA-FS-A1ZM-06A","5:LHFPL2:78564813:-:5:ARSB:78839426:-:rev","LHFPL2--ARSB","ENSG00000145685","ENSG00000113273",2.0,1.0,1.0,1.0,0.993,"NA"]
["TCGA_SKCM","TCGA-FS-A1ZT-06A","11:RBM14:66617057:+:11:ACTN3:66551239:+:rev","RBM14--ACTN3","ENSG00000239306","ENSG00000248746",1.0,1.0,1.0,1.0,0.904,"NA"]
["TCGA_SKCM","TCGA-FS-A4F4-06A","11:KIAA1549L:33561735:+:11:AC090124.1:29336082:-:strandcross","KIAA1549L--AC090124.1","ENSG00000110427","ENSG00000254530",7.0,1.0,1.0,1.0,0.901,0.00569800569801]
["TCGA_SKCM","TCGA-FS-A4F4-06A","5:ADCY2:7757586:+:22:CYB5R3:42628281:-:fusion","ADCY2--CYB5R3","ENSG00000078295","ENSG00000100243",1.0,1.0,1.0,1.0,0.728,0.00569800569801]
["TCGA_SKCM","TCGA-FS-A4F4-06A","12:AC069208.1:24213343:-:12:LINC00477:24571657:-:rev","AC069208.1--LINC00477","ENSG00000255864","ENSG00000197503",1.0,1.0,1.0,1.0,0.821,"NA"]
["TCGA_SKCM","TCGA-FW-A3I3-06A","5:PAPD4:79649190:+:5:LINC02059:86749116:+:reg","PAPD4--LINC02059","ENSG00000164329","ENSG00000250544",12.0,1.0,1.0,1.0,0.474,0.00909090909091]
["TCGA_SKCM","TCGA-FW-A3R5-06A","6:DHX16:30654706:-:6:DDR1-AS1:30869833:-:rev","DHX16--DDR1-AS1","ENSG00000204560","ENSG00000237775",3.0,1.0,1.0,1.0,0.573,"NA"]
["TCGA_SKCM","TCGA-GF-A6C8-06A","12:ARID2:45731314:+:12:AC073530.1:67094857:-:strandcross","ARID2--AC073530.1","ENSG00000189079","ENSG00000257083",5.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_SKCM","TCGA-GN-A265-06A","15:SCAPER:76665653:-:15:AC012409.2:96227273:+:strandcross","SCAPER--AC012409.2","ENSG00000140386","ENSG00000275443",5.0,1.0,1.0,1.0,0.861,0.00704225352113]
["TCGA_SKCM","TCGA-GN-A26A-06A","15:AC010931.3:74179156:-:15:ADAMTS17:100063759:-:rev","AC010931.3--ADAMTS17","ENSG00000261543","ENSG00000140470",5.0,1.0,1.0,1.0,0.933,0.0]
["TCGA_SKCM","TCGA-GN-A26D-06A","11:NARS2:78559539:-:11:AP002989.1:103680342:-:rev","NARS2--AP002989.1","ENSG00000137513","ENSG00000254987",84.0,1.0,1.0,1.0,0.966053882200014,0.0]
["TCGA_SKCM","TCGA-GN-A26D-06A","12:CPSF6:69239706:+:12:AC090503.2:73143854:-:strandcross","CPSF6--AC090503.2","ENSG00000111605","ENSG00000258294",62.0,1.0,1.0,1.0,0.920287203544478,0.0]
["TCGA_SKCM","TCGA-GN-A26D-06A","21:CHODL:17917400:+:11:AP001636.3:58979325:-:fusion","CHODL--AP001636.3","ENSG00000154645","ENSG00000255240",3.0,1.0,1.0,1.0,0.189,0.0336842105263]
["TCGA_SKCM","TCGA-GN-A4U8-06A","17:KANSL1:46192419:-:17:AC005703.3:15265456:+:strandcross","KANSL1--AC005703.3","ENSG00000120071","ENSG00000265445",3.0,2.0,1.0,1.0,0.217,0.0316091954023]
["TCGA_SKCM","TCGA-QB-A6FS-06A","19:PLEKHA4:48865503:-:19:NUCB1-AS1:48911174:-:rev","PLEKHA4--NUCB1-AS1","ENSG00000105559","ENSG00000235191",2.0,1.0,1.0,1.0,0.558,"NA"]
["TCGA_SKCM","TCGA-W3-AA1V-06B","12:KMT5A:123396432:+:8:AC090155.2:49496975:-:fusion","KMT5A--AC090155.2","ENSG00000183955","ENSG00000253380",55.0,1.0,1.0,1.0,0.446823025731464,0.015873015873]
["TCGA_SKCM","TCGA-WE-A8K4-01A","6:TRAM2:52535783:-:6:GFOD1:13365662:-:reg","TRAM2--GFOD1","ENSG00000065308","ENSG00000145990",2.0,1.0,1.0,1.0,0.637,0.00303951367781]
["TCGA_SKCM","TCGA-WE-A8K6-06A","3:SAMMSON:69999867:+:3:MITF:69879134:+:rev","SAMMSON--MITF","ENSG00000240405","ENSG00000187098",2.0,1.0,1.0,1.0,0.492,"NA"]
["TCGA_SKCM","TCGA-WE-A8ZQ-06A","6:SMAP1:70732511:+:1:PTGFRN:116974216:+:fusion","SMAP1--PTGFRN","ENSG00000112305","ENSG00000134247",2.0,1.0,1.0,1.0,0.838,0.0]
["TCGA_SKCM","TCGA-WE-A8ZX-06A","3:MITF:69879383:+:12:AC025031.1:46384668:-:fusion","MITF--AC025031.1","ENSG00000187098","ENSG00000257496",19.0,1.0,1.0,1.0,0.885333775001331,0.0]
["TCGA_SKCM","TCGA-YD-A9TA-06A","1:AK5:77483359:+:1:AC092813.2:76066038:+:rev","AK5--AC092813.2","ENSG00000154027","ENSG00000230027",3.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_SKCM","TCGA-YG-AA3P-06A","11:ACER3:76926667:+:11:AP002336.3:70325127:-:strandcross","ACER3--AP002336.3","ENSG00000078124","ENSG00000255539",5.0,1.0,1.0,1.0,0.872,0.0]
["TCGA_SKCM","TCGA-Z2-AA3V-06A","3:PLXNA1:126991566:+:17:BAIAP2:81115770:+:fusion","PLXNA1--BAIAP2","ENSG00000114554","ENSG00000175866",2.0,2.0,1.0,1.0,0.924,0.00311526479751]
["TCGA_STAD","TCGA-3M-AB47-01A","9:RAPGEF1:131739770:-:9:MAPKAP1:125543168:-:reg","RAPGEF1--MAPKAP1","ENSG00000107263","ENSG00000119487",4.0,1.0,1.0,1.0,0.908,0.00295857988166]
["TCGA_STAD","TCGA-B7-A5TK-01A","6:TMEM181:158573523:+:6:MCM9:118856545:-:strandcross","TMEM181--MCM9","ENSG00000146433","ENSG00000111877",2.0,1.0,1.0,1.0,0.929,0.0]
["TCGA_STAD","TCGA-BR-4187-01A","5:MARVELD2:69433093:+:5:RAD17:69410493:+:rev","MARVELD2--RAD17","ENSG00000152939","ENSG00000152942",2.0,1.0,1.0,1.0,0.8,"NA"]
["TCGA_STAD","TCGA-BR-4256-01A","12:KIAA1551:31970356:+:12:RAB3IP:69755384:+:reg","KIAA1551--RAB3IP","ENSG00000174718","ENSG00000127328",4.0,1.0,1.0,1.0,0.847,0.0]
["TCGA_STAD","TCGA-BR-4256-01A","7:CDK13:40002031:+:11:RBM4:66643450:+:fusion","CDK13--RBM4","ENSG00000065883","ENSG00000248643",5.0,1.0,1.0,1.0,0.779,0.0]
["TCGA_STAD","TCGA-BR-4280-01A","3:PAK2:196740157:+:9:DDX31:132612255:-:fusion","PAK2--DDX31","ENSG00000180370","ENSG00000125485",3.0,1.0,1.0,1.0,0.988,0.0]
["TCGA_STAD","TCGA-BR-6453-01A","2:GCC2:108452466:+:12:YBX3:10704148:-:fusion","GCC2--YBX3","ENSG00000135968","ENSG00000060138",4.0,1.0,1.0,1.0,0.246,0.0120481927711]
["TCGA_STAD","TCGA-BR-6454-01A","15:ADAM10:58749480:-:2:GLS:190920215:+:fusion","ADAM10--GLS","ENSG00000137845","ENSG00000115419",3.0,1.0,1.0,1.0,0.877,0.0]
["TCGA_STAD","TCGA-BR-6565-01A","13:GAS6:113863575:-:11:RBM4:66639700:+:fusion","GAS6--RBM4","ENSG00000183087","ENSG00000248643",1.0,1.0,1.0,1.0,0.967,0.0]
["TCGA_STAD","TCGA-BR-7197-01A","6:PDE7B:135852019:+:6:AL357060.3:137824577:-:strandcross","PDE7B--AL357060.3","ENSG00000171408","ENSG00000237499",18.0,1.0,1.0,1.0,0.704988932322832,0.0]
["TCGA_STAD","TCGA-BR-7716-01A","19:LSR:35259064:+:16:CHMP1A:89647331:-:fusion","LSR--CHMP1A","ENSG00000105699","ENSG00000131165",4.0,3.0,1.0,1.0,0.972,0.0]
["TCGA_STAD","TCGA-BR-7716-01A","15:GCNT3:59616881:+:15:FAM81A:59458550:+:rev","GCNT3--FAM81A","ENSG00000140297","ENSG00000157470",4.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_STAD","TCGA-BR-7723-01A","21:IFNGR2:33403616:+:18:LINC01901:39862249:-:fusion","IFNGR2--LINC01901","ENSG00000159128","ENSG00000267413",12.0,1.0,1.0,1.0,0.934,0.0]
["TCGA_STAD","TCGA-BR-7723-01A","5:ETF1:138542833:-:5:SIL1:139127853:-:rev","ETF1--SIL1","ENSG00000120705","ENSG00000120725",2.0,1.0,1.0,1.0,0.499,"NA"]
["TCGA_STAD","TCGA-BR-7901-01A","12:RFLNA:124311927:+:12:AC068888.1:53014943:-:strandcross","RFLNA--AC068888.1","ENSG00000178882","ENSG00000257337",5.0,1.0,1.0,1.0,0.984,0.0]
["TCGA_STAD","TCGA-BR-7901-01A","4:FBXL5:15638508:-:12:AC087242.1:18715686:+:fusion","FBXL5--AC087242.1","ENSG00000118564","ENSG00000255648",7.0,1.0,1.0,1.0,0.939,0.0]
["TCGA_STAD","TCGA-BR-7901-01A","6:GMDS:2245321:-:17:KRT40:40984274:-:fusion","GMDS--KRT40","ENSG00000112699","ENSG00000204889",10.0,1.0,1.0,1.0,0.993,0.0]
["TCGA_STAD","TCGA-BR-7901-01A","1:PMVK:154932352:-:1:MUC1:155187374:-:rev","PMVK--MUC1","ENSG00000163344","ENSG00000185499",4.0,1.0,1.0,1.0,0.799,"NA"]
["TCGA_STAD","TCGA-BR-7901-01A","8:AGO2:140635485:-:8:PTK2:140675499:-:rev","AGO2--PTK2","ENSG00000123908","ENSG00000169398",7.0,4.0,4.0,3.0,0.49,"NA"]
["TCGA_STAD","TCGA-BR-7959-01A","5:TRIO:14143882:+:5:LINC02211:25297703:+:reg","TRIO--LINC02211","ENSG00000038382","ENSG00000245662",2.0,1.0,1.0,1.0,0.242,0.00101419878296]
["TCGA_STAD","TCGA-BR-7959-01A","6:FKBP5:35688804:-:13:STK24:98482321:-:fusion","FKBP5--STK24","ENSG00000096060","ENSG00000102572",1.0,1.0,1.0,1.0,0.747,0.0]
["TCGA_STAD","TCGA-BR-8058-01A","19:CBLC:44792514:+:19:CEACAM19:44666958:+:rev","CBLC--CEACAM19","ENSG00000142273","ENSG00000186567",1.0,1.0,1.0,1.0,0.85,"NA"]
["TCGA_STAD","TCGA-BR-8059-01A","2:PLEKHB2:131132991:+:20:MAP1LC3A:34560172:+:fusion","PLEKHB2--MAP1LC3A","ENSG00000115762","ENSG00000101460",2.0,1.0,1.0,1.0,0.935,0.0]
["TCGA_STAD","TCGA-BR-8060-01A","19:DNM2:10777216:+:19:KEAP1:10492262:-:strandcross","DNM2--KEAP1","ENSG00000079805","ENSG00000079999",3.0,1.0,1.0,1.0,0.462,0.0]
["TCGA_STAD","TCGA-BR-8060-01A","6:CD24:106974578:-:6:CRYBG1:106568472:+:strandcross","CD24--CRYBG1","ENSG00000272398","ENSG00000112297",67.0,1.0,1.0,1.0,0.845670855098613,0.0]
["TCGA_STAD","TCGA-BR-8060-01A","1:ELOA:23743578:+:1:KDM1A:23030469:+:rev","ELOA--KDM1A","ENSG00000011007","ENSG00000004487",1.0,1.0,1.0,1.0,0.894,"NA"]
["TCGA_STAD","TCGA-BR-8077-01A","12:ATXN2:111598784:-:7:AGR2:16801803:-:fusion","ATXN2--AGR2","ENSG00000204842","ENSG00000106541",2.0,1.0,1.0,1.0,0.923,0.0]
["TCGA_STAD","TCGA-BR-8078-01A","10:EIF3A:119080628:-:2:UBR3:170015281:+:fusion","EIF3A--UBR3","ENSG00000107581","ENSG00000144357",3.0,1.0,1.0,1.0,0.334,0.0]
["TCGA_STAD","TCGA-BR-8078-01A","8:FAM160B2:22100972:+:19:MAP1S:17724126:+:fusion","FAM160B2--MAP1S","ENSG00000158863","ENSG00000130479",2.0,1.0,1.0,1.0,0.418,0.0]
["TCGA_STAD","TCGA-BR-8081-01A","11:CTTN:70414652:+:12:LIMA1:50200884:-:fusion","CTTN--LIMA1","ENSG00000085733","ENSG00000050405",2.0,1.0,1.0,1.0,0.339,0.00185356811863]
["TCGA_STAD","TCGA-BR-8289-01A","5:FGFR4:177092511:+:17:CCDC137:81667729:+:fusion","FGFR4--CCDC137","ENSG00000160867","ENSG00000185298",7.0,1.0,1.0,1.0,0.981,0.0]
["TCGA_STAD","TCGA-BR-8289-01A","8:XKR6:11200576:-:8:LONRF1:12743282:-:rev","XKR6--LONRF1","ENSG00000171044","ENSG00000154359",5.0,1.0,1.0,1.0,0.191,0.0103969754253]
["TCGA_STAD","TCGA-BR-8289-01A","17:TOP2A:40398558:-:17:SMARCE1:40645847:-:rev","TOP2A--SMARCE1","ENSG00000131747","ENSG00000073584",5.0,1.0,1.0,1.0,0.579,"NA"]
["TCGA_STAD","TCGA-BR-8289-01A","1:NOS1AP:162070282:+:1:AL590408.1:162039343:+:rev","NOS1AP--AL590408.1","ENSG00000198929","ENSG00000227818",4.0,1.0,1.0,1.0,0.594,"NA"]
["TCGA_STAD","TCGA-BR-8289-01A","7:KMT2E:105066807:+:7:LHFPL3:104906187:+:rev","KMT2E--LHFPL3","ENSG00000005483","ENSG00000187416",12.0,2.0,2.0,2.0,0.862,"NA"]
["TCGA_STAD","TCGA-BR-8295-01A","7:KCNH2:150974711:-:7:SMARCD3:151245671:-:rev","KCNH2--SMARCD3","ENSG00000055118","ENSG00000082014",3.0,1.0,1.0,1.0,0.989,"NA"]
["TCGA_STAD","TCGA-BR-8297-01A","18:OSBPL1A:24271622:-:18:AC091043.1:22098371:+:strandcross","OSBPL1A--AC091043.1","ENSG00000141447","ENSG00000263588",7.0,1.0,1.0,1.0,0.607,0.0]
["TCGA_STAD","TCGA-BR-8297-01A","2:ANKRD39:96857888:-:2:ACTR1B:97661946:-:rev","ANKRD39--ACTR1B","ENSG00000163126","ENSG00000115073",2.0,1.0,1.0,1.0,0.938,"NA"]
["TCGA_STAD","TCGA-BR-8362-01A","11:STARD10:72780975:-:11:CPT1A:68794911:-:reg","STARD10--CPT1A","ENSG00000214530","ENSG00000110090",8.0,1.0,1.0,1.0,0.628,0.00428816466552]
["TCGA_STAD","TCGA-BR-8362-01A","19:LSR:35250659:+:19:UBA2:34451981:+:rev","LSR--UBA2","ENSG00000105699","ENSG00000126261",2.0,1.0,1.0,1.0,0.677,"NA"]
["TCGA_STAD","TCGA-BR-8364-01A","3:MAP3K13:185328962:+:3:DNAH12:57386603:-:strandcross","MAP3K13--DNAH12","ENSG00000073803","ENSG00000174844",6.0,1.0,1.0,1.0,0.83,0.0]
["TCGA_STAD","TCGA-BR-8366-01A","6:CARMIL1:25284909:+:6:IMPG1:75947533:-:strandcross","CARMIL1--IMPG1","ENSG00000079691","ENSG00000112706",2.0,1.0,1.0,1.0,0.945,0.0]
["TCGA_STAD","TCGA-BR-8368-01A","6:CD24:106974578:-:6:CRYBG1:106563764:+:strandcross","CD24--CRYBG1","ENSG00000272398","ENSG00000112297",2.0,2.0,2.0,2.0,0.676,0.0]
["TCGA_STAD","TCGA-BR-8373-01A","2:NOL10:10600853:-:7:SND1:128089489:+:fusion","NOL10--SND1","ENSG00000115761","ENSG00000197157",4.0,1.0,1.0,1.0,0.356,0.0]
["TCGA_STAD","TCGA-BR-8373-01A","19:CRTC1:18753585:+:19:SSBP4:18427351:+:rev","CRTC1--SSBP4","ENSG00000105662","ENSG00000130511",3.0,1.0,1.0,1.0,0.478,"NA"]
["TCGA_STAD","TCGA-BR-8373-01A","22:JOSD1:38699803:-:22:DNAL4:38782870:-:rev","JOSD1--DNAL4","ENSG00000100221","ENSG00000100246",3.0,1.0,1.0,1.0,0.843,"NA"]
["TCGA_STAD","TCGA-BR-8373-01A","2:ASAP2:9323250:+:2:AC093904.2:9104436:+:rev","ASAP2--AC093904.2","ENSG00000151693","ENSG00000242136",3.0,1.0,1.0,1.0,0.711,"NA"]
["TCGA_STAD","TCGA-BR-8382-01A","16:PKD1:2097148:-:16:ECI1:2240145:-:rev","PKD1--ECI1","ENSG00000008710","ENSG00000167969",4.0,1.0,1.0,1.0,0.951,"NA"]
["TCGA_STAD","TCGA-BR-8384-01A","7:ACTB:5530524:-:3:SKIL:170359699:+:fusion","ACTB--SKIL","ENSG00000075624","ENSG00000136603",2.0,2.0,1.0,1.0,0.577,0.0176991150442]
["TCGA_STAD","TCGA-BR-8484-01A","6:XPO5:43533907:-:12:LYZ:69353153:+:fusion","XPO5--LYZ","ENSG00000124571","ENSG00000090382",2.0,1.0,1.0,1.0,0.781,0.00252684775742]
["TCGA_STAD","TCGA-BR-8485-01A","16:ZFPM1:88489153:+:11:CAPRIN1:34052421:+:fusion","ZFPM1--CAPRIN1","ENSG00000179588","ENSG00000135387",3.0,1.0,1.0,1.0,0.613,0.00619578686493]
["TCGA_STAD","TCGA-BR-8486-01A","16:LITAF:11586886:-:16:BCAR4:11820297:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",6.0,12.0,10.0,9.0,0.691,"NA"]
["TCGA_STAD","TCGA-BR-8589-01A","11:CHEK1:125644643:+:11:STT3A:125612592:+:rev","CHEK1--STT3A","ENSG00000149554","ENSG00000134910",2.0,2.0,3.0,2.0,0.662,"NA"]
["TCGA_STAD","TCGA-BR-8590-01A","6:UST:148747677:+:6:IYD:150394099:+:reg","UST--IYD","ENSG00000111962","ENSG00000009765",6.0,1.0,1.0,1.0,0.973,0.0]
["TCGA_STAD","TCGA-BR-8591-01A","X:RPL39:119789908:-:7:AGR2:16801803:-:fusion","RPL39--AGR2","ENSG00000198918","ENSG00000106541",2.0,1.0,1.0,1.0,0.84,0.00140350877193]
["TCGA_STAD","TCGA-BR-8678-01A","1:CASZ1:10705492:-:17:ASPSCR1:82009037:+:fusion","CASZ1--ASPSCR1","ENSG00000130940","ENSG00000169696",1.0,1.0,1.0,1.0,0.818,0.00323974082073]
["TCGA_STAD","TCGA-BR-8678-01A","16:CYB5B:69447278:+:16:SNTB2:69284048:+:rev","CYB5B--SNTB2","ENSG00000103018","ENSG00000168807",2.0,1.0,1.0,1.0,0.774,"NA"]
["TCGA_STAD","TCGA-BR-8678-01A","X:BRCC3:155090839:+:X:DKC1:154764899:+:rev","BRCC3--DKC1","ENSG00000185515","ENSG00000130826",3.0,1.0,1.0,1.0,0.996,"NA"]
["TCGA_STAD","TCGA-BR-A44U-01A","16:ARHGAP17:25015209:-:16:NSMCE1:27226836:-:rev","ARHGAP17--NSMCE1","ENSG00000140750","ENSG00000169189",2.0,1.0,1.0,1.0,0.711,0.0]
["TCGA_STAD","TCGA-BR-A44U-01A","2:RAMP1:237877362:+:2:EIF5B:99360236:+:rev","RAMP1--EIF5B","ENSG00000132329","ENSG00000158417",3.0,1.0,1.0,1.0,0.942,0.0]
["TCGA_STAD","TCGA-BR-A452-01A","3:MYLK-AS1:123585801:+:3:IFT122:129469342:+:reg","MYLK-AS1--IFT122","ENSG00000239523","ENSG00000163913",2.0,1.0,1.0,1.0,0.447,0.002574002574]
["TCGA_STAD","TCGA-BR-A452-01A","12:MAPKAPK5:111880527:+:12:AC002996.1:111781918:+:rev","MAPKAPK5--AC002996.1","ENSG00000089022","ENSG00000257767",12.0,1.0,1.0,1.0,0.678,"NA"]
["TCGA_STAD","TCGA-BR-A452-01A","1:GNB1:1890820:-:1:CFAP74:1927746:-:rev","GNB1--CFAP74","ENSG00000078369","ENSG00000142609",8.0,2.0,2.0,2.0,0.702,"NA"]
["TCGA_STAD","TCGA-BR-A452-01A","9:FSD1L:105484502:+:9:SLC44A1:105383123:+:rev","FSD1L--SLC44A1","ENSG00000106701","ENSG00000070214",5.0,1.0,1.0,1.0,0.796,"NA"]
["TCGA_STAD","TCGA-BR-A453-01A","7:KMT2C:152435626:-:14:BATF:75546462:+:fusion","KMT2C--BATF","ENSG00000055609","ENSG00000156127",2.0,1.0,1.0,1.0,0.937,0.0]
["TCGA_STAD","TCGA-BR-A4CR-01A","8:CPNE3:86540334:+:8:ATP6V0D2:86098904:+:rev","CPNE3--ATP6V0D2","ENSG00000085719","ENSG00000147614",4.0,1.0,1.0,1.0,0.43,"NA"]
["TCGA_STAD","TCGA-BR-A4IY-01A","1:RCC1:28506084:+:17:NARF:82485497:+:fusion","RCC1--NARF","ENSG00000180198","ENSG00000141562",3.0,2.0,1.0,1.0,0.962,0.0]
["TCGA_STAD","TCGA-BR-A4J1-01A","17:NME1-NME2:51168343:+:17:BECN1:42811797:-:strandcross","NME1-NME2--BECN1","ENSG00000011052","ENSG00000126581",2.0,1.0,1.0,1.0,0.925,0.0]
["TCGA_STAD","TCGA-BR-A4J1-01A","12:DDX11:31085126:+:12:TSPAN11:30991856:+:rev","DDX11--TSPAN11","ENSG00000013573","ENSG00000110900",9.0,1.0,1.0,1.0,0.507,"NA"]
["TCGA_STAD","TCGA-BR-A4J4-01A","17:DDX52:37626788:-:17:IKZF3:39766493:-:rev","DDX52--IKZF3","ENSG00000278053","ENSG00000161405",181.0,1.0,2.0,1.0,0.902384588913132,0.0]
["TCGA_STAD","TCGA-BR-A4J4-01A","1:RPS8:44778087:+:4:SPP1:87975715:+:fusion","RPS8--SPP1","ENSG00000142937","ENSG00000118785",3.0,2.0,1.0,1.0,0.849,0.0]
["TCGA_STAD","TCGA-BR-A4J6-01A","7:FAM20C:208976:+:7:MAD1L1:1816228:-:strandcross","FAM20C--MAD1L1","ENSG00000177706","ENSG00000002822",3.0,2.0,1.0,1.0,0.49,0.00993377483444]
["TCGA_STAD","TCGA-BR-A4J9-01A","17:CEP112:65851804:-:5:DROSHA:31410887:-:fusion","CEP112--DROSHA","ENSG00000154240","ENSG00000113360",2.0,1.0,1.0,1.0,0.251,0.00443458980044]
["TCGA_STAD","TCGA-BR-A4J9-01A","9:FANCC:95240649:-:2:GLI2:120927361:+:fusion","FANCC--GLI2","ENSG00000158169","ENSG00000074047",4.0,1.0,1.0,1.0,0.503,0.00110864745011]
["TCGA_STAD","TCGA-BR-A4PE-01A","3:MSL2:136194972:-:15:AC104574.2:61590003:-:fusion","MSL2--AC104574.2","ENSG00000174579","ENSG00000259616",8.0,1.0,1.0,1.0,0.328,0.00646950092421]
["TCGA_STAD","TCGA-BR-A4PE-01A","6:C6orf106:34646601:-:6:OFCC1:9845593:-:reg","C6orf106--OFCC1","ENSG00000196821","ENSG00000181355",8.0,1.0,1.0,1.0,0.983,0.0]
["TCGA_STAD","TCGA-BR-A4PF-01A","4:RGS12:3343053:+:4:MSANTD1:3263885:+:rev","RGS12--MSANTD1","ENSG00000159788","ENSG00000188981",1.0,1.0,1.0,1.0,0.913,"NA"]
["TCGA_STAD","TCGA-BR-A4QM-01A","20:BLCAP:37527793:-:1:SFPQ:35178036:-:fusion","BLCAP--SFPQ","ENSG00000166619","ENSG00000116560",2.0,1.0,1.0,1.0,0.836,0.0]
["TCGA_STAD","TCGA-CD-5799-01A","17:MIEN1:39729685:-:17:AATF:37056601:+:strandcross","MIEN1--AATF","ENSG00000141741","ENSG00000275700",2.0,1.0,1.0,1.0,0.441,0.0]
["TCGA_STAD","TCGA-CD-5800-01A","20:EIF6:35284176:-:20:UQCC1:35347272:-:rev","EIF6--UQCC1","ENSG00000242372","ENSG00000101019",2.0,1.0,1.0,1.0,0.529,"NA"]
["TCGA_STAD","TCGA-CD-8524-01A","12:FAM60A:31323944:-:12:AC022509.1:26231985:-:reg","FAM60A--AC022509.1","ENSG00000139146","ENSG00000255750",2.0,1.0,1.0,1.0,0.736,0.0]
["TCGA_STAD","TCGA-CD-8524-01A","12:PPFIBP1:27578239:+:12:FAM60A:31298224:-:strandcross","PPFIBP1--FAM60A","ENSG00000110841","ENSG00000139146",3.0,1.0,1.0,1.0,0.677,0.0]
["TCGA_STAD","TCGA-CD-8524-01A","2:AC068547.1:151812357:-:2:IL1B:112836244:-:reg","AC068547.1--IL1B","ENSG00000162980","ENSG00000125538",15.0,1.0,1.0,1.0,0.353,0.0]
["TCGA_STAD","TCGA-CD-8524-01A","7:LRGUK:134127664:+:7:EXOC4:133895599:+:rev","LRGUK--EXOC4","ENSG00000155530","ENSG00000131558",2.0,1.0,1.0,1.0,0.536,"NA"]
["TCGA_STAD","TCGA-CD-8525-01A","6:AFDN:167962567:+:6:UNC93A:167303919:+:rev","AFDN--UNC93A","ENSG00000130396","ENSG00000112494",3.0,1.0,1.0,1.0,0.875,"NA"]
["TCGA_STAD","TCGA-CD-8526-01A","9:DENND1A:123630376:-:9:PTPN3:109391561:-:reg","DENND1A--PTPN3","ENSG00000119522","ENSG00000070159",2.0,1.0,1.0,1.0,0.371,0.00327868852459]
["TCGA_STAD","TCGA-CD-8527-01A","3:HEMK1:50569811:+:3:LINC01983:195836615:-:strandcross","HEMK1--LINC01983","ENSG00000114735","ENSG00000223783",42.0,1.0,1.0,1.0,0.592829897355031,0.00359712230216]
["TCGA_STAD","TCGA-CD-8527-01A","2:TET3:74080591:+:2:AC073046.1:73985980:+:rev","TET3--AC073046.1","ENSG00000187605","ENSG00000235499",2.0,1.0,1.0,1.0,0.892,"NA"]
["TCGA_STAD","TCGA-CD-8528-01A","15:WDR72:53732997:-:15:AC036108.1:99100851:-:rev","WDR72--AC036108.1","ENSG00000166415","ENSG00000259475",4.0,1.0,1.0,1.0,0.944,0.0]
["TCGA_STAD","TCGA-CD-8528-01A","6:ATG5:106201972:-:8:PVT1:127890589:+:fusion","ATG5--PVT1","ENSG00000057663","ENSG00000249859",54.0,1.0,1.0,1.0,0.822592008390206,0.0]
["TCGA_STAD","TCGA-CD-8528-01A","8:PVT1:127796071:+:6:AL080314.1:106699842:+:fusion","PVT1--AL080314.1","ENSG00000249859","ENSG00000229654",32.0,1.0,1.0,1.0,0.336222368394749,0.0]
["TCGA_STAD","TCGA-CD-8529-01A","3:LRRFIP2:37148894:-:3:EOMES:27720325:-:reg","LRRFIP2--EOMES","ENSG00000093167","ENSG00000163508",3.0,1.0,1.0,1.0,0.651,0.00258843830889]
["TCGA_STAD","TCGA-CD-8530-01A","10:DLG5:77926217:-:10:AC024603.1:76558642:-:reg","DLG5--AC024603.1","ENSG00000151208","ENSG00000269256",3.0,1.0,1.0,1.0,0.604,0.0]
["TCGA_STAD","TCGA-CD-8531-01A","11:TMEM223:62791679:-:11:FERMT3:64210611:+:strandcross","TMEM223--FERMT3","ENSG00000168569","ENSG00000149781",2.0,1.0,1.0,1.0,0.954,0.0]
["TCGA_STAD","TCGA-CD-8531-01A","3:TKT:53255836:-:3:DOCK3:50890026:+:strandcross","TKT--DOCK3","ENSG00000163931","ENSG00000088538",5.0,1.0,1.0,1.0,0.85,0.0]
["TCGA_STAD","TCGA-CD-8535-01A","16:NKD1:50549555:+:16:FAM192A:57173869:-:strandcross","NKD1--FAM192A","ENSG00000140807","ENSG00000172775",2.0,1.0,1.0,1.0,0.795,0.0]
["TCGA_STAD","TCGA-CD-8535-01A","10:DDX50:68919981:+:10:CCAR1:68771206:+:rev","DDX50--CCAR1","ENSG00000107625","ENSG00000060339",2.0,1.0,1.0,1.0,0.86,"NA"]
["TCGA_STAD","TCGA-CD-8536-01A","18:TYMS:662320:+:10:TUBGCP2:133293769:-:fusion","TYMS--TUBGCP2","ENSG00000176890","ENSG00000130640",2.0,1.0,1.0,1.0,0.765,0.0]
["TCGA_STAD","TCGA-CD-8536-01A","19:SAMD4B:39342576:+:1:SKI:2302978:+:fusion","SAMD4B--SKI","ENSG00000179134","ENSG00000157933",2.0,1.0,1.0,1.0,0.226,0.00686274509804]
["TCGA_STAD","TCGA-CD-A489-01A","10:WBP1L:102744143:+:10:SUFU:102592582:+:rev","WBP1L--SUFU","ENSG00000166272","ENSG00000107882",2.0,3.0,4.0,3.0,0.984,"NA"]
["TCGA_STAD","TCGA-CG-4441-01A","3:LPP:188153363:+:3:TPRG1:189310386:+:reg","LPP--TPRG1","ENSG00000145012","ENSG00000188001",2.0,1.0,1.0,1.0,0.528,0.0016200891049]
["TCGA_STAD","TCGA-CG-5718-01A","20:TMEM189:50130856:-:20:LINC01270:50311805:+:strandcross","TMEM189--LINC01270","ENSG00000124208","ENSG00000203999",22.0,1.0,1.0,1.0,0.741122208825904,0.00187090739008]
["TCGA_STAD","TCGA-CG-5719-01A","10:ZEB1-AS1:31319515:-:10:ZEB1:31461037:+:strandcross","ZEB1-AS1--ZEB1","ENSG00000237036","ENSG00000148516",5.0,1.0,3.0,1.0,0.421,0.00205761316872]
["TCGA_STAD","TCGA-CG-5721-01A","9:FUBP3:130579764:+:18:TXNL4A:79977701:-:fusion","FUBP3--TXNL4A","ENSG00000107164","ENSG00000163297",2.0,1.0,1.0,1.0,0.675,0.0]
["TCGA_STAD","TCGA-CG-5725-01A","19:ZNF317:9140592:+:19:HNRNPM:8485603:+:rev","ZNF317--HNRNPM","ENSG00000130803","ENSG00000099783",2.0,1.0,1.0,1.0,0.506,"NA"]
["TCGA_STAD","TCGA-CG-5732-01A","5:OCLN:69504294:+:5:MARVELD2:69419371:+:rev","OCLN--MARVELD2","ENSG00000197822","ENSG00000152939",2.0,1.0,1.0,1.0,0.666,"NA"]
["TCGA_STAD","TCGA-D7-6519-01A","12:LEMD3:65171118:+:12:MDM1:68313753:-:strandcross","LEMD3--MDM1","ENSG00000174106","ENSG00000111554",11.0,1.0,1.0,1.0,0.84,0.0010183299389]
["TCGA_STAD","TCGA-D7-6526-01A","1:RLF:40161636:+:3:SLCO2A1:133979618:-:fusion","RLF--SLCO2A1","ENSG00000117000","ENSG00000174640",2.0,1.0,1.0,1.0,0.479,0.0]
["TCGA_STAD","TCGA-D7-6526-01A","17:WIPF2:40219492:+:17:CASC3:40161753:+:rev","WIPF2--CASC3","ENSG00000171475","ENSG00000108349",12.0,1.0,2.0,1.0,0.832,"NA"]
["TCGA_STAD","TCGA-D7-6527-01A","3:SLC6A6:14447816:+:3:AC093495.1:14165876:+:rev","SLC6A6--AC093495.1","ENSG00000131389","ENSG00000228242",2.0,1.0,1.0,1.0,0.991,"NA"]
["TCGA_STAD","TCGA-D7-6820-01A","17:LINC00511:72592203:-:8:AC025871.1:28455624:+:fusion","LINC00511--AC025871.1","ENSG00000227036","ENSG00000253567",56.0,1.0,1.0,1.0,0.458171154012597,7.96812749004E-4]
["TCGA_STAD","TCGA-D7-8570-01A","2:AAK1:69642878:-:2:AC012499.1:177698429:+:strandcross","AAK1--AC012499.1","ENSG00000115977","ENSG00000229941",3.0,1.0,1.0,1.0,0.813,0.0]
["TCGA_STAD","TCGA-D7-8570-01A","6:SENP6:75602576:+:8:STK3:98548161:-:fusion","SENP6--STK3","ENSG00000112701","ENSG00000104375",2.0,1.0,1.0,1.0,0.507,0.0]
["TCGA_STAD","TCGA-D7-8573-01A","21:DIP2A:46459222:+:21:PCNT:46381694:+:rev","DIP2A--PCNT","ENSG00000160305","ENSG00000160299",2.0,1.0,1.0,1.0,0.979,"NA"]
["TCGA_STAD","TCGA-D7-8575-01A","15:ABHD17C:80696019:+:12:AC022509.1:26231119:-:fusion","ABHD17C--AC022509.1","ENSG00000136379","ENSG00000255750",3.0,1.0,1.0,1.0,0.758,0.0]
["TCGA_STAD","TCGA-D7-8576-01A","18:NPC1:23586287:-:18:MYL12B:3272884:+:strandcross","NPC1--MYL12B","ENSG00000141458","ENSG00000118680",2.0,2.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-D7-8579-01A","19:DAPK3:3969674:-:19:AC006130.1:2847384:-:reg","DAPK3--AC006130.1","ENSG00000167657","ENSG00000267063",14.0,1.0,1.0,1.0,0.855,0.0]
["TCGA_STAD","TCGA-D7-A4YU-01A","8:FAM49B:129939608:-:8:PVT1:128070160:+:strandcross","FAM49B--PVT1","ENSG00000153310","ENSG00000249859",9.0,2.0,1.0,1.0,0.713,0.0]
["TCGA_STAD","TCGA-D7-A4YV-01A","1:FAAP20:2193639:-:2:AUP1:74528006:-:fusion","FAAP20--AUP1","ENSG00000162585","ENSG00000115307",2.0,1.0,1.0,1.0,0.757,0.0]
["TCGA_STAD","TCGA-D7-A4YY-01A","21:DYRK1A:37367628:+:21:AP000695.2:36531971:+:rev","DYRK1A--AP000695.2","ENSG00000157540","ENSG00000233818",2.0,1.0,1.0,1.0,0.456,"NA"]
["TCGA_STAD","TCGA-D7-A6EX-01A","7:CDK14:90747775:+:7:PCLO:82966487:-:strandcross","CDK14--PCLO","ENSG00000058091","ENSG00000186472",2.0,1.0,1.0,1.0,0.919,0.0]
["TCGA_STAD","TCGA-D7-A6F0-01A","17:AP2B1:35608387:+:1:MFN2:11998988:+:fusion","AP2B1--MFN2","ENSG00000006125","ENSG00000116688",3.0,1.0,1.0,1.0,0.887,0.0]
["TCGA_STAD","TCGA-D7-A6F0-01A","12:SMARCC2:56168060:-:12:RNF41:56214070:-:rev","SMARCC2--RNF41","ENSG00000139613","ENSG00000181852",6.0,1.0,1.0,1.0,0.69,"NA"]
["TCGA_STAD","TCGA-D7-A74A-01A","16:ZC3H18:88570566:+:5:EPB41L4A-AS1:112161703:+:fusion","ZC3H18--EPB41L4A-AS1","ENSG00000158545","ENSG00000224032",2.0,1.0,1.0,1.0,0.677,0.00150829562594]
["TCGA_STAD","TCGA-EQ-8122-01A","17:WIPF2:40273999:+:17:JUP:41765067:-:strandcross","WIPF2--JUP","ENSG00000171475","ENSG00000173801",3.0,1.0,1.0,1.0,0.274,0.00151860288535]
["TCGA_STAD","TCGA-EQ-8122-01A","11:NDUFS8:68033283:+:11:ALDH3B1:68026009:+:rev","NDUFS8--ALDH3B1","ENSG00000110717","ENSG00000006534",2.0,1.0,1.0,1.0,0.995,"NA"]
["TCGA_STAD","TCGA-EQ-A4SO-01A","1:DCAF6:167937008:+:11:MUC5B:1256156:+:fusion","DCAF6--MUC5B","ENSG00000143164","ENSG00000117983",2.0,1.0,1.0,1.0,0.505,0.00111982082867]
["TCGA_STAD","TCGA-FP-7998-01A","19:SIPA1L3:38130772:+:16:IST1:71927614:+:fusion","SIPA1L3--IST1","ENSG00000105738","ENSG00000182149",2.0,1.0,1.0,1.0,0.759,7.91139240506E-4]
["TCGA_STAD","TCGA-FP-8210-01A","10:DDIT4:72274060:+:5:RASGRF2:81092801:+:fusion","DDIT4--RASGRF2","ENSG00000168209","ENSG00000113319",2.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-FP-8631-01A","12:RAPGEF3:47741505:-:9:EXD3:137309700:-:fusion","RAPGEF3--EXD3","ENSG00000079337","ENSG00000187609",4.0,1.0,1.0,1.0,0.963,0.0]
["TCGA_STAD","TCGA-FP-8631-01A","17:TOP2A:40406384:-:17:SMARCE1:40645847:-:rev","TOP2A--SMARCE1","ENSG00000131747","ENSG00000073584",2.0,1.0,1.0,1.0,0.877,"NA"]
["TCGA_STAD","TCGA-FP-8631-01A","X:CLIC2:155298785:-:X:TMLHE:155545277:-:rev","CLIC2--TMLHE","ENSG00000155962","ENSG00000185973",1.0,1.0,1.0,1.0,0.804,"NA"]
["TCGA_STAD","TCGA-FP-A4BF-01A","7:MDFIC:114942397:+:6:REPS1:138921124:-:fusion","MDFIC--REPS1","ENSG00000135272","ENSG00000135597",6.0,1.0,1.0,1.0,0.773,0.0]
["TCGA_STAD","TCGA-HF-7131-01A","9:SHB:37948635:-:9:CNTFR-AS1:34580100:+:strandcross","SHB--CNTFR-AS1","ENSG00000255872","ENSG00000237159",7.0,1.0,1.0,1.0,0.298,0.00162337662338]
["TCGA_STAD","TCGA-HF-7131-01A","17:PLCD3:45117994:-:17:AC008105.1:45239241:-:rev","PLCD3--AC008105.1","ENSG00000161714","ENSG00000233175",15.0,1.0,1.0,1.0,0.827,"NA"]
["TCGA_STAD","TCGA-HF-7133-01A","22:CABIN1:24098192:+:13:LINC01054:114330778:-:fusion","CABIN1--LINC01054","ENSG00000099991","ENSG00000229723",13.0,1.0,1.0,1.0,0.622,0.00103626943005]
["TCGA_STAD","TCGA-HF-7136-01A","6:CEP57L1:109140675:+:6:BCKDHB:80127547:+:rev","CEP57L1--BCKDHB","ENSG00000183137","ENSG00000083123",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_STAD","TCGA-HF-A5NB-01A","5:GTF2H2C:69560242:+:5:CCNB1:69175397:+:rev","GTF2H2C--CCNB1","ENSG00000183474","ENSG00000134057",4.0,1.0,1.0,1.0,0.846,"NA"]
["TCGA_STAD","TCGA-HF-A5NB-01A","8:UBE2V2:48008470:+:8:SPIDR:47396376:+:rev","UBE2V2--SPIDR","ENSG00000169139","ENSG00000164808",2.0,1.0,1.0,1.0,0.509,"NA"]
["TCGA_STAD","TCGA-HU-8243-01A","7:EGFR:55019365:+:7:VOPP1:55521130:-:strandcross","EGFR--VOPP1","ENSG00000146648","ENSG00000154978",3.0,3.0,3.0,3.0,0.202,0.0127659574468]
["TCGA_STAD","TCGA-HU-8602-01A","14:ACYP1:75069210:-:14:NEK9:75088641:-:rev","ACYP1--NEK9","ENSG00000119640","ENSG00000119638",2.0,1.0,1.0,1.0,0.879,"NA"]
["TCGA_STAD","TCGA-HU-8610-01A","10:COX15:99723956:-:10:DNMBP:99888953:-:rev","COX15--DNMBP","ENSG00000014919","ENSG00000107554",2.0,1.0,1.0,1.0,0.487,"NA"]
["TCGA_STAD","TCGA-HU-A4G3-01A","5:PDE4D:59768247:-:5:AC016642.1:58742000:-:reg","PDE4D--AC016642.1","ENSG00000113448","ENSG00000248475",11.0,2.0,2.0,2.0,0.952,0.0]
["TCGA_STAD","TCGA-HU-A4GC-01A","12:PPP1CC:110742653:-:4:TBC1D14:6923373:+:fusion","PPP1CC--TBC1D14","ENSG00000186298","ENSG00000132405",3.0,1.0,1.0,1.0,0.519,0.0]
["TCGA_STAD","TCGA-HU-A4GC-01A","8:PCMTD1:51898930:-:8:MFHAS1:8797491:-:reg","PCMTD1--MFHAS1","ENSG00000168300","ENSG00000147324",3.0,1.0,1.0,1.0,0.801,0.0]
["TCGA_STAD","TCGA-HU-A4GF-01A","1:ABCD3:94418588:+:1:AC097059.1:94333309:+:rev","ABCD3--AC097059.1","ENSG00000117528","ENSG00000226835",34.0,3.0,2.0,2.0,0.518505135126143,"NA"]
["TCGA_STAD","TCGA-HU-A4GH-01A","6:NUDT3:34392264:-:6:AL451165.2:34697159:+:strandcross","NUDT3--AL451165.2","ENSG00000272325","ENSG00000272288",2.0,1.0,1.0,1.0,0.754,0.00175284837862]
["TCGA_STAD","TCGA-HU-A4GH-01A","17:SKAP1:48430075:-:17:HOXB7:48608095:-:rev","SKAP1--HOXB7","ENSG00000141293","ENSG00000260027",4.0,1.0,1.0,1.0,0.421,"NA"]
["TCGA_STAD","TCGA-HU-A4GH-01A","1:DTL:212035942:+:1:RCOR3:211278117:+:rev","DTL--RCOR3","ENSG00000143476","ENSG00000117625",2.0,1.0,1.0,1.0,0.48,"NA"]
["TCGA_STAD","TCGA-HU-A4GJ-01A","12:CERS5:50167101:-:X:AIFM1:130131799:-:fusion","CERS5--AIFM1","ENSG00000139624","ENSG00000156709",1.0,1.0,1.0,1.0,0.861,0.0]
["TCGA_STAD","TCGA-HU-A4GQ-01A","7:STK17A:43583449:+:5:SYNPO:150656404:+:fusion","STK17A--SYNPO","ENSG00000164543","ENSG00000171992",2.0,1.0,1.0,1.0,0.951,0.0]
["TCGA_STAD","TCGA-HU-A4GT-01A","7:MAD1L1:2069194:-:10:GDI2:5800705:-:fusion","MAD1L1--GDI2","ENSG00000002822","ENSG00000057608",2.0,1.0,1.0,1.0,0.627,0.0]
["TCGA_STAD","TCGA-HU-A4GX-01A","16:ITFG1:47365788:-:16:PHKB:47675586:+:strandcross","ITFG1--PHKB","ENSG00000129636","ENSG00000102893",3.0,2.0,1.0,1.0,0.585,0.00359712230216]
["TCGA_STAD","TCGA-HU-A4H0-01A","2:BABAM2:28129380:+:2:MRPL33:27779433:+:rev","BABAM2--MRPL33","ENSG00000158019","ENSG00000243147",3.0,3.0,5.0,2.0,0.818,"NA"]
["TCGA_STAD","TCGA-HU-A4H3-01A","6:FGFR1OP:167000113:+:6:RMND1:151433230:-:strandcross","FGFR1OP--RMND1","ENSG00000213066","ENSG00000155906",2.0,1.0,1.0,1.0,0.998,0.0]
["TCGA_STAD","TCGA-HU-A4H5-01A","13:EPSTI1:42991978:-:13:DNAJC15:43078612:+:strandcross","EPSTI1--DNAJC15","ENSG00000133106","ENSG00000120675",3.0,5.0,2.0,2.0,0.299,0.0075]
["TCGA_STAD","TCGA-HU-A4H5-01A","3:RHOA:49411820:-:3:CTNNB1:41224021:+:strandcross","RHOA--CTNNB1","ENSG00000067560","ENSG00000168036",3.0,1.0,1.0,1.0,0.336,0.0075]
["TCGA_STAD","TCGA-HU-A4H5-01A","5:TPPP:693278:-:5:SLC12A7:1065478:-:rev","TPPP--SLC12A7","ENSG00000171368","ENSG00000113504",1.0,1.0,2.0,1.0,0.944,"NA"]
["TCGA_STAD","TCGA-HU-A4HB-01A","2:GKN2:68950126:-:17:ACOX1:75973785:-:fusion","GKN2--ACOX1","ENSG00000183607","ENSG00000161533",4.0,1.0,1.0,1.0,0.193,0.00622406639004]
["TCGA_STAD","TCGA-HU-A4HD-01A","3:CGGBP1:88149711:-:6:ORC3:87653116:+:fusion","CGGBP1--ORC3","ENSG00000163320","ENSG00000135336",7.0,1.0,1.0,1.0,0.947,0.0]
["TCGA_STAD","TCGA-HU-A4HD-01A","3:SEMA3F:50159734:+:3:RBM5:50113383:+:rev","SEMA3F--RBM5","ENSG00000001617","ENSG00000003756",3.0,1.0,1.0,1.0,0.865,"NA"]
["TCGA_STAD","TCGA-IN-8462-01A","4:RBM47:40466577:-:7:PSMG3:1569360:-:fusion","RBM47--PSMG3","ENSG00000163694","ENSG00000157778",4.0,1.0,1.0,1.0,0.858,0.0]
["TCGA_STAD","TCGA-IN-8663-01A","18:MBD2:54187714:-:21:AP000688.1:36075602:-:fusion","MBD2--AP000688.1","ENSG00000134046","ENSG00000230212",2.0,1.0,1.0,1.0,0.719,0.00596252129472]
["TCGA_STAD","TCGA-IN-8663-01A","5:PRELID2:145817894:-:5:GRXCR2:145859915:-:rev","PRELID2--GRXCR2","ENSG00000186314","ENSG00000204928",1.0,1.0,1.0,1.0,0.831,"NA"]
["TCGA_STAD","TCGA-IN-8663-01A","5:PRELID2:145817894:-:5:GRXCR2:145866728:-:rev","PRELID2--GRXCR2","ENSG00000186314","ENSG00000204928",12.0,1.0,1.0,1.0,0.792,"NA"]
["TCGA_STAD","TCGA-IN-A6RN-01A","1:Z98884.1:7827104:-:10:OIT3:72924229:+:fusion","Z98884.1--OIT3","ENSG00000236266","ENSG00000138315",3.0,1.0,1.0,1.0,0.846,0.0]
["TCGA_STAD","TCGA-IN-A6RN-01A","16:NQO1:69714964:-:16:NOB1:69742601:-:rev","NQO1--NOB1","ENSG00000181019","ENSG00000141101",2.0,1.0,1.0,1.0,0.597,"NA"]
["TCGA_STAD","TCGA-IN-A6RO-01A","12:FBXO21:117186477:-:12:TAOK3:118255655:-:rev","FBXO21--TAOK3","ENSG00000135108","ENSG00000135090",4.0,1.0,1.0,1.0,0.586,0.0]
["TCGA_STAD","TCGA-IN-A6RO-01A","19:GATAD2A:19406019:+:17:RETREG3:42587864:-:fusion","GATAD2A--RETREG3","ENSG00000167491","ENSG00000141699",4.0,1.0,1.0,1.0,0.884,0.0]
["TCGA_STAD","TCGA-IN-A6RS-01A","1:FAF1:50959767:-:1:CAPZA1:112654465:+:strandcross","FAF1--CAPZA1","ENSG00000185104","ENSG00000116489",1.0,1.0,1.0,1.0,0.808,0.0]
["TCGA_STAD","TCGA-IN-A6RS-01A","7:CLIP2:74289734:+:7:LIMK1:74085748:+:rev","CLIP2--LIMK1","ENSG00000106665","ENSG00000106683",7.0,1.0,1.0,1.0,0.614,"NA"]
["TCGA_STAD","TCGA-IN-A7NU-01A","6:PDSS2:107458990:-:1:TMOD4:151170103:-:fusion","PDSS2--TMOD4","ENSG00000164494","ENSG00000163157",2.0,1.0,1.0,1.0,0.996,0.0]
["TCGA_STAD","TCGA-IN-AB1V-01A","15:PIAS1:68086750:+:15:SMAD3:67164895:+:rev","PIAS1--SMAD3","ENSG00000033800","ENSG00000166949",2.0,1.0,1.0,1.0,0.944,"NA"]
["TCGA_STAD","TCGA-IN-AB1X-01A","14:SNX6:34575756:-:16:AC092378.1:58862035:+:fusion","SNX6--AC092378.1","ENSG00000129515","ENSG00000245768",10.0,1.0,1.0,1.0,0.281,0.0022539444027]
["TCGA_STAD","TCGA-IP-7968-01A","9:FOCAD:20658826:+:9:TTC39B:15189792:-:strandcross","FOCAD--TTC39B","ENSG00000188352","ENSG00000155158",3.0,1.0,1.0,1.0,0.866,6.37755102041E-4]
["TCGA_STAD","TCGA-KB-A6F7-01A","7:LINC01287:153405492:-:9:DENND4C:19352073:+:fusion","LINC01287--DENND4C","ENSG00000234722","ENSG00000137145",2.0,1.0,1.0,1.0,0.178,0.053164556962]
["TCGA_STAD","TCGA-KB-A93J-01A","15:AC046168.2:77572739:+:14:RAD51B:68291884:+:fusion","AC046168.2--RAD51B","ENSG00000259420","ENSG00000182185",11.0,1.0,1.0,1.0,0.254,0.00120336943442]
["TCGA_STAD","TCGA-KB-A93J-01A","15:FMN1:33008014:-:12:APAF1:98680277:+:fusion","FMN1--APAF1","ENSG00000248905","ENSG00000120868",4.0,1.0,1.0,1.0,0.476,0.0]
["TCGA_STAD","TCGA-KB-A93J-01A","19:SERTAD3:40444215:-:15:AC104574.2:61507240:-:fusion","SERTAD3--AC104574.2","ENSG00000167565","ENSG00000259616",15.0,1.0,1.0,1.0,0.691,0.0]
["TCGA_STAD","TCGA-MX-A666-01A","11:PRR5L:36403378:+:11:ELP4:31783393:+:rev","PRR5L--ELP4","ENSG00000135362","ENSG00000109911",2.0,1.0,1.0,1.0,0.468,0.0]
["TCGA_STAD","TCGA-MX-A666-01A","18:NEDD4L:58044708:+:22:GRAMD4:46626751:+:fusion","NEDD4L--GRAMD4","ENSG00000049759","ENSG00000075240",10.0,1.0,1.0,1.0,0.767,0.0]
["TCGA_STAD","TCGA-MX-A666-01A","2:GLS:190954818:+:2:MFSD6:190500015:+:rev","GLS--MFSD6","ENSG00000115419","ENSG00000151690",11.0,1.0,1.0,1.0,0.737,"NA"]
["TCGA_STAD","TCGA-R5-A7ZE-01B","11:CD44:35221732:+:11:CAT:34450988:+:rev","CD44--CAT","ENSG00000026508","ENSG00000121691",4.0,1.0,1.0,1.0,0.477,"NA"]
["TCGA_STAD","TCGA-R5-A7ZE-01B","5:DDX46:134758955:+:5:CAMLG:134750759:+:rev","DDX46--CAMLG","ENSG00000145833","ENSG00000164615",16.0,1.0,2.0,1.0,0.858157802798868,"NA"]
["TCGA_STAD","TCGA-RD-A7BS-01A","X:AC004554.2:11719622:-:10:FAM107B:14530515:-:fusion","AC004554.2--FAM107B","ENSG00000282840","ENSG00000065809",2.0,1.0,1.0,1.0,0.703,0.0]
["TCGA_STAD","TCGA-RD-A7BT-01A","17:WIPF2:40219517:+:X:CD99:2723314:+:fusion","WIPF2--CD99","ENSG00000171475","ENSG00000002586",48.0,1.0,1.0,1.0,0.856989252927317,0.0]
["TCGA_STAD","TCGA-RD-A7BT-01A","8:PVT1:127794734:+:8:NSMCE2:125357219:+:rev","PVT1--NSMCE2","ENSG00000249859","ENSG00000156831",34.0,3.0,2.0,2.0,0.890627090166468,0.0]
["TCGA_STAD","TCGA-RD-A8MW-01A","16:SNN:11668540:+:11:SERPING1:57599879:+:fusion","SNN--SERPING1","ENSG00000184602","ENSG00000149131",3.0,1.0,1.0,1.0,0.594,0.00109409190372]
["TCGA_STAD","TCGA-RD-A8MW-01A","20:FAM83D:38926925:+:20:TOP1:41061394:+:reg","FAM83D--TOP1","ENSG00000101447","ENSG00000198900",13.0,1.0,1.0,1.0,0.978,0.0]
["TCGA_STAD","TCGA-RD-A8MW-01A","16:LITAF:11575406:-:16:BCAR4:11821755:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",4.0,2.0,2.0,1.0,0.804,"NA"]
["TCGA_STAD","TCGA-RD-A8MW-01A","16:LITAF:11586886:-:16:BCAR4:11820297:-:rev","LITAF--BCAR4","ENSG00000189067","ENSG00000262117",16.0,12.0,10.0,9.0,0.8075855168773,"NA"]
["TCGA_STAD","TCGA-RD-A8MW-01A","3:POLR2H:184362146:+:3:EIF4G1:184324878:+:rev","POLR2H--EIF4G1","ENSG00000163882","ENSG00000114867",2.0,1.0,1.0,1.0,0.969,"NA"]
["TCGA_STAD","TCGA-RD-A8N4-01A","11:GAB2:78417646:-:1:SZT2:43429703:+:fusion","GAB2--SZT2","ENSG00000033327","ENSG00000198198",3.0,1.0,1.0,1.0,0.28,0.0]
["TCGA_STAD","TCGA-RD-A8N6-01A","14:BCL2L2:23308199:+:17:SDF2:28655483:-:fusion","BCL2L2--SDF2","ENSG00000129473","ENSG00000132581",2.0,1.0,1.0,1.0,0.215,0.00700700700701]
["TCGA_STAD","TCGA-RD-A8N6-01A","7:ANKIB1:92246519:+:7:CALCR:93574506:-:strandcross","ANKIB1--CALCR","ENSG00000001629","ENSG00000004948",2.0,1.0,1.0,1.0,0.797,0.0]
["TCGA_STAD","TCGA-RD-A8N9-01A","9:KDM4C:6990524:+:9:UHRF2:6420912:+:rev","KDM4C--UHRF2","ENSG00000107077","ENSG00000147854",2.0,1.0,1.0,1.0,0.595,"NA"]
["TCGA_STAD","TCGA-VQ-A8DU-01A","17:MNT:2400640:-:12:NOC4L:132150981:+:fusion","MNT--NOC4L","ENSG00000070444","ENSG00000184967",1.0,2.0,1.0,1.0,0.984,0.0]
["TCGA_STAD","TCGA-VQ-A8DU-01A","18:PHLPP1:62717259:+:18:KIAA1468:62211153:+:rev","PHLPP1--KIAA1468","ENSG00000081913","ENSG00000134444",1.0,1.0,1.0,1.0,0.972,"NA"]
["TCGA_STAD","TCGA-VQ-A8DV-01A","10:P4HA1:73068846:-:17:FAM104A:73227264:-:fusion","P4HA1--FAM104A","ENSG00000122884","ENSG00000133193",7.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_STAD","TCGA-VQ-A8DV-01A","20:CBFA2T2:33490301:+:7:PEG10:94663334:+:fusion","CBFA2T2--PEG10","ENSG00000078699","ENSG00000242265",6.0,1.0,1.0,1.0,0.324,0.00538793103448]
["TCGA_STAD","TCGA-VQ-A8DV-01A","3:CYB561D2:50352046:+:1:AL031428.1:23020551:-:fusion","CYB561D2--AL031428.1","ENSG00000114395","ENSG00000240553",7.0,1.0,1.0,1.0,0.181,0.0183189655172]
["TCGA_STAD","TCGA-VQ-A8DZ-01A","21:TMPRSS2:41488394:-:21:AP000688.1:36075602:-:reg","TMPRSS2--AP000688.1","ENSG00000184012","ENSG00000230212",3.0,1.0,1.0,1.0,0.204,0.00518134715026]
["TCGA_STAD","TCGA-VQ-A8E0-01A","14:TTC7B:90730075:-:14:AL365295.1:53687199:+:strandcross","TTC7B--AL365295.1","ENSG00000165914","ENSG00000237356",14.0,1.0,1.0,1.0,0.975,0.0]
["TCGA_STAD","TCGA-VQ-A8E0-01A","2:TRAF3IP1:238356080:+:2:ESPNL:238125270:+:rev","TRAF3IP1--ESPNL","ENSG00000204104","ENSG00000144488",2.0,1.0,1.0,1.0,0.61,"NA"]
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["TCGA_STAD","TCGA-VQ-A94O-01A","19:KIAA0355:34254614:+:19:AC011507.1:30872047:+:rev","KIAA0355--AC011507.1","ENSG00000166398","ENSG00000267081",45.0,1.0,1.0,1.0,0.899055846729528,0.0]
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["TCGA_THCA","TCGA-H2-A2K9-01A","8:TG:132972741:+:19:DPRX:53634531:+:fusion","TG--DPRX","ENSG00000042832","ENSG00000204595",67.0,1.0,1.0,1.0,0.805927242445981,0.00151057401813]
["TCGA_THCA","TCGA-H2-A2K9-01A","8:TG:132972741:+:19:DPRX:53636596:+:fusion","TG--DPRX","ENSG00000042832","ENSG00000204595",26.0,1.0,1.0,1.0,0.742074907814853,0.00453172205438]
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["TCGA_THCA","TCGA-KS-A4I3-01A","19:BORCS8:19178847:-:19:GMIP:19638482:-:rev","BORCS8--GMIP","ENSG00000254901","ENSG00000089639",2.0,1.0,1.0,1.0,0.778,"NA"]
["TCGA_THCA","TCGA-KS-A4I5-01A","16:SRRM2:2752846:+:19:RPL18:48617877:-:fusion","SRRM2--RPL18","ENSG00000167978","ENSG00000063177",2.0,1.0,1.0,1.0,0.77,0.00293255131965]
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["TCGA_THYM","TCGA-X7-A8DG-01A","6:PRSS16:27250806:+:1:MIB2:1626837:+:fusion","PRSS16--MIB2","ENSG00000112812","ENSG00000197530",2.0,1.0,1.0,1.0,0.999,0.0]
["TCGA_THYM","TCGA-XM-A8RF-01A","3:RPSA:39406764:+:3:AC114400.1:59118946:+:reg","RPSA--AC114400.1","ENSG00000168028","ENSG00000243295",2.0,1.0,1.0,1.0,0.941,0.0]
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["TCGA_UCEC","TCGA-B5-A1MW-01A","12:PTGES3:56687998:-:3:ARIH2:48973699:+:fusion","PTGES3--ARIH2","ENSG00000110958","ENSG00000177479",3.0,1.0,1.0,1.0,0.205,0.0236686390533]
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["TCGA_UCEC","TCGA-BK-A139-01A","2:RBM45:178120409:+:2:LINC01117:176655464:+:rev","RBM45--LINC01117","ENSG00000155636","ENSG00000224577",34.0,3.0,2.0,2.0,0.943913182273937,0.0140845070423]
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["TCGA_UCEC","TCGA-BK-A139-02A","3:TNFSF10:172523253:-:3:LINC02068:172574340:-:rev","TNFSF10--LINC02068","ENSG00000121858","ENSG00000223387",9.0,3.0,1.0,1.0,0.921,"NA"]
["TCGA_UCEC","TCGA-BK-A26L-01A","17:AATF:37021014:+:17:PPP1R1B:39635816:+:reg","AATF--PPP1R1B","ENSG00000275700","ENSG00000131771",2.0,2.0,1.0,1.0,0.741,0.0181818181818]
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["TCGA_UCEC","TCGA-BK-A4ZD-01A","17:RPL38:74204190:+:17:AC005358.2:12763718:-:strandcross","RPL38--AC005358.2","ENSG00000172809","ENSG00000265489",7.0,1.0,1.0,1.0,0.966,0.00406504065041]
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["TCGA_UCEC","TCGA-D1-A3JP-01A","11:AP2A2:959505:+:11:DRD4:640401:+:rev","AP2A2--DRD4","ENSG00000183020","ENSG00000069696",1.0,1.0,1.0,1.0,0.991,"NA"]
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["TCGA_UCEC","TCGA-D1-A3JQ-01A","10:ADK:74670269:+:10:LRMDA:76557209:+:reg","ADK--LRMDA","ENSG00000156110","ENSG00000148655",32.0,1.0,1.0,1.0,0.194667190432288,0.0291005291005]
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["TCGA_UCEC","TCGA-DF-A2KN-01A","19:ZSWIM4:13799921:+:19:C19orf53:13778052:+:rev","ZSWIM4--C19orf53","ENSG00000132003","ENSG00000104979",6.0,1.0,1.0,1.0,0.89,"NA"]
["TCGA_UCEC","TCGA-DF-A2KR-01A","19:MAP2K2:4110509:-:19:MYDGF:4658084:-:rev","MAP2K2--MYDGF","ENSG00000126934","ENSG00000074842",1.0,1.0,1.0,1.0,0.88,"NA"]
["TCGA_UCEC","TCGA-DF-A2KU-01A","4:RAB28:13484076:-:4:BOD1L1:13615502:-:rev","RAB28--BOD1L1","ENSG00000157869","ENSG00000038219",3.0,1.0,1.0,1.0,0.851,"NA"]
["TCGA_UCEC","TCGA-DF-A2L0-01A","3:ATG7:11309061:+:22:BCL2L13:17696141:+:fusion","ATG7--BCL2L13","ENSG00000197548","ENSG00000099968",6.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_UCEC","TCGA-DI-A2QT-01A","14:WARS:100337062:-:14:AL365295.1:53369452:+:strandcross","WARS--AL365295.1","ENSG00000140105","ENSG00000237356",8.0,1.0,1.0,1.0,0.959,0.0]
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["TCGA_UCEC","TCGA-E6-A8L9-01A","11:FAR1:13708079:+:11:MRVI1-AS1:10594117:+:rev","FAR1--MRVI1-AS1","ENSG00000197601","ENSG00000177112",2.0,1.0,1.0,1.0,0.927,0.00332225913621]
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["TCGA_UCEC","TCGA-E6-A8L9-01A","20:ASXL1:32366466:+:20:DEFB123:31450029:+:rev","ASXL1--DEFB123","ENSG00000171456","ENSG00000180424",2.0,1.0,1.0,1.0,0.964,"NA"]
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["TCGA_UCS","TCGA-N8-A4PP-01A","12:PCBP2:53471807:+:12:SP1:53406585:+:rev","PCBP2--SP1","ENSG00000197111","ENSG00000185591",4.0,1.0,1.0,1.0,0.845,"NA"]
["TCGA_UCS","TCGA-N8-A4PP-01A","5:TXNDC15:134893655:+:5:C5orf24:134857357:+:rev","TXNDC15--C5orf24","ENSG00000113621","ENSG00000181904",5.0,1.0,1.0,1.0,0.442,"NA"]
["TCGA_UCS","TCGA-N8-A4PQ-01A","11:CREBZF:85682717:-:11:NARS2:78493195:-:reg","CREBZF--NARS2","ENSG00000137504","ENSG00000137513",3.0,1.0,1.0,1.0,0.88,0.00259067357513]
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["TCGA_UCS","TCGA-N8-A4PQ-01A","17:NCOR1:16186554:-:17:AC099850.1:59117924:+:strandcross","NCOR1--AC099850.1","ENSG00000141027","ENSG00000224738",6.0,1.0,1.0,1.0,0.266,0.0181347150259]
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["TCGA_UCS","TCGA-N8-A4PQ-01A","4:CCSER1:90127831:+:4:AC097478.1:89719826:+:rev","CCSER1--AC097478.1","ENSG00000184305","ENSG00000251095",1.0,3.0,3.0,2.0,0.948,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","1:IPO9-AS1:201821961:-:1:COL16A1:31686279:-:reg","IPO9-AS1--COL16A1","ENSG00000231871","ENSG00000084636",3.0,1.0,1.0,1.0,0.994,0.0]
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["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:128010444:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",24.0,3.0,1.0,1.0,0.870681077630388,0.00299401197605]
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["TCGA_UCS","TCGA-N8-A56S-01A","17:NDEL1:8460160:+:17:AC135178.4:8338423:+:rev","NDEL1--AC135178.4","ENSG00000166579","ENSG00000266279",4.0,1.0,1.0,1.0,0.799,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","20:KIF3B:32277765:+:20:TM9SF4:32165295:+:rev","KIF3B--TM9SF4","ENSG00000101350","ENSG00000101337",10.0,1.0,1.0,1.0,0.974,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","5:AC008667.1:139721967:+:5:AC011405.1:139051002:+:rev","AC008667.1--AC011405.1","ENSG00000249526","ENSG00000249593",1.0,1.0,1.0,1.0,0.957,"NA"]
["TCGA_UCS","TCGA-N8-A56S-01A","8:PVT1:127989291:+:8:PCAT1:127006555:+:rev","PVT1--PCAT1","ENSG00000249859","ENSG00000253438",9.0,1.0,1.0,1.0,0.784,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","1:TBCE:235367504:+:1:C1orf186:206099655:+:rev","TBCE--C1orf186","ENSG00000116957","ENSG00000263961",2.0,1.0,1.0,1.0,0.945,0.0]
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["TCGA_UCS","TCGA-N9-A4PZ-01A","15:ARIH1:72475014:+:15:AC009690.2:72345386:+:rev","ARIH1--AC009690.2","ENSG00000166233","ENSG00000261460",3.0,1.0,1.0,1.0,0.653,"NA"]
["TCGA_UCS","TCGA-N9-A4PZ-01A","8:ATP6V1H:53832984:-:8:LYPLA1:54100939:-:rev","ATP6V1H--LYPLA1","ENSG00000047249","ENSG00000120992",1.0,1.0,1.0,1.0,0.886,"NA"]
["TCGA_UCS","TCGA-N9-A4Q1-01A","3:LMCD1-AS1:8603244:-:6:TRAF3IP2-AS1:111597838:+:fusion","LMCD1-AS1--TRAF3IP2-AS1","ENSG00000227110","ENSG00000231889",6.0,1.0,1.0,1.0,0.595,0.0123456790123]
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["TCGA_UCS","TCGA-N9-A4Q1-01A","2:BABAM2:27894684:+:2:GPN1:27647836:+:rev","BABAM2--GPN1","ENSG00000243147","ENSG00000198522",6.0,1.0,1.0,1.0,0.932,"NA"]
["TCGA_UCS","TCGA-N9-A4Q1-01A","2:MGAT4A:98663046:-:2:MITD1:99174016:-:rev","MGAT4A--MITD1","ENSG00000071073","ENSG00000158411",2.0,1.0,1.0,1.0,0.743,"NA"]
["TCGA_UCS","TCGA-N9-A4Q3-01A","4:APBB2:41214405:-:13:LINC00540:22274523:+:fusion","APBB2--LINC00540","ENSG00000163697","ENSG00000276476",5.0,1.0,1.0,1.0,0.627,0.00769230769231]
["TCGA_UCS","TCGA-N9-A4Q4-01A","22:USP18:18170920:+:22:TUBA8:18145656:+:rev","USP18--TUBA8","ENSG00000184979","ENSG00000183785",1.0,1.0,1.0,1.0,0.812,"NA"]
["TCGA_UCS","TCGA-N9-A4Q7-01A","11:RPS3:75400777:+:20:RPS21:62387321:+:fusion","RPS3--RPS21","ENSG00000149273","ENSG00000171858",2.0,1.0,1.0,1.0,0.993,0.0]
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["TCGA_UCS","TCGA-N9-A4Q8-01A","7:SNX8:2263230:-:7:CHST12:2432563:+:strandcross","SNX8--CHST12","ENSG00000106266","ENSG00000136213",2.0,1.0,1.0,1.0,0.54,0.0109090909091]
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["TCGA_UCS","TCGA-N9-A4Q8-01A","12:KRAS:25250764:-:12:AC019209.3:25783260:-:rev","KRAS--AC019209.3","ENSG00000133703","ENSG00000256686",2.0,1.0,1.0,1.0,0.827,"NA"]
["TCGA_UCS","TCGA-N9-A4Q8-01A","17:SEPT9:77281554:+:17:MFSD11:76738282:+:rev","SEPT9--MFSD11","ENSG00000184640","ENSG00000267168",2.0,1.0,1.0,1.0,0.672,"NA"]
["TCGA_UCS","TCGA-NA-A4QV-01A","10:FAM160B1:114833402:+:10:AL356476.1:108838953:+:rev","FAM160B1--AL356476.1","ENSG00000151553","ENSG00000223381",5.0,1.0,1.0,1.0,0.923,0.0]
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["TCGA_UCS","TCGA-NA-A4QV-01A","10:HSPA14:14854280:+:10:LINC00856:78330093:+:reg","HSPA14--LINC00856","ENSG00000187522","ENSG00000230417",4.0,1.0,1.0,1.0,0.938,0.0]
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["TCGA_UCS","TCGA-NA-A4QV-01A","2:PPP4R3B:55558775:-:11:SBF2-AS1:9807848:+:fusion","PPP4R3B--SBF2-AS1","ENSG00000275052","ENSG00000246273",3.0,1.0,1.0,1.0,0.536,0.0143266475645]
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["TCGA_UCS","TCGA-NA-A4QW-01A","7:WDR60:158879989:+:X:AL807742.1:21016227:-:fusion","WDR60--AL807742.1","ENSG00000126870","ENSG00000283380",2.0,1.0,1.0,1.0,0.716,0.0]
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["TCGA_UCS","TCGA-NA-A4QW-01A","8:RPL30:98044943:-:8:STK3:98526917:-:rev","RPL30--STK3","ENSG00000156482","ENSG00000104375",2.0,1.0,1.0,1.0,0.627,"NA"]
["TCGA_UCS","TCGA-NA-A4QY-01A","22:RRP7A:42515151:-:4:AC104078.1:36272947:+:fusion","RRP7A--AC104078.1","ENSG00000189306","ENSG00000247193",11.0,1.0,1.0,1.0,0.485,0.00591715976331]
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["TCGA_UCS","TCGA-NA-A4R0-01A","10:PRPF18:13587152:+:10:LINC00708:8260950:-:strandcross","PRPF18--LINC00708","ENSG00000165630","ENSG00000232170",8.0,1.0,1.0,1.0,0.989,0.0]
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["TCGA_UCS","TCGA-NA-A4R1-01A","17:TMC6:78117269:-:17:AC004707.1:50397240:+:strandcross","TMC6--AC004707.1","ENSG00000141524","ENSG00000253102",3.0,1.0,1.0,1.0,0.902,0.00215053763441]
["TCGA_UCS","TCGA-NA-A4R1-01A","20:ZNF341:33741012:+:20:AL034549.1:33990013:-:strandcross","ZNF341--AL034549.1","ENSG00000131061","ENSG00000275784",6.0,1.0,1.0,1.0,0.884,0.00215053763441]
["TCGA_UCS","TCGA-NA-A4R1-01A","20:ZNF341:33741012:+:20:RALY-AS1:33983596:-:strandcross","ZNF341--RALY-AS1","ENSG00000131061","ENSG00000228265",6.0,1.0,1.0,1.0,0.679,0.00860215053763]
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["TCGA_UCS","TCGA-NA-A4R1-01A","7:KMT2E:105090273:+:7:LHFPL3:104736675:+:rev","KMT2E--LHFPL3","ENSG00000005483","ENSG00000187416",39.0,1.0,1.0,1.0,0.790431370150611,"NA"]
["TCGA_UCS","TCGA-NA-A5I1-01A","17:TBC1D16:79942060:-:17:AATK-AS1:81178918:+:strandcross","TBC1D16--AATK-AS1","ENSG00000167291","ENSG00000225180",9.0,1.0,1.0,1.0,0.711,0.00554016620499]
["TCGA_UCS","TCGA-NA-A5I1-01A","1:TBCE:235414618:+:1:SLC35F3:234231417:+:rev","TBCE--SLC35F3","ENSG00000116957","ENSG00000183780",2.0,1.0,1.0,1.0,0.278,0.0193905817175]
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["TCGA_UCS","TCGA-ND-A4W6-01A","X:AC234772.2:45849375:-:22:AC002472.1:21042703:+:fusion","AC234772.2--AC002472.1","ENSG00000231566","ENSG00000226872",4.0,1.0,1.0,1.0,0.962,0.0]
["TCGA_UCS","TCGA-ND-A4W6-01A","12:RNF41:56221760:-:12:GLS2:56472195:-:rev","RNF41--GLS2","ENSG00000181852","ENSG00000135423",2.0,1.0,1.0,1.0,0.99,"NA"]
["TCGA_UCS","TCGA-ND-A4W6-01A","19:BORCS8:19180686:-:19:SUGP1:19280291:-:rev","BORCS8--SUGP1","ENSG00000064489","ENSG00000105705",2.0,2.0,1.0,1.0,0.98,"NA"]
["TCGA_UCS","TCGA-ND-A4WF-01A","12:AC069208.1:24368563:-:12:SLC15A5:16239867:-:reg","AC069208.1--SLC15A5","ENSG00000255864","ENSG00000188991",5.0,1.0,1.0,1.0,1.0,0.0]
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["TCGA_UCS","TCGA-ND-A4WF-01A","17:ACTG1:81511903:-:17:NPLOC4:81600427:-:rev","ACTG1--NPLOC4","ENSG00000184009","ENSG00000182446",10.0,1.0,1.0,1.0,0.959,"NA"]
["TCGA_UCS","TCGA-NF-A4WU-01A","1:ENAH:225554906:-:12:AC007406.4:204018:+:fusion","ENAH--AC007406.4","ENSG00000154380","ENSG00000256577",117.0,1.0,1.0,1.0,0.924233742112172,0.0]
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["TCGA_UCS","TCGA-NF-A5CP-01A","7:KDM7A:140119113:-:7:DENND2A:140602542:-:rev","KDM7A--DENND2A","ENSG00000006459","ENSG00000146966",2.0,1.0,1.0,1.0,0.984,"NA"]
["TCGA_UCS","TCGA-NG-A4VU-01A","6:RPS12:132817061:+:1:HDGF:156743878:-:fusion","RPS12--HDGF","ENSG00000112306","ENSG00000143321",2.0,1.0,1.0,1.0,0.858,0.0]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127794734:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",72.0,1.0,1.0,1.0,0.911027651675272,0.00471698113208]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127796008:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",3.0,1.0,1.0,1.0,0.765,0.00471698113208]
["TCGA_UCS","TCGA-NG-A4VW-01A","8:PVT1:127796071:+:8:AP001208.2:101412208:-:strandcross","PVT1--AP001208.2","ENSG00000249859","ENSG00000254084",5.0,1.0,1.0,1.0,0.75,0.00471698113208]
["TCGA_UCS","TCGA-QM-A5NM-01A","2:C2orf48:10142375:+:9:C9orf3:95086682:+:fusion","C2orf48--C9orf3","ENSG00000163009","ENSG00000148120",3.0,1.0,1.0,1.0,0.667,0.00414937759336]
["TCGA_UVM","TCGA-V4-A9EI-01A","17:ABR:1050050:-:17:DDX42:63805071:+:strandcross","ABR--DDX42","ENSG00000159842","ENSG00000198231",1.0,1.0,1.0,1.0,0.701,0.00898203592814]
["TCGA_UVM","TCGA-V4-A9EK-01A","12:TMEM132B:125186866:+:12:AC078923.1:75631314:-:strandcross","TMEM132B--AC078923.1","ENSG00000139364","ENSG00000258077",3.0,1.0,1.0,1.0,0.93,0.0]
["TCGA_UVM","TCGA-V4-A9EO-01A","8:AGPAT5:6708887:+:8:MCPH1:6477594:+:rev","AGPAT5--MCPH1","ENSG00000155189","ENSG00000147316",2.0,2.0,1.0,1.0,0.897,"NA"]
["TCGA_UVM","TCGA-V4-A9EV-01A","14:TRAJ49:22489543:+:14:TRAV41:22320408:+:rev","TRAJ49--TRAV41","ENSG00000211840","ENSG00000211820",1.0,1.0,1.0,1.0,0.803,"NA"]
["TCGA_UVM","TCGA-VD-A8K7-01B","5:AC109466.1:165007412:+:5:LINC01470:152684785:-:strandcross","AC109466.1--LINC01470","ENSG00000241956","ENSG00000249484",17.0,1.0,1.0,1.0,0.752487176983861,0.0]
["TCGA_UVM","TCGA-VD-A8KA-01B","4:KLHL8:87220418:-:1:AMY2B:103565435:+:fusion","KLHL8--AMY2B","ENSG00000145332","ENSG00000240038",1.0,1.0,1.0,1.0,0.977,0.0]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39889055:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",45.0,1.0,1.0,1.0,0.849572226801768,0.0102739726027]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39891379:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",5.0,1.0,1.0,1.0,0.328,0.0239726027397]
["TCGA_UVM","TCGA-VD-A8KG-01A","6:RNF144B:18399699:+:6:AL590999.1:39891763:-:strandcross","RNF144B--AL590999.1","ENSG00000137393","ENSG00000235033",2.0,1.0,1.0,1.0,0.856,0.0102739726027]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:ADAT2:143450563:-:6:AIG1:143187629:+:strandcross","ADAT2--AIG1","ENSG00000189007","ENSG00000146416",3.0,1.0,1.0,1.0,0.91,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:CCNC:99568496:-:6:HDAC2-AS2:114088937:+:strandcross","CCNC--HDAC2-AS2","ENSG00000112237","ENSG00000228624",6.0,1.0,1.0,1.0,0.995,0.0]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:SERINC1:122471699:-:6:AL445259.1:123462247:+:strandcross","SERINC1--AL445259.1","ENSG00000111897","ENSG00000235535",12.0,1.0,1.0,1.0,0.443,0.019801980198]
["TCGA_UVM","TCGA-VD-A8KJ-01A","6:VTA1:142170421:+:6:AL589740.1:97969406:+:rev","VTA1--AL589740.1","ENSG00000009844","ENSG00000271860",2.0,1.0,1.0,1.0,0.239,0.019801980198]
["TCGA_UVM","TCGA-YZ-A983-01A","11:ESRRA:64307504:+:11:STIP1:64193078:+:rev","ESRRA--STIP1","ENSG00000173153","ENSG00000168439",1.0,1.0,1.0,1.0,0.927,"NA"]
["TCGA_UVM","TCGA-YZ-A984-01A","17:AC005899.4:32350326:+:1:SSU72:1545002:-:fusion","AC005899.4--SSU72","ENSG00000265794","ENSG00000160075",2.0,1.0,1.0,1.0,0.997,0.0]

{"sheet":"Novel_recurrent_fusions","index":3,"n_rows":159,"n_cols":3,"rows_kept":159,"cut":false,"hidden":false,"merged":[]}
["This sheet shows all novel recurrent fusions found by DEEEPST"]
[]
["TCGA_Project","fusion","N"]
["TCGA_LIHC","AS3MT--CYP17A1-AS1",2.0]
["TCGA_LGG","ACSL1--AL583859.2",2.0]
["TCGA_SKCM","TYR--MXI1",2.0]
["TCGA_STAD","TACC2--PLPP4",2.0]
["TCGA_LIHC","CYP2E1--MTG1",2.0]
["TCGA_OV","CCNY--AL158834.2",2.0]
["TCGA_LUSC","NET1--AKR1C3",2.0]
["TCGA_STAD","RBM17--FAM208B",2.0]
["TCGA_OV","SAMD8--LRMDA",2.0]
["TCGA_LUAD","DST--AP005135.1",2.0]
["TCGA_THCA","TG--AP005135.1",2.0]
["TCGA_LGG","TYR--AC027779.1",2.0]
["TCGA_LGG","FADS2--AP003716.1",2.0]
["TCGA_SKCM","AP001528.1--PPP6R3",2.0]
["TCGA_ESCA","SHANK2--AP005019.1",2.0]
["TCGA_LUAD","AMBRA1--TMEM9B-AS1",2.0]
["TCGA_LUSC","GCN1--RPLP0",2.0]
["TCGA_OV","SLC38A1--AC025031.1",3.0]
["TCGA_BRCA","SLC11A2--CSRNP2",2.0]
["TCGA_ACC","HNRNPA1--AC023794.2",2.0]
["TCGA_LUAD","CTDSP2--AC084033.3",3.0]
["TCGA_SARC","CPSF6--LINC01481",2.0]
["TCGA_SARC","CTDSP2--AC024909.1",2.0]
["TCGA_SKCM","LRCH1--AL138686.1",2.0]
["TCGA_ESCA","TBC1D4--LMO7-AS1",2.0]
["TCGA_PRAD","ABCC4--GPC6",2.0]
["TCGA_THCA","TG--IGHV7-81",4.0]
["TCGA_BRCA","HECTD1--AL139353.1",3.0]
["TCGA_OV","NPAS3--ARHGAP5",2.0]
["TCGA_PRAD","AL121790.1--AL132857.2",2.0]
["TCGA_THCA","PTCSC3--SFTA3",3.0]
["TCGA_PRAD","TTC6--AL162464.1",3.0]
["TCGA_BRCA","ZFP36L1--ACTN1",2.0]
["TCGA_LIHC","ELMSAN1--LINC02274",2.0]
["TCGA_SKCM","PMEL--NDUFB1",2.0]
["TCGA_PRAD","AP001122.1--SLC30A4",2.0]
["TCGA_BLCA","ALDH1A2--ADAM10",2.0]
["TCGA_KIRC","ANXA2--ICE2",2.0]
["TCGA_BRCA","HERC1--AC087632.1",2.0]
["TCGA_OV","CLEC16A--CIITA",2.0]
["TCGA_STAD","LITAF--ZC3H7A",2.0]
["TCGA_STAD","GSPT1--NPIPB2",2.0]
["TCGA_LAML","EIF4A1--ATP6V0C",2.0]
["TCGA_BRCA","CDH11--LINC00922",3.0]
["TCGA_STAD","ZFP90--NFATC3",2.0]
["TCGA_BRCA","IST1--AC009097.1",2.0]
["TCGA_OV","QRICH1--MYH4",2.0]
["TCGA_STAD","TOP2A--SMARCE1",2.0]
["TCGA_BRCA","RABEP1--AC087500.1",2.0]
["TCGA_BLCA","LINC00511--SLC39A11",2.0]
["TCGA_BRCA","AFMID--SEPT9",2.0]
["TCGA_BRCA","BORCS8-MEF2B--LINC01255",2.0]
["TCGA_LUAD","QSER1--AC016493.1",2.0]
["TCGA_LIHC","DNMT1--AC011511.2",2.0]
["TCGA_BLCA","F11R--AC011472.1",2.0]
["TCGA_OV","ILF3--FARSA-AS1",3.0]
["TCGA_BRCA","AC123912.1--USHBP1",2.0]
["TCGA_LUSC","URI1--AC008991.1",2.0]
["TCGA_LUAD","ANKRD27--AC020912.1",2.0]
["TCGA_LUAD","ZNF100--AC008555.5",2.0]
["TCGA_LGG","AC011445.1--NPHS1",2.0]
["TCGA_THCA","AKT2--SERTAD1",2.0]
["TCGA_OV","HSPA8--GRIK5",2.0]
["TCGA_OV","C3--GPR108",2.0]
["TCGA_TGCT","SRM--EXOSC10",2.0]
["TCGA_PCPG","APIP--AL162258.2",2.0]
["TCGA_LUSC","XPR1--OVAAL",2.0]
["TCGA_OV","XPR1--OVAAL",3.0]
["TCGA_OV","GNB1--CFAP74",2.0]
["TCGA_ESCA","GNB1--CFAP74",2.0]
["TCGA_HNSC","LAMB3--AL031316.1",2.0]
["TCGA_BRCA","OSBPL9--AC104170.1",2.0]
["TCGA_BRCA","SLC25A33--AL034417.2",2.0]
["TCGA_BRCA","LINC01725--DDAH1",2.0]
["TCGA_BLCA","PLPBP--ENO1",2.0]
["TCGA_BLCA","ABCD3--AC097059.1",2.0]
["TCGA_BRCA","XRN2--KIZ",2.0]
["TCGA_COAD","SLC52A3--LINC01726",2.0]
["TCGA_LUAD","TOP1--AL034550.1",2.0]
["TCGA_OV","CLIP1--NCOA3",2.0]
["TCGA_OV","CSNK2A1--SCRT2",2.0]
["TCGA_BRCA","BRWD1--HMGN1",2.0]
["TCGA_SARC","TENM3--LINC01886",2.0]
["TCGA_LUAD","CPS1--LANCL1-AS1",2.0]
["TCGA_UCEC","BABAM2--GPN1",2.0]
["TCGA_OV","KIDINS220--MBOAT2",2.0]
["TCGA_LUSC","RASA2--PXYLP1",2.0]
["TCGA_LIHC","PAQR9-AS1--AC021074.3",2.0]
["TCGA_PRAD","AC097478.1--PDCD10",2.0]
["TCGA_OV","MECOM--PHC3",3.0]
["TCGA_BLCA","TNFSF10--LINC02068",2.0]
["TCGA_BRCA","USP13--NDUFB5",2.0]
["TCGA_LUSC","LINC01206--SOX2-OT",2.0]
["TCGA_OV","MECOM--CLDN16",2.0]
["TCGA_OV","HERPUD1--AC125608.1",2.0]
["TCGA_BRCA","PPP4R3A--AC026167.1",2.0]
["TCGA_SKCM","SAMMSON--MITF",3.0]
["TCGA_SKCM","OGG1--MTMR14",2.0]
["TCGA_OV","USP46--SCFD2",2.0]
["TCGA_GBM","KIAA1211--AC098868.1",2.0]
["TCGA_LGG","PIP4K2A--IGFBP7-AS1",2.0]
["TCGA_LIHC","ALB--AC053527.1",2.0]
["TCGA_LGG","CTBP1--AC097478.1",2.0]
["TCGA_BLCA","CCSER1--AC097478.1",2.0]
["TCGA_LUSC","CCSER1--AC097478.1",2.0]
["TCGA_OV","CCSER1--AC097478.1",2.0]
["TCGA_STAD","SLC12A2--CCDC192",2.0]
["TCGA_LIHC","LINC01843--UBE2B",2.0]
["TCGA_STAD","PRELID2--GRXCR2",2.0]
["TCGA_UCS","RICTOR--LINC02217",2.0]
["TCGA_LIHC","CYP2E1--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","SLC30A4--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","TTC3--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","SCHLAP1--C1QTNF3-AMACR",10.0]
["TCGA_PRAD","NAALADL2--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","DANCR--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","MATR3--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","TRPV6--C1QTNF3-AMACR",2.0]
["TCGA_PRAD","PCA3--C1QTNF3-AMACR",2.0]
["TCGA_BRCA","FGF10--AC093297.2",3.0]
["TCGA_BLCA","PLPP1--SLC38A9",2.0]
["TCGA_LUAD","RHOBTB3--RFESD",2.0]
["TCGA_STAD","CD24--CRYBG1",2.0]
["TCGA_LUSC","SGK1--AL078590.3",3.0]
["TCGA_LIHC","BICDL1--AL109933.1",2.0]
["TCGA_GBM","PACRG--AL137005.1",2.0]
["TCGA_BRCA","CASC15--CDKAL1",3.0]
["TCGA_BLCA","CDKAL1--NBAT1",2.0]
["TCGA_KIRC","CSNK2B--APOM",2.0]
["TCGA_OV","TRAM2--SUPT3H",2.0]
["TCGA_UCEC","IMMP2L--AC092167.1",2.0]
["TCGA_BRCA","AC092167.1--IMMP2L",3.0]
["TCGA_PRAD","AL121790.1--ETV1",3.0]
["TCGA_BRCA","GGCT--AC004691.1",2.0]
["TCGA_GBM","TMED4--AC005537.1",2.0]
["TCGA_GBM","EGFR--AC074351.1",3.0]
["TCGA_LGG","EGFR--AC074351.1",2.0]
["TCGA_GBM","EGFR--AC073324.2",2.0]
["TCGA_OV","TRPS1--MIOS",2.0]
["TCGA_COAD","MICALL2--TMEM120A",2.0]
["TCGA_TGCT","PPFIA1--AC003092.1",2.0]
["TCGA_LGG","SETD1A--AC002429.2",2.0]
["TCGA_SKCM","SLC25A13--SEM1",2.0]
["TCGA_OV","SLC25A13--SEM1",2.0]
["TCGA_BRCA","GRHL2--AP001330.1",2.0]
["TCGA_UCEC","MAL2--COLEC10",2.0]
["TCGA_LUSC","CASC19--CASC8",3.0]
["TCGA_BRCA","PTK2--AC040970.1",2.0]
["TCGA_OV","IQANK1--ZNF707",2.0]
["TCGA_BRCA","KAT6A--AC124067.1",2.0]
["TCGA_LUSC","NSD3--DDHD2",3.0]
["TCGA_ESCA","TMEM64--AC103409.1",2.0]
["TCGA_BLCA","NUP188--LRRC8A",2.0]
["TCGA_SKCM","PMEL--PAEP",2.0]
["TCGA_BLCA","FOCAD--CDKN2B-AS1",2.0]
["TCGA_SARC","ATRX--MIR325HG",2.0]

{"sheet":"Marker fusions","index":4,"n_rows":3554,"n_cols":4,"rows_kept":3554,"cut":false,"hidden":false,"merged":[]}
["List of TCGA marker papers: "]
["ACC","https://doi.org/10.1016/j.ccell.2016.04.002"]
["CESC","https://doi.org/10.1038/nature21386"]
["CHOL","https://doi.org/10.1016/j.celrep.2017.02.033"]
["ESCA","https://doi.org/10.1038/nature20805"]
["GBM","https://doi.org/10.1016/j.cell.2013.09.034"]
["HNSC","https://doi.org/10.1038/nature14129"]
["KIRC","https://doi.org/10.1038/nature12222"]
["KIRP","https://doi.org/10.1056/NEJMoa1505917"]
["LAML","https://doi.org/10.1056/NEJMoa1301689"]
["LGG","https://doi.org/10.1056/NEJMoa1402121"]
["LUAD","https://doi.org/10.1038/nature13385"]
["PCPG","https://doi.org/10.1016/j.ccell.2017.01.001"]
["PRAD","https://doi.org/10.1016/j.cell.2015.10.025"]
["SARC","https://doi.org/10.1016/j.cell.2017.10.014"]
["SKCM","https://doi.org/10.1016/j.cell.2015.05.044"]
["STAD","https://doi.org/10.1038/nature13480"]
["THCA","https://doi.org/10.1016/j.cell.2014.09.050"]
[]
["*A fusion detected by DEEPEST-Fusion is flagged as a marker fusion reported in one of the TCGA papers, if either the gene-name pair or its exact coordinates is found in the marker fusions list. "]
["*When the list of marker fusions is based on hg19, the coordiantes of DEEPEST fusions are converted into hg19 coordinates using the LiftOver tool in UCSC genome browser. "]
[]
[]
["TCGA_Project","Sample","fusion","junction"]
["TCGA_ACC","TCGA-OR-A5J1-01A","PARP8--ANKRD55","5:PARP8:50829961:+:5:ANKRD55:56116782:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5J1-01A","DAB2--ARSB","5:DAB2:39392365:-:5:ARSB:78969192:-:rev"]
["TCGA_ACC","TCGA-OR-A5J1-01A","TBCD--GLIPR2","17:TBCD:82884202:+:9:GLIPR2:36147786:+:fusion"]
["TCGA_ACC","TCGA-OR-A5J1-01A","CWC27--PLPP1","5:CWC27:64885546:+:5:PLPP1:55426039:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5J7-01A","SCMH1--CA6","1:SCMH1:41033983:-:1:CA6:8949263:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5J7-01A","PEBP1--DENND4B","12:PEBP1:118139551:+:1:DENND4B:153936188:-:fusion"]
["TCGA_ACC","TCGA-OR-A5J7-01A","KIF1B--FAM58A","1:KIF1B:10232434:+:X:FAM58A:153596187:-:fusion"]
["TCGA_ACC","TCGA-OR-A5J8-01A","EIF4H--AARS2","7:EIF4H:74174442:+:6:AARS2:44312263:-:fusion"]
["TCGA_ACC","TCGA-OR-A5J8-01A","CAPRIN1--CD151","11:CAPRIN1:34090678:+:11:CD151:838133:+:rev"]
["TCGA_ACC","TCGA-OR-A5J8-01A","NFKBIE--FBXO9","6:NFKBIE:44264982:-:6:FBXO9:53071057:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5J8-01A","AARS2--SPATS1","6:AARS2:44310299:-:6:SPATS1:44360446:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JA-01A","PAH--METAP2","12:PAH:102894735:-:12:METAP2:95512801:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JJ-01A","RALGAPA2--ZNFX1","20:RALGAPA2:20712375:-:20:ZNFX1:49239300:-:rev"]
["TCGA_ACC","TCGA-OR-A5JL-01A","GTF2A1--POMT2","14:GTF2A1:81220489:-:14:POMT2:77301249:-:reg"]
["TCGA_ACC","TCGA-OR-A5JM-01A","TPCN1--AC025575.2","12:TPCN1:113287094:+:12:AC025575.2:71047679:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JP-01A","LDLR--AC011511.1","19:LDLR:11089615:+:19:AC011511.1:10305952:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JP-01A","MSI2--CA10","17:MSI2:57529724:+:17:CA10:52072393:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JP-01A","RECQL5--CACNA1G","17:RECQL5:75658298:-:17:CACNA1G:50590471:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JP-01A","SCAMP4--COX8A","19:SCAMP4:1918283:+:11:COX8A:63976225:+:fusion"]
["TCGA_ACC","TCGA-OR-A5JP-01A","LDLR--ZGLP1","19:LDLR:11089615:+:19:ZGLP1:10305952:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JS-01A","TLK2--CEP112","17:TLK2:62608148:+:17:CEP112:65689218:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JS-01A","NSD1--EFNA5","5:NSD1:177192019:+:5:EFNA5:107381376:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JV-01A","ADGRV1--CLPTM1L","5:ADGRV1:90985522:+:5:CLPTM1L:1318453:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5JY-01A","HPS4--CABIN1","22:HPS4:26479265:-:22:CABIN1:24164400:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JY-01A","UBE2J1--CFAP206","6:UBE2J1:89352539:-:6:CFAP206:87464020:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JY-01A","CREB3L2--CPA2","7:CREB3L2:138001604:-:7:CPA2:130282104:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5JZ-01A","SPEF2--C5orf42","5:SPEF2:35659207:+:5:C5orf42:37224333:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5K2-01A","NFIC--SPATA33","19:NFIC:3359685:+:16:SPATA33:89669286:+:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","TXNDC11--BAMBI","16:TXNDC11:11742477:-:10:BAMBI:28681258:+:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","MSH5-SAPCD1--BSCL2","6:MSH5-SAPCD1:31759177:+:11:BSCL2:62692797:-:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","TXNDC11--CIB4","16:TXNDC11:11736017:-:2:CIB4:26640567:-:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","SIK3--CTNNBIP1","11:SIK3:117098143:-:1:CTNNBIP1:9850776:-:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","SENP2--MSH5-SAPCD1","3:SENP2:185599024:+:6:MSH5-SAPCD1:31758766:+:fusion"]
["TCGA_ACC","TCGA-OR-A5K5-01A","RAB8A--PLVAP","19:RAB8A:16112025:+:19:PLVAP:17366195:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5KO-01A","NT5DC1--SLC35F1","6:NT5DC1:116117945:+:6:SLC35F1:118266995:+:reg"]
["TCGA_ACC","TCGA-OR-A5KT-01A","PYM1--SLC16A7","12:PYM1:55903387:-:12:SLC16A7:59779423:+:strandcross"]
["TCGA_ACC","TCGA-OR-A5KT-01A","SPATS2--TSPAN8","12:SPATS2:49514613:+:12:TSPAN8:71139848:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5KV-01A","REPS2--APOO","X:REPS2:16947134:+:X:APOO:23880952:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5KV-01A","KDM6A--FUNDC1","X:KDM6A:44873987:+:X:FUNDC1:44527365:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5KW-01A","BRMS1L--ZNF839","14:BRMS1L:35834923:+:14:ZNF839:102338816:+:reg"]
["TCGA_ACC","TCGA-OR-A5KX-01A","FKBP8--HAUS8","19:FKBP8:18541679:-:19:HAUS8:17073335:-:reg"]
["TCGA_ACC","TCGA-OR-A5KX-01A","ARHGAP23--RPL23","17:ARHGAP23:38482678:+:17:RPL23:38853105:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5KY-01A","FHOD3--ESRRB","18:FHOD3:36372744:+:14:ESRRB:76482016:+:fusion"]
["TCGA_ACC","TCGA-OR-A5KY-01A","CHD3--RAD51C","17:CHD3:7893935:+:17:RAD51C:58709859:+:reg"]
["TCGA_ACC","TCGA-OR-A5KZ-01A","VPS41--CEP41","7:VPS41:38754702:-:7:CEP41:130428018:-:rev"]
["TCGA_ACC","TCGA-OR-A5L6-01A","CLK1--NAPRT","2:CLK1:200854616:-:8:NAPRT:143577943:-:fusion"]
["TCGA_ACC","TCGA-OR-A5LH-01A","DCLK2--LRBA","4:DCLK2:150102812:+:4:LRBA:150325898:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5LM-01A","CMTR1--SMIM13","6:CMTR1:37473601:+:6:SMIM13:11134403:+:rev"]
["TCGA_ACC","TCGA-OR-A5LO-01A","WRAP53--AHCY","17:WRAP53:7689701:+:20:AHCY:34281165:-:fusion"]
["TCGA_ACC","TCGA-OU-A5PI-01A","PLCB1--WTIP","20:PLCB1:8757178:+:19:WTIP:34490376:+:fusion"]
["TCGA_ACC","TCGA-P6-A5OF-01A","YPEL3--EXD3","16:YPEL3:30095252:-:9:EXD3:137324143:-:fusion"]
["TCGA_ACC","TCGA-P6-A5OF-01A","DCP2--IL17B","5:DCP2:112992770:+:5:IL17B:149377025:-:strandcross"]
["TCGA_ACC","TCGA-OR-A5J1-01A","PPP1R2--APOD","3:PPP1R2:195542904:APOD:195569135:rev:-"]
["TCGA_ACC","TCGA-OR-A5J7-01A","PRX--BLVRB","19:PRX:40398620:BLVRB:40448046:rev:-"]
["TCGA_ACC","TCGA-OR-A5J7-01A","AP2A2--DRD4","11:AP2A2:977224:DRD4:639433:rev:+"]
["TCGA_ACC","TCGA-OR-A5J7-01A","ITGA9--GOLGA4","3:ITGA9:37629336:GOLGA4:37302185:rev:+"]
["TCGA_ACC","TCGA-OR-A5J7-01A","PGAP1--HSPD1","2:PGAP1:196885424:HSPD1:197497392:rev:-"]
["TCGA_ACC","TCGA-OR-A5J7-01A","IFNAR1--IL10RB","21:IFNAR1:33325131:IL10RB:33288104:rev:+"]
["TCGA_ACC","TCGA-OR-A5J7-01A","RCOR1--PPP2R5C","14:RCOR1:102681978:PPP2R5C:101856686:rev:+"]
["TCGA_ACC","TCGA-OR-A5J7-01A","MKL1--SLC25A17","22:MKL1:40463221:SLC25A17:40779125:rev:-"]
["TCGA_ACC","TCGA-OR-A5J9-01A","NCS1--GPR107","9:NCS1:130172727:GPR107:130127483:rev:+"]
["TCGA_ACC","TCGA-OR-A5JE-01A","UBXN1--BSCL2","11:UBXN1:62677518:BSCL2:62692797:rev:-"]
["TCGA_ACC","TCGA-OR-A5JM-01A","HDAC7--VDR","12:HDAC7:47819767:VDR:47865177:rev:-"]
["TCGA_ACC","TCGA-OR-A5JT-01A","PHF20--SPAG4","20:PHF20:35899648:SPAG4:35619195:rev:+"]
["TCGA_ACC","TCGA-OR-A5JY-01A","MGA--NUSAP1","15:MGA:41699159:NUSAP1:41349098:rev:+"]
["TCGA_ACC","TCGA-OR-A5JZ-01A","PRKAR2A--SLC25A20","3:PRKAR2A:48807649:SLC25A20:48892072:rev:-"]
["TCGA_ACC","TCGA-OR-A5K5-01A","BRK1--FANCD2","3:BRK1:10115819:FANCD2:10093285:rev:+"]
["TCGA_ACC","TCGA-OR-A5K5-01A","DNM2--QTRT1","19:DNM2:10718403:QTRT1:10707302:rev:+"]
["TCGA_ACC","TCGA-OR-A5K5-01A","MED16--R3HDM4","19:MED16:871926:R3HDM4:897540:rev:-"]
["TCGA_ACC","TCGA-OR-A5KU-01A","RNF41--CS","12:RNF41:56213958:CS:56276195:rev:-"]
["TCGA_ACC","TCGA-OR-A5KX-01A","DLST--YLPM1","14:DLST:74894409:YLPM1:74797580:rev:+"]
["TCGA_ACC","TCGA-OR-A5KY-01A","NCOR2--SCARB1","12:NCOR2:124398119:SCARB1:124778586:rev:-"]
["TCGA_ACC","TCGA-OR-A5LB-01A","FAM19A4--TMF1","3:FAM19A4:68880730:TMF1:69048562:rev:-"]
["TCGA_ACC","TCGA-OR-A5LD-01A","GANAB--AP001458.2","11:GANAB:62639627:AP001458.2:62663333:rev:-"]
["TCGA_ACC","TCGA-OR-A5LO-01A","CELF1--FNBP4","11:CELF1:47483453:FNBP4:47720086:rev:-"]
["TCGA_ACC","TCGA-OR-A5LO-01A","PXN--PLA2G1B","12:PXN:120265617:PLA2G1B:120326020:rev:-"]
["TCGA_ACC","TCGA-OR-A5LO-01A","REPS2--TXLNG","X:REPS2:17006344:TXLNG:16818574:rev:+"]
["TCGA_ACC","TCGA-OU-A5PI-01A","FHOD3--ELP2","18:FHOD3:36372744:ELP2:36142826:rev:+"]
["TCGA_ACC","TCGA-PK-A5HA-01A","NEK4--TMEM110-MUSTN1","3:NEK4:52763470:TMEM110-MUSTN1:52855444:rev:-"]
["TCGA_ACC","TCGA-PK-A5HB-01A","PAPSS2--MINPP1","10:PAPSS2:87715843:MINPP1:87552082:rev:+"]
["TCGA_ACC","TCGA-PK-A5HB-01A","RRP7A--PACSIN2","22:RRP7A:42519714:PACSIN2:42879169:rev:-"]
["TCGA_CESC","TCGA-C5-A1M6","ZC3H7A--BCAR4","16:ZC3H7A:11796219:BCAR4:11820297:rev:-"]
["TCGA_CESC","TCGA-C5-A1MJ","ZC3H7A--BCAR4","16:ZC3H7A:11796219:BCAR4:11820297:rev:-"]
["TCGA_CESC","TCGA-C5-A3HF","ZC3H7A--BCAR4","16:ZC3H7A:11797124:BCAR4:11820297:rev:-"]
["TCGA_CESC","TCGA-DS-A3LQ","MYH9--TXN2","22:MYH9:36341370:TXN2:36467917:rev:-"]
["TCGA_CESC","TCGA-EA-A50E","ARL8B--ITPR1","3:ARL8B:5122588:ITPR1:4846139:rev:+"]
["TCGA_CESC","TCGA-IR-A3LI","ZC3H7A--BCAR4","16:ZC3H7A:11797124:BCAR4:11820297:rev:-"]
["TCGA_CESC","TCGA-JW-A5VJ","MYH9--TXN2","22:MYH9:36348904:TXN2:36467917:rev:-"]
["TCGA_CHOL","TCGA-3X-AAVA-01A","PTPRF--MICALL2","1:PTPRF:43578920:+:7:MICALL2:1428791:-:fusion"]
["TCGA_CHOL","TCGA-3X-AAVB-01A","TRIB3--SLC24A3","20:TRIB3:391579:+:20:SLC24A3:19515488:+:reg"]
["TCGA_CHOL","TCGA-3X-AAVC-01A","ZNF311--TTBK1","6:ZNF311:28998734:-:6:TTBK1:43269643:+:strandcross"]
["TCGA_CHOL","TCGA-4G-AAZO-01A","RASAL2--COPA","1:RASAL2:178300118:+:1:COPA:160340294:-:strandcross"]
["TCGA_CHOL","TCGA-W5-AA2Q-01A","FGFR2--SHTN1","10:FGFR2:121483698:-:10:SHTN1:116948997:-:reg"]
["TCGA_CHOL","TCGA-W5-AA2U-01A","OLA1--CAB39","2:OLA1:174123180:-:2:CAB39:230798729:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA2W-01A","FGFR2--BICC1","10:FGFR2:121483698:-:10:BICC1:58806584:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA2X-01A","SHANK2--NEU3","11:SHANK2:70659828:-:11:NEU3:74989018:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA2X-01A","UVRAG--SHANK2","11:UVRAG:75912039:+:11:SHANK2:70820682:-:strandcross"]
["TCGA_CHOL","TCGA-W5-AA2Z-01A","FGFR2--CCDC186","10:FGFR2:121483698:-:10:CCDC186:114151220:-:reg"]
["TCGA_CHOL","TCGA-W5-AA31-01A","NCOR1--HIC1","17:NCOR1:16070165:-:17:HIC1:2056671:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA31-01A","CCL14--MYH10","17:CCL14:35986571:-:17:MYH10:8623277:-:reg"]
["TCGA_CHOL","TCGA-W5-AA31-01A","TAOK1--NCOR1","17:TAOK1:29510992:+:17:NCOR1:16080727:-:strandcross"]
["TCGA_CHOL","TCGA-W5-AA31-01A","MYO18A--NF1","17:MYO18A:29165942:-:17:NF1:31155983:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA31-01A","PITPNM3--P2RX5","17:PITPNM3:6468225:-:17:P2RX5:3691794:-:reg"]
["TCGA_CHOL","TCGA-W5-AA31-01A","SPNS2--PSMD11","17:SPNS2:4525193:+:17:PSMD11:32477521:+:reg"]
["TCGA_CHOL","TCGA-W5-AA31-01A","ELAC2--RABEP1","17:ELAC2:13005921:-:17:RABEP1:5308694:+:strandcross"]
["TCGA_CHOL","TCGA-W5-AA39-01A","IL1RAP--SIRPG","3:IL1RAP:190629498:+:20:SIRPG:1649408:-:fusion"]
["TCGA_CHOL","TCGA-W6-AA0S-01A","NRAS--CLDN14","1:NRAS:114716050:-:21:CLDN14:36461776:-:fusion"]
["TCGA_CHOL","TCGA-WD-A7RX-01A","FOXP1--SH3RF2","3:FOXP1:71041328:-:5:SH3RF2:146000058:+:fusion"]
["TCGA_CHOL","TCGA-ZH-A8Y1-01A","PTPRK--SMNDC1","6:PTPRK:128240035:-:10:SMNDC1:110298790:-:fusion"]
["TCGA_CHOL","TCGA-ZH-A8Y4-01A","SHROOM4--AR","X:SHROOM4:50695786:-:X:AR:67686010:+:strandcross"]
["TCGA_CHOL","TCGA-ZH-A8Y5-01A","FGFR2--BICC1","10:FGFR2:121483698:-:10:BICC1:58702074:+:strandcross"]
["TCGA_CHOL","TCGA-ZH-A8Y8-01A","PTPRS--TPM4","19:PTPRS:5265008:-:19:TPM4:16088027:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","AGAP1--C1orf115","2:AGAP1:235968623:+:1:C1orf115:220696612:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","STARD13--CAB39L","13:STARD13:33350290:-:13:CAB39L:49382941:-:rev"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","FOXO1--FNDC3A","13:FOXO1:40665583:-:13:FNDC3A:49075289:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","STARD3--IKZF3","17:STARD3:39637231:+:17:IKZF3:39829488:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","GRB7--MIEN1","17:GRB7:39742456:+:17:MIEN1:39730291:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GF-01A","ERBB2--PGAP3","17:ERBB2:39700311:+:17:PGAP3:39684749:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","ACP6--BCL9","1:ACP6:147648246:-:1:BCL9:147618816:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","HOXA10--CSN1S1","7:HOXA10:27173349:-:4:CSN1S1:69932544:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","NFIX--DOCK6","19:NFIX:13025552:+:19:DOCK6:11253726:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","DOCK6--NFIX","19:DOCK6:11262397:-:19:NFIX:13073047:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","PVT1--SNX31","8:PVT1:127794734:+:8:SNX31:100617730:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","DECR1--STAU2","8:DECR1:90001561:+:8:STAU2:73552319:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","NCOA2--STAU2-AS1","8:NCOA2:70155971:-:8:STAU2-AS1:73438932:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","PVT1--TMEM67","8:PVT1:127794734:+:8:TMEM67:93795409:+:rev"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","PVT1--TNFRSF11B","8:PVT1:127794734:+:8:TNFRSF11B:118933300:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","TMEM67--TNFRSF11B","8:TMEM67:93795987:+:8:TNFRSF11B:118933300:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GH-01A","NLRC5--FTO","16:NLRC5:57045492:+:16:FTO:54111762:+:rev"]
["TCGA_ESCA","TCGA-2H-A9GH-01A","LEPR--MEF2D","1:LEPR:65605237:+:1:MEF2D:156469020:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GH-01A","CPNE8--MGST1","12:CPNE8:38762112:-:12:MGST1:16354231:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","SMARCA5--COL17A1","4:SMARCA5:143546908:+:10:COL17A1:104064596:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","YTHDC1--GAK","4:YTHDC1:68349726:-:4:GAK:898158:-:reg"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","SPOP--IKZF3","17:SPOP:49618981:-:17:IKZF3:39832151:-:reg"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","TNS4--WIPF2","17:TNS4:40479674:-:17:WIPF2:40256391:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","PPP4R2--KIDINS220","3:PPP4R2:72998158:+:2:KIDINS220:8779814:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","DAP3--MAP6D1","1:DAP3:155689243:+:3:MAP6D1:183818111:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","MIR2052HG--PAG1","8:MIR2052HG:74703682:+:8:PAG1:81030089:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","PITPNM3--PELP1","17:PITPNM3:6525356:-:17:PELP1:4691442:-:reg"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","IRF7--RCC1","11:IRF7:615345:-:1:RCC1:28516725:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","TPX2--RIF1","20:TPX2:31760179:+:2:RIF1:151458811:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","LINC01989--TBCD","17:LINC01989:34174560:-:17:TBCD:82921501:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","SLC20A2--VDAC3","8:SLC20A2:42436989:-:8:VDAC3:42394210:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GL-01A","PYGB--CDC20B","20:PYGB:25248421:+:5:CDC20B:55114318:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GL-01A","AGAP1--WRB","2:AGAP1:235494849:+:21:WRB:39390698:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GM-01A","ATP9B--ZNF521","18:ATP9B:79126375:+:18:ZNF521:25092081:-:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","DMPK--SLPI","19:DMPK:45774949:-:20:SLPI:45253733:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","LPCAT4--SPRED1","15:LPCAT4:34362196:-:15:SPRED1:38299373:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","EIF2AK4--TMOD3","15:EIF2AK4:39955768:+:15:TMOD3:51931031:+:reg"]
["TCGA_ESCA","TCGA-2H-A9GO-01A","SUN1--AHNAK","7:SUN1:843520:+:11:AHNAK:62433891:-:fusion"]
["TCGA_ESCA","TCGA-2H-A9GO-01A","ZNF429--RBMS3","19:ZNF429:21505774:+:3:RBMS3:29434743:+:fusion"]
["TCGA_ESCA","TCGA-2H-A9GQ-01A","RNF111--TLN2","15:RNF111:58988068:+:15:TLN2:62792641:+:reg"]
["TCGA_ESCA","TCGA-2H-A9GR-01A","VCPIP1--C8orf44","8:VCPIP1:66664249:-:8:C8orf44:66677642:+:strandcross"]
["TCGA_ESCA","TCGA-2H-A9GR-01A","SKIL--P3H2","3:SKIL:170361429:+:3:P3H2:189995442:-:strandcross"]
["TCGA_ESCA","TCGA-IC-A6RE-01A","SIPA1L3--ODF3L2","19:SIPA1L3:38182740:+:19:ODF3L2:464364:-:strandcross"]
["TCGA_ESCA","TCGA-IC-A6RE-01A","CASP7--TRUB1","10:CASP7:113697603:+:10:TRUB1:114942645:+:reg"]
["TCGA_ESCA","TCGA-IC-A6RF-01A","ZNF808--PIGX","19:ZNF808:52543347:+:3:PIGX:196727923:+:fusion"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","ST3GAL4--C11orf70","11:ST3GAL4:126409411:+:11:C11orf70:102058880:+:rev"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","DCPS--CCND1","11:DCPS:126306744:+:11:CCND1:69643031:+:rev"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","YAP1--CDON","11:YAP1:102114394:+:11:CDON:126023537:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","SOCS6--CTDP1","18:SOCS6:70289090:+:18:CTDP1:79695225:+:reg"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","ST3GAL4--FGF19","11:ST3GAL4:126355842:+:11:FGF19:69699576:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","CTTN--KIRREL3","11:CTTN:70398614:+:11:KIRREL3:126473466:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","ZNRF3--SLC5A1","22:ZNRF3:28884066:+:22:SLC5A1:32049943:+:reg"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","CCND1--YAP1","11:CCND1:69648142:+:11:YAP1:102162456:+:reg"]
["TCGA_ESCA","TCGA-IG-A3I8-01A","DCPS--YAP1","11:DCPS:126306744:+:11:YAP1:102162456:+:rev"]
["TCGA_ESCA","TCGA-IG-A3QL-01A","RAB6B--PPP2R3A","3:RAB6B:133895397:-:3:PPP2R3A:136145043:+:strandcross"]
["TCGA_ESCA","TCGA-IG-A3Y9-01A","AARS--CEP192","16:AARS:70282620:-:18:CEP192:13114130:+:fusion"]
["TCGA_ESCA","TCGA-IG-A3YA-01A","MED12L--DPYD","3:MED12L:151430380:+:1:DPYD:97740479:-:fusion"]
["TCGA_ESCA","TCGA-IG-A3YB-01A","RBM47--KCTD8","4:RBM47:40629396:-:4:KCTD8:44175250:-:rev"]
["TCGA_ESCA","TCGA-IG-A3YB-01A","KIF5C--STK39","2:KIF5C:148875743:+:2:STK39:168182090:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A3YC-01A","MAP2K7--CACNA1A","19:MAP2K7:7904068:+:19:CACNA1A:13262833:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A3YC-01A","USP9X--PNPLA4","X:USP9X:41086109:+:X:PNPLA4:7912093:-:strandcross"]
["TCGA_ESCA","TCGA-IG-A4QS-01A","SMG1--ABCC1","16:SMG1:18890863:-:16:ABCC1:16102627:+:strandcross"]
["TCGA_ESCA","TCGA-IG-A50L-01A","ZNF217--MAVS","20:ZNF217:53571721:-:20:MAVS:3862254:+:strandcross"]
["TCGA_ESCA","TCGA-IG-A51D-01A","FUS--IL9R","16:FUS:31182664:+:X:IL9R:156001330:+:fusion"]
["TCGA_ESCA","TCGA-IG-A5B8-01A","BAZ2B--CFAP43","2:BAZ2B:159615394:-:10:CFAP43:104133784:-:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","EPC1--AKR1E2","10:EPC1:32346763:-:10:AKR1E2:4830675:+:strandcross"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","NCOA6--DEFB118","20:NCOA6:34754722:-:20:DEFB118:31372857:+:strandcross"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","EML4--EPHA3","2:EML4:42295516:+:3:EPHA3:89449225:+:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","BCL11A--HACD1","2:BCL11A:60545971:-:10:HACD1:17604047:-:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","NUMA1--IQSEC3","11:NUMA1:72069842:-:12:IQSEC3:99146:+:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","FBXO11--NET1","2:FBXO11:47838859:-:10:NET1:5451830:+:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","PARD3--NRXN1","10:PARD3:34696318:-:2:NRXN1:50091494:-:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","ZNF418--USP25","19:ZNF418:57930428:-:21:USP25:15831401:+:fusion"]
["TCGA_ESCA","TCGA-IG-A8O2-01A","MPP7--ZEB1","10:MPP7:28202153:-:10:ZEB1:31502348:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","PVT1--ANXA13","8:PVT1:127794734:+:8:ANXA13:123702736:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","TESK2--C8A","1:TESK2:45385912:-:1:C8A:56883481:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","TMLHE--DERL1","X:TMLHE:155612792:-:8:DERL1:123030716:-:fusion"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","MAGI3--RGS18","1:MAGI3:113549631:+:1:RGS18:192158631:+:reg"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","FAF1--TESK2","1:FAF1:50655442:-:1:TESK2:45348000:-:reg"]
["TCGA_ESCA","TCGA-JY-A6FB-01A","JUP--C17orf80","17:JUP:41771647:-:17:C17orf80:73242896:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FB-01A","CD2AP--FAM69A","6:CD2AP:47478248:+:1:FAM69A:92876430:-:fusion"]
["TCGA_ESCA","TCGA-JY-A6FB-01A","VEZF1--KRT222","17:VEZF1:57988079:-:17:KRT222:40660207:-:reg"]
["TCGA_ESCA","TCGA-JY-A6FB-01A","FOXP4--UBR2","6:FOXP4:41587897:+:6:UBR2:42605721:+:reg"]
["TCGA_ESCA","TCGA-JY-A6FB-01A","CD2AP--USP49","6:CD2AP:47579489:+:6:USP49:41807011:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FD-01A","PPP2R2A--ATCAY","8:PPP2R2A:26293740:+:19:ATCAY:3913758:+:fusion"]
["TCGA_ESCA","TCGA-JY-A6FD-01A","PPP1R37--RTN2","19:PPP1R37:45142458:+:19:RTN2:45486113:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FE-01A","EEA1--LRRIQ1","12:EEA1:92929043:-:12:LRRIQ1:85104004:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FE-01A","FTO--ZNF423","16:FTO:53704229:+:16:ZNF423:49525494:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","TYW1--DMTF1","7:TYW1:67117618:+:7:DMTF1:87166483:+:reg"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","RERE--GNB1","1:RERE:8655973:-:1:GNB1:1839238:-:reg"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","PLEKHG5--KHDRBS1","1:PLEKHG5:6519445:-:1:KHDRBS1:32030298:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","PPP1R13B--L2HGDH","14:PPP1R13B:103847299:-:14:L2HGDH:50284033:-:reg"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","LINC00511--LINC00469","17:LINC00511:72592203:-:17:LINC00469:73761026:-:rev"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","ACTN4--MAP4K1","19:ACTN4:38647907:+:19:MAP4K1:38616259:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","URI1--PDCD5","19:URI1:29942664:+:19:PDCD5:32582195:+:reg"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","DRAM1--SYCP3","12:DRAM1:101877920:+:12:SYCP3:101731666:-:strandcross"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","PUM1--YARS","1:PUM1:31055313:-:1:YARS:32811057:-:rev"]
["TCGA_ESCA","TCGA-JY-A938-01A","PTPRK--ARHGAP18","6:PTPRK:128184432:-:6:ARHGAP18:129618852:-:rev"]
["TCGA_ESCA","TCGA-JY-A938-01A","LETM1--RGS12","4:LETM1:1822988:-:4:RGS12:3316070:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A938-01A","PTPRK--RSPO3","6:PTPRK:128184432:-:6:RSPO3:127148648:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A938-01A","SLC2A12--SAMD3","6:SLC2A12:134052378:-:6:SAMD3:130313093:-:reg"]
["TCGA_ESCA","TCGA-JY-A938-01A","C3--ZNF556","19:C3:6690629:-:19:ZNF556:2873496:+:strandcross"]
["TCGA_ESCA","TCGA-JY-A93F-01A","CTCF--KIAA0895L","16:CTCF:67571264:+:16:KIAA0895L:67180666:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43E-01A","GLRX3--SGMS1","10:GLRX3:130136512:+:10:SGMS1:50519921:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43H-01A","CPT1A--PPFIA1","11:CPT1A:68784815:-:11:PPFIA1:70348189:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A43I-01A","RHPN2--CLASRP","19:RHPN2:33026504:-:19:CLASRP:45070537:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A43I-01A","AC068587.6--FLJ42969","8:AC068587.6:12659130:-:8:FLJ42969:101054498:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A43I-01A","ZNF169--IMMP1L","9:ZNF169:94293069:+:11:IMMP1L:31432568:-:fusion"]
["TCGA_ESCA","TCGA-L5-A43I-01A","ZMYM2--LATS2","13:ZMYM2:19960026:+:13:LATS2:21046230:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43I-01A","NADSYN1--SPAG9","11:NADSYN1:71482025:+:17:SPAG9:50970856:-:fusion"]
["TCGA_ESCA","TCGA-L5-A43J-01A","MRPL15--ACY3","8:MRPL15:54142786:+:11:ACY3:67647589:-:fusion"]
["TCGA_ESCA","TCGA-L5-A43J-01A","PPP5C--AP2S1","19:PPP5C:46353989:+:19:AP2S1:46839578:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43J-01A","PIN1--PDE4C","19:PIN1:9838648:+:19:PDE4C:18233400:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43J-01A","SBF1--TSR2","22:SBF1:50459255:-:X:TSR2:54443400:+:fusion"]
["TCGA_ESCA","TCGA-L5-A43M-01A","ADIPOR2--CASK","12:ADIPOR2:1691191:+:X:CASK:41524034:-:fusion"]
["TCGA_ESCA","TCGA-L5-A43M-01A","CTDSP2--MAGEB16","12:CTDSP2:57846372:-:X:MAGEB16:35802131:+:fusion"]
["TCGA_ESCA","TCGA-L5-A43M-01A","CLIC4--MUM1","1:CLIC4:24745625:+:19:MUM1:1356324:+:fusion"]
["TCGA_ESCA","TCGA-L5-A43M-01A","WIF1--PAG1","12:WIF1:65062481:-:8:PAG1:80993307:-:fusion"]
["TCGA_ESCA","TCGA-L5-A43M-01A","TMEM106C--RPAP3","12:TMEM106C:47964423:+:12:RPAP3:47686907:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A43M-01A","SMAGP--TBC1D30","12:SMAGP:51269245:-:12:TBC1D30:64843380:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OE-01A","RBM47--RAPGEF2","4:RBM47:40629396:-:4:RAPGEF2:159304342:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OF-01A","SLMAP--FAF1","3:SLMAP:57909150:+:1:FAF1:50801677:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OH-01A","SPOP--ITGB3","17:SPOP:49636759:-:17:ITGB3:47274419:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OH-01A","NOS2--MYO18A","17:NOS2:27798700:-:17:MYO18A:29122253:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OJ-01A","GATA4--TRIB1","8:GATA4:11704304:+:8:TRIB1:125436006:+:reg"]
["TCGA_ESCA","TCGA-L5-A4ON-01A","CMTR1--CCDC167","6:CMTR1:37479255:+:6:CCDC167:37485194:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4ON-01A","PPP1R37--DAAM2","19:PPP1R37:45093527:+:6:DAAM2:39896812:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4ON-01A","ITPR2--KIAA0922","12:ITPR2:26621123:-:4:KIAA0922:153580826:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4ON-01A","ADAM9--SGK2","8:ADAM9:39023325:+:20:SGK2:43566473:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OO-01A","CTNND1--CLPB","11:CTNND1:57810223:+:11:CLPB:72380384:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OO-01A","ATP8A1--SHISA3","4:ATP8A1:42522160:-:4:SHISA3:42401012:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SAT1--APOO","X:SAT1:23783883:+:X:APOO:23880952:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","RHPN2--BRSK1","19:RHPN2:33064784:-:19:BRSK1:55287007:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SARS2--DEDD2","19:SARS2:38917724:-:19:DEDD2:42199829:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","MYH14--GPR19","19:MYH14:50210770:+:12:GPR19:12695511:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","CEP89--GTF2E2","19:CEP89:32931429:-:8:GTF2E2:30580396:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","TLK1--KCNH7","2:TLK1:171117739:-:2:KCNH7:162537080:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","ACACA--LASP1","17:ACACA:37179260:-:17:LASP1:38878086:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","UBA2--MIER2","19:UBA2:34450364:+:19:MIER2:334542:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","CBFB--NAE1","16:CBFB:67036755:+:16:NAE1:66823600:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","USP32--RBFOX3","17:USP32:60345481:-:17:RBFOX3:79307824:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","FAM102A--WDR93","9:FAM102A:127953575:-:15:WDR93:89743292:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","EPC1--ARHGAP28","10:EPC1:32291163:-:18:ARHGAP28:6873409:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","EPC1--L3MBTL4","10:EPC1:32291163:-:18:L3MBTL4:6301957:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","TRMT10C--LINC01312","3:TRMT10C:101562003:+:6:LINC01312:133837593:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","LARP4--LINC02408","12:LARP4:50401028:+:12:LINC02408:67565514:+:reg"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","USP54--PIK3CD","10:USP54:73520908:-:1:PIK3CD:9715541:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OR-01A","PTGES3--SPATS2","12:PTGES3:56687998:-:12:SPATS2:49514555:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","ACTL8--ACOX1","1:ACTL8:17755504:+:17:ACOX1:75960375:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","CDH3--C16orf70","16:CDH3:68645750:+:16:C16orf70:67120112:+:rev"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","RAF1--C9orf153","3:RAF1:12585681:-:9:C9orf153:86229629:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","ANKFY1--CCDC88C","17:ANKFY1:4242256:-:14:CCDC88C:91291084:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","C14orf159--CDC42BPB","14:C14orf159:91170201:+:14:CDC42BPB:102986580:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","SMURF1--CFLAR","7:SMURF1:99143726:-:2:CFLAR:201129729:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","CACNA1D--GNL3","3:CACNA1D:53770552:+:3:GNL3:52690592:+:rev"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","PHF21A--LEUTX","11:PHF21A:46119724:-:19:LEUTX:39784527:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","TRUB2--MAPKAP1","9:TRUB2:128321599:-:9:MAPKAP1:125585727:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","GRB2--PADI1","17:GRB2:75321659:-:1:PADI1:17244010:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","MAFF--RCOR1","22:MAFF:38202212:+:14:RCOR1:102681895:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OS-01A","ACLY--WEE1","17:ACLY:41873811:-:11:WEE1:9588449:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OT-01A","STK3--COX6C","8:STK3:98706467:-:8:COX6C:99887618:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OU-01A","HIPK2--CPSF4","7:HIPK2:139777605:-:7:CPSF4:99444789:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OU-01A","TMEM60--HIP1","7:TMEM60:77798254:-:7:HIP1:75549001:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OU-01A","ATAD5--IKZF3","17:ATAD5:30869646:+:17:IKZF3:39766493:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OU-01A","CAPZA2--STYXL1","7:CAPZA2:116888190:+:7:STYXL1:76028703:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","CYP51A1--ANKIB1","7:CYP51A1:92134173:-:7:ANKIB1:92294889:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","PPP1R9B--BAIAP2","17:PPP1R9B:50149143:-:17:BAIAP2:81084832:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","SEPT9--BAIAP2","17:SEPT9:77307197:+:17:BAIAP2:81115770:+:reg"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","PGS1--BPTF","17:PGS1:78404089:+:17:BPTF:67920015:+:rev"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","TPMT--BTBD9","6:TPMT:18148988:-:6:BTBD9:38402903:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","CPD--CCDC57","17:CPD:30442450:+:17:CCDC57:82183932:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","TBCD--CCDC57","17:TBCD:82809782:+:17:CCDC57:82101866:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","JMJD6--CD300LF","17:JMJD6:76723772:-:17:CD300LF:74705377:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","LINC00511--FADS6","17:LINC00511:72592203:-:17:FADS6:74882710:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","CWC25--LPCAT1","17:CWC25:38806297:-:5:LPCAT1:1489858:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","STAT3--NOS2","17:STAT3:42388279:-:17:NOS2:27789688:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","FKBP10--RETREG3","17:FKBP10:41817203:+:17:RETREG3:42587864:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","HELZ--SKAP1","17:HELZ:67107169:-:17:SKAP1:48396785:-:reg"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","ETV4--TCAP","17:ETV4:43532674:-:17:TCAP:39665716:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A4OW-01A","JUP--TTLL6","17:JUP:41768969:-:17:TTLL6:48787999:-:rev"]
["TCGA_ESCA","TCGA-L5-A4OX-01A","DYRK1A--DENND3","21:DYRK1A:37367628:+:8:DENND3:141175200:+:fusion"]
["TCGA_ESCA","TCGA-L5-A4OX-01A","PDXK--KLF10","21:PDXK:43734123:+:8:KLF10:102652397:-:fusion"]
["TCGA_ESCA","TCGA-L5-A4OX-01A","STAT5B--NSRP1","17:STAT5B:42276248:-:17:NSRP1:30168103:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A88S-01A","PHC3--FNDC3B","3:PHC3:170106832:-:3:FNDC3B:172397164:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A88S-01A","PHC3--NCEH1","3:PHC3:170113360:-:3:NCEH1:172648114:-:rev"]
["TCGA_ESCA","TCGA-L5-A88S-01A","FNDC3B--TNIK","3:FNDC3B:172133546:+:3:TNIK:171228221:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A88T-01A","HSP90AB1--MKL2","6:HSP90AB1:44252267:+:16:MKL2:14260909:+:fusion"]
["TCGA_ESCA","TCGA-L5-A88T-01A","HUS1--VOPP1","7:HUS1:47967806:-:7:VOPP1:55521130:-:rev"]
["TCGA_ESCA","TCGA-L5-A88V-01A","STARD3--FBXL20","17:STARD3:39637231:+:17:FBXL20:39303639:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A88V-01A","KIAA1109--FSTL5","4:KIAA1109:122250573:+:4:FSTL5:161542693:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A88V-01A","GRB7--PIP4K2B","17:GRB7:39738133:+:17:PIP4K2B:38771272:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A88V-01A","MED1--STARD3","17:MED1:39424627:-:17:STARD3:39653481:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A88Y-01A","PLEKHA1--CYP2C19","10:PLEKHA1:122400388:+:10:CYP2C19:94842837:+:rev"]
["TCGA_ESCA","TCGA-L5-A88Y-01A","KIAA1109--LINC01091","4:KIAA1109:122331541:+:4:LINC01091:123829095:+:reg"]
["TCGA_ESCA","TCGA-L5-A88Y-01A","HPSE2--TIMM23","10:HPSE2:99144238:-:10:TIMM23:46003203:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","MKNK2--AC010328.1","19:MKNK2:2050801:-:19:AC010328.1:53009347:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","MAP7--AL357060.3","6:MAP7:136550342:-:6:AL357060.3:137824577:-:rev"]
["TCGA_ESCA","TCGA-L5-A891-01A","ZNF541--C19orf68","19:ZNF541:47544126:-:19:C19orf68:48194653:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","MAP1S--CEACAM6","19:MAP1S:17721037:+:19:CEACAM6:41766183:+:reg"]
["TCGA_ESCA","TCGA-L5-A891-01A","ZNF417--CNFN","19:ZNF417:57916379:-:19:CNFN:42389039:-:reg"]
["TCGA_ESCA","TCGA-L5-A891-01A","IP6K1--FOXRED2","3:IP6K1:49786354:-:22:FOXRED2:36506423:-:fusion"]
["TCGA_ESCA","TCGA-L5-A891-01A","KLF9--FOXRED2","9:KLF9:70412859:-:22:FOXRED2:36493803:-:fusion"]
["TCGA_ESCA","TCGA-L5-A891-01A","R3HCC1--GRIK5","8:R3HCC1:23290469:+:19:GRIK5:42006810:-:fusion"]
["TCGA_ESCA","TCGA-L5-A891-01A","ZNF562--HK2","19:ZNF562:9658009:-:2:HK2:74872300:+:fusion"]
["TCGA_ESCA","TCGA-L5-A891-01A","R3HDM4--JAK3","19:R3HDM4:913087:-:19:JAK3:17843172:-:rev"]
["TCGA_ESCA","TCGA-L5-A891-01A","PRKD2--KLHL26","19:PRKD2:46700799:-:19:KLHL26:18667664:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","ADGRL1--LGALS4","19:ADGRL1:14177531:-:19:LGALS4:38808948:-:rev"]
["TCGA_ESCA","TCGA-L5-A891-01A","PPP1R13L--MBOAT7","19:PPP1R13L:45382527:-:19:MBOAT7:54174431:-:rev"]
["TCGA_ESCA","TCGA-L5-A891-01A","ELL--MKNK2","19:ELL:18458205:-:19:MKNK2:2046691:-:reg"]
["TCGA_ESCA","TCGA-L5-A891-01A","CARD8--MYH14","19:CARD8:48255792:-:19:MYH14:50248987:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","LSR--NLRP2","19:LSR:35250659:+:19:NLRP2:54969999:+:reg"]
["TCGA_ESCA","TCGA-L5-A891-01A","CARM1--PLA2G4C","19:CARM1:10871922:+:19:PLA2G4C:48048388:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","ARID3A--PRPF31","19:ARID3A:929896:+:19:PRPF31:54131307:+:reg"]
["TCGA_ESCA","TCGA-L5-A891-01A","GIPR--RBM42","19:GIPR:45670734:+:19:RBM42:35637158:+:rev"]
["TCGA_ESCA","TCGA-L5-A891-01A","DHX30--SMARCC1","3:DHX30:47829134:+:3:SMARCC1:47772936:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","DNAJB1--TRPM4","19:DNAJB1:14527687:-:19:TRPM4:49200300:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A891-01A","HK2--ZNF121","2:HK2:74874449:+:19:ZNF121:9569082:-:fusion"]
["TCGA_ESCA","TCGA-L5-A891-01A","GATAD2A--ZNF350","19:GATAD2A:19386138:+:19:ZNF350:51974531:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A893-01A","BTBD9--MANEA","6:BTBD9:38256409:-:6:MANEA:95596737:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","NPR2--BAIAP2","9:NPR2:35807398:+:17:BAIAP2:81099928:+:fusion"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","CCT4--BIRC6","2:CCT4:61880286:-:2:BIRC6:32531355:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","PSMG2--OSBPL1A","18:PSMG2:12703164:+:18:OSBPL1A:24334330:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","MIR762HG--PKIG","16:MIR762HG:30876118:+:20:PKIG:44582585:+:fusion"]
["TCGA_ESCA","TCGA-L5-A8NE-01A","PPFIA1--XRRA1","11:PPFIA1:70272436:+:11:XRRA1:74845271:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","BAIAP2L1--ANKIB1","7:BAIAP2L1:98304196:-:7:ANKIB1:92294889:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","STARD10--DAGLA","11:STARD10:72780975:-:11:DAGLA:61720112:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","PMPCB--DNAJC2","7:PMPCB:103312131:+:7:DNAJC2:103341954:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","ARRB1--FCHSD2","11:ARRB1:75351588:-:11:FCHSD2:73015885:-:reg"]
["TCGA_ESCA","TCGA-L5-A8NF-01A","TBC1D15--PTPRR","12:TBC1D15:71872168:+:12:PTPRR:70892977:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NG-01A","MBTD1--THRA","17:MBTD1:51259143:-:17:THRA:40083835:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NG-01A","RBM33--TMEM120A","7:RBM33:155644919:+:7:TMEM120A:75989224:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NG-01A","FBL--ZNF829","19:FBL:39836556:-:19:ZNF829:36915251:-:reg"]
["TCGA_ESCA","TCGA-L5-A8NH-01A","PTP4A1--NOTCH3","6:PTP4A1:63572719:+:19:NOTCH3:15166091:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NH-01A","CPT1A--RNFT1","11:CPT1A:68759569:-:17:RNFT1:59953111:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NH-01A","ATP6V0A1--STAT3","17:ATP6V0A1:42514460:+:17:STAT3:42346713:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","THRAP3--ARHGEF10L","1:THRAP3:36224505:+:1:ARHGEF10L:17580553:+:rev"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","SPRED1--C15orf39","15:SPRED1:38299547:+:15:C15orf39:75201961:+:reg"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","NIPBL--C5orf42","5:NIPBL:36962274:+:5:C5orf42:37115049:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","FAM102A--EMSY","9:FAM102A:127979992:-:11:EMSY:76544259:+:fusion"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","GOLPH3--IKZF3","5:GOLPH3:32173810:-:17:IKZF3:39766493:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","SND1--KMT2C","7:SND1:127652451:+:7:KMT2C:152358675:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","C5orf42--NIPBL","5:C5orf42:37138720:-:5:NIPBL:36995622:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","KMT5B--RNPS1","11:KMT5B:68213138:-:16:RNPS1:2255726:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","CCM2--SLC38A10","7:CCM2:45000363:+:17:SLC38A10:81253240:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NI-01A","CLASRP--ZNF317","19:CLASRP:45040311:+:19:ZNF317:9155925:+:rev"]
["TCGA_ESCA","TCGA-L5-A8NJ-01A","ACACA--C17orf78","17:ACACA:37406262:-:17:C17orf78:37389246:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NJ-01A","PGAP3--ERBB2","17:PGAP3:39684597:-:17:ERBB2:39688696:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NL-01A","PTPN2--L3MBTL4","18:PTPN2:12814203:-:18:L3MBTL4:5969562:-:reg"]
["TCGA_ESCA","TCGA-L5-A8NL-01A","BCAS3--SCN4A","17:BCAS3:61084564:+:17:SCN4A:63961431:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NL-01A","TMEM241--SERPINB7","18:TMEM241:23309680:-:18:SERPINB7:63782355:+:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NL-01A","TANC2--TSHZ2","17:TANC2:63319090:+:20:TSHZ2:53487144:+:fusion"]
["TCGA_ESCA","TCGA-L5-A8NR-01A","ZNF718--GAK","4:ZNF718:124673:+:4:GAK:898158:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NR-01A","REEP3--RTKN2","10:REEP3:63599283:+:10:RTKN2:62246057:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NS-01A","MIDN--C19orf38","19:MIDN:1255694:+:19:C19orf38:10848441:+:reg"]
["TCGA_ESCA","TCGA-L5-A8NS-01A","WWP2--CDH13","16:WWP2:69888249:+:16:CDH13:82858362:+:reg"]
["TCGA_ESCA","TCGA-L5-A8NS-01A","MAN1C1--CFAP46","1:MAN1C1:25749335:+:10:CFAP46:132872824:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NS-01A","ARAP1--IL12RB2","11:ARAP1:72693325:-:1:IL12RB2:67350870:+:fusion"]
["TCGA_ESCA","TCGA-L5-A8NS-01A","AAMDC--TMEM135","11:AAMDC:77821241:+:11:TMEM135:87295782:+:reg"]
["TCGA_ESCA","TCGA-L5-A8NT-01A","BARD1--C6orf222","2:BARD1:214780560:-:6:C6orf222:36324190:-:fusion"]
["TCGA_ESCA","TCGA-L5-A8NT-01A","NRP2--KLF7","2:NRP2:205766818:+:2:KLF7:207088581:-:strandcross"]
["TCGA_ESCA","TCGA-L5-A8NU-01A","TMC5--GPRC5B","16:TMC5:19497163:+:16:GPRC5B:19861973:-:strandcross"]
["TCGA_ESCA","TCGA-LN-A49K-01A","SIPA1L2--TTC13","1:SIPA1L2:232443602:-:1:TTC13:230961303:-:reg"]
["TCGA_ESCA","TCGA-LN-A49L-01A","C16orf70--DNAAF1","16:C16orf70:67110239:+:16:DNAAF1:84159675:+:reg"]
["TCGA_ESCA","TCGA-LN-A49L-01A","CHD7--KAT6A","8:CHD7:60679082:+:8:KAT6A:41987563:-:strandcross"]
["TCGA_ESCA","TCGA-LN-A49L-01A","TYW1--RAMP2-AS1","7:TYW1:67055887:+:17:RAMP2-AS1:42760711:-:fusion"]
["TCGA_ESCA","TCGA-LN-A49L-01A","PTPN12--RHBDD2","7:PTPN12:77537645:+:7:RHBDD2:75881365:+:rev"]
["TCGA_ESCA","TCGA-LN-A49M-01A","AFF4--SPATA21","5:AFF4:132963259:-:1:SPATA21:16425731:-:fusion"]
["TCGA_ESCA","TCGA-LN-A49O-01A","TUBA1C--IGFBP4","12:TUBA1C:49269976:+:17:IGFBP4:40452985:+:fusion"]
["TCGA_ESCA","TCGA-LN-A49R-01A","RCHY1--EPHA5","4:RCHY1:75490581:-:4:EPHA5:65420565:-:reg"]
["TCGA_ESCA","TCGA-LN-A49R-01A","ANKRD17--REST","4:ANKRD17:73258276:-:4:REST:56910630:+:strandcross"]
["TCGA_ESCA","TCGA-LN-A49W-01A","SLTM--ADGRL1","15:SLTM:58932356:-:19:ADGRL1:14177744:-:fusion"]
["TCGA_ESCA","TCGA-LN-A49W-01A","POLR3B--ANO4","12:POLR3B:106463620:+:12:ANO4:100901646:+:rev"]
["TCGA_ESCA","TCGA-LN-A49W-01A","CNOT4--EYS","7:CNOT4:135438158:-:6:EYS:64626245:-:fusion"]
["TCGA_ESCA","TCGA-LN-A49X-01A","GRAMD4--TNFAIP8L1","22:GRAMD4:46637960:+:19:TNFAIP8L1:4651867:+:fusion"]
["TCGA_ESCA","TCGA-LN-A49Y-01A","ORC2--DDIAS","2:ORC2:200931339:-:11:DDIAS:82928777:+:fusion"]
["TCGA_ESCA","TCGA-LN-A4A1-01A","SMARCAD1--GRID2","4:SMARCAD1:94253007:+:4:GRID2:93207404:+:rev"]
["TCGA_ESCA","TCGA-LN-A4A1-01A","CPEB4--SHISA5","5:CPEB4:173910604:+:3:SHISA5:48479257:-:fusion"]
["TCGA_ESCA","TCGA-LN-A4A1-01A","SULF2--ZFP64","20:SULF2:47736703:-:20:ZFP64:52153428:-:rev"]
["TCGA_ESCA","TCGA-LN-A4A2-01A","LPP--CLDN1","3:LPP:188406313:+:3:CLDN1:190313036:-:strandcross"]
["TCGA_ESCA","TCGA-LN-A4A2-01A","PI4KA--SNAP29","22:PI4KA:20858570:-:22:SNAP29:20870337:+:strandcross"]
["TCGA_ESCA","TCGA-LN-A4A8-01A","LANCL2--GID8","7:LANCL2:55428447:+:20:GID8:62941491:+:fusion"]
["TCGA_ESCA","TCGA-LN-A4A9-01A","ARHGAP17--CDC5L","16:ARHGAP17:24943771:-:6:CDC5L:44408444:+:fusion"]
["TCGA_ESCA","TCGA-LN-A4A9-01A","ATF7--GLI3","12:ATF7:53626279:-:7:GLI3:42148468:-:fusion"]
["TCGA_ESCA","TCGA-LN-A4A9-01A","ADCY2--ITCH","5:ADCY2:7414770:+:20:ITCH:34438474:+:fusion"]
["TCGA_ESCA","TCGA-LN-A4MQ-01A","SEPT2--RHOH","2:SEPT2:241337790:+:4:RHOH:40242714:+:fusion"]
["TCGA_ESCA","TCGA-LN-A5U5-01A","PARD3B--MYO1B","2:PARD3B:204686282:+:2:MYO1B:191411066:+:rev"]
["TCGA_ESCA","TCGA-LN-A5U6-01A","SYNE2--GEMIN2","14:SYNE2:63853143:+:14:GEMIN2:39114829:+:rev"]
["TCGA_ESCA","TCGA-LN-A5U6-01A","ITGA6--MYEOV","2:ITGA6:172427970:+:11:MYEOV:69341510:+:fusion"]
["TCGA_ESCA","TCGA-LN-A5U6-01A","PHF2--WWOX","9:PHF2:93576871:+:16:WWOX:78386860:+:fusion"]
["TCGA_ESCA","TCGA-LN-A5U6-01A","LRIG2--ZNF250","1:LRIG2:113100488:+:8:ZNF250:144890403:-:fusion"]
["TCGA_ESCA","TCGA-LN-A5U7-01A","TRMT10C--CAMK4","3:TRMT10C:101562003:+:5:CAMK4:111344024:+:fusion"]
["TCGA_ESCA","TCGA-LN-A5U7-01A","ZFP3--PCCB","17:ZFP3:5078575:+:3:PCCB:136255856:+:fusion"]
["TCGA_ESCA","TCGA-LN-A7HV-01A","NDRG1--C9","8:NDRG1:133280232:-:5:C9:39341700:-:fusion"]
["TCGA_ESCA","TCGA-LN-A7HX-01A","ATP7B--KLF5","13:ATP7B:52011287:-:13:KLF5:73061861:+:strandcross"]
["TCGA_ESCA","TCGA-LN-A7HZ-01A","HIF1A--RAD51B","14:HIF1A:61695839:+:14:RAD51B:68291884:+:reg"]
["TCGA_ESCA","TCGA-LN-A8HZ-01A","WWP2--GSG1L","16:WWP2:69799295:+:16:GSG1L:27845061:-:strandcross"]
["TCGA_ESCA","TCGA-LN-A8HZ-01A","FBXL18--PHF12","7:FBXL18:5500488:-:17:PHF12:28911237:-:fusion"]
["TCGA_ESCA","TCGA-LN-A8I1-01A","NFE2L3--C16orf62","7:NFE2L3:26153068:+:16:C16orf62:19669160:+:fusion"]
["TCGA_ESCA","TCGA-LN-A8I1-01A","RPL24--CNBD1","3:RPL24:101682429:-:8:CNBD1:87205993:+:fusion"]
["TCGA_ESCA","TCGA-LN-A8I1-01A","TBL1XR1--DCUN1D1","3:TBL1XR1:177196340:-:3:DCUN1D1:182965753:-:rev"]
["TCGA_ESCA","TCGA-LN-A8I1-01A","TBL1XR1--MCF2L2","3:TBL1XR1:177197121:-:3:MCF2L2:183389779:-:rev"]
["TCGA_ESCA","TCGA-LN-A9FO-01A","IGHMBP2--CPT1A","11:IGHMBP2:68917883:+:11:CPT1A:68815487:-:strandcross"]
["TCGA_ESCA","TCGA-LN-A9FR-01A","TXN--GNB1","9:TXN:110244778:-:1:GNB1:1789269:-:fusion"]
["TCGA_ESCA","TCGA-M9-A5M8-01A","ERBB2--KRT10","17:ERBB2:39695181:+:17:KRT10:40821117:-:strandcross"]
["TCGA_ESCA","TCGA-M9-A5M8-01A","FAM135A--LAMA2","6:FAM135A:70452571:+:6:LAMA2:129049918:+:reg"]
["TCGA_ESCA","TCGA-M9-A5M8-01A","GRB7--MIEN1","17:GRB7:39738133:+:17:MIEN1:39730291:-:strandcross"]
["TCGA_ESCA","TCGA-M9-A5M8-01A","STARD3--RAB5C","17:STARD3:39637231:+:17:RAB5C:42130590:-:strandcross"]
["TCGA_ESCA","TCGA-Q9-A6FU-01A","NDUFS6--SLC9A3","5:NDUFS6:1802374:+:5:SLC9A3:475671:-:strandcross"]
["TCGA_ESCA","TCGA-Q9-A6FU-01A","POLB--XYLT1","8:POLB:42345019:+:16:XYLT1:17200654:-:fusion"]
["TCGA_ESCA","TCGA-R6-A6DN-01B","EHF--BDNF","11:EHF:34651610:+:11:BDNF:27658585:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A6KZ-01A","YAF2--GPHN","12:YAF2:42237599:-:14:GPHN:66879939:+:fusion"]
["TCGA_ESCA","TCGA-R6-A6KZ-01A","APLP2--OPCML","11:APLP2:130070082:+:11:OPCML:132437359:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A6KZ-01A","CTBP2--TLX1NB","10:CTBP2:125158635:-:10:TLX1NB:101127098:-:reg"]
["TCGA_ESCA","TCGA-R6-A6L6-01B","PVT1--FARP1","8:PVT1:127794734:+:13:FARP1:98424572:+:fusion"]
["TCGA_ESCA","TCGA-R6-A6XG-01B","KIF22--PRKCB","16:KIF22:29790829:+:16:PRKCB:24032136:+:rev"]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","SBF2--ANO3","11:SBF2:10193902:-:11:ANO3:26641896:+:strandcross"]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","USP47--NPAT","11:USP47:11892106:+:11:NPAT:108197420:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A6XQ-01B","YAP1--USP2","11:YAP1:102114394:+:11:USP2:119360234:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","CYTH1--KCNJ4","17:CYTH1:78782202:-:22:KCNJ4:38428171:-:fusion"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","MAFK--KCTD5","7:MAFK:1530898:+:16:KCTD5:2695935:+:fusion"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","WASF2--OPRD1","1:WASF2:27489986:-:1:OPRD1:28858954:+:strandcross"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","NT5C2--RIPK4","10:NT5C2:103139406:-:21:RIPK4:41749203:-:fusion"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","RNF24--SNRPD3","20:RNF24:4015437:-:22:SNRPD3:24567984:+:fusion"]
["TCGA_ESCA","TCGA-R6-A6Y0-01B","PSD3--XPO7","8:PSD3:18936034:-:8:XPO7:21966857:+:strandcross"]
["TCGA_ESCA","TCGA-R6-A6Y2-01B","NR2C2--PARL","3:NR2C2:14947906:+:3:PARL:183844326:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","PSME4--ACYP2","2:PSME4:53970543:-:2:ACYP2:54304688:+:strandcross"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","EPN3--AGPAT3","17:EPN3:50539315:+:21:AGPAT3:43959634:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","KIF13B--C20orf194","8:KIF13B:29155726:-:20:C20orf194:3281766:-:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","BRD9--CDK12","5:BRD9:876101:-:17:CDK12:39490557:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","SNAPIN--FMNL1","1:SNAPIN:153659566:+:17:FMNL1:45240476:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","RCOR1--ISCA2","14:RCOR1:102593325:+:14:ISCA2:74494050:+:rev"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","S100A13--MAP3K14","1:S100A13:153631011:-:17:MAP3K14:45270563:-:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","GRB7--PGAP3","17:GRB7:39746202:+:17:PGAP3:39674679:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","DVL3--RFX6","3:DVL3:184155796:+:6:RFX6:116931331:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","BRD9--STARD3","5:BRD9:876101:-:17:STARD3:39657008:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","SPOP--TSPEAR","17:SPOP:49677933:-:21:TSPEAR:44533923:-:fusion"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","XPO5--VARS","6:XPO5:43525107:-:6:VARS:31779814:-:reg"]
["TCGA_ESCA","TCGA-R6-A8W5-01B","AGRN--ZC3H18","1:AGRN:1035324:+:16:ZC3H18:88598178:+:fusion"]
["TCGA_ESCA","TCGA-R6-A8W8-01B","ZNF318--FOXP4","6:ZNF318:43348324:-:6:FOXP4:41565745:+:strandcross"]
["TCGA_ESCA","TCGA-R6-A8W8-01B","AP2B1--GAS2L2","17:AP2B1:35657791:+:17:GAS2L2:35750318:-:strandcross"]
["TCGA_ESCA","TCGA-R6-A8WG-01A","CEP192--PIGU","18:CEP192:13001582:+:20:PIGU:34588607:-:fusion"]
["TCGA_ESCA","TCGA-S8-A6BV-01A","CTNNBIP1--DRAXIN","1:CTNNBIP1:9910095:-:1:DRAXIN:11706249:+:strandcross"]
["TCGA_ESCA","TCGA-S8-A6BV-01A","JMJD6--GLT8D1","17:JMJD6:76718733:-:3:GLT8D1:52696040:-:fusion"]
["TCGA_ESCA","TCGA-S8-A6BV-01A","GLT8D1--JMJD6","3:GLT8D1:52695190:-:17:JMJD6:76716722:-:fusion"]
["TCGA_ESCA","TCGA-S8-A6BW-01A","C12orf66--AC025569.1","12:C12orf66:64215678:-:12:AC025569.1:70538050:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RB-01A","MICALL2--CA3","7:MICALL2:1442192:-:8:CA3:85442073:+:fusion"]
["TCGA_ESCA","TCGA-V5-A7RB-01A","ASAP1--FGF12","8:ASAP1:130358017:-:3:FGF12:192360538:-:fusion"]
["TCGA_ESCA","TCGA-V5-A7RB-01A","UCHL3--KLF5","13:UCHL3:75560881:+:13:KLF5:73063824:+:rev"]
["TCGA_ESCA","TCGA-V5-A7RB-01A","AZIN1--NDUFA13","8:AZIN1:102836256:-:19:NDUFA13:19526182:+:fusion"]
["TCGA_ESCA","TCGA-V5-A7RB-01A","NFE2L3--NPY","7:NFE2L3:26153068:+:7:NPY:24289499:+:rev"]
["TCGA_ESCA","TCGA-V5-A7RC-01B","PQLC1--ZNF407","18:PQLC1:79943329:-:18:ZNF407:74630967:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","ALDOA--BCAR4","16:ALDOA:30064505:+:16:BCAR4:11820297:-:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","CDC27--CCT6B","17:CDC27:47189146:-:17:CCT6B:34954599:-:reg"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","USP32--CDK12","17:USP32:60301599:-:17:CDK12:39490557:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","KIAA0100--ERBB2","17:KIAA0100:28631479:-:17:ERBB2:39693261:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","LLGL2--FAM222B","17:LLGL2:75559410:+:17:FAM222B:28766707:-:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","STRADA--GRB2","17:STRADA:63713406:-:17:GRB2:75332797:-:rev"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","MMD--HDAC5","17:MMD:55421670:-:17:HDAC5:44088598:-:reg"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","NOL11--KIF19","17:NOL11:67724193:+:17:KIF19:74328425:+:reg"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","MED13--MYO15B","17:MED13:62063067:-:17:MYO15B:75610166:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","KIAA0100--PITPNC1","17:KIAA0100:28624233:-:17:PITPNC1:67692572:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","SUPT6H--PROCA1","17:SUPT6H:28690229:+:17:PROCA1:28704843:-:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","CORO7--RMI2","16:CORO7:4416459:-:16:RMI2:11316452:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","SUMO2--SLC16A5","17:SUMO2:75182814:-:17:SLC16A5:75089114:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","SSH2--SLC39A11","17:SSH2:29929938:-:17:SLC39A11:72736719:-:rev"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","GPATCH8--SUPT6H","17:GPATCH8:44503326:-:17:SUPT6H:28700173:+:strandcross"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","ZNF207--TANC2","17:ZNF207:32369745:+:17:TANC2:63398821:+:reg"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","SPAG9--TRIM37","17:SPAG9:50979746:-:17:TRIM37:59091340:-:rev"]
["TCGA_ESCA","TCGA-V5-A7RE-01A","CLTC--USP32","17:CLTC:59620173:+:17:USP32:60345608:-:strandcross"]
["TCGA_ESCA","TCGA-V5-AASW-01A","GNAQ--FBP1","9:GNAQ:78031100:-:9:FBP1:94620491:-:rev"]
["TCGA_ESCA","TCGA-V5-AASW-01A","AGTPBP1--GNAQ","9:AGTPBP1:85677436:-:9:GNAQ:77721513:-:reg"]
["TCGA_ESCA","TCGA-V5-AASW-01A","FAM129B--IDNK","9:FAM129B:127578922:-:9:IDNK:83628181:+:strandcross"]
["TCGA_ESCA","TCGA-V5-AASX-01A","FAM35A--SEZ6L2","10:FAM35A:87096989:+:16:SEZ6L2:29880064:-:fusion"]
["TCGA_ESCA","TCGA-V5-AASX-01A","SFMBT1--TTLL3","3:SFMBT1:52906113:-:3:TTLL3:9854559:+:strandcross"]
["TCGA_ESCA","TCGA-VR-A8EO-01A","UCHL5--SLC6A17","1:UCHL5:193049746:-:1:SLC6A17:110191972:+:strandcross"]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","RALGAPB--KCNB1","20:RALGAPB:38493132:+:20:KCNB1:49374992:-:strandcross"]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","DSC2--TAF4B","18:DSC2:31089439:-:18:TAF4B:26265170:+:strandcross"]
["TCGA_ESCA","TCGA-VR-A8EQ-01A","TMEM241--TRAPPC8","18:TMEM241:23368715:-:18:TRAPPC8:31897891:-:rev"]
["TCGA_ESCA","TCGA-VR-A8ER-01A","NUBPL--NPAS3","14:NUBPL:31826714:+:14:NPAS3:33367186:+:reg"]
["TCGA_ESCA","TCGA-VR-A8ER-01A","IFT80--TNIK","3:IFT80:160399146:-:3:TNIK:171228221:-:rev"]
["TCGA_ESCA","TCGA-VR-A8ET-01A","TBK1--RBM48","12:TBK1:64495775:+:7:RBM48:92532404:+:fusion"]
["TCGA_ESCA","TCGA-VR-A8EU-01A","OSBPL3--ANO1","7:OSBPL3:24979886:-:11:ANO1:70131919:+:fusion"]
["TCGA_ESCA","TCGA-VR-A8EU-01A","KIAA1644--CYP19A1","22:KIAA1644:44285428:-:15:CYP19A1:51242950:-:fusion"]
["TCGA_ESCA","TCGA-VR-A8EU-01A","COG5--LRGUK","7:COG5:107527237:-:7:LRGUK:134199220:+:strandcross"]
["TCGA_ESCA","TCGA-VR-A8EW-01A","GTF3C3--COL5A2","2:GTF3C3:196780559:-:2:COL5A2:189052802:-:reg"]
["TCGA_ESCA","TCGA-VR-A8EX-01A","RNF19A--F10","8:RNF19A:100287501:-:13:F10:113138457:+:fusion"]
["TCGA_ESCA","TCGA-VR-A8EY-01A","NPAS2--PACSIN2","2:NPAS2:100904786:+:22:PACSIN2:42884561:-:fusion"]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","DNMT1--AC011472.2","19:DNMT1:10148884:-:19:AC011472.2:11301236:-:rev"]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","LARS--RIC1","5:LARS:146140204:-:9:RIC1:5762541:+:fusion"]
["TCGA_ESCA","TCGA-VR-A8Q7-01A","TLE3--YWHAH","15:TLE3:70053227:-:22:YWHAH:31956139:+:fusion"]
["TCGA_ESCA","TCGA-VR-AA4D-01A","ACLY--NEUROD2","17:ACLY:41883122:-:17:NEUROD2:39606604:-:reg"]
["TCGA_ESCA","TCGA-VR-AA4G-01A","CTTN--SHANK2","11:CTTN:70409960:+:11:SHANK2:70502931:-:strandcross"]
["TCGA_ESCA","TCGA-VR-AA7B-01A","SUGCT--ARMC10","7:SUGCT:40496386:+:7:ARMC10:103097277:+:reg"]
["TCGA_ESCA","TCGA-VR-AA7B-01A","TSHZ2--SGK2","20:TSHZ2:52973333:+:20:SGK2:43569385:+:rev"]
["TCGA_ESCA","TCGA-VR-AA7B-01A","RAB21--SYT10","12:RAB21:71770699:+:12:SYT10:33385291:-:strandcross"]
["TCGA_ESCA","TCGA-VR-AA7B-01A","ZC3H7B--USP49","22:ZC3H7B:41332227:+:6:USP49:41807011:-:fusion"]
["TCGA_ESCA","TCGA-VR-AA7B-01A","PASD1--ZFX","X:PASD1:151648702:+:X:ZFX:24207326:+:rev"]
["TCGA_ESCA","TCGA-X8-AAAR-01A","ZNF207--C17orf75","17:ZNF207:32369745:+:17:C17orf75:32341284:-:strandcross"]
["TCGA_ESCA","TCGA-XP-A8T6-01A","ZNF420--DPF1","19:ZNF420:37091121:+:19:DPF1:38213756:-:strandcross"]
["TCGA_ESCA","TCGA-XP-A8T6-01A","ACER3--FCHSD2","11:ACER3:76861079:+:11:FCHSD2:72902638:-:strandcross"]
["TCGA_ESCA","TCGA-XP-A8T6-01A","KANSL1--KRT20","17:KANSL1:46066537:-:17:KRT20:40882654:-:reg"]
["TCGA_ESCA","TCGA-XP-A8T6-01A","HNF4G--TERF2","8:HNF4G:75407964:+:16:TERF2:69372355:-:fusion"]
["TCGA_ESCA","TCGA-XP-A8T8-01A","GATAD2A--CHST1","19:GATAD2A:19465614:+:11:CHST1:45652606:-:fusion"]
["TCGA_ESCA","TCGA-XP-A8T8-01A","DACH1--KLF12","13:DACH1:71865922:-:13:KLF12:73695671:-:rev"]
["TCGA_ESCA","TCGA-Z6-A8JD-01A","ITPR2--LRMP","12:ITPR2:26387434:-:12:LRMP:25062820:+:strandcross"]
["TCGA_ESCA","TCGA-Z6-A8JE-01A","RASSF8--CASC1","12:RASSF8:25995130:+:12:CASC1:25149774:-:strandcross"]
["TCGA_ESCA","TCGA-Z6-A9VB-01A","NADSYN1--DHCR7","11:NADSYN1:71491903:+:11:DHCR7:71444958:-:strandcross"]
["TCGA_ESCA","TCGA-Z6-AAPN-01A","RALA--HOXA11-AS","7:RALA:39623825:+:7:HOXA11-AS:27188601:+:rev"]
["TCGA_ESCA","TCGA-Z6-AAPN-01A","PMS1--RAPGEF4","2:PMS1:189784593:+:2:RAPGEF4:173016349:+:rev"]
["TCGA_ESCA","TCGA-Z6-AAPN-01A","EXT1--TSNARE1","8:EXT1:118110085:-:8:TSNARE1:142212313:-:rev"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","PIEZO1--CBFA2T3","16:PIEZO1:88749384:CBFA2T3:88901656:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","ELF2--MGARP","4:ELF2:139060324:MGARP:139268765:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","RHOT2--RAB11FIP3","16:RHOT2:668699:RAB11FIP3:471295:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","PPP1CA--TMEM134","11:PPP1CA:67401728:TMEM134:67467388:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GG-01A","ST5--TMEM9B","11:ST5:8810517:TMEM9B:8956298:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GI-01A","MAN2B1--FBXW9","19:MAN2B1:12649136:FBXW9:12691454:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","GOSR1--CPD","17:GOSR1:30484770:CPD:30461180:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","TNFRSF11A--KIAA1468","18:TNFRSF11A:62325427:KIAA1468:62244764:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","KDM4A--MPL","1:KDM4A:43669299:MPL:43338099:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","DDAH2--SLC44A4","6:DDAH2:31730051:SLC44A4:31865784:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GJ-01A","TXNDC11--ZC3H7A","16:TXNDC11:11721577:ZC3H7A:11769095:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","NDE1--C16orf45","16:NDE1:15696860:C16orf45:15515305:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","ALYREF--CCDC57","17:ALYREF:81889182:CCDC57:82128597:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","LTA4H--CDK17","12:LTA4H:96006314:CDK17:96300360:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","MRPS16--CFAP70","10:MRPS16:73251763:CFAP70:73256416:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","GNAI3--CYB561D1","1:GNAI3:109586882:CYB561D1:109495143:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","SMARCA4--DNM2","19:SMARCA4:10961174:DNM2:10805916:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","AIFM2--LRRC20","10:AIFM2:70114145:LRRC20:70340702:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","INTS4--NDUFC2-KCTD14","11:INTS4:77978996:NDUFC2-KCTD14:78017270:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","NCOR2--SCARB1","12:NCOR2:124535565:SCARB1:124778586:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","UHRF1BP1--SNRPC","6:UHRF1BP1:34792294:SNRPC:34770291:rev:+"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","PANK4--TTC34","1:PANK4:2509862:TTC34:2645563:rev:-"]
["TCGA_ESCA","TCGA-2H-A9GN-01A","TRPC4AP--UQCC1","20:TRPC4AP:35044505:UQCC1:35306779:rev:-"]
["TCGA_ESCA","TCGA-IG-A97H-01A","PPP1R2--APOD","3:PPP1R2:195542904:APOD:195579495:rev:-"]
["TCGA_ESCA","TCGA-IG-A97H-01A","PPM1G--IFT172","2:PPM1G:27409303:IFT172:27459522:rev:-"]
["TCGA_ESCA","TCGA-IG-A97H-01A","SCD5--SEC31A","4:SCD5:82798306:SEC31A:82867316:rev:-"]
["TCGA_ESCA","TCGA-JY-A6F8-01A","PVT1--PCAT1","8:PVT1:127855319:PCAT1:127019644:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FA-01A","MBTPS1--TAF1C","16:MBTPS1:84087358:TAF1C:84180344:rev:-"]
["TCGA_ESCA","TCGA-JY-A6FD-01A","DSP--LY86","6:DSP:7542085:LY86:6649625:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","SLC16A9--CCDC6","10:SLC16A9:59709479:CCDC6:59793111:rev:-"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","U2AF2--KIR3DL2","19:U2AF2:55659345:KIR3DL2:54851998:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","C10orf76--LDB1","10:C10orf76:101939863:LDB1:102111536:rev:-"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","IQGAP1--NGRN","15:IQGAP1:90390873:NGRN:90271188:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","LRRC37B--RAB11FIP4","17:LRRC37B:32008132:RAB11FIP4:31517651:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","ITGA7--RNF41","12:ITGA7:55697695:RNF41:56216613:rev:-"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","CYB561D2--SLC38A3","3:CYB561D2:50351560:SLC38A3:50214149:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","SMARCA4--SLC44A2","19:SMARCA4:10996544:SLC44A2:10634756:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","COG3--TPT1-AS1","13:COG3:45480290:TPT1-AS1:45391032:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","NR1D2--UBE2E1","3:NR1D2:23968023:UBE2E1:23887567:rev:+"]
["TCGA_ESCA","TCGA-JY-A6FH-01A","RABEP1--ZFP3","17:RABEP1:5332152:ZFP3:5091497:rev:+"]
["TCGA_ESCA","TCGA-JY-A939-01A","TRIM26--DHX16","6:TRIM26:30213305:DHX16:30657092:rev:-"]
["TCGA_ESCA","TCGA-L5-A43C-01A","IMPA2--GNAL","18:IMPA2:11981765:GNAL:11862395:rev:+"]
["TCGA_ESCA","TCGA-L5-A43C-01A","AXIN1--TMEM8A","16:AXIN1:297056:TMEM8A:372283:rev:-"]
["TCGA_ESCA","TCGA-L5-A43I-01A","MECOM--ACTRT3","3:MECOM:169663336:ACTRT3:169768350:rev:-"]
["TCGA_ESCA","TCGA-L5-A43I-01A","GGA1--CDC42EP1","22:GGA1:37616997:CDC42EP1:37566072:rev:+"]
["TCGA_ESCA","TCGA-L5-A43I-01A","TTC7A--SOCS5","2:TTC7A:46950526:SOCS5:46758519:rev:+"]
["TCGA_ESCA","TCGA-L5-A43I-01A","NEMF--SOS2","14:NEMF:49813988:SOS2:50145596:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","CREBBP--ADCY9","16:CREBBP:3879832:ADCY9:3993510:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","ASXL2--HADHA","2:ASXL2:25878166:HADHA:26209889:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","AIFM2--LRRC20","10:AIFM2:70123405:LRRC20:70301508:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","CSNK1A1--PDE6A","5:CSNK1A1:149505447:PDE6A:149884867:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","PPP6R1--SBK3","19:PPP6R1:55230613:SBK3:55541526:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","NCOR2--SCARB1","12:NCOR2:124518140:SCARB1:124817707:rev:-"]
["TCGA_ESCA","TCGA-L5-A43M-01A","CADM4--SMG9","19:CADM4:43639727:SMG9:43750747:rev:-"]
["TCGA_ESCA","TCGA-L5-A4ON-01A","PTPRH--HSPBP1","19:PTPRH:55196522:HSPBP1:55274622:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","VPS33A--ABCB9","12:VPS33A:122249871:ABCB9:122950565:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","NUP214--ABL1","9:NUP214:131151894:ABL1:130872129:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","BIRC5--AFMID","17:BIRC5:78214789:AFMID:78202499:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PPARD--ANKS1A","6:PPARD:35347150:ANKS1A:34981690:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","ZBTB17--ARHGEF19","1:ZBTB17:15946935:ARHGEF19:16205425:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SMURF1--ATP5J2-PTCD1","7:SMURF1:99143726:ATP5J2-PTCD1:99429806:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","ZC3H7A--BCAR4","16:ZC3H7A:11797124:BCAR4:11820297:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PIEZO1--CBFA2T3","16:PIEZO1:88749384:CBFA2T3:88901656:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","OLA1--CIR1","2:OLA1:174223033:CIR1:174351725:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","STRBP--DENND1A","9:STRBP:123268436:DENND1A:123383913:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","CTNNA1--EGR1","5:CTNNA1:138827718:EGR1:138466757:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","NMT2--FAM171A1","10:NMT2:15168503:FAM171A1:15284105:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SEC31A--FAM175A","4:SEC31A:82891088:FAM175A:83482244:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","TJP2--FXN","9:TJP2:69151771:FXN:69046385:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PRTFDC1--GPR158-AS1","10:PRTFDC1:24937184:GPR158-AS1:25159903:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","TTLL5--JDP2","14:TTLL5:75793100:JDP2:75461426:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SNX30--KIAA1958","9:SNX30:112751157:KIAA1958:112645650:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","RAD54L--MAST2","1:RAD54L:46250119:MAST2:46032596:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SMC3--MXI1","10:SMC3:110590572:MXI1:110279180:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","FAM222B--MYO18A","17:FAM222B:28834293:MYO18A:29082438:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","ADNP--NFATC2","20:ADNP:50930826:NFATC2:51398730:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","CARS--OSBPL5","11:CARS:3047753:OSBPL5:3094334:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","FAM222B--PHF12","17:FAM222B:28842682:PHF12:28910369:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","SNX27--PIP5K1A","1:SNX27:151612512:PIP5K1A:151234197:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","TRPC4AP--RBM39","20:TRPC4AP:35078046:RBM39:35716805:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PACSIN2--SCUBE1","22:PACSIN2:42912021:SCUBE1:43320065:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PTK2--SLC45A4","8:PTK2:140890543:SLC45A4:141221765:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PXN--SRSF9","12:PXN:120222549:SRSF9:120465787:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","TUBB3--TCF25","16:TUBB3:89933578:TCF25:89910591:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","NCOA6--TRPC4AP","20:NCOA6:34825472:TRPC4AP:35049994:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","EEA1--UBE2N","12:EEA1:92929043:UBE2N:93411299:rev:-"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","FAM118A--UPK3A","22:FAM118A:45310183:UPK3A:45285941:rev:+"]
["TCGA_ESCA","TCGA-L5-A4OQ-01A","PRPF3--VPS45","1:PRPF3:150340477:VPS45:150144709:rev:+"]
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["TCGA_HNSC","TCGA-BA-4076-01A","AIG1--AL133346.1","6:AIG1:143165183:+:6:AL133346.1:132077208:+:rev"]
["TCGA_HNSC","TCGA-BA-4076-01A","PHACTR2--PLAGL1","6:PHACTR2:143678209:+:6:PLAGL1:143968978:-:strandcross"]
["TCGA_HNSC","TCGA-BA-4077-01B","IRF6--C1orf21","1:IRF6:209796348:-:1:C1orf21:184619518:+:strandcross"]
["TCGA_HNSC","TCGA-BA-4077-01B","WDR36--NREP","5:WDR36:111092618:+:5:NREP:111755830:-:strandcross"]
["TCGA_HNSC","TCGA-BA-4077-01B","NSMCE2--PACRG","8:NSMCE2:125102487:+:6:PACRG:162814147:+:fusion"]
["TCGA_HNSC","TCGA-BA-4078-01A","PTK7--ANKS1A","6:PTK7:43076567:+:6:ANKS1A:34967239:+:rev"]
["TCGA_HNSC","TCGA-BA-5153-01A","TRIO--PPP2R5E","5:TRIO:14280436:+:14:PPP2R5E:63382157:-:fusion"]
["TCGA_HNSC","TCGA-BA-5153-01A","ARIH2--TRIO","3:ARIH2:48918998:+:5:TRIO:14286871:+:fusion"]
["TCGA_HNSC","TCGA-BA-5555-01A","EBPL--LPAR6","13:EBPL:49691254:-:13:LPAR6:48389812:-:reg"]
["TCGA_HNSC","TCGA-BA-5559-01A","YIF1B--SAMD12","19:YIF1B:38309405:-:8:SAMD12:118439961:-:fusion"]
["TCGA_HNSC","TCGA-BA-5559-01A","SAMD12--SAMHD1","8:SAMD12:118580715:-:20:SAMHD1:36916830:-:fusion"]
["TCGA_HNSC","TCGA-BA-5559-01A","SAMHD1--YIF1B","20:SAMHD1:36919364:-:19:YIF1B:38305507:-:fusion"]
["TCGA_HNSC","TCGA-BA-6868-01B","MRPS28--MAMDC2","8:MRPS28:80002999:-:9:MAMDC2:70108211:+:fusion"]
["TCGA_HNSC","TCGA-BA-6868-01B","MAMDC2--MRPS28","9:MAMDC2:70131612:+:8:MRPS28:79919148:-:fusion"]
["TCGA_HNSC","TCGA-BA-6868-01B","LAMB1--PUS7","7:LAMB1:107986022:-:7:PUS7:105457926:-:reg"]
["TCGA_HNSC","TCGA-BA-6869-01A","RAI1--PEMT","17:RAI1:17724159:+:17:PEMT:17577027:-:strandcross"]
["TCGA_HNSC","TCGA-BA-6869-01A","PEMT--RAI1","17:PEMT:17576920:-:17:RAI1:17724028:+:strandcross"]
["TCGA_HNSC","TCGA-BA-6870-01A","LINC00476--RNF216","9:LINC00476:95874980:-:7:RNF216:5715190:-:fusion"]
["TCGA_HNSC","TCGA-BA-6871-01A","SCNN1A--DCP1B","12:SCNN1A:6348727:-:12:DCP1B:1946286:-:reg"]
["TCGA_HNSC","TCGA-BA-6871-01A","NR4A1--IL20RB","12:NR4A1:52041929:+:3:IL20RB:136980466:+:fusion"]
["TCGA_HNSC","TCGA-BA-6871-01A","BAIAP2--TBCD","17:BAIAP2:81086580:+:17:TBCD:82889668:+:reg"]
["TCGA_HNSC","TCGA-BA-6872-01A","EGFR--DYM","7:EGFR:55019365:+:18:DYM:49391645:-:fusion"]
["TCGA_HNSC","TCGA-BA-7269-01A","MARK2--BPIFA2","11:MARK2:63839560:+:20:BPIFA2:33178147:+:fusion"]
["TCGA_HNSC","TCGA-BA-7269-01A","TAOK1--PARD6G","17:TAOK1:29467216:+:18:PARD6G:80183150:-:fusion"]
["TCGA_HNSC","TCGA-BA-7269-01A","FOXN2--PLB1","2:FOXN2:48314814:+:2:PLB1:28640927:+:rev"]
["TCGA_HNSC","TCGA-BB-4217-01A","TUBD1--INPP5D","17:TUBD1:59886083:-:2:INPP5D:233182410:+:fusion"]
["TCGA_HNSC","TCGA-BB-4217-01A","EAPP--USP13","14:EAPP:34524697:-:3:USP13:179730189:+:fusion"]
["TCGA_HNSC","TCGA-BB-4223-01A","CASZ1--AL357140.1","1:CASZ1:10693874:-:1:AL357140.1:9848318:+:strandcross"]
["TCGA_HNSC","TCGA-BB-4223-01A","OBSCN--CASZ1","1:OBSCN:228224734:+:1:CASZ1:10665571:-:strandcross"]
["TCGA_HNSC","TCGA-BB-4223-01A","SPG11--JMJD7","15:SPG11:44588567:-:15:JMJD7:41834740:+:strandcross"]
["TCGA_HNSC","TCGA-BB-4223-01A","SPG11--JMJD7-PLA2G4B","15:SPG11:44588567:-:15:JMJD7-PLA2G4B:41834740:+:strandcross"]
["TCGA_HNSC","TCGA-BB-4223-01A","FAM69A--LRRC8D","1:FAM69A:92961376:-:1:LRRC8D:89843638:+:strandcross"]
["TCGA_HNSC","TCGA-BB-4223-01A","ATP11B--NAALADL2","3:ATP11B:182869331:+:3:NAALADL2:175655481:+:rev"]
["TCGA_HNSC","TCGA-BB-4223-01A","PAN3--NTRK2","13:PAN3:28139087:+:9:NTRK2:84934162:+:fusion"]
["TCGA_HNSC","TCGA-BB-4224-01A","PACS2--DIO3OS","14:PACS2:105352467:+:14:DIO3OS:101552754:-:strandcross"]
["TCGA_HNSC","TCGA-BB-4225-01A","DIEXF--AC092810.3","1:DIEXF:209842447:+:1:AC092810.3:209147594:-:strandcross"]
["TCGA_HNSC","TCGA-BB-4225-01A","KCNQ1--METTL15","11:KCNQ1:2445484:+:11:METTL15:28526478:+:reg"]
["TCGA_HNSC","TCGA-CN-4723-01A","CACNA2D1--NAALADL2","7:CACNA2D1:82335135:-:3:NAALADL2:175737306:+:fusion"]
["TCGA_HNSC","TCGA-CN-4725-01A","ZNF236--ZNF627","18:ZNF236:76881512:+:19:ZNF627:11614527:+:fusion"]
["TCGA_HNSC","TCGA-CN-4733-01A","RCL1--PLGRKT","9:RCL1:4793227:+:9:PLGRKT:5361888:-:strandcross"]
["TCGA_HNSC","TCGA-CN-4733-01A","EPB41L1--TGM3","20:EPB41L1:36092813:+:20:TGM3:2309657:+:rev"]
["TCGA_HNSC","TCGA-CN-4735-01A","PSD3--ANO1","8:PSD3:18867674:-:11:ANO1:70087752:+:fusion"]
["TCGA_HNSC","TCGA-CN-4735-01A","TRAF3--CDC42BPB","14:TRAF3:102830472:+:14:CDC42BPB:102983756:-:strandcross"]
["TCGA_HNSC","TCGA-CN-4735-01A","CDC42BPB--PPP4R3A","14:CDC42BPB:103003928:-:14:PPP4R3A:91461607:-:reg"]
["TCGA_HNSC","TCGA-CN-4736-01A","MAP3K5--ARFIP1","6:MAP3K5:136791710:-:4:ARFIP1:152872452:+:fusion"]
["TCGA_HNSC","TCGA-CN-4739-01A","AC098820.1--PSMD1","2:AC098820.1:216498607:-:2:PSMD1:231146240:+:strandcross"]
["TCGA_HNSC","TCGA-CN-4742-01A","ELMSAN1--ANO1","14:ELMSAN1:73729640:-:11:ANO1:70111707:+:fusion"]
["TCGA_HNSC","TCGA-CN-4742-01A","NCKAP1--PARD3","2:NCKAP1:183023806:-:10:PARD3:34696419:-:fusion"]
["TCGA_HNSC","TCGA-CN-5355-01A","HMGXB3--CAPN1","5:HMGXB3:150001179:+:11:CAPN1:65204683:+:fusion"]
["TCGA_HNSC","TCGA-CN-5359-01A","LAMB1--ATXN7L1","7:LAMB1:107986022:-:7:ATXN7L1:105761463:-:reg"]
["TCGA_HNSC","TCGA-CN-5359-01A","NEDD4L--CDH19","18:NEDD4L:58165861:+:18:CDH19:66572316:-:strandcross"]
["TCGA_HNSC","TCGA-CN-5359-01A","COBLL1--RAPGEF4-AS1","2:COBLL1:164779655:-:2:RAPGEF4-AS1:172679025:-:rev"]
["TCGA_HNSC","TCGA-CN-5363-01A","CD44--AC090692.1","11:CD44:35139370:+:11:AC090692.1:35918114:-:strandcross"]
["TCGA_HNSC","TCGA-CN-5364-01A","PTPN1--P2RX4","20:PTPN1:50510590:+:12:P2RX4:121217134:+:fusion"]
["TCGA_HNSC","TCGA-CN-5366-01A","ESPN--FBLIM1","1:ESPN:6460110:+:1:FBLIM1:15784548:+:reg"]
["TCGA_HNSC","TCGA-CN-5367-01A","PDLIM5--AF250324.1","4:PDLIM5:94640450:+:4:AF250324.1:189821665:-:strandcross"]
["TCGA_HNSC","TCGA-CN-5367-01A","FCHSD2--GUCY1A2","11:FCHSD2:73140031:-:11:GUCY1A2:106986131:-:rev"]
["TCGA_HNSC","TCGA-CN-5367-01A","RUNX2--MAX","6:RUNX2:45432019:+:14:MAX:65078036:-:fusion"]
["TCGA_HNSC","TCGA-CN-5367-01A","MAX--RUNX2","14:MAX:65093708:-:6:RUNX2:45437947:+:fusion"]
["TCGA_HNSC","TCGA-CN-5369-01A","PEPD--LIPE-AS1","19:PEPD:33462995:-:19:LIPE-AS1:42525618:+:strandcross"]
["TCGA_HNSC","TCGA-CN-5370-01A","EFTUD2--KRT24","17:EFTUD2:44879556:-:17:KRT24:40701933:-:reg"]
["TCGA_HNSC","TCGA-CN-5370-01A","THBS1--NRG1","15:THBS1:39584422:+:8:NRG1:32727949:+:fusion"]
["TCGA_HNSC","TCGA-CN-5370-01A","FOXN1--PRKDC","17:FOXN1:28506443:+:8:PRKDC:47785317:-:fusion"]
["TCGA_HNSC","TCGA-CN-5370-01A","FOXP1--PXDNL","3:FOXP1:71493426:-:8:PXDNL:51499770:-:fusion"]
["TCGA_HNSC","TCGA-CN-6010-01A","MAPK10--CCSER1","4:MAPK10:86453030:-:4:CCSER1:90308244:+:strandcross"]
["TCGA_HNSC","TCGA-CN-6016-01A","ZNF277--LINC01393","7:ZNF277:112206807:+:7:LINC01393:115125443:+:reg"]
["TCGA_HNSC","TCGA-CN-6020-01A","NSD3--AC084024.3","8:NSD3:38304587:-:8:AC084024.3:38163310:+:strandcross"]
["TCGA_HNSC","TCGA-CN-6020-01A","NSD3--ASH2L","8:NSD3:38304587:-:8:ASH2L:38143739:+:strandcross"]
["TCGA_HNSC","TCGA-CN-6020-01A","MIRLET7BHG--SCUBE1","22:MIRLET7BHG:46098558:+:22:SCUBE1:43339235:-:strandcross"]
["TCGA_HNSC","TCGA-CN-6024-01A","CBFA2T2--HM13","20:CBFA2T2:33490301:+:20:HM13:31544947:+:rev"]
["TCGA_HNSC","TCGA-CN-6992-01A","TPX2--UNC5D","20:TPX2:31742647:+:8:UNC5D:35549292:+:fusion"]
["TCGA_HNSC","TCGA-CN-6997-01A","LYN--NTRK3","8:LYN:55953984:+:15:NTRK3:88033045:-:fusion"]
["TCGA_HNSC","TCGA-CQ-5323-01A","CPT1A--SHANK2","11:CPT1A:68773265:-:11:SHANK2:71147338:-:rev"]
["TCGA_HNSC","TCGA-CQ-5331-01A","IGHV7-81--TRAC","14:IGHV7-81:106874972:-:14:TRAC:22547506:+:strandcross"]
["TCGA_HNSC","TCGA-CQ-5332-01A","OSBPL1A--RIOK3","18:OSBPL1A:24225042:-:18:RIOK3:23474948:+:strandcross"]
["TCGA_HNSC","TCGA-CQ-5334-01A","PDE7A--NRG1","8:PDE7A:65779720:-:8:NRG1:32727949:+:strandcross"]
["TCGA_HNSC","TCGA-CQ-6221-01A","SGCD--LCP2","5:SGCD:156344677:+:5:LCP2:170293372:-:strandcross"]
["TCGA_HNSC","TCGA-CQ-6224-01A","PTPRD--CYGB","9:PTPRD:9938507:-:17:CYGB:76531142:-:fusion"]
["TCGA_HNSC","TCGA-CQ-6224-01A","ALG8--FGF19","11:ALG8:78124021:-:11:FGF19:69699576:-:reg"]
["TCGA_HNSC","TCGA-CQ-6225-01A","EIF2AK4--EPB42","15:EIF2AK4:39939617:+:15:EPB42:43203275:-:strandcross"]
["TCGA_HNSC","TCGA-CQ-6227-01A","FRMD6--BPIFB1","14:FRMD6:51489420:+:20:BPIFB1:33286033:+:fusion"]
["TCGA_HNSC","TCGA-CQ-6228-01A","PANX1--CEP126","11:PANX1:94153630:+:11:CEP126:101944265:+:reg"]
["TCGA_HNSC","TCGA-CQ-6228-01A","NCOA2--DCUN1D5","8:NCOA2:70403700:-:11:DCUN1D5:103083326:-:fusion"]
["TCGA_HNSC","TCGA-CQ-6228-01A","LYST--DISC1","1:LYST:235716712:-:1:DISC1:231795242:+:strandcross"]
["TCGA_HNSC","TCGA-CQ-6228-01A","GALK2--TERB2","15:GALK2:49292537:+:15:TERB2:44978489:+:rev"]
["TCGA_HNSC","TCGA-CQ-6228-01A","LYST--TSNAX-DISC1","1:LYST:235716712:-:1:TSNAX-DISC1:231795242:+:strandcross"]
["TCGA_HNSC","TCGA-CQ-6229-01A","SYNE2--ITPK1","14:SYNE2:64020093:+:14:ITPK1:92993997:-:strandcross"]
["TCGA_HNSC","TCGA-CQ-7065-01A","BACH1--DSCR3","21:BACH1:29329693:+:21:DSCR3:37240639:-:strandcross"]
["TCGA_HNSC","TCGA-CQ-7065-01A","NOTCH2--SPAG17","1:NOTCH2:120069334:-:1:SPAG17:117973561:-:reg"]
["TCGA_HNSC","TCGA-CQ-7065-01A","NXN--WRAP53","17:NXN:979319:-:17:WRAP53:7700741:+:strandcross"]
["TCGA_HNSC","TCGA-CR-5247-01A","CLN3--C15orf32","16:CLN3:28484006:-:15:C15orf32:92500358:+:fusion"]
["TCGA_HNSC","TCGA-CR-5247-01A","TFDP2--COG5","3:TFDP2:142028579:-:7:COG5:107324521:-:fusion"]
["TCGA_HNSC","TCGA-CR-5248-01A","ZMIZ1--AL139095.4","10:ZMIZ1:79069270:+:6:AL139095.4:7276031:+:fusion"]
["TCGA_HNSC","TCGA-CR-6467-01A","LARP1--AC109466.1","5:LARP1:154756193:+:5:AC109466.1:164354141:+:reg"]
["TCGA_HNSC","TCGA-CR-6467-01A","TTC12--LUC7L2","11:TTC12:113344440:+:7:LUC7L2:139412551:+:fusion"]
["TCGA_HNSC","TCGA-CR-6473-01A","ARHGAP32--AP002986.1","11:ARHGAP32:128988023:-:11:AP002986.1:130323914:+:strandcross"]
["TCGA_HNSC","TCGA-CR-6474-01A","MVP--ZNF267","16:MVP:29831073:+:16:ZNF267:31914476:+:reg"]
["TCGA_HNSC","TCGA-CR-6478-01A","GPI--EYS","19:GPI:34396430:+:6:EYS:65057727:-:fusion"]
["TCGA_HNSC","TCGA-CR-6478-01A","TMBIM4--TMEM131","12:TMBIM4:66169855:-:2:TMEM131:97814388:-:fusion"]
["TCGA_HNSC","TCGA-CR-6478-01A","HSD17B12--TP53I11","11:HSD17B12:43816391:+:11:TP53I11:44939190:-:strandcross"]
["TCGA_HNSC","TCGA-CR-6478-01A","KIF21A--TSPAN8","12:KIF21A:39442927:-:12:TSPAN8:71157787:-:rev"]
["TCGA_HNSC","TCGA-CR-6484-01A","PRRG4--AC010884.1","11:PRRG4:32836821:+:2:AC010884.1:104945077:-:fusion"]
["TCGA_HNSC","TCGA-CR-6484-01A","AGAP1--UBE2F","2:AGAP1:235494849:+:2:UBE2F:237973092:+:reg"]
["TCGA_HNSC","TCGA-CR-6487-01A","SNHG19--CSF1R","16:SNHG19:2155143:-:5:CSF1R:150086607:-:fusion"]
["TCGA_HNSC","TCGA-CR-6487-01A","TSC1--DOLPP1","9:TSC1:132921363:-:9:DOLPP1:129086709:+:strandcross"]
["TCGA_HNSC","TCGA-CR-6488-01A","CREB3--TLN1","9:CREB3:35733282:+:9:TLN1:35725727:-:strandcross"]
["TCGA_HNSC","TCGA-CR-7364-01A","ASH2L--C8orf86","8:ASH2L:38110833:+:8:C8orf86:38516512:-:strandcross"]
["TCGA_HNSC","TCGA-CR-7367-01A","DYRK1A--AP000432.3","21:DYRK1A:37472880:+:21:AP000432.3:17626893:+:rev"]
["TCGA_HNSC","TCGA-CR-7367-01A","DIP2A--RUNX1","21:DIP2A:46459222:+:21:RUNX1:35580929:-:strandcross"]
["TCGA_HNSC","TCGA-CR-7370-01A","UBA1--LINC01204","X:UBA1:47190950:+:X:LINC01204:45602297:+:rev"]
["TCGA_HNSC","TCGA-CR-7372-01A","ADAM9--DOCK5","8:ADAM9:38997160:+:8:DOCK5:25292024:+:rev"]
["TCGA_HNSC","TCGA-CR-7372-01A","SIK1--HUNK","21:SIK1:43425407:-:21:HUNK:31940165:+:strandcross"]
["TCGA_HNSC","TCGA-CR-7374-01A","CREBBP--ATG10","16:CREBBP:3850297:-:5:ATG10:82058495:+:fusion"]
["TCGA_HNSC","TCGA-CR-7377-01A","ILF3--AC008567.3","19:ILF3:10671535:+:19:AC008567.3:9539406:+:rev"]
["TCGA_HNSC","TCGA-CR-7377-01A","PARD3--ARMC4","10:PARD3:34814876:-:10:ARMC4:27907777:-:reg"]
["TCGA_HNSC","TCGA-CR-7379-01A","NUDT3--CDH12","6:NUDT3:34392264:-:5:CDH12:21817132:-:fusion"]
["TCGA_HNSC","TCGA-CR-7383-01A","DCUN1D4--GPM6B","4:DCUN1D4:51863709:+:X:GPM6B:13785808:-:fusion"]
["TCGA_HNSC","TCGA-CR-7386-01A","MAP2K5--RAB27A","15:MAP2K5:67543470:+:15:RAB27A:55234956:-:strandcross"]
["TCGA_HNSC","TCGA-CR-7388-01A","RAP1GDS1--GSTCD","4:RAP1GDS1:98352601:+:4:GSTCD:105845441:+:reg"]
["TCGA_HNSC","TCGA-CR-7389-01A","UBE3C--PTPRN2","7:UBE3C:157139338:+:7:PTPRN2:158205273:-:strandcross"]
["TCGA_HNSC","TCGA-CR-7390-01A","SHC1--AL691442.1","1:SHC1:154965543:-:1:AL691442.1:155085091:+:strandcross"]
["TCGA_HNSC","TCGA-CR-7397-01A","ITCH--CASS4","20:ITCH:34424525:+:20:CASS4:56445900:+:reg"]
["TCGA_HNSC","TCGA-CR-7397-01A","ADAM23--PLPP1","2:ADAM23:206567322:+:5:PLPP1:55425334:-:fusion"]
["TCGA_HNSC","TCGA-CR-7397-01A","SCMH1--SHISA5","1:SCMH1:41186121:-:3:SHISA5:48501293:-:fusion"]
["TCGA_HNSC","TCGA-CR-7399-01A","DGCR2--ANO1","22:DGCR2:19122128:-:11:ANO1:70103066:+:fusion"]
["TCGA_HNSC","TCGA-CR-7399-01A","AK3--RCL1","9:AK3:4722506:-:9:RCL1:4823548:+:strandcross"]
["TCGA_HNSC","TCGA-CR-7402-01A","ZNF534--ATF5","19:ZNF534:52431489:+:19:ATF5:49929243:+:rev"]
["TCGA_HNSC","TCGA-CV-5431-01A","TUBGCP3--AC006148.1","13:TUBGCP3:112587905:-:7:AC006148.1:124352816:+:fusion"]
["TCGA_HNSC","TCGA-CV-5431-01A","FBXL20--UNC45B","17:FBXL20:39401361:-:17:UNC45B:35171322:+:strandcross"]
["TCGA_HNSC","TCGA-CV-5432-01A","EXOC6B--AC092650.1","2:EXOC6B:72741304:-:2:AC092650.1:47943612:-:reg"]
["TCGA_HNSC","TCGA-CV-5434-01A","ROCK1--DCC","18:ROCK1:21006351:-:18:DCC:53386043:+:strandcross"]
["TCGA_HNSC","TCGA-CV-5434-01A","NLK--RAD51D","17:NLK:28043331:+:17:RAD51D:35106481:-:strandcross"]
["TCGA_HNSC","TCGA-CV-5434-01A","PTPRZ1--TSPAN33","7:PTPRZ1:122055087:+:7:TSPAN33:129161679:+:reg"]
["TCGA_HNSC","TCGA-CV-5436-01A","SLC24A3--LINC01706","20:SLC24A3:19281087:+:20:LINC01706:7360621:+:rev"]
["TCGA_HNSC","TCGA-CV-5436-01A","SLX4IP--SLC24A3","20:SLX4IP:10458231:+:20:SLC24A3:19280959:+:reg"]
["TCGA_HNSC","TCGA-CV-5440-01A","FHOD3--MS4A15","18:FHOD3:36687178:+:11:MS4A15:60763706:+:fusion"]
["TCGA_HNSC","TCGA-CV-5440-01A","USP8--MYEF2","15:USP8:50490525:+:15:MYEF2:48168839:-:strandcross"]
["TCGA_HNSC","TCGA-CV-5440-01A","DTD1--RALGAPA2","20:DTD1:18628233:+:20:RALGAPA2:20546832:-:strandcross"]
["TCGA_HNSC","TCGA-CV-5443-01A","ITCH--DEFB118","20:ITCH:34471515:+:20:DEFB118:31372857:+:rev"]
["TCGA_HNSC","TCGA-CV-5443-01A","TM9SF4--FO393401.1","20:TM9SF4:32143105:+:20:FO393401.1:35477945:-:strandcross"]
["TCGA_HNSC","TCGA-CV-5443-01A","SLC26A11--OAF","17:SLC26A11:80237594:+:11:OAF:120228868:+:fusion"]
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["TCGA_SARC","TCGA-3B-A9HO-01A","KSR2--CEP290","12:KSR2:117761011:-:12:CEP290:88050433:-:reg"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SEMA5A--DAP","5:SEMA5A:9054087:-:5:DAP:10683571:-:rev"]
["TCGA_SARC","TCGA-3B-A9HO-01A","PPP1R12A--DNAH10","12:PPP1R12A:79934695:-:12:DNAH10:123818950:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","TTC28--EWSR1","22:TTC28:28629552:-:22:EWSR1:29298733:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","PSMC4--FRS2","19:PSMC4:39980717:+:12:FRS2:69486202:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SGSM1--GAL3ST1","22:SGSM1:24859840:+:22:GAL3ST1:30557401:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","MTERF3--HSD17B6","8:MTERF3:96250906:-:12:HSD17B6:56773834:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SPATC1L--IGF1","21:SPATC1L:46184356:-:12:IGF1:102419690:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","CPQ--KSR2","8:CPQ:96645402:+:12:KSR2:117860431:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","ALDH2--LIN7A","12:ALDH2:111767096:+:12:LIN7A:80848322:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","ATP2B1--LIN7A","12:ATP2B1:89609937:-:12:LIN7A:80889369:-:reg"]
["TCGA_SARC","TCGA-3B-A9HO-01A","DNAH10--LIN7A","12:DNAH10:123838689:+:12:LIN7A:80845939:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","PDXK--LIN7A","21:PDXK:43743807:+:12:LIN7A:80889369:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SDC2--LIN7A","8:SDC2:96494043:+:12:LIN7A:80889369:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SLC41A2--LIN7A","12:SLC41A2:104958088:-:12:LIN7A:80848322:-:reg"]
["TCGA_SARC","TCGA-3B-A9HO-01A","MYO10--LINC00316","5:MYO10:16877609:-:21:LINC00316:45338878:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","LIN7A--LINC01432","12:LIN7A:80845730:-:20:LINC01432:22073388:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SGSM1--LINC01547","22:SGSM1:24806484:+:21:LINC01547:44935890:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","UBAP2L--LINC01592","1:UBAP2L:154237136:+:8:LINC01592:68924495:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","CIT--LYZ","12:CIT:119803206:-:12:LYZ:69350108:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","C12orf40--MTERF3","12:C12orf40:39754332:+:8:MTERF3:96258700:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","DAP--MTERF3","5:DAP:10761014:-:8:MTERF3:96239685:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","LIN7A--NUP107","12:LIN7A:80889251:-:12:NUP107:68741813:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","MDM2--OS9","12:MDM2:68809292:+:12:OS9:57716089:+:rev"]
["TCGA_SARC","TCGA-3B-A9HO-01A","CDK4--PICSAR","12:CDK4:57752175:-:21:PICSAR:44999656:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","TMEM5--PTDSS1","12:TMEM5:63785072:+:8:PTDSS1:96273299:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","ATP2B1--RBM19","12:ATP2B1:89708596:-:12:RBM19:113844788:-:rev"]
["TCGA_SARC","TCGA-3B-A9HO-01A","COL6A1--RBM19","21:COL6A1:45994229:+:12:RBM19:113818186:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","NDUFAF6--RBM19","8:NDUFAF6:94958179:+:12:RBM19:113844788:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","TMTC3--RILPL1","12:TMTC3:88160851:+:12:RILPL1:123485805:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","LINC01278--SDC2","X:LINC01278:63560832:-:8:SDC2:96593480:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HO-01A","GUCD1--SGSM1","22:GUCD1:24555615:-:22:SGSM1:24806441:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HO-01A","POLR3B--SLC35E3","12:POLR3B:106410960:+:12:SLC35E3:68793288:+:rev"]
["TCGA_SARC","TCGA-3B-A9HO-01A","LIN7A--TMEM132D","12:LIN7A:80889251:-:12:TMEM132D:129084702:-:rev"]
["TCGA_SARC","TCGA-3B-A9HO-01A","SDC2--TMEM132D","8:SDC2:96494331:+:12:TMEM132D:129084702:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HR-01A","CTC1--AC092902.2","17:CTC1:8248004:-:3:AC092902.2:125827455:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HR-01A","NSD1--ARHGAP26","5:NSD1:177212195:+:5:ARHGAP26:142907704:+:rev"]
["TCGA_SARC","TCGA-3B-A9HR-01A","TP53--FAM196B","17:TP53:7687377:-:5:FAM196B:169884816:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HR-01A","FNDC3A--LPAR6","13:FNDC3A:49114731:+:13:LPAR6:48389812:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HR-01A","AC005618.1--TMEM232","5:AC005618.1:141326637:+:5:TMEM232:110424916:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CDK17--AC007298.1","12:CDK17:96334719:-:12:AC007298.1:96027398:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","SKA2--AC011990.1","17:SKA2:59131281:-:17:AC011990.1:70313388:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","INSR--AC025263.1","19:INSR:7163032:-:12:AC025263.1:69715587:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CHGA--AC025569.1","14:CHGA:92932851:+:12:AC025569.1:70507895:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","WSB2--AC073578.1","12:WSB2:118061036:-:12:AC073578.1:131474458:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LRP1--AC078923.1","12:LRP1:57156283:+:12:AC078923.1:75631314:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CDK17--AC078955.1","12:CDK17:96289167:-:12:AC078955.1:81094732:-:reg"]
["TCGA_SARC","TCGA-3B-A9HS-01A","MDM2--AC083805.2","12:MDM2:68813628:+:12:AC083805.2:57842259:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","RWDD1--AC090502.1","6:RWDD1:116571655:+:12:AC090502.1:74157884:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ARHGEF18--ACACB","19:ARHGEF18:7395247:+:12:ACACB:109197008:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","USP16--ACSS3","21:USP16:29024777:+:12:ACSS3:81151844:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LINC02328--AHSA1","14:LINC02328:85934861:+:14:AHSA1:77459616:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","VAV2--AL354754.1","9:VAV2:133776028:-:9:AL354754.1:117870227:-:reg"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LINC01479--BEST3","12:LINC01479:67929387:+:12:BEST3:69672965:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","GLIPR1--CDK17","12:GLIPR1:75482079:+:12:CDK17:96334865:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","AC020637.1--CPM","12:AC020637.1:58544179:+:12:CPM:68871956:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CTDSP2--CPM","12:CTDSP2:57846372:-:12:CPM:68871956:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LRP1--DAZAP2","12:LRP1:57175705:+:12:DAZAP2:51246061:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","PCSK5--DENND1A","9:PCSK5:76027037:+:9:DENND1A:123879021:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ACSS3--EEF1AKMT3","12:ACSS3:81109704:+:12:EEF1AKMT3:57773017:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","NAP1L1--ELK3","12:NAP1L1:76084567:-:12:ELK3:96223565:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TK1--ENDOV","17:TK1:78185055:-:17:ENDOV:80436133:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LRP1--FAM19A2","12:LRP1:57175705:+:12:FAM19A2:61710417:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","MTFR2--GFPT2","6:MTFR2:136249037:-:5:GFPT2:180338600:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ACACA--GLIPR1L2","17:ACACA:37330173:-:12:GLIPR1L2:75422904:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ACSS3--INSR","12:ACSS3:81152096:+:19:INSR:7143090:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ENPP1--INSR","6:ENPP1:131808275:+:19:INSR:7152927:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","HNRNPH1--INSR","5:HNRNPH1:179617989:-:19:INSR:7184637:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","IFT81--INSR","12:IFT81:110136860:+:19:INSR:7184637:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","MDM1--INSR","12:MDM1:68302620:-:19:INSR:7152927:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","PLXNC1--INSR","12:PLXNC1:94301057:+:19:INSR:7267896:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","SLC35E3--L3MBTL3","12:SLC35E3:68746779:+:6:L3MBTL3:130133452:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ITPK1--LAMA2","14:ITPK1:92962751:-:6:LAMA2:129320538:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LTA4H--LAMA2","12:LTA4H:96035361:-:6:LAMA2:129250112:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TAF13--LYPLA1","1:TAF13:109074987:-:8:LYPLA1:54055133:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TMEM167B--LYPLA1","1:TMEM167B:109093021:+:8:LYPLA1:54052756:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","SFXN1--LYZ","5:SFXN1:175492267:+:12:LYZ:69352220:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ACACB--MARCH9","12:ACACB:109237380:+:12:MARCH9:57756929:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","AC010196.1--METTL25","12:AC010196.1:86838666:-:12:METTL25:82477281:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ACACA--METTL25","17:ACACA:37358999:-:12:METTL25:82476644:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ANKLE2--MGAT1","12:ANKLE2:132747832:-:5:MGAT1:180793097:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CTDSP2--MGAT4C","12:CTDSP2:57846372:-:12:MGAT4C:86435265:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","INSR--MGAT4C","19:INSR:7293792:-:12:MGAT4C:86435265:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","GARS--NOD1","7:GARS:30631541:+:7:NOD1:30448381:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","LAMA2--NUP107","6:LAMA2:129320655:+:12:NUP107:68741813:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","BACH1--OSBPL8","21:BACH1:29329693:+:12:OSBPL8:76358811:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TMTC3--OSBPL8","12:TMTC3:88176319:+:12:OSBPL8:76358811:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TSPAN8--OSBPL8","12:TSPAN8:71157619:-:12:OSBPL8:76358811:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","METTL25--PHACTR2","12:METTL25:82456820:+:6:PHACTR2:143712016:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TRIM52-AS1--PHACTR2","5:TRIM52-AS1:181261384:+:6:PHACTR2:143748985:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","GFPT2--PPFIA2","5:GFPT2:180330700:-:12:PPFIA2:81353339:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","MGAT4C--PPFIA2","12:MGAT4C:86334065:-:12:PPFIA2:81263390:-:reg"]
["TCGA_SARC","TCGA-3B-A9HS-01A","BEST3--PTPRR","12:BEST3:69671428:-:12:PTPRR:70764778:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","AL158850.1--PTTG1","6:AL158850.1:139271858:+:5:PTTG1:160427715:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","AGAP2--RAB21","12:AGAP2:57729639:-:12:RAB21:71785531:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","SPDL1--SCGB3A2","5:SPDL1:169583889:+:5:SCGB3A2:147881446:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","PEX3--SLC35F1","6:PEX3:143474856:+:6:SLC35F1:118314028:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","KLHL8--SLC7A11-AS1","4:KLHL8:87220418:-:4:SLC7A11-AS1:138062808:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","UNK--SPOP","17:UNK:75784984:+:17:SPOP:49622876:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CTDSP2--TADA2A","12:CTDSP2:57846372:-:17:TADA2A:37458524:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ZNF557--TCHP","19:ZNF557:7070653:+:12:TCHP:109980905:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","ATP2C1--TMEM241","3:ATP2C1:130941699:+:18:TMEM241:23309744:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","NEDD1--TMTC2","12:NEDD1:96920125:+:12:TMTC2:82895818:+:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CTDSP2--TSPAN8","12:CTDSP2:57846372:-:12:TSPAN8:71144213:-:rev"]
["TCGA_SARC","TCGA-3B-A9HS-01A","CTDSP2--UTRN","12:CTDSP2:57846372:-:6:UTRN:144490071:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HS-01A","TRHDE--ZNF266","12:TRHDE:72575542:+:19:ZNF266:9420218:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HU-01A","RABEP1--AL049569.1","17:RABEP1:5282520:+:1:AL049569.1:17004643:+:fusion"]
["TCGA_SARC","TCGA-3B-A9HV-01A","C9orf3--AC078785.2","9:C9orf3:95060810:+:3:AC078785.2:113051705:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HV-01A","ETV1--CACNA2D1","7:ETV1:13977427:-:7:CACNA2D1:82066524:-:rev"]
["TCGA_SARC","TCGA-3B-A9HV-01A","ERCC6L2--CDC14B","9:ERCC6L2:96004701:+:9:CDC14B:96541892:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HV-01A","DOCK3--CSNK1A1","3:DOCK3:50778758:+:5:CSNK1A1:149525171:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HV-01A","C9orf3--LINC02044","9:C9orf3:95060810:+:3:LINC02044:113144335:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HV-01A","RNF165--PHLPP1","18:RNF165:46334335:+:18:PHLPP1:62941718:+:reg"]
["TCGA_SARC","TCGA-3B-A9HV-01A","ZNF462--ZBED2","9:ZNF462:106939107:+:3:ZBED2:111595066:-:fusion"]
["TCGA_SARC","TCGA-3B-A9HV-01A","C9orf3--ZNF462","9:C9orf3:95060810:+:9:ZNF462:106923354:+:reg"]
["TCGA_SARC","TCGA-3B-A9HX-01A","ZNF569--AC012313.3","19:ZNF569:37444907:-:19:AC012313.3:58358585:-:rev"]
["TCGA_SARC","TCGA-3B-A9HX-01A","ZNF17--ARHGAP35","19:ZNF17:57411406:+:19:ARHGAP35:46987989:+:rev"]
["TCGA_SARC","TCGA-3B-A9HX-01A","TGFB1--CCDC97","19:TGFB1:41332128:-:19:CCDC97:41316384:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HX-01A","TPM4--IGFL2","19:TPM4:16067738:+:19:IGFL2:46160415:+:reg"]
["TCGA_SARC","TCGA-3B-A9HX-01A","ZC3H4--KANK3","19:ZC3H4:47110895:-:19:KANK3:8325096:-:reg"]
["TCGA_SARC","TCGA-3B-A9HX-01A","LSM4--OVOL3","19:LSM4:18323018:-:19:OVOL3:36111369:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HX-01A","ZNF431--SIGLEC6","19:ZNF431:21143643:+:19:SIGLEC6:51531519:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HX-01A","AC008758.4--SIGLECL1","19:AC008758.4:12401068:-:19:SIGLECL1:51263883:+:strandcross"]
["TCGA_SARC","TCGA-3B-A9HX-01A","SIN3B--TBC1D17","19:SIN3B:16876578:+:19:TBC1D17:49880279:+:reg"]
["TCGA_SARC","TCGA-3B-A9HX-01A","ZNF569--ZNF497","19:ZNF569:37444907:-:19:ZNF497:58357649:-:rev"]
["TCGA_SARC","TCGA-3B-A9HX-01A","PIAS4--ZNF787","19:PIAS4:4033580:+:19:ZNF787:56103227:-:strandcross"]
["TCGA_SARC","TCGA-3B-A9HX-01A","HNRNPM--ZNF788","19:HNRNPM:8455574:+:19:ZNF788:12111246:+:reg"]
["TCGA_SARC","TCGA-3B-A9HY-01A","SORBS1--FAM135B","10:SORBS1:95346406:-:8:FAM135B:138243068:-:fusion"]
["TCGA_SARC","TCGA-3B-A9I1-01A","ZNF787--OVCH1-AS1","19:ZNF787:56103139:-:12:OVCH1-AS1:29461734:+:fusion"]
["TCGA_SARC","TCGA-3B-A9I3-01A","PPP1R18--TNXB","6:PPP1R18:30684408:-:6:TNXB:32053711:-:rev"]
["TCGA_SARC","TCGA-3R-A8YX-01A","ACSS3--AVIL","12:ACSS3:81078431:+:12:AVIL:57811127:-:strandcross"]
["TCGA_SARC","TCGA-3R-A8YX-01A","TMTC2--FRS2","12:TMTC2:82687669:+:12:FRS2:69530865:+:rev"]
["TCGA_SARC","TCGA-3R-A8YX-01A","TMTC2--LINC02373","12:TMTC2:82687669:+:12:LINC02373:69460605:+:rev"]
["TCGA_SARC","TCGA-3R-A8YX-01A","UVRAG--MS4A8","11:UVRAG:76007621:+:11:MS4A8:60703378:+:rev"]
["TCGA_SARC","TCGA-3R-A8YX-01A","E2F7--RAP1B","12:E2F7:77064543:-:12:RAP1B:68648699:+:strandcross"]
["TCGA_SARC","TCGA-3R-A8YX-01A","CNOT2--SSH3","12:CNOT2:70243480:+:11:SSH3:67307371:+:fusion"]
["TCGA_SARC","TCGA-3R-A8YX-01A","FRS2--TBC1D15","12:FRS2:69532056:+:12:TBC1D15:71872070:+:reg"]
["TCGA_SARC","TCGA-DX-A1KU-01A","ASPM--AC025419.1","1:ASPM:197121915:-:12:AC025419.1:65570048:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","PARVA--AC073172.1","11:PARVA:12377783:+:11:AC073172.1:15572400:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","PARVA--AC087380.1","11:PARVA:12377783:+:11:AC087380.1:5346910:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","RAP1B--AC090673.1","12:RAP1B:68611043:+:12:AC090673.1:65866954:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","UCHL5--C1orf112","1:UCHL5:193021097:-:1:C1orf112:169849500:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","CPM--CCT2","12:CPM:68885792:-:12:CCT2:69592976:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","RAP1B--DPT","12:RAP1B:68611043:+:1:DPT:168714346:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","MARCH6--GALNT18","5:MARCH6:10411537:+:11:GALNT18:11379264:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","RXRG--LINC02384","1:RXRG:165444845:-:12:LINC02384:68333664:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","SLC16A7--LINC02408","12:SLC16A7:59705018:+:12:LINC02408:67549123:+:reg"]
["TCGA_SARC","TCGA-DX-A1KU-01A","DLGAP1--METTL4","18:DLGAP1:3814059:-:18:METTL4:2567654:-:reg"]
["TCGA_SARC","TCGA-DX-A1KU-01A","YEATS4--NME7","12:YEATS4:69362907:+:1:NME7:169132817:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","GALNT18--PARVA","11:GALNT18:11621359:-:11:PARVA:12527849:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","ASPM--PIGC","1:ASPM:197146141:-:1:PIGC:172415374:-:reg"]
["TCGA_SARC","TCGA-DX-A1KU-01A","UEVLD--PRMT3","11:UEVLD:18588613:-:11:PRMT3:20452130:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","CTDSP2--RALB","12:CTDSP2:57846372:-:2:RALB:120278615:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","MDM1--RAP1B","12:MDM1:68313443:-:12:RAP1B:68650400:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","MDM1--RBMS2","12:MDM1:68332228:-:12:RBMS2:56581184:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","LRIG3--SLC16A7","12:LRIG3:58874055:-:12:SLC16A7:59761125:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","DENND1B--TSPAN31","1:DENND1B:197772868:-:12:TSPAN31:57746589:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KU-01A","EIF3M--UEVLD","11:EIF3M:32596047:+:11:UEVLD:18570377:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KU-01A","PRRG4--ZNF215","11:PRRG4:32840239:+:11:ZNF215:6932094:+:rev"]
["TCGA_SARC","TCGA-DX-A1KW-01A","FMNL3--AC020637.1","12:FMNL3:49665832:-:12:AC020637.1:58544124:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","HECTD4--AC020637.1","12:HECTD4:112381952:-:12:AC020637.1:58805941:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","ATXN2--AC069503.1","12:ATXN2:111509549:-:12:AC069503.1:122007934:-:rev"]
["TCGA_SARC","TCGA-DX-A1KW-01A","HECTD4--AMDHD1","12:HECTD4:112381952:-:12:AMDHD1:95966348:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","CHPT1--ATXN2","12:CHPT1:101698134:+:12:ATXN2:111509998:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","PWP1--CCDC63","12:PWP1:107697597:+:12:CCDC63:110893076:+:reg"]
["TCGA_SARC","TCGA-DX-A1KW-01A","KRR1--CDK17","12:KRR1:75501723:-:12:CDK17:96313454:-:rev"]
["TCGA_SARC","TCGA-DX-A1KW-01A","CAMKK2--DIP2B","12:CAMKK2:121296638:-:12:DIP2B:50625976:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","PTPN11--EPYC","12:PTPN11:112454680:+:12:EPYC:90978262:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","TMEM120B--GRIP1","12:TMEM120B:121773513:+:12:GRIP1:66379436:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","FMNL3--HECTD4","12:FMNL3:49707055:-:12:HECTD4:112283302:-:rev"]
["TCGA_SARC","TCGA-DX-A1KW-01A","ELK3--KRT78","12:ELK3:96223773:+:12:KRT78:52848121:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","AC020637.1--NAP1L1","12:AC020637.1:58544179:+:12:NAP1L1:76074239:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KW-01A","GNS--NUP107","12:GNS:64737004:-:12:NUP107:68709238:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KX-01A","ZNF98--ACTR5","19:ZNF98:22514364:-:20:ACTR5:38771559:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KX-01A","FAM180A--AHCYL2","7:FAM180A:135737099:-:7:AHCYL2:129379638:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KX-01A","BCL9L--DGKI","11:BCL9L:118925238:-:7:DGKI:137678652:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KX-01A","CLIC2--MAMLD1","X:CLIC2:155334371:-:X:MAMLD1:150469745:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KX-01A","AKT2--MAP3K7","19:AKT2:40237969:-:6:MAP3K7:90568623:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KX-01A","PTPRD--MTERF4","9:PTPRD:8633317:-:2:MTERF4:241075682:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KX-01A","PFKFB3--PALM2-AKAP2","10:PFKFB3:6226365:+:9:PALM2-AKAP2:109867491:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KX-01A","ARL15--PARP8","5:ARL15:54310432:-:5:PARP8:50750151:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KX-01A","AC021351.1--SNX18","15:AC021351.1:36215692:-:5:SNX18:54543179:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","RAF1--AC099754.1","3:RAF1:12663813:-:3:AC099754.1:26619506:-:rev"]
["TCGA_SARC","TCGA-DX-A1KY-01A","FOXP1--AC104090.1","3:FOXP1:71015549:-:4:AC104090.1:143738975:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ZNF558--CERS4","19:ZNF558:8831318:-:19:CERS4:8261688:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KY-01A","SUCO--CXorf21","1:SUCO:172557794:+:X:CXorf21:30576866:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","SP3--CYBRD1","2:SP3:173963761:-:2:CYBRD1:171553346:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KY-01A","PTPRS--ERLEC1","19:PTPRS:5340664:-:2:ERLEC1:53801713:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","PRDX6--FAM78B","1:PRDX6:173477492:+:1:FAM78B:166070763:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KY-01A","PPP4R2--FBXW7","3:PPP4R2:72998158:+:4:FBXW7:152412529:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","LIN7A--GRIP1","12:LIN7A:80889251:-:12:GRIP1:66465422:-:reg"]
["TCGA_SARC","TCGA-DX-A1KY-01A","OPA1--LINC00969","3:OPA1:193667280:+:3:LINC00969:195708134:+:reg"]
["TCGA_SARC","TCGA-DX-A1KY-01A","DMD--LIX1L","X:DMD:31260955:-:1:LIX1L:145947782:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ARMC9--PARD3B","2:ARMC9:231240041:+:2:PARD3B:205440370:+:rev"]
["TCGA_SARC","TCGA-DX-A1KY-01A","WDFY1--PARD3B","2:WDFY1:223945148:-:2:PARD3B:205499896:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KY-01A","NUF2--PHEX","1:NUF2:163340426:+:X:PHEX:22133523:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","RAB5A--PLCL2","3:RAB5A:19951061:+:3:PLCL2:17009674:+:rev"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ZDBF2--PSMD1","2:ZDBF2:206281909:+:2:PSMD1:231138736:+:reg"]
["TCGA_SARC","TCGA-DX-A1KY-01A","FAM220A--SCGB1A1","7:FAM220A:6348573:-:11:SCGB1A1:62422221:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ASH1L--SELL","1:ASH1L:155562153:-:1:SELL:169691802:-:rev"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ARHGAP24--STAC","4:ARHGAP24:85475559:+:3:STAC:36528696:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","MEF2A--SV2B","15:MEF2A:99675458:+:15:SV2B:91251819:+:rev"]
["TCGA_SARC","TCGA-DX-A1KY-01A","RBBP7--TTC24","X:RBBP7:16870038:-:1:TTC24:156582231:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","GALT--WDR72","9:GALT:34648456:+:15:WDR72:53597274:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KY-01A","IL11RA--WDR72","9:IL11RA:34652233:+:15:WDR72:53597274:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","METTL1--AC025263.1","12:METTL1:57769565:-:12:AC025263.1:69715587:-:rev"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TULP3--AC025575.2","12:TULP3:2890988:+:12:AC025575.2:71047679:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","WWP1--AC083805.1","8:WWP1:86442778:+:12:AC083805.1:57872088:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","ATP1B3--AC083805.3","3:ATP1B3:141922063:+:12:AC083805.3:57895652:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","EBF3--AC105202.1","10:EBF3:129957258:-:8:AC105202.1:142982501:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PTPRR--AC136188.1","12:PTPRR:70764665:-:12:AC136188.1:73919198:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","USP54--ADK","10:USP54:73625937:-:10:ADK:74589282:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TRIO--AL162254.1","5:TRIO:14270899:+:9:AL162254.1:122637106:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","CPSF6--AL445259.1","12:CPSF6:69239706:+:6:AL445259.1:123468816:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TULP3--CCSER2","12:TULP3:2934561:+:10:CCSER2:84417771:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PRPF40B--CDH4","12:PRPF40B:49568723:+:20:CDH4:61873728:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TBC1D15--CPM","12:TBC1D15:71839811:+:12:CPM:68859071:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PIK3C2G--CTDSP2","12:PIK3C2G:18282759:+:12:CTDSP2:57824319:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","FHL1--DCSTAMP","X:FHL1:136169980:+:8:DCSTAMP:104339806:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PPIL4--DCTN2","6:PPIL4:149521060:-:12:DCTN2:57535845:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","EPB41L5--FZR1","2:EPB41L5:120042110:+:19:FZR1:3522956:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","CELF2--GABRR1","10:CELF2:11018163:+:6:GABRR1:89185450:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PLEKHB2--GABRR1","2:PLEKHB2:131105398:+:6:GABRR1:89201265:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","FKBP4--GAPDH","12:FKBP4:2797871:+:12:GAPDH:6534810:+:reg"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","ADCY2--HSDL2","5:ADCY2:7773101:+:9:HSDL2:112416841:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PTCH1--IPPK","9:PTCH1:95506407:-:9:IPPK:92619565:-:reg"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TSPAN31--ITPR2","12:TSPAN31:57746720:+:12:ITPR2:26495260:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TM7SF3--KCNC2","12:TM7SF3:26990450:-:12:KCNC2:75051317:-:rev"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","CTDSP2--LGR5","12:CTDSP2:57823904:-:12:LGR5:71553073:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","WBP11--LGR5","12:WBP11:14801320:-:12:LGR5:71504614:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TM7SF3--LINC02149","12:TM7SF3:27014078:-:5:LINC02149:15243767:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TEAD4--MAP3K12","12:TEAD4:2960040:+:12:MAP3K12:53487145:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","VAMP1--MARCH11","12:VAMP1:6464890:-:5:MARCH11:16067793:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","FBXL7--MRPL51","5:FBXL7:15500713:+:12:MRPL51:6492467:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","DMXL1--NANS","5:DMXL1:119071656:+:9:NANS:98080816:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","SIRT1--NRG3-AS1","10:SIRT1:67887533:+:10:NRG3-AS1:82230365:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","FAM208B--OAZ1","10:FAM208B:5685175:+:19:OAZ1:2271782:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","MED21--PIP5K1C","12:MED21:27022621:+:19:PIP5K1C:3662001:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","AC025165.3--PTPRR","12:AC025165.3:57773128:+:12:PTPRR:70764778:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","EEF1AKMT3--PTPRR","12:EEF1AKMT3:57773073:+:12:PTPRR:70764778:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","KATNA1--RALYL","6:KATNA1:149648469:-:8:RALYL:84529299:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","GALNT12--ROR2","9:GALNT12:98808069:+:9:ROR2:91563329:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","PTPN3--SEMA5A","9:PTPN3:109498219:-:5:SEMA5A:9437852:-:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","AC024145.1--SMCO3","12:AC024145.1:26319004:+:12:SMCO3:14806696:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","MDM2--SPATS2","12:MDM2:68835984:+:12:SPATS2:49489465:+:rev"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","ANKH--STEAP3","5:ANKH:14871352:-:2:STEAP3:119245489:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","DCSTAMP--TSPAN31","8:DCSTAMP:104340440:+:12:TSPAN31:57745745:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","FHL1--TSPAN31","X:FHL1:136169980:+:12:TSPAN31:57746589:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","AC090502.1--TSPAN8","12:AC090502.1:74285025:-:12:TSPAN8:71129414:-:reg"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","TULP3--UGCG","12:TULP3:2934561:+:9:UGCG:111914605:+:fusion"]
["TCGA_SARC","TCGA-DX-A1KZ-01A","ANKH--ZFPM2","5:ANKH:14871352:-:8:ZFPM2:104714846:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","CNOT2--AC108721.1","12:CNOT2:70243480:+:12:AC108721.1:59403310:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","TIAM2--AL033504.1","6:TIAM2:155165409:+:6:AL033504.1:147733729:+:rev"]
["TCGA_SARC","TCGA-DX-A1L0-01A","HMGA2--ARFGAP2","12:HMGA2:65825381:+:11:ARFGAP2:47171800:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","ATP9B--ATRX","18:ATP9B:79096649:+:X:ATRX:77654200:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","EML1--BASP1","14:EML1:99851035:+:5:BASP1:17275208:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","HMBOX1--BNIP3L","8:HMBOX1:29018913:+:8:BNIP3L:26505307:+:rev"]
["TCGA_SARC","TCGA-DX-A1L0-01A","NHSL1--CDIP1","6:NHSL1:138545623:-:16:CDIP1:4514664:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","ANKH--DNAH5","5:ANKH:14871352:-:5:DNAH5:13735932:-:reg"]
["TCGA_SARC","TCGA-DX-A1L0-01A","KIAA1614--F11R","1:KIAA1614:180928573:+:1:F11R:161000348:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","RAB21--FRS2","12:RAB21:71774022:+:12:FRS2:69562180:+:rev"]
["TCGA_SARC","TCGA-DX-A1L0-01A","NFIC--IL4I1","19:NFIC:3382243:+:19:IL4I1:49891107:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","AC134511.1--LINC01481","12:AC134511.1:67069050:-:12:LINC01481:69904419:-:rev"]
["TCGA_SARC","TCGA-DX-A1L0-01A","ATP5J--LINC01692","21:ATP5J:25729631:-:21:LINC01692:25055434:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","ATP9B--LUC7L","18:ATP9B:79193263:+:16:LUC7L:208188:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","CPM--MON2","12:CPM:68932678:-:12:MON2:62532438:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","ZFC3H1--MON2","12:ZFC3H1:71656885:-:12:MON2:62578445:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L0-01A","MARS--MSRB3","12:MARS:57504299:+:12:MSRB3:65488004:+:reg"]
["TCGA_SARC","TCGA-DX-A1L0-01A","SLC16A7--NUP107","12:SLC16A7:59596236:+:12:NUP107:68733452:+:reg"]
["TCGA_SARC","TCGA-DX-A1L0-01A","SLC16A7--OVAAL","12:SLC16A7:59596236:+:1:OVAAL:180562204:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","DIAPH2--RAB3IP","X:DIAPH2:96685190:+:12:RAB3IP:69755384:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","TBC1D15--SLC16A7","12:TBC1D15:71873003:+:12:SLC16A7:59771219:+:rev"]
["TCGA_SARC","TCGA-DX-A1L0-01A","MON2--TBC1D15","12:MON2:62566450:+:12:TBC1D15:71872070:+:reg"]
["TCGA_SARC","TCGA-DX-A1L0-01A","SLFN5--TBC1D15","17:SLFN5:35243143:+:12:TBC1D15:71913826:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L0-01A","XPR1--TNR","1:XPR1:180632270:+:1:TNR:175528369:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L1-01A","KDM4C--AC017067.1","9:KDM4C:6893232:+:9:AC017067.1:22767175:+:reg"]
["TCGA_SARC","TCGA-DX-A1L1-01A","FGF2--FREM3","4:FGF2:122827352:+:4:FREM3:143627760:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L1-01A","CANX--TBC1D9B","5:CANX:179699102:+:5:TBC1D9B:179904812:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L2-01A","ATG7--AC090952.2","3:ATG7:11426926:+:3:AC090952.2:14640142:+:reg"]
["TCGA_SARC","TCGA-DX-A1L2-01A","LINC-PINT--C1orf61","7:LINC-PINT:131052425:-:1:C1orf61:156404601:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","LINC-PINT--CCT3","7:LINC-PINT:131052425:-:1:CCT3:156335888:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","ARHGEF11--CD48","1:ARHGEF11:157044299:-:1:CD48:160685189:-:rev"]
["TCGA_SARC","TCGA-DX-A1L2-01A","POU2F1--COPA","1:POU2F1:167220958:+:1:COPA:160291496:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L2-01A","INPP4A--EEF1E1","2:INPP4A:98577143:+:6:EEF1E1:8080030:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","LINC-PINT--FMO3","7:LINC-PINT:131052425:-:1:FMO3:171103785:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","GATAD2B--GRM8","1:GATAD2B:153922733:-:7:GRM8:126446372:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","LPCAT1--MED13","5:LPCAT1:1501461:-:17:MED13:61947017:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","TBX19--PCP4L1","1:TBX19:168308877:+:1:PCP4L1:161283668:+:rev"]
["TCGA_SARC","TCGA-DX-A1L2-01A","USP15--STAT6","12:USP15:62260503:+:12:STAT6:57108299:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L2-01A","UCK2--TBX19","1:UCK2:165827932:+:1:TBX19:168308742:+:reg"]
["TCGA_SARC","TCGA-DX-A1L2-01A","SLC38A10--TMEM207","17:SLC38A10:81270918:-:3:TMEM207:190429731:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L2-01A","TGFBR2--XPC","3:TGFBR2:30606977:+:3:XPC:14173062:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L2-01A","MTOR--ZMYM4-AS1","1:MTOR:11157152:-:1:ZMYM4-AS1:35359168:-:rev"]
["TCGA_SARC","TCGA-DX-A1L3-01A","FMO3--AC012464.1","1:FMO3:171108221:+:12:AC012464.1:93895365:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","CDH18--AC020637.1","5:CDH18:19981060:-:12:AC020637.1:58801260:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","SUCO--AC020637.1","1:SUCO:172533497:+:12:AC020637.1:58812414:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","SUCO--AC025263.2","1:SUCO:172533497:+:12:AC025263.2:69825323:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","POU2F1--AC078820.1","1:POU2F1:167220958:+:12:AC078820.1:75694975:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","PLEKHA5--AC084033.3","12:PLEKHA5:19132450:+:12:AC084033.3:57931737:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L3-01A","SYT1--AC136188.1","12:SYT1:79299551:+:12:AC136188.1:73906940:+:rev"]
["TCGA_SARC","TCGA-DX-A1L3-01A","FRS2--ATXN1","12:FRS2:69470530:+:6:ATXN1:16486109:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","KIFAP3--C1orf112","1:KIFAP3:170016462:-:1:C1orf112:169836927:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L3-01A","FBXL7--CCT5","5:FBXL7:15616072:+:5:CCT5:10254145:+:rev"]
["TCGA_SARC","TCGA-DX-A1L3-01A","CNOT2--CRADD","12:CNOT2:70243480:+:12:CRADD:93849970:+:reg"]
["TCGA_SARC","TCGA-DX-A1L3-01A","IQCH--CTNND2","15:IQCH:67261394:+:5:CTNND2:11199661:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","ATXN1--DNM3","6:ATXN1:16485972:-:1:DNM3:172379018:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","JARID2--DNM3","6:JARID2:15246584:+:1:DNM3:171921748:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","RAB3IP--KCNC2","12:RAB3IP:69756663:+:12:KCNC2:75051317:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L3-01A","NTN4--KIFAP3","12:NTN4:95786939:-:1:KIFAP3:169961235:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","NUP155--LINC02410","5:NUP155:37325901:-:12:LINC02410:95823089:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","MAP2K5--MYRFL","15:MAP2K5:67600749:+:12:MYRFL:69879028:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","SLC35E3--MYRFL","12:SLC35E3:68752190:+:12:MYRFL:69952113:+:reg"]
["TCGA_SARC","TCGA-DX-A1L3-01A","SUCO--MYRFL","1:SUCO:172533497:+:12:MYRFL:69855280:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","FAM78B--RAB3IP","1:FAM78B:166165986:-:12:RAB3IP:69812778:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","ZDHHC17--RAB3IP","12:ZDHHC17:76764329:+:12:RAB3IP:69755384:+:rev"]
["TCGA_SARC","TCGA-DX-A1L3-01A","ATXN1--SLC24A1","6:ATXN1:16485972:-:15:SLC24A1:65618880:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L3-01A","TRIO--TERT","5:TRIO:14420021:+:5:TERT:1282624:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","MTHFD1L--AC024941.2","6:MTHFD1L:150877826:+:12:AC024941.2:88597948:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","CHD2--AC091534.1","15:CHD2:93012444:+:12:AC091534.1:75295043:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","FRS2--AC091534.1","12:FRS2:69532056:+:12:AC091534.1:75250493:+:reg"]
["TCGA_SARC","TCGA-DX-A1L4-01A","NAV3--ANO4","12:NAV3:77968702:+:12:ANO4:100852368:+:reg"]
["TCGA_SARC","TCGA-DX-A1L4-01A","LINC01490--BEST3","12:LINC01490:80766820:+:12:BEST3:69678893:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","FBLN1--CDK19","22:FBLN1:45518787:+:6:CDK19:110746201:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","TBK1--CDK19","12:TBK1:64485513:+:6:CDK19:110614666:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","CDK19--CPM","6:CDK19:110746126:-:12:CPM:68871956:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","ATP2B1--DCN","12:ATP2B1:89634778:-:12:DCN:91178585:-:rev"]
["TCGA_SARC","TCGA-DX-A1L4-01A","STAM--EPYC","10:STAM:17644379:+:12:EPYC:90978262:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","OSBPL8--FAM186A","12:OSBPL8:76559397:-:12:FAM186A:50334103:-:reg"]
["TCGA_SARC","TCGA-DX-A1L4-01A","RSU1--FANCI","10:RSU1:16816973:-:15:FANCI:89273377:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","SELENOO--GRIP1","22:SELENOO:50201590:+:12:GRIP1:66406428:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","TMTC2--HERC1","12:TMTC2:82687669:+:15:HERC1:63664594:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","MTHFD1L--IFT81","6:MTHFD1L:150877826:+:12:IFT81:110162919:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","FAM186A--IRAK4","12:FAM186A:50330573:-:12:IRAK4:43771220:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","MON2--LINC01619","12:MON2:62556192:+:12:LINC01619:91993529:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","ZDHHC17--MALRD1","12:ZDHHC17:76764329:+:10:MALRD1:19257684:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","ZDHHC17--METTL25","12:ZDHHC17:76822531:+:12:METTL25:82476644:+:reg"]
["TCGA_SARC","TCGA-DX-A1L4-01A","GRIP1--MYO1H","12:GRIP1:66353417:-:12:MYO1H:109455468:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","AC134511.1--NR1H4","12:AC134511.1:67069050:-:12:NR1H4:100540672:+:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","TUBA1C--NT5DC3","12:TUBA1C:49265184:+:12:NT5DC3:103771329:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","ANO4--NTS","12:ANO4:100987670:+:12:NTS:85878345:+:rev"]
["TCGA_SARC","TCGA-DX-A1L4-01A","GAS2L3--OS9","12:GAS2L3:100601753:+:12:OS9:57715760:+:rev"]
["TCGA_SARC","TCGA-DX-A1L4-01A","TMEM117--PRIM1","12:TMEM117:43844928:+:12:PRIM1:56751195:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","R3HDM2--SASH1","12:R3HDM2:57395749:-:6:SASH1:148546015:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","KITLG--ST8SIA6","12:KITLG:88580264:-:10:ST8SIA6:17323157:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","FRS2--STAB2","12:FRS2:69470530:+:12:STAB2:103648690:+:reg"]
["TCGA_SARC","TCGA-DX-A1L4-01A","SASH1--STAB2","6:SASH1:148546146:+:12:STAB2:103759133:+:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","FRS2--THEMIS","12:FRS2:69470530:+:6:THEMIS:127719823:-:fusion"]
["TCGA_SARC","TCGA-DX-A1L4-01A","TUBA1C--TMEM116","12:TUBA1C:49265184:+:12:TMEM116:111934030:-:strandcross"]
["TCGA_SARC","TCGA-DX-A1L4-01A","REV3L--TMEM117","6:REV3L:111322569:-:12:TMEM117:43844624:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","NAV3--AC008035.1","12:NAV3:77831704:+:12:AC008035.1:46652390:+:rev"]
["TCGA_SARC","TCGA-DX-A23R-01A","MDM2--AC023509.3","12:MDM2:68816945:+:12:AC023509.3:53601021:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","PAWR--AC090673.2","12:PAWR:79689729:-:12:AC090673.2:65935129:-:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","MDM2--ATF7","12:MDM2:68816945:+:12:ATF7:53601021:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","CHD4--CPM","12:CHD4:6591466:-:12:CPM:68871956:-:rev"]
["TCGA_SARC","TCGA-DX-A23R-01A","CTDSP2--CPM","12:CTDSP2:57846372:-:12:CPM:68859071:-:rev"]
["TCGA_SARC","TCGA-DX-A23R-01A","TM9SF2--CPM","13:TM9SF2:99501777:+:12:CPM:68859071:-:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","DERA--DNAJA2","12:DERA:15911414:+:16:DNAJA2:46971955:-:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","CACNA1C--EEA1","12:CACNA1C:2120430:+:12:EEA1:92819511:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","ARHGEF7--EXOC4","13:ARHGEF7:111115691:+:7:EXOC4:133895599:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","CRADD--GRIP1","12:CRADD:93679072:+:12:GRIP1:66465422:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","AC025165.3--LINC02444","12:AC025165.3:57773128:+:12:LINC02444:73163194:+:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","CTDSP2--LRP1","12:CTDSP2:57846372:-:12:LRP1:57165805:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","AC007611.1--LTA4H","16:AC007611.1:48623603:+:12:LTA4H:96006409:-:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","TSPAN3--MDM2","15:TSPAN3:77052385:-:12:MDM2:68813554:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","DCTN2--NAV3","12:DCTN2:57546028:-:12:NAV3:78128706:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","N4BP1--NAV3","16:N4BP1:48560754:-:12:NAV3:78116772:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","ZNF385A--NAV3","12:ZNF385A:54384428:-:12:NAV3:78159203:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","CTDSP2--NFE2","12:CTDSP2:57846372:-:12:NFE2:54295304:-:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","MKRN1--NLGN1","7:MKRN1:140471883:-:3:NLGN1:174275315:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","EPHB3--PAX2","3:EPHB3:184573176:+:10:PAX2:100806430:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","ADAMTS7--PEAK1","15:ADAMTS7:78788231:-:15:PEAK1:77115319:-:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","SYT1--PHKB","12:SYT1:78865109:+:16:PHKB:47689041:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","FRS2--PLEKHG7","12:FRS2:69470530:+:12:PLEKHG7:92740853:+:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","PHKB--SCN8A","16:PHKB:47696488:+:12:SCN8A:51684174:+:fusion"]
["TCGA_SARC","TCGA-DX-A23R-01A","CACNA1C--SLC6A15","12:CACNA1C:2120430:+:12:SLC6A15:84870670:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","NAV3--SLC6A15","12:NAV3:78181045:+:12:SLC6A15:84885561:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23R-01A","CDC73--SWT1","1:CDC73:193236356:+:1:SWT1:185184243:+:rev"]
["TCGA_SARC","TCGA-DX-A23R-01A","PPHLN1--TBC1D15","12:PPHLN1:42398994:+:12:TBC1D15:71872070:+:reg"]
["TCGA_SARC","TCGA-DX-A23R-01A","CACNA1C--TSPAN8","12:CACNA1C:2120430:+:12:TSPAN8:71282819:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23T-01A","UST--BIRC3","6:UST:148747677:+:11:BIRC3:102336760:+:fusion"]
["TCGA_SARC","TCGA-DX-A23T-01A","CPSF6--CPM","12:CPSF6:69239706:+:12:CPM:68859071:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23T-01A","GBF1--CTDSP2","10:GBF1:102245781:+:12:CTDSP2:57824319:-:fusion"]
["TCGA_SARC","TCGA-DX-A23T-01A","UTRN--HEBP2","6:UTRN:144291907:+:6:HEBP2:138405145:+:rev"]
["TCGA_SARC","TCGA-DX-A23T-01A","YEATS4--LINC02442","12:YEATS4:69362907:+:12:LINC02442:67571305:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23T-01A","LINC01479--OS9","12:LINC01479:67929387:+:12:OS9:57715760:+:rev"]
["TCGA_SARC","TCGA-DX-A23T-01A","GLI3--PGC","7:GLI3:42148226:-:6:PGC:41737004:-:fusion"]
["TCGA_SARC","TCGA-DX-A23T-01A","RASSF3--PGR-AS1","12:RASSF3:64684894:+:11:PGR-AS1:101209343:+:fusion"]
["TCGA_SARC","TCGA-DX-A23T-01A","GNS--RASSF3","12:GNS:64739381:-:12:RASSF3:64684787:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23T-01A","YAP1--RNF130","11:YAP1:102111169:+:5:RNF130:180040647:-:fusion"]
["TCGA_SARC","TCGA-DX-A23T-01A","TBPL1--TDRG1","6:TBPL1:133982880:+:6:TDRG1:40379282:+:rev"]
["TCGA_SARC","TCGA-DX-A23T-01A","GBF1--TRPC6","10:GBF1:102245781:+:11:TRPC6:101504798:-:fusion"]
["TCGA_SARC","TCGA-DX-A23U-01A","OMA1--AL138900.3","1:OMA1:58533953:-:1:AL138900.3:157282578:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23U-01A","FGGY--ATP2B4","1:FGGY:59457076:+:1:ATP2B4:203707862:+:reg"]
["TCGA_SARC","TCGA-DX-A23U-01A","SDK1--BRAT1","7:SDK1:3821583:+:7:BRAT1:2543962:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23U-01A","SNX27--CPT2","1:SNX27:151612512:+:1:CPT2:53200719:+:rev"]
["TCGA_SARC","TCGA-DX-A23U-01A","LINC01135--DAB1","1:LINC01135:58785305:+:1:DAB1:57145429:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23U-01A","DAB1--OMA1","1:DAB1:57136543:-:1:OMA1:58481174:-:rev"]
["TCGA_SARC","TCGA-DX-A23U-01A","PRPF3--OTUD7B","1:PRPF3:150346491:+:1:OTUD7B:149971251:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23U-01A","RAB3B--PKN2","1:RAB3B:51976890:-:1:PKN2:88740988:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23U-01A","TUFT1--PKN2","1:TUFT1:151540426:+:1:PKN2:88740988:+:rev"]
["TCGA_SARC","TCGA-DX-A23U-01A","TNRC18--SELENBP1","7:TNRC18:5421060:-:1:SELENBP1:151366904:-:fusion"]
["TCGA_SARC","TCGA-DX-A23U-01A","PEA15--SNX27","1:PEA15:160205522:+:1:SNX27:151658235:+:rev"]
["TCGA_SARC","TCGA-DX-A23U-01A","DAB1--TMEM59","1:DAB1:57290964:-:1:TMEM59:54041805:-:reg"]
["TCGA_SARC","TCGA-DX-A23U-01A","LINC01771--TUFT1","1:LINC01771:53331251:+:1:TUFT1:151574270:+:reg"]
["TCGA_SARC","TCGA-DX-A23U-01A","TUBGCP5--ZCCHC11","15:TUBGCP5:23003065:-:1:ZCCHC11:52436978:-:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","DAB1--CDK4","1:DAB1:58506060:-:12:CDK4:57748617:-:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","OMA1--CDK4","1:OMA1:58506060:-:12:CDK4:57748617:-:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","TCTN1--CPM","12:TCTN1:110640517:+:12:CPM:68842329:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23V-01A","GNPTAB--FGD6","12:GNPTAB:101749101:-:12:FGD6:95172744:-:reg"]
["TCGA_SARC","TCGA-DX-A23V-01A","TCTN1--FGGY","12:TCTN1:110614402:+:1:FGGY:59321536:+:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","ADGRL2--LINC01481","1:ADGRL2:81837057:+:12:LINC01481:69904419:-:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","AC025165.3--LTA4H","12:AC025165.3:57773128:+:12:LTA4H:96024547:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23V-01A","DRAM1--NTN4","12:DRAM1:101877920:+:12:NTN4:95670146:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23V-01A","YEATS4--PARPBP","12:YEATS4:69362907:+:12:PARPBP:102195951:+:reg"]
["TCGA_SARC","TCGA-DX-A23V-01A","FGD6--TBC1D30","12:FGD6:95134739:-:12:TBC1D30:64838683:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23V-01A","SYDE2--TCTN1","1:SYDE2:85200252:-:12:TCTN1:110619836:+:fusion"]
["TCGA_SARC","TCGA-DX-A23V-01A","YEATS4--USP15","12:YEATS4:69362907:+:12:USP15:62325872:+:rev"]
["TCGA_SARC","TCGA-DX-A23V-01A","TSPAN31--WIF1","12:TSPAN31:57747131:+:12:WIF1:65077854:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23Y-01A","MDM2--C12orf50","12:MDM2:68813628:+:12:C12orf50:88030237:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23Y-01A","POLH--C12orf71","6:POLH:43605319:+:12:C12orf71:27081467:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","PPIL4--CLEC4A","6:PPIL4:149525143:-:12:CLEC4A:8135585:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","PTK7--CNOT2","6:PTK7:43076567:+:12:CNOT2:70353829:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","CCT2--DEPDC4","12:CCT2:69593613:+:12:DEPDC4:100252536:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23Y-01A","ETV6--EPB41L2","12:ETV6:11650160:+:6:EPB41L2:130901180:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","TSFM--FRS2","12:TSFM:57793073:+:12:FRS2:69486202:+:reg"]
["TCGA_SARC","TCGA-DX-A23Y-01A","LONP2--IKBIP","16:LONP2:48296165:+:12:IKBIP:98614340:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","PPP1CC--KCNC2","12:PPP1CC:110742653:-:12:KCNC2:75041206:-:reg"]
["TCGA_SARC","TCGA-DX-A23Y-01A","SPPL3--KRR1","12:SPPL3:120903845:-:12:KRR1:75508446:-:reg"]
["TCGA_SARC","TCGA-DX-A23Y-01A","ACSS3--KRT77","12:ACSS3:81078428:+:12:KRT77:52697896:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23Y-01A","TFDP2--LONP2","3:TFDP2:142149183:-:16:LONP2:48262778:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","NT5E--MDM2","6:NT5E:85450478:+:12:MDM2:68813554:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","PPFIA2--MRPL14","12:PPFIA2:81676791:-:6:MRPL14:44116629:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","TRMT61A--NDUFA12","14:TRMT61A:103532848:+:12:NDUFA12:94994257:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","GTF2F2--PCDH9-AS1","13:GTF2F2:45136806:+:13:PCDH9-AS1:66323174:+:reg"]
["TCGA_SARC","TCGA-DX-A23Y-01A","NHSL1--PRDM1","6:NHSL1:138496219:-:6:PRDM1:106088201:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23Y-01A","ZNF354C--PRSS3","5:ZNF354C:179062095:+:9:PRSS3:33796643:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Y-01A","TTK--TMEM63B","6:TTK:80011548:+:6:TMEM63B:44151846:+:rev"]
["TCGA_SARC","TCGA-DX-A23Y-01A","CPSF6--TSPAN31","12:CPSF6:69239706:+:12:TSPAN31:57745745:+:rev"]
["TCGA_SARC","TCGA-DX-A23Z-01A","CTDSP2--AC020611.2","12:CTDSP2:57846372:-:12:AC020611.2:64042940:-:rev"]
["TCGA_SARC","TCGA-DX-A23Z-01A","SASH1--AC083805.1","6:SASH1:148544818:+:12:AC083805.1:57886696:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","SWI5--ATG16L2","9:SWI5:128286033:+:11:ATG16L2:72842617:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","ARFGEF1--CCDC94","8:ARFGEF1:67211483:-:19:CCDC94:4261994:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","CIZ1--DBH-AS1","9:CIZ1:128185547:-:9:DBH-AS1:133656537:-:rev"]
["TCGA_SARC","TCGA-DX-A23Z-01A","CTDSP2--FRS2","12:CTDSP2:57846372:-:12:FRS2:69530865:+:strandcross"]
["TCGA_SARC","TCGA-DX-A23Z-01A","SASH1--MSANTD2","6:SASH1:148544818:+:11:MSANTD2:124779139:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","PAAF1--NCR3","11:PAAF1:73877068:+:6:NCR3:31589899:-:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","RSPH3--NOTCH4","6:RSPH3:158999435:-:6:NOTCH4:32203882:-:reg"]
["TCGA_SARC","TCGA-DX-A23Z-01A","TMBIM4--PBX3","12:TMBIM4:66169855:-:9:PBX3:125915686:+:fusion"]
["TCGA_SARC","TCGA-DX-A23Z-01A","SRGAP1--PTPRR","12:SRGAP1:63844883:+:12:PTPRR:70764778:-:strandcross"]
["TCGA_SARC","TCGA-DX-A23Z-01A","SC5D--SPA17","11:SC5D:121292816:+:11:SPA17:124675238:+:reg"]
["TCGA_SARC","TCGA-DX-A23Z-01A","HECTD4--YAP1","12:HECTD4:112381952:-:11:YAP1:102205893:+:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","FAR2--AC022081.1","12:FAR2:29149407:+:12:AC022081.1:28822273:-:strandcross"]
["TCGA_SARC","TCGA-DX-A240-01A","HACE1--AL592043.1","6:HACE1:104833042:-:X:AL592043.1:34206817:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","SLC2A13--ARHGDIB","12:SLC2A13:40028301:-:12:ARHGDIB:14947949:-:reg"]
["TCGA_SARC","TCGA-DX-A240-01A","RP2--CCND2-AS1","X:RP2:46860102:+:12:CCND2-AS1:4249193:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","RP2--CCND2-AS2","X:RP2:46877590:+:12:CCND2-AS2:4253185:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","OS9--CD48","12:OS9:57696373:+:1:CD48:160681468:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","NHS--F11R","X:NHS:17376322:+:1:F11R:161001353:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","AC008014.1--IFNG","12:AC008014.1:46387972:+:12:IFNG:68155487:-:strandcross"]
["TCGA_SARC","TCGA-DX-A240-01A","IL1RAPL1--KERA","X:IL1RAPL1:29668504:+:12:KERA:91051518:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","PIGC--KERA","1:PIGC:172443988:-:12:KERA:91056289:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","RBBP7--NDUFAF4","X:RBBP7:16869076:-:6:NDUFAF4:96896847:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","KIRREL--PLBD1-AS1","1:KIRREL:157993728:+:12:PLBD1-AS1:14612879:+:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","CPNE8--PRMT8","12:CPNE8:38873004:-:12:PRMT8:3540606:+:strandcross"]
["TCGA_SARC","TCGA-DX-A240-01A","MDM2--SLAMF9","12:MDM2:68836749:+:1:SLAMF9:159953653:-:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","ADIPOR2--SLC2A13","12:ADIPOR2:1754514:+:12:SLC2A13:40048210:-:strandcross"]
["TCGA_SARC","TCGA-DX-A240-01A","NIT1--TIGAR","1:NIT1:161120232:+:12:TIGAR:4349819:+:fusion"]
["TCGA_SARC","TCGA-DX-A240-01A","DCAF6--UFC1","1:DCAF6:167951861:+:1:UFC1:161153926:+:rev"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","TRAF3--AC084033.3","14:TRAF3:102777675:+:12:AC084033.3:57935553:-:fusion"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","AHRR--AVIL","5:AHRR:376716:+:12:AVIL:57799920:-:fusion"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","PAN2--LYZ","12:PAN2:56324294:-:12:LYZ:69350108:+:strandcross"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","MOK--MUCL1","14:MOK:102304962:-:12:MUCL1:54856770:+:fusion"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","AC023055.1--NT5DC3","12:AC023055.1:55794359:-:12:NT5DC3:103806929:-:rev"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","LINC01481--NUP107","12:LINC01481:70242797:-:12:NUP107:68688962:+:strandcross"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","HCFC2--STAT2","12:HCFC2:104068107:+:12:STAT2:56356578:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","YY1--TESPA1","14:YY1:100239923:+:12:TESPA1:54950390:-:fusion"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","FAM19A2--TMBIM4","12:FAM19A2:61753622:-:12:TMBIM4:66153448:-:rev"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","GNPTAB--TRHDE","12:GNPTAB:101830559:-:12:TRHDE:72286681:+:strandcross"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","CHPT1--TXNRD1","12:CHPT1:101698134:+:12:TXNRD1:104313245:+:reg"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","GLT8D2--YY1","12:GLT8D2:104003135:-:14:YY1:100276490:+:fusion"]
["TCGA_SARC","TCGA-DX-A2J0-01A","SUCO--C12orf42","1:SUCO:172533497:+:12:C12orf42:103302559:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J0-01A","C21orf91--COLGALT2","21:C21orf91:17818192:-:1:COLGALT2:183945564:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J0-01A","CNOT2--DNM3OS","12:CNOT2:70311017:+:1:DNM3OS:172144437:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J0-01A","TBX15--FMN2","1:TBX15:118987591:-:1:FMN2:240257945:+:strandcross"]
["TCGA_SARC","TCGA-DX-A2J0-01A","ACSS3--LINC01481","12:ACSS3:81143247:+:12:LINC01481:69904419:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J0-01A","CPSF6--LINC01481","12:CPSF6:69262562:+:12:LINC01481:70242893:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J0-01A","CAST--LINC02223","5:CAST:96675601:+:5:LINC02223:17955694:+:rev"]
["TCGA_SARC","TCGA-DX-A2J0-01A","CPSF6--TMBIM4","12:CPSF6:69262562:+:12:TMBIM4:66153448:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J0-01A","MPZL1--TNFSF4","1:MPZL1:167765749:+:1:TNFSF4:173188569:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J1-01A","ACVRL1--AC007406.1","12:ACVRL1:51907695:+:12:AC007406.1:193961:+:rev"]
["TCGA_SARC","TCGA-DX-A2J1-01A","NAV3--AC008127.1","12:NAV3:77572266:+:12:AC008127.1:45103057:+:rev"]
["TCGA_SARC","TCGA-DX-A2J1-01A","CPT1A--AC121761.1","11:CPT1A:68793315:-:12:AC121761.1:75484890:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J1-01A","SPATS2--ATP5G2","12:SPATS2:49371290:+:12:ATP5G2:53665428:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J1-01A","NUP107--LINC02389","12:NUP107:68713808:+:12:LINC02389:64947316:+:rev"]
["TCGA_SARC","TCGA-DX-A2J1-01A","CDK19--LYZ","6:CDK19:110667434:-:12:LYZ:69350108:+:fusion"]
["TCGA_SARC","TCGA-DX-A2J1-01A","ZDHHC17--MMP27","12:ZDHHC17:76764329:+:11:MMP27:102703118:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J1-01A","MDM2--NAV3","12:MDM2:68813628:+:12:NAV3:77571859:+:reg"]
["TCGA_SARC","TCGA-DX-A2J1-01A","SYNE1--NAV3","6:SYNE1:152376381:-:12:NAV3:77571859:+:fusion"]
["TCGA_SARC","TCGA-DX-A2J1-01A","HMGA2--SARNP","12:HMGA2:65838569:+:12:SARNP:55752840:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J4-01A","AC025165.3--AC024909.1","12:AC025165.3:57773128:+:12:AC024909.1:89123075:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J4-01A","AXL--AC073530.1","19:AXL:41238154:+:12:AC073530.1:67091628:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J4-01A","FRS2--C12orf66","12:FRS2:69470530:+:12:C12orf66:64215963:-:strandcross"]
["TCGA_SARC","TCGA-DX-A2J4-01A","ZNF562--DTX3","19:ZNF562:9675015:-:12:DTX3:57605571:+:fusion"]
["TCGA_SARC","TCGA-DX-A2J4-01A","ZNF441--FAM19A2","19:ZNF441:11767196:+:12:FAM19A2:61755024:-:fusion"]
["TCGA_SARC","TCGA-DX-A2J4-01A","ZNF44--MYRFL","19:ZNF44:12274973:-:12:MYRFL:69952799:+:fusion"]
["TCGA_SARC","TCGA-DX-A2J4-01A","MDM2--TSPAN31","12:MDM2:68809292:+:12:TSPAN31:57746589:+:rev"]
["TCGA_SARC","TCGA-DX-A3LS-01A","LTA4H--AC024909.1","12:LTA4H:96009094:-:12:AC024909.1:89123075:-:reg"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MAN1A1--AC024909.1","6:MAN1A1:119248260:-:12:AC024909.1:89123075:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","PITPNM2--ARHGEF25","12:PITPNM2:123149776:-:12:ARHGEF25:57612930:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MLXIP--ASH2L","12:MLXIP:122079266:+:8:ASH2L:38138816:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","TSPAN8--ASH2L","12:TSPAN8:71282716:-:8:ASH2L:38138816:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","AC068768.1--ATP5E","12:AC068768.1:123259043:-:20:ATP5E:59030429:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","EXOC4--C12orf65","7:EXOC4:133817544:+:12:C12orf65:123253647:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","TRHDE--C12orf75","12:TRHDE:72286954:+:12:C12orf75:105395632:+:reg"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ASH2L--CASS4","8:ASH2L:38133546:+:20:CASS4:56445900:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","HDAC11--CDH18","3:HDAC11:13483564:+:5:CDH18:19981178:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","KCCAT198--CPM","12:KCCAT198:105326904:-:12:CPM:68871956:-:reg"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MDM2--CPM","12:MDM2:68809292:+:12:CPM:68885889:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CEP85L--CSMD1","6:CEP85L:118565529:-:8:CSMD1:3219442:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CHCHD3--CSMD1","7:CHCHD3:132885662:-:8:CSMD1:3348161:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","C12orf65--EIF4EBP1","12:C12orf65:123233531:+:8:EIF4EBP1:38057081:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MPHOSPH9--ELK3","12:MPHOSPH9:123210056:-:12:ELK3:96246940:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ARMC12--ERGIC3","6:ARMC12:35738518:+:20:ERGIC3:35555044:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MAN1A1--FMNL3","6:MAN1A1:119290683:-:12:FMNL3:49662049:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","HVCN1--GOLGA3","12:HVCN1:110689726:-:12:GOLGA3:132808549:-:rev"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ZNF71--HSPB8","19:ZNF71:56601591:+:12:HSPB8:119187025:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CEP85L--JAK2","6:CEP85L:118565529:-:9:JAK2:4985940:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CCT2--KCNC2","12:CCT2:69586344:+:12:KCNC2:75043813:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","KDM2B--LRRIQ1","12:KDM2B:121574547:-:12:LRRIQ1:85244789:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","NCOA6--LSM1","20:NCOA6:34768464:-:8:LSM1:38172033:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","APPL2--MAN1A1","12:APPL2:105207061:-:6:MAN1A1:119302103:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CCDC92--MAN1A1","12:CCDC92:123942744:-:6:MAN1A1:119302103:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","UHRF1BP1--MDC1-AS1","6:UHRF1BP1:34792294:+:6:MDC1-AS1:30712312:+:rev"]
["TCGA_SARC","TCGA-DX-A3LS-01A","PHF20--MROH8","20:PHF20:35927879:+:20:MROH8:37172057:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ZNF71--MYRFL","19:ZNF71:56601591:+:12:MYRFL:69855280:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ACTN4--NIPAL2","19:ACTN4:38724565:+:8:NIPAL2:98193090:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","NCOR2--NUP37","12:NCOR2:124419957:-:12:NUP37:102118583:-:reg"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CAMKK2--PMCH","12:CAMKK2:121296638:-:12:PMCH:102197171:-:reg"]
["TCGA_SARC","TCGA-DX-A3LS-01A","GLIPR1L1--RAB3IP","12:GLIPR1L1:75334902:+:12:RAB3IP:69755384:+:rev"]
["TCGA_SARC","TCGA-DX-A3LS-01A","SEC16A--RXRA","9:SEC16A:136459134:-:9:RXRA:134401632:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ELK3--SBNO1","12:ELK3:96194705:+:12:SBNO1:123350441:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","FRS2--SBNO1","12:FRS2:69470530:+:12:SBNO1:123350441:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","RILPL2--SLC35F1","12:RILPL2:123436082:-:6:SLC35F1:118266995:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","MCRS1--SRRM4","12:MCRS1:49563001:-:12:SRRM4:119156495:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LS-01A","LINC00963--STXBP1","9:LINC00963:129503672:+:9:STXBP1:127668080:+:rev"]
["TCGA_SARC","TCGA-DX-A3LS-01A","SEMA5A--TGIF2-C20orf24","5:SEMA5A:9545584:-:20:TGIF2-C20orf24:36578741:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CEP85L--TMEM120B","6:CEP85L:118565529:-:12:TMEM120B:121743629:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CEP85L--WASHC3","6:CEP85L:118565529:-:12:WASHC3:102046119:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","ZNRF3--FAM19A5","22:ZNRF3:28987201:+:22:FAM19A5:48646597:+:reg"]
["TCGA_SARC","TCGA-DX-A3LT-01A","MOB2--KIAA1549L","11:MOB2:1480393:-:11:KIAA1549L:33645686:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LT-01A","RIC8B--LINC01533","12:RIC8B:106851594:+:19:LINC01533:32039493:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","ZDHHC13--MGAT4C","11:ZDHHC13:19152684:+:12:MGAT4C:85989552:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","SLC6A15--MYRFL","12:SLC6A15:84912523:-:12:MYRFL:69903644:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LT-01A","FAR1--PQLC2L","11:FAR1:13700492:+:3:PQLC2L:157553230:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","NAP1L1--PTPRR","12:NAP1L1:76084567:-:12:PTPRR:70764778:-:reg"]
["TCGA_SARC","TCGA-DX-A3LT-01A","ARNTL--RIC8B","11:ARNTL:13360424:+:12:RIC8B:106825726:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","AC010511.1--SLC6A15","19:AC010511.1:28065365:+:12:SLC6A15:84892308:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LT-01A","PTPRR--SLC6A15","12:PTPRR:70754191:-:12:SLC6A15:84892308:-:rev"]
["TCGA_SARC","TCGA-DX-A3LT-01A","HDAC7--SRGAP1","12:HDAC7:47788045:-:12:SRGAP1:64142295:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LT-01A","MARCH9--YEATS4","12:MARCH9:57757084:+:12:YEATS4:69362788:+:reg"]
["TCGA_SARC","TCGA-DX-A3LU-01A","MEA1--AL157371.3","6:MEA1:43012926:-:6:AL157371.3:43842511:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LU-01A","DHX15--CCND3","4:DHX15:24541873:-:6:CCND3:41940585:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LU-01A","ZNF318--CD2AP","6:ZNF318:43368967:-:6:CD2AP:47580864:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LU-01A","ZDHHC17--NCR2","12:ZDHHC17:76764329:+:6:NCR2:41336087:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LU-01A","QRSL1--VAV2","6:QRSL1:106643090:+:9:VAV2:133861432:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LW-01A","OS9--AC078962.4","12:OS9:57694323:+:12:AC078962.4:64599216:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LW-01A","CNOT2--ANO6","12:CNOT2:70311017:+:12:ANO6:45367688:+:rev"]
["TCGA_SARC","TCGA-DX-A3LW-01A","BLOC1S1--CPM","12:BLOC1S1:55717005:+:12:CPM:68885889:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LW-01A","RBM39--CRYZL1","20:RBM39:35716740:-:21:CRYZL1:33603537:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LW-01A","CDK2--PAN2","12:CDK2:55969576:+:12:PAN2:56325128:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LY-01B","ANKRD52--AC020637.1","12:ANKRD52:56244353:-:12:AC020637.1:58805941:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LY-01B","WDFY2--DLGAP2-AS1","13:WDFY2:51727790:+:8:DLGAP2-AS1:1565738:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","HDX--ERICH1","X:HDX:84502342:-:8:ERICH1:664676:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","VBP1--IL22","X:VBP1:155216575:+:12:IL22:68253494:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","SH3RF2--LINC02384","5:SH3RF2:145938306:+:12:LINC02384:68333664:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","PA2G4--MARK1","12:PA2G4:56104825:+:1:MARK1:220579354:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","DGKD--NDUFA10","2:DGKD:233390483:+:2:NDUFA10:240022340:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3LY-01B","USP12--NXF3","13:USP12:27089883:-:X:NXF3:103084495:-:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","DCTN2--SRGAP1","12:DCTN2:57546028:-:12:SRGAP1:63983947:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3LY-01B","NAA10--TBC1D30","X:NAA10:153934377:-:12:TBC1D30:64864668:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","DDX46--TPO","5:DDX46:134777725:+:2:TPO:1542421:+:fusion"]
["TCGA_SARC","TCGA-DX-A3LY-01B","OSBPL8--ZDHHC17","12:OSBPL8:76559397:-:12:ZDHHC17:76805317:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","MPRIP--AC002091.1","17:MPRIP:17180088:+:17:AC002091.1:8976758:+:rev"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CTDSP2--AC024909.1","12:CTDSP2:57846372:-:12:AC024909.1:89051267:-:rev"]
["TCGA_SARC","TCGA-DX-A3M1-01A","SYNRG--ADAP2","17:SYNRG:37561195:-:17:ADAP2:30921704:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CSMD3--ADCY8","8:CSMD3:113278592:-:8:ADCY8:130951998:-:rev"]
["TCGA_SARC","TCGA-DX-A3M1-01A","NF1--ASIC2","17:NF1:31233213:+:17:ASIC2:33112067:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CTDSP2--AUH","12:CTDSP2:57846372:-:9:AUH:91214425:-:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","VEZT--C12orf29","12:VEZT:95252071:+:12:C12orf29:88040148:+:rev"]
["TCGA_SARC","TCGA-DX-A3M1-01A","FAM129B--C16orf62","9:FAM129B:127523679:-:16:C16orf62:19691353:+:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","TANC2--CASC17","17:TANC2:63099246:+:17:CASC17:71185655:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","AC124947.1--CFAP54","12:AC124947.1:93328027:-:12:CFAP54:96875118:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","FRS2--CFAP54","12:FRS2:69470530:+:12:CFAP54:96699971:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","YEATS4--CFAP54","12:YEATS4:69360023:+:12:CFAP54:96699971:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","NDUFB9--CSMD3","8:NDUFB9:124543279:+:8:CSMD3:113314793:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CASC3--HNF1B","17:CASC3:40141607:+:17:HNF1B:37687392:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","TMTC3--LINC02401","12:TMTC3:88142487:+:12:LINC02401:103549498:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","ZNF292--MAP3K4","6:ZNF292:87155759:+:6:MAP3K4:161070608:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CPQ--MATN2","8:CPQ:96785330:+:8:MATN2:97930953:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","TNFRSF13B--MPRIP","17:TNFRSF13B:16948738:-:17:MPRIP:17057636:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","HMGA2--NR2C1","12:HMGA2:65838569:+:12:NR2C1:95067391:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","MRPL42--NTN4","12:MRPL42:93467554:+:12:NTN4:95738144:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","AL157935.2--NUP107","9:AL157935.2:127885186:-:12:NUP107:68741813:+:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","NTN4--NUP107","12:NTN4:95737866:-:12:NUP107:68741813:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","ST6GALNAC6--NUP107","9:ST6GALNAC6:127887484:-:12:NUP107:68741813:+:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","ST6GALNAC6--PAWR","9:ST6GALNAC6:127894512:-:12:PAWR:79596658:-:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","TMTC3--SLC35E3","12:TMTC3:88142487:+:12:SLC35E3:68759157:+:rev"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CFAP54--SLC5A8","12:CFAP54:96720565:+:12:SLC5A8:101195162:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","NDUFA12--ST6GALNAC6","12:NDUFA12:94994170:-:9:ST6GALNAC6:127896332:-:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","MDM2--SYK","12:MDM2:68809292:+:9:SYK:90895528:+:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","DCTN2--SYT1","12:DCTN2:57546028:-:12:SYT1:79353502:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","STAT5B--TENM4","17:STAT5B:42216014:-:11:TENM4:79215909:-:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","EDA--TEX11","X:EDA:69616704:+:X:TEX11:70873307:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","NTN4--TRHDE","12:NTN4:95710441:-:12:TRHDE:72286681:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CRAT--TTLL11","9:CRAT:129097250:-:9:TTLL11:121870748:-:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CRAT--TTLL11-IT1","9:CRAT:129097250:-:9:TTLL11-IT1:121885575:-:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","VPS53--TXNDC17","17:VPS53:655838:-:17:TXNDC17:6641753:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3M1-01A","LAMA2--UQCRB","6:LAMA2:129369990:+:8:UQCRB:96233227:-:fusion"]
["TCGA_SARC","TCGA-DX-A3M1-01A","WWP1--UTP23","8:WWP1:86431743:+:8:UTP23:116771456:+:reg"]
["TCGA_SARC","TCGA-DX-A3M1-01A","CEP290--VEZT","12:CEP290:88092681:-:12:VEZT:95251940:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","YEATS4--AC025569.1","12:YEATS4:69360023:+:12:AC025569.1:70507895:+:reg"]
["TCGA_SARC","TCGA-DX-A3U5-01A","CSRP2--AC025575.1","12:CSRP2:76878938:-:12:AC025575.1:71046741:-:reg"]
["TCGA_SARC","TCGA-DX-A3U5-01A","CSRP2--AC025575.2","12:CSRP2:76878938:-:12:AC025575.2:71047679:-:reg"]
["TCGA_SARC","TCGA-DX-A3U5-01A","SGMS2--AC084033.3","4:SGMS2:107858553:+:12:AC084033.3:57931737:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","SOS1--AC104078.1","2:SOS1:38987473:-:4:AC104078.1:36272947:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","SH2B3--ATXN2","12:SH2B3:111406277:+:12:ATXN2:111555919:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","NAV3--AVIL","12:NAV3:77325214:+:12:AVIL:57816059:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","SHPRH--B4GALNT1","6:SHPRH:145964157:-:12:B4GALNT1:57632133:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","LTA4H--BTBD11","12:LTA4H:96002960:-:12:BTBD11:107520487:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","NDUFA9--C12orf4","12:NDUFA9:4662635:+:12:C12orf4:4491234:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","BTBD11--CMKLR1","12:BTBD11:107581304:+:12:CMKLR1:108293664:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","GRM1--CNOT2","6:GRM1:146399699:+:12:CNOT2:70319298:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","ATP2B1--DCDC2","12:ATP2B1:89709219:-:6:DCDC2:24302044:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","BTBD2--KIAA1109","19:BTBD2:1990004:-:4:KIAA1109:122186036:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","PTPRR--LINC02410","12:PTPRR:70920333:-:12:LINC02410:95823089:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","HECTD4--LTA4H","12:HECTD4:112381952:-:12:LTA4H:96006409:-:reg"]
["TCGA_SARC","TCGA-DX-A3U5-01A","TMTC2--LYZ","12:TMTC2:82986046:+:12:LYZ:69350108:+:rev"]
["TCGA_SARC","TCGA-DX-A3U5-01A","PDE5A--NBAT1","4:PDE5A:119596523:-:6:NBAT1:22136669:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","KIAA1109--NFKB1","4:KIAA1109:122154112:+:4:NFKB1:102525512:+:rev"]
["TCGA_SARC","TCGA-DX-A3U5-01A","CSNK1G2--PDE5A","19:CSNK1G2:1969959:+:4:PDE5A:119607297:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","MDM1--PDZRN4","12:MDM1:68313443:-:12:PDZRN4:41506456:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","RSF1--PRRC2C","11:RSF1:77685105:-:1:PRRC2C:171566233:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","GNL1--REPS1","6:GNL1:30552467:-:6:REPS1:138921124:-:rev"]
["TCGA_SARC","TCGA-DX-A3U5-01A","FRS2--SBF2","12:FRS2:69532056:+:11:SBF2:9795957:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U5-01A","AC025575.1--SNRPF","12:AC025575.1:71046678:-:12:SNRPF:95861168:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","CSRP2--SNRPF","12:CSRP2:76878938:-:12:SNRPF:95861168:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","PTPRR--SNRPF","12:PTPRR:70920333:-:12:SNRPF:95861168:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U5-01A","PLXNC1--TXNRD1","12:PLXNC1:94282401:+:12:TXNRD1:104348353:+:reg"]
["TCGA_SARC","TCGA-DX-A3U5-01A","UHRF1BP1L--ZDHHC17","12:UHRF1BP1L:100108386:-:12:ZDHHC17:76797434:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U6-01A","MSRB3--ACTR5","12:MSRB3:65369026:+:20:ACTR5:38771559:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U6-01A","LRP1--CAND1","12:LRP1:57202537:+:12:CAND1:67292622:+:reg"]
["TCGA_SARC","TCGA-DX-A3U6-01A","DYRK2--CNTN2","12:DYRK2:67649945:+:1:CNTN2:205053100:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U6-01A","PRRC2C--MIF-AS1","1:PRRC2C:171584187:+:22:MIF-AS1:23896110:-:fusion"]
["TCGA_SARC","TCGA-DX-A3U6-01A","NUP107--PAAF1","12:NUP107:68722152:+:11:PAAF1:73909399:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U6-01A","CNTN2--PKP1","1:CNTN2:205053255:+:1:PKP1:201293942:+:rev"]
["TCGA_SARC","TCGA-DX-A3U6-01A","TBC1D32--RPF2","6:TBC1D32:121303617:-:6:RPF2:111024183:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U6-01A","DNM3--TPH2","1:DNM3:172253682:+:12:TPH2:71994439:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U6-01A","R3HDM2--TPH2","12:R3HDM2:57395749:-:12:TPH2:71972519:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3U7-01A","PID1--AP000317.2","2:PID1:229155818:-:21:AP000317.2:34125341:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U7-01A","AGAP1--ATG4B","2:AGAP1:235494849:+:2:ATG4B:241651010:+:reg"]
["TCGA_SARC","TCGA-DX-A3U7-01A","PID1--MRPS6","2:PID1:229155818:-:21:MRPS6:34125341:+:fusion"]
["TCGA_SARC","TCGA-DX-A3U7-01A","ZNF793--ST3GAL6","19:ZNF793:37522647:+:3:ST3GAL6:98820788:+:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","NPHP3-ACAD11--ABCE1","3:NPHP3-ACAD11:132641972:-:4:ABCE1:145104386:+:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","SETD7--ACAD11","4:SETD7:139517885:-:3:ACAD11:132644896:-:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","ITSN1--HNRNPUL1","21:ITSN1:33755397:+:19:HNRNPUL1:41302665:+:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","SEC61A1--INPP4B","3:SEC61A1:128068059:+:4:INPP4B:142028914:-:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","AC008969.1--LRP3","19:AC008969.1:58003046:+:19:LRP3:33196730:+:rev"]
["TCGA_SARC","TCGA-DX-A3UA-01A","SETD7--NPHP3-ACAD11","4:SETD7:139517885:-:3:NPHP3-ACAD11:132644896:-:fusion"]
["TCGA_SARC","TCGA-DX-A3UA-01A","TPM3--NTRK1","1:TPM3:154170400:-:1:NTRK1:156875520:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UA-01A","LINC02006--TNIK","3:LINC02006:153604646:-:3:TNIK:171140509:-:rev"]
["TCGA_SARC","TCGA-DX-A3UA-01A","ZNF83--ZNF471","19:ZNF83:52655561:-:19:ZNF471:56524324:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UC-01A","RPS6KA3--KDM6A","X:RPS6KA3:20240569:-:X:KDM6A:45106542:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UC-01A","KDM6A--RPS6KA3","X:KDM6A:45090864:+:X:RPS6KA3:20234814:-:strandcross"]
["TCGA_SARC","TCGA-DX-A3UD-01A","VCL--LRMDA","10:VCL:74101097:+:10:LRMDA:76557209:+:reg"]
["TCGA_SARC","TCGA-DX-A3UF-01A","CLEC2B--AC008014.1","12:CLEC2B:9869205:-:12:AC008014.1:46874817:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UF-01A","RB1--CLEC2B","13:RB1:48307406:+:12:CLEC2B:9857637:-:fusion"]
["TCGA_SARC","TCGA-DX-A3UF-01A","FAM126B--COQ10B","2:FAM126B:201045496:-:2:COQ10B:197459932:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UF-01A","UBE2G2--MIR99AHG","21:UBE2G2:44801706:-:21:MIR99AHG:16537379:+:strandcross"]
["TCGA_SARC","TCGA-DX-A3UF-01A","GNG7--PAQR5","19:GNG7:2520608:-:15:PAQR5:69399974:+:fusion"]
["TCGA_SARC","TCGA-DX-A48K-01A","NUP62--P4HB","19:NUP62:49927694:-:17:P4HB:81847347:-:fusion"]
["TCGA_SARC","TCGA-DX-A48L-01A","FXR2--AC087500.1","17:FXR2:7601409:-:17:AC087500.1:5234948:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48L-01A","GGACT--INCA1","13:GGACT:100583825:-:17:INCA1:4990265:-:fusion"]
["TCGA_SARC","TCGA-DX-A48L-01A","DHX33--KIF1C","17:DHX33:5468571:-:17:KIF1C:5014743:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48L-01A","ZFAND2B--LINC00969","2:ZFAND2B:219208348:+:3:LINC00969:195708134:+:fusion"]
["TCGA_SARC","TCGA-DX-A48L-01A","USP14--NOL4","18:USP14:180339:+:18:NOL4:33883424:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48L-01A","RNASEK-C17orf49--STK39","17:RNASEK-C17orf49:7015156:+:2:STK39:168161842:-:fusion"]
["TCGA_SARC","TCGA-DX-A48L-01A","SVIL-AS1--TPCN2","10:SVIL-AS1:29415412:+:11:TPCN2:69054033:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","TMTC2--AC073591.1","12:TMTC2:82896646:+:12:AC073591.1:77390471:+:rev"]
["TCGA_SARC","TCGA-DX-A48N-01A","CNOT2--AC128707.1","12:CNOT2:70311017:+:12:AC128707.1:78468567:+:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","SLC35E3--ACAD10","12:SLC35E3:68746779:+:12:ACAD10:111747049:+:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","EDEM3--AL031056.1","1:EDEM3:184732837:-:6:AL031056.1:149244001:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","GPC1--ATP23","2:GPC1:240436084:+:12:ATP23:57945628:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","METTL25--ATP2B1","12:METTL25:82399394:+:12:ATP2B1:89611372:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","CCDC59--CHST11","12:CCDC59:82358223:-:12:CHST11:104756949:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","NAV3--CHST11","12:NAV3:77831704:+:12:CHST11:104601906:+:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","SWT1--COLGALT2","1:SWT1:185231708:+:1:COLGALT2:183978520:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","ZNF407--CYB5A","18:ZNF407:74641122:+:18:CYB5A:74255775:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","RNF2--DNM3","1:RNF2:185091739:+:1:DNM3:171987656:+:rev"]
["TCGA_SARC","TCGA-DX-A48N-01A","SLC41A2--DNM3","12:SLC41A2:104886293:-:1:DNM3:172131175:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","FAM114A1--FRS2","4:FAM114A1:38891830:+:12:FRS2:69530865:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","TMTC2--GNA14","12:TMTC2:82896646:+:9:GNA14:77529253:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","TMEM2--HMCN1","9:TMEM2:71694509:-:1:HMCN1:185909337:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","COLGALT2--LINC00682","1:COLGALT2:184037095:-:4:LINC00682:41873201:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","UTRN--LINC01350","6:UTRN:144499427:+:1:LINC01350:185607401:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","APBB2--LINC02373","4:APBB2:40934456:-:12:LINC02373:69459517:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","HIVEP2--MAP7","6:HIVEP2:142836935:-:6:MAP7:136421799:-:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","UBQLN1--NAV3","9:UBQLN1:83707500:-:12:NAV3:77998337:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","UTRN--OSTF1","6:UTRN:144730486:+:9:OSTF1:75117504:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","PTAR1--PIP5K1B","9:PTAR1:69732139:-:9:PIP5K1B:68888981:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","CCDC91--PTK2","12:CCDC91:28452654:+:8:PTK2:140686694:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","NAV3--RGL1","12:NAV3:78190219:+:1:RGL1:183847566:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","LINC01481--SLC41A2","12:LINC01481:70242797:-:12:SLC41A2:104805337:-:rev"]
["TCGA_SARC","TCGA-DX-A48N-01A","TXNRD1--SLC41A2","12:TXNRD1:104327671:+:12:SLC41A2:104845974:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","OSTF1--SMARCA4","9:OSTF1:75088726:+:19:SMARCA4:11030730:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","TTLL5--TCP11L2","14:TTLL5:75752955:+:12:TCP11L2:106340826:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","ZNF493--TMBIM4","19:ZNF493:21397267:+:12:TMBIM4:66153448:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","CNOT2--TMEM2","12:CNOT2:70311017:+:9:TMEM2:71704803:-:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","NAV3--TMTC2","12:NAV3:77325214:+:12:TMTC2:82930431:+:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","ENTPD5--TSHR","14:ENTPD5:73986814:-:14:TSHR:81092531:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","PLEKHA5--UHRF1","12:PLEKHA5:19269885:+:19:UHRF1:4941528:+:fusion"]
["TCGA_SARC","TCGA-DX-A48N-01A","NUAK1--UHRF1BP1L","12:NUAK1:106106405:-:12:UHRF1BP1L:100039789:-:reg"]
["TCGA_SARC","TCGA-DX-A48N-01A","TMTC1--YEATS4","12:TMTC1:29556857:-:12:YEATS4:69390147:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48N-01A","EDEM3--ZNF66","1:EDEM3:184734531:-:19:ZNF66:20792512:+:fusion"]
["TCGA_SARC","TCGA-DX-A48P-01A","TP53--AP001596.1","17:TP53:7687377:-:21:AP001596.1:26470751:+:fusion"]
["TCGA_SARC","TCGA-DX-A48P-01A","TP53--CYYR1-AS1","17:TP53:7687377:-:21:CYYR1-AS1:26503582:+:fusion"]
["TCGA_SARC","TCGA-DX-A48P-01A","SIL1--PAIP2","5:SIL1:139121035:-:5:PAIP2:139363759:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48P-01A","PAIP2--SIL1","5:PAIP2:139341980:+:5:SIL1:139051046:-:strandcross"]
["TCGA_SARC","TCGA-DX-A48R-01A","GRK5--SUMF1","10:GRK5:119431527:+:3:SUMF1:4068745:-:fusion"]
["TCGA_SARC","TCGA-DX-A48U-01A","PABPC4--MACF1","1:PABPC4:39568802:-:1:MACF1:39451052:+:strandcross"]
["TCGA_SARC","TCGA-DX-A48U-01A","NLGN4Y--SHISA6","Y:NLGN4Y:14723269:+:17:SHISA6:11555740:+:fusion"]
["TCGA_SARC","TCGA-DX-A48U-01A","MIPOL1--TRIM38","14:MIPOL1:37422949:+:6:TRIM38:25971869:+:fusion"]
["TCGA_SARC","TCGA-DX-A6B9-01A","PYCR1--BRI3BP","17:PYCR1:81936748:-:12:BRI3BP:125012534:+:fusion"]
["TCGA_SARC","TCGA-DX-A6B9-01A","SEPT9--C17orf97","17:SEPT9:77307197:+:17:C17orf97:423480:+:rev"]
["TCGA_SARC","TCGA-DX-A6B9-01A","CHFR--ZNF565","12:CHFR:132853431:-:19:ZNF565:36195156:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BA-01A","DDOST--CUX1","1:DDOST:20660881:-:7:CUX1:102028098:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","TLE1--AC090503.2","9:TLE1:81685676:-:12:AC090503.2:73129161:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","KCNMB4--AC129492.4","12:KCNMB4:70367070:+:17:AC129492.4:8181399:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","DNMT1--AL353613.1","19:DNMT1:10166598:-:9:AL353613.1:86696133:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","AC011603.2--DIP2B","12:AC011603.2:48998690:+:12:DIP2B:50640724:+:reg"]
["TCGA_SARC","TCGA-DX-A6BE-01A","CARNMT1--KIF21A","9:CARNMT1:75028012:-:12:KIF21A:39370261:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","GNS--LINC02442","12:GNS:64747712:-:12:LINC02442:67587306:-:rev"]
["TCGA_SARC","TCGA-DX-A6BE-01A","LEMD3--LYZ","12:LEMD3:65171118:+:12:LYZ:69350108:+:reg"]
["TCGA_SARC","TCGA-DX-A6BE-01A","NAP1L1--OSTF1","12:NAP1L1:76074203:-:9:OSTF1:75137538:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","ARID2--PTPRB","12:ARID2:45731314:+:12:PTPRB:70540022:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BE-01A","PCSK5--RAB3IP","9:PCSK5:75891373:+:12:RAB3IP:69784720:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","ZNF562--SARNP","19:ZNF562:9675015:-:12:SARNP:55752840:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BE-01A","ZCCHC6--WIF1","9:ZCCHC6:86325334:-:12:WIF1:65062576:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BF-01A","USP15--AL645568.1","12:USP15:62355475:+:1:AL645568.1:173418622:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BF-01A","PACS1--AP000439.2","11:PACS1:66070842:+:11:AP000439.2:69477613:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BF-01A","FADS1--AP005019.1","11:FADS1:61810751:-:11:AP005019.1:72587801:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BF-01A","MYRFL--BEST3","12:MYRFL:69855370:+:12:BEST3:69643787:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BF-01A","ACVR2A--CPQ","2:ACVR2A:147845207:+:8:CPQ:96834973:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BF-01A","FRS2--GLIPR1L2","12:FRS2:69470530:+:12:GLIPR1L2:75422904:+:reg"]
["TCGA_SARC","TCGA-DX-A6BF-01A","ARL1--UBE2N","12:ARL1:101407642:-:12:UBE2N:93411299:-:reg"]
["TCGA_SARC","TCGA-DX-A6BF-01A","CCNK--ZNF365","14:CCNK:99495629:+:10:ZNF365:62666129:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","UHRF1BP1L--AC083805.2","12:UHRF1BP1L:100142592:-:12:AC083805.2:57842259:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","PAM--AL035665.1","5:PAM:102755348:+:20:AL035665.1:40698122:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","PAM--ARHGAP15","5:PAM:102755348:+:2:ARHGAP15:143767989:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","CCT2--CACNG3","12:CCT2:69585524:+:16:CACNG3:24361352:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","UHRF1BP1L--CACNG3","12:UHRF1BP1L:100142592:-:16:CACNG3:24361352:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","DNM3--CD247","1:DNM3:172131288:+:1:CD247:167440767:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","AGAP2--CNOT2","12:AGAP2:57731366:-:12:CNOT2:70335438:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","ITGB6--CNOT2","2:ITGB6:160107679:-:12:CNOT2:70337389:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","TBC1D15--CNOT2","12:TBC1D15:71896780:+:12:CNOT2:70337389:+:rev"]
["TCGA_SARC","TCGA-DX-A6BG-01A","METTL25--CPM","12:METTL25:82456820:+:12:CPM:68932840:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","HMGA2--DAB1","12:HMGA2:65838569:+:1:DAB1:56998128:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","MPC2--DNM3","1:MPC2:167935733:-:1:DNM3:172387133:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","OSMR--DNM3","5:OSMR:38869117:+:1:DNM3:172081832:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","TIPRL--EFL1","1:TIPRL:168179181:+:15:EFL1:82163984:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","CTDSP2--LINC01363","12:CTDSP2:57846372:-:1:LINC01363:167195156:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","FRS2--LINC01363","12:FRS2:69532056:+:1:LINC01363:167195156:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","RICTOR--LINC01363","5:RICTOR:39074111:-:1:LINC01363:167195156:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","TOP1--LYZ","20:TOP1:41101353:+:12:LYZ:69350108:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","MPC2--NUDT12","1:MPC2:167935733:-:5:NUDT12:103560250:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","FRS2--RAB21","12:FRS2:69470530:+:12:RAB21:71769800:+:reg"]
["TCGA_SARC","TCGA-DX-A6BG-01A","ZEB1--SYT1","10:ZEB1:31319292:+:12:SYT1:78864998:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","UHRF1BP1L--TSFM","12:UHRF1BP1L:100128580:-:12:TSFM:57796177:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BG-01A","MYLK--VAMP4","3:MYLK:123793677:-:1:VAMP4:171710814:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BG-01A","FRS2--ZFC3H1","12:FRS2:69532056:+:12:ZFC3H1:71611887:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BH-01A","PLEKHG1--AC078820.1","6:PLEKHG1:150832205:+:12:AC078820.1:75694975:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","FOXP2--AC078845.1","7:FOXP2:114086611:+:7:AC078845.1:136328982:+:reg"]
["TCGA_SARC","TCGA-DX-A6BH-01A","PLEKHG1--AC078923.1","6:PLEKHG1:150832205:+:12:AC078923.1:75631314:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","TRERF1--ADGRF2","6:TRERF1:42451177:-:6:ADGRF2:47673391:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BH-01A","FRS2--AKAP12","12:FRS2:69532056:+:6:AKAP12:151305747:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","UTRN--AL138733.1","6:UTRN:144577288:+:6:AL138733.1:151151138:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BH-01A","NHSL1--AL590617.2","6:NHSL1:138545623:-:6:AL590617.2:138696597:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6BH-01A","CADPS2--ATP23","7:CADPS2:122885999:-:12:ATP23:57945628:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","AKAP12--CCND3","6:AKAP12:151240724:+:6:CCND3:41937394:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6BH-01A","PLAGL1--CPM","6:PLAGL1:143960469:-:12:CPM:68957678:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","AASS--DNM3","7:AASS:122091703:-:1:DNM3:172131175:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","FOXP2--EPM2A","7:FOXP2:114163088:+:6:EPM2A:145384097:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","RFWD2--GRM1","1:RFWD2:176184633:-:6:GRM1:146352250:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","CPSF6--GRM8","12:CPSF6:69262562:+:7:GRM8:127106712:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","TNFAIP3--IL26","6:TNFAIP3:137871522:+:12:IL26:68202083:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","REPS1--KCNMB4","6:REPS1:138920215:-:12:KCNMB4:70400209:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","UTRN--LAMB4","6:UTRN:144448769:+:7:LAMB4:108037595:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","AC078845.1--MYRFL","7:AC078845.1:136329097:+:12:MYRFL:69957822:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","SRI--PIP4K2C","7:SRI:88210882:-:12:PIP4K2C:57594025:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","FRS2--RFWD2","12:FRS2:69470530:+:1:RFWD2:176027688:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","LAMB1--SELE","7:LAMB1:107962905:-:1:SELE:169734123:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","DNM3--SHISA9","1:DNM3:172253682:+:16:SHISA9:13235030:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","DLD--SHPRH","7:DLD:107902393:+:6:SHPRH:145864491:-:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","DNM3--U91319.1","1:DNM3:172253682:+:16:U91319.1:13258333:+:fusion"]
["TCGA_SARC","TCGA-DX-A6BH-01A","ADGRF4--UTRN","6:ADGRF4:47698794:+:6:UTRN:144678406:+:reg"]
["TCGA_SARC","TCGA-DX-A6BH-01A","NHSL1--UTRN","6:NHSL1:138473306:-:6:UTRN:144403123:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","TFRC--AC128707.1","3:TFRC:196064309:-:12:AC128707.1:78423192:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","MYO9B--CPAMD8","19:MYO9B:17206152:+:19:CPAMD8:16980686:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","DNAAF5--LAMA5","7:DNAAF5:729847:+:20:LAMA5:62311094:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","RGS17--PDLIM5","6:RGS17:153043900:-:4:PDLIM5:94662422:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YR-01A","NRIP1--DSCAM","21:NRIP1:15014344:-:21:DSCAM:40084006:-:rev"]
["TCGA_SARC","TCGA-DX-A6YR-01A","HMBOX1--MCM3","8:HMBOX1:28890678:+:6:MCM3:52269226:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YR-01A","USP38--RIT2","4:USP38:143187961:+:18:RIT2:42743720:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","ARHGAP35--AC022360.2","19:ARHGAP35:46937408:+:8:AC022360.2:111745442:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","SOX6--AC034228.3","11:SOX6:16605901:-:5:AC034228.3:131959605:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","EIF5--CTAGE5","14:EIF5:103341125:+:14:CTAGE5:39326864:+:rev"]
["TCGA_SARC","TCGA-DX-A6YS-01A","CTNNA1--CYSTM1","5:CTNNA1:138783372:+:5:CYSTM1:140243305:+:reg"]
["TCGA_SARC","TCGA-DX-A6YS-01A","MTF1--IGFBP7-AS1","1:MTF1:37838625:-:4:IGFBP7-AS1:57201133:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","SRFBP1--LINC01170","5:SRFBP1:121994670:+:5:LINC01170:124059948:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YS-01A","CATSPERE--LINC01470","1:CATSPERE:244593578:+:5:LINC01470:152820300:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","MBNL2--MADD","13:MBNL2:97276409:+:11:MADD:47308591:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","EXO5--MTF1","1:EXO5:40508877:+:1:MTF1:37857709:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YS-01A","GRB10--SCMH1","7:GRB10:50614770:-:1:SCMH1:41028726:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YS-01A","APPBP2--SETD2","17:APPBP2:60494466:-:3:SETD2:47019840:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YT-01A","UTP6--SLC13A5","17:UTP6:31892260:-:17:SLC13A5:6707156:-:reg"]
["TCGA_SARC","TCGA-DX-A6YT-01A","STXBP6--ZNF410","14:STXBP6:24974665:-:14:ZNF410:73903960:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6YU-01A","MAN2A1--HTR4","5:MAN2A1:109789527:+:5:HTR4:148451272:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YV-01A","PHC2--MFSD11","1:PHC2:33349597:-:17:MFSD11:76767386:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YV-01A","ATF6--PLCL2-AS1","1:ATF6:161863312:+:3:PLCL2-AS1:17042913:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YV-01A","URI1--RHPN2","19:URI1:29942664:+:19:RHPN2:32994053:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YV-01A","GLI2--SPOP","2:GLI2:120797468:+:17:SPOP:49622876:-:fusion"]
["TCGA_SARC","TCGA-DX-A6YV-01A","IFI16--UAP1","1:IFI16:159016700:+:1:UAP1:162576777:+:reg"]
["TCGA_SARC","TCGA-DX-A6YX-01A","ASAP1--AC083923.2","8:ASAP1:130401885:-:8:AC083923.2:126713286:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6YX-01A","ZFHX4--TRAM1","8:ZFHX4:76778439:+:8:TRAM1:70575005:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YX-01A","ASAP1--TRAPPC9","8:ASAP1:130208630:-:8:TRAPPC9:139731228:-:rev"]
["TCGA_SARC","TCGA-DX-A6YZ-01A","SMAD3--AC136188.1","15:SMAD3:67099024:+:12:AC136188.1:73906940:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YZ-01A","SEC23B--NAPB","20:SEC23B:18507990:+:20:NAPB:23381317:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6YZ-01A","LLGL1--TLN2","17:LLGL1:18238609:+:15:TLN2:62722353:+:fusion"]
["TCGA_SARC","TCGA-DX-A6YZ-01A","USP8--TSPAN3","15:USP8:50465191:+:15:TSPAN3:77056255:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6Z0-01A","TSPAN18--AL034399.2","11:TSPAN18:44860469:+:X:AL034399.2:107933120:-:fusion"]
["TCGA_SARC","TCGA-DX-A6Z0-01A","UBE3C--PTPRN2","7:UBE3C:157139338:+:7:PTPRN2:158138515:-:strandcross"]
["TCGA_SARC","TCGA-DX-A6Z0-01A","LMBR1--UBE3C","7:LMBR1:156892928:-:7:UBE3C:157186834:+:strandcross"]
["TCGA_SARC","TCGA-DX-A6Z0-01A","PTPRS--ZNF627","19:PTPRS:5274199:-:19:ZNF627:11614527:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EF-01A","PRMT7--EXOC4","16:PRMT7:68346280:+:7:EXOC4:133895599:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EF-01A","TP53--PXDNL","17:TP53:7674181:-:8:PXDNL:51654760:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EF-01A","TRIO--TERT","5:TRIO:14420021:+:5:TERT:1282624:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","TBC1D30--AC025569.1","12:TBC1D30:64786045:+:12:AC025569.1:70507895:+:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","RAB3IP--AC025575.2","12:RAB3IP:69756663:+:12:AC025575.2:71047679:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","TBC1D30--AC090673.2","12:TBC1D30:64786045:+:12:AC090673.2:65935129:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","ACSS3--AC108721.1","12:ACSS3:81143247:+:12:AC108721.1:59403310:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","AC025263.2--AC138123.2","12:AC025263.2:69801721:+:12:AC138123.2:93215679:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","RAB3IP--AC138123.2","12:RAB3IP:69800332:+:12:AC138123.2:93215679:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","FRS2--ACSS3","12:FRS2:69470530:+:12:ACSS3:81134816:+:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","GATAD2B--ACSS3","1:GATAD2B:153922733:-:12:ACSS3:81199341:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","NAV3--ACSS3","12:NAV3:77325214:+:12:ACSS3:81134816:+:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","SLC16A7--ACSS3","12:SLC16A7:59596236:+:12:ACSS3:81134816:+:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","KIFAP3--AL031275.1","1:KIFAP3:169954011:-:1:AL031275.1:168763616:-:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","SUCO--AL031275.1","1:SUCO:172570730:+:1:AL031275.1:168763616:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","NR2C1--BCL7A","12:NR2C1:95067331:-:12:BCL7A:122030700:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","AC048338.1--BICRAL","12:AC048338.1:122232326:-:6:BICRAL:42855856:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","IRX2--C5orf38","5:IRX2:2748345:-:5:C5orf38:2755029:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","MEF2D--CD55","1:MEF2D:156500486:-:1:CD55:207359546:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","FBXL7--CDH10","5:FBXL7:15616072:+:5:CDH10:24593613:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","NAV1--CPM","1:NAV1:201740076:+:12:CPM:68885889:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","ACSS3--CYP39A1","12:ACSS3:81078428:+:6:CYP39A1:46550437:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","MRPL42--FGD6","12:MRPL42:93487660:+:12:FGD6:95081556:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","TRIP13--GPATCH2","5:TRIP13:914577:+:1:GPATCH2:217431365:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","EEA1--HOTAIR","12:EEA1:92929043:-:12:HOTAIR:53968756:-:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","MRPL42--IFNG-AS1","12:MRPL42:93479472:+:12:IFNG-AS1:68234529:+:rev"]
["TCGA_SARC","TCGA-DX-A7EI-01A","DDIT3--LINC02384","12:DDIT3:57520418:-:12:LINC02384:68433371:-:rev"]
["TCGA_SARC","TCGA-DX-A7EI-01A","MYRFL--LINC02402","12:MYRFL:69936632:+:12:LINC02402:42644294:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","PRICKLE1--LINC02412","12:PRICKLE1:42589465:-:12:LINC02412:93175900:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","PRICKLE1--LRIG3","12:PRICKLE1:42589465:-:12:LRIG3:58890796:-:rev"]
["TCGA_SARC","TCGA-DX-A7EI-01A","CTDSP2--LSM14A","12:CTDSP2:57846372:-:19:LSM14A:34208929:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","PAWR--MARC1","12:PAWR:79689729:-:1:MARC1:220796643:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","DISC1--MDM1","1:DISC1:231818517:+:12:MDM1:68321628:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","KIF5A--NAV3","12:KIF5A:57583215:+:12:NAV3:78200473:+:reg"]
["TCGA_SARC","TCGA-DX-A7EI-01A","ARHGEF25--NTRK1","12:ARHGEF25:57615017:+:1:NTRK1:156871623:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","FRS2--PARP1","12:FRS2:69470530:+:1:PARP1:226370517:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","NCAM2--PAWR","21:NCAM2:21374013:+:12:PAWR:79668408:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","GRAMD1A--RAB3IP","19:GRAMD1A:35000486:+:12:RAB3IP:69800209:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","SLC38A2--RAB3IP","12:SLC38A2:46372509:-:12:RAB3IP:69784720:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","ARFGEF1--SHC1","8:ARFGEF1:67299209:-:1:SHC1:154970199:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","NAV3--SLC25A27","12:NAV3:77325214:+:6:SLC25A27:46668709:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","YEATS4--SLC25A27","12:YEATS4:69370975:+:6:SLC25A27:46668709:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","AC134511.1--SYT1","12:AC134511.1:67069050:-:12:SYT1:79285787:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","FRS2--TBK1","12:FRS2:69470530:+:12:TBK1:64466901:+:rev"]
["TCGA_SARC","TCGA-DX-A7EI-01A","CTDSP2--TMTC2","12:CTDSP2:57846372:-:12:TMTC2:83132210:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EI-01A","LSM14A--TMTC2","19:LSM14A:34209051:+:12:TMTC2:83132210:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EI-01A","MARC1--VPS33A","1:MARC1:220798014:+:12:VPS33A:122264199:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EM-01A","DNAJC7--AC005726.2","17:DNAJC7:42017340:-:17:AC005726.2:28605215:-:reg"]
["TCGA_SARC","TCGA-DX-A7EN-01A","ZNF540--ZNF536","19:ZNF540:37601105:+:19:ZNF536:30710757:+:rev"]
["TCGA_SARC","TCGA-DX-A7ES-01A","DOT1L--AC020637.1","19:DOT1L:2194577:+:12:AC020637.1:58812414:+:fusion"]
["TCGA_SARC","TCGA-DX-A7ES-01A","ELK3--AC090502.1","12:ELK3:96223773:+:12:AC090502.1:74157884:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7ES-01A","CAND1--IL22","12:CAND1:67292776:+:12:IL22:68248876:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7ET-01A","KIF16B--AL033384.1","20:KIF16B:16494291:-:6:AL033384.1:53982758:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","STRN3--AC087627.1","14:STRN3:31025904:-:8:AC087627.1:74207721:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","STRN3--AC087672.3","14:STRN3:31025904:-:8:AC087672.3:74099419:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","AL117190.1--AKAP6","14:AL117190.1:100836300:+:14:AKAP6:32535554:+:rev"]
["TCGA_SARC","TCGA-DX-A7EU-01A","ZNF782--AL162394.1","9:ZNF782:96844890:-:9:AL162394.1:99536623:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EU-01A","PAMR1--AP005229.1","11:PAMR1:35474630:-:18:AP005229.1:11368652:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","SKI--CAPZB","1:SKI:2229735:+:1:CAPZB:19419750:-:strandcross"]
["TCGA_SARC","TCGA-DX-A7EU-01A","DPP3--FAM163A","11:DPP3:66482470:+:1:FAM163A:179807798:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","PPM1G--KATNA1","2:PPM1G:27409303:-:6:KATNA1:149598350:-:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","ARRB1--LY9","11:ARRB1:75351588:-:1:LY9:160813636:+:fusion"]
["TCGA_SARC","TCGA-DX-A7EU-01A","DVL1--PLCH2","1:DVL1:1337977:-:1:PLCH2:2502112:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EU-01A","CA6--RER1","1:CA6:8949442:+:1:RER1:2403035:+:rev"]
["TCGA_SARC","TCGA-DX-A7EU-01A","ENO1--TAS1R1","1:ENO1:8867988:-:1:TAS1R1:6579296:+:strandcross"]
["TCGA_SARC","TCGA-DX-A7EU-01A","CHD8--TG","14:CHD8:21456032:-:8:TG:133131812:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BG-01A","AATF--AP2B1","17:AATF:36953907:+:17:AP2B1:35710234:+:rev"]
["TCGA_SARC","TCGA-DX-A8BG-01A","FER--COMMD10","5:FER:108835807:+:5:COMMD10:116291517:+:reg"]
["TCGA_SARC","TCGA-DX-A8BG-01A","UBE2R2--FOCAD","9:UBE2R2:33817934:+:9:FOCAD:20993253:+:rev"]
["TCGA_SARC","TCGA-DX-A8BG-01A","STAT1--SUMO1","2:STAT1:190974830:-:2:SUMO1:202210806:-:rev"]
["TCGA_SARC","TCGA-DX-A8BG-01A","OGFOD3--TTC25","17:OGFOD3:82415398:-:17:TTC25:41961382:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BH-01A","RNF38--CCL19","9:RNF38:36487308:-:9:CCL19:34690342:-:reg"]
["TCGA_SARC","TCGA-DX-A8BH-01A","MFSD1--CLDN11","3:MFSD1:158809287:+:3:CLDN11:170754389:+:reg"]
["TCGA_SARC","TCGA-DX-A8BH-01A","DLG1--FAIM","3:DLG1:197194425:-:3:FAIM:138621407:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BH-01A","ZCCHC7--UNC13B","9:ZCCHC7:37126942:+:9:UNC13B:35366947:+:rev"]
["TCGA_SARC","TCGA-DX-A8BJ-01A","PPHLN1--AC090023.2","12:PPHLN1:42355222:+:12:AC090023.2:65663209:+:reg"]
["TCGA_SARC","TCGA-DX-A8BK-01A","PDZD4--CMC4","X:PDZD4:153830239:-:X:CMC4:155064033:-:rev"]
["TCGA_SARC","TCGA-DX-A8BK-01A","ABR--LINC01048","17:ABR:1031598:-:13:LINC01048:37484393:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BK-01A","MTUS2--SIRT7","13:MTUS2:29480364:+:17:SIRT7:81917967:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BK-01A","EHD4--TEX41","15:EHD4:41972259:-:2:TEX41:145182204:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BL-01A","AKAP8L--CHAF1A","19:AKAP8L:15403475:-:19:CHAF1A:4444544:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BL-01A","ZNF226--EIF3K","19:ZNF226:44165807:+:19:EIF3K:38620337:+:rev"]
["TCGA_SARC","TCGA-DX-A8BL-01A","CCDC50--LSAMP","3:CCDC50:191370036:+:3:LSAMP:116444955:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BL-01A","CLEC3B--POMGNT2","3:CLEC3B:45030925:+:3:POMGNT2:43081536:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BL-01A","HAUS8--QTRT1","19:HAUS8:17073274:-:19:QTRT1:10712161:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BL-01A","MAP4--RBM42","3:MAP4:47914817:-:19:RBM42:35632936:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BL-01A","HIVEP2--RSPO3","6:HIVEP2:142945944:-:6:RSPO3:127148648:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BL-01A","KDM6A--SSX1","X:KDM6A:44873987:+:X:SSX1:48257222:+:reg"]
["TCGA_SARC","TCGA-DX-A8BL-01A","TMEM161A--TIMM44","19:TMEM161A:19130156:-:19:TIMM44:7935145:-:reg"]
["TCGA_SARC","TCGA-DX-A8BL-01A","COPE--TMED1","19:COPE:18912984:-:19:TMED1:10835353:-:reg"]
["TCGA_SARC","TCGA-DX-A8BM-01A","ZNF586--AATF","19:ZNF586:57769878:+:17:AATF:37056601:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","TAOK1--AC008109.1","17:TAOK1:29522519:+:18:AC008109.1:1566452:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","MED29--AC008736.1","19:MED29:39391638:+:19:AC008736.1:32687268:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BM-01A","ARNT2--AC009292.2","15:ARNT2:80581404:+:15:AC009292.2:67873697:+:rev"]
["TCGA_SARC","TCGA-DX-A8BM-01A","ITGA11--ADAMTSL3","15:ITGA11:68313779:-:15:ADAMTSL3:83961573:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BM-01A","SNRNP70--CTNNA2","19:SNRNP70:49090520:+:2:CTNNA2:79339615:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","DPH6-AS1--FANCI","15:DPH6-AS1:35546473:+:15:FANCI:89312904:+:reg"]
["TCGA_SARC","TCGA-DX-A8BM-01A","SEPT10--LRCH1","2:SEPT10:109585721:-:13:LRCH1:46681741:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","RASAL2--RHBDF1","1:RASAL2:178300118:+:16:RHBDF1:65039:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","PTPN9--SLC12A1","15:PTPN9:75578714:-:15:SLC12A1:48249575:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BM-01A","ATP1B2--SLC37A3","17:ATP1B2:7651630:+:7:SLC37A3:140337349:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BM-01A","TUBGCP2--SORBS1","10:TUBGCP2:133297952:-:10:SORBS1:95384285:-:reg"]
["TCGA_SARC","TCGA-DX-A8BM-01A","NIPBL--SPEF2","5:NIPBL:36976402:+:5:SPEF2:35628460:+:rev"]
["TCGA_SARC","TCGA-DX-A8BN-01A","IL4R--ACMSD","16:IL4R:27314020:+:2:ACMSD:134898341:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BN-01A","CEP89--CEACAM1","19:CEP89:32915337:-:19:CEACAM1:42512479:-:rev"]
["TCGA_SARC","TCGA-DX-A8BN-01A","KIAA0355--SLC7A9","19:KIAA0355:34349153:+:19:SLC7A9:32833323:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BP-01A","ASAP2--ITGB1BP1","2:ASAP2:9297445:+:2:ITGB1BP1:9414256:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BQ-01A","SMURF2--KAT8","17:SMURF2:64593440:-:16:KAT8:31117463:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","OSBPL3--AOC1","7:OSBPL3:24979886:-:7:AOC1:150852115:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BR-01A","EEFSEC--CD96","3:EEFSEC:128264781:+:3:CD96:111567523:+:rev"]
["TCGA_SARC","TCGA-DX-A8BR-01A","FNIP2--EXOC4","4:FNIP2:158769319:+:7:EXOC4:133937891:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","AGAP3--EXOSC9","7:AGAP3:151087072:+:4:EXOSC9:121801827:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","NUP205--GIMAP8","7:NUP205:135607371:+:7:GIMAP8:150474012:+:reg"]
["TCGA_SARC","TCGA-DX-A8BR-01A","DNAAF5--LINC02008","7:DNAAF5:729847:+:3:LINC02008:82416120:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","HECTD1--NSUN3","14:HECTD1:31148721:-:3:NSUN3:94081609:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","SPCS3--SKAP2","4:SPCS3:176324257:+:7:SKAP2:26690362:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BR-01A","OSBPL3--TMEM176A","7:OSBPL3:24979886:-:7:TMEM176A:150804827:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BS-01A","AHDC1--AC004130.1","1:AHDC1:27558706:-:7:AC004130.1:20329513:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BS-01A","CBFA2T2--BCL2L1","20:CBFA2T2:33490301:+:20:BCL2L1:31666086:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BS-01A","DLG1--CBFA2T2","3:DLG1:197282679:-:20:CBFA2T2:33644347:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BS-01A","MYRF--STX5","11:MYRF:61752790:+:11:STX5:62807628:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BS-01A","TRPM7--TEPP","15:TRPM7:50662967:-:16:TEPP:57984303:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BT-01A","NSD2--FBN1","4:NSD2:1904378:+:15:FBN1:48422068:-:fusion"]
["TCGA_SARC","TCGA-DX-A8BT-01A","CENPI--LANCL3","X:CENPI:101148161:+:X:LANCL3:37655688:+:rev"]
["TCGA_SARC","TCGA-DX-A8BT-01A","DOCK1--STK32C","10:DOCK1:126905563:+:10:STK32C:132245955:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","PDLIM5--AC034154.1","4:PDLIM5:94640450:+:4:AC034154.1:97392728:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","PDE10A--ARMC2","6:PDE10A:165543440:-:6:ARMC2:108899694:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","ZNF224--CYP2S1","19:ZNF224:44097888:+:19:CYP2S1:41205958:+:rev"]
["TCGA_SARC","TCGA-DX-A8BU-01A","LDLRAD3--DEPDC7","11:LDLRAD3:36098461:+:11:DEPDC7:33033262:+:rev"]
["TCGA_SARC","TCGA-DX-A8BU-01A","TGFBRAP1--DPP10","2:TGFBRAP1:105296356:-:2:DPP10:114707117:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","GMDS--EXOC2","6:GMDS:1726416:-:6:EXOC2:556564:-:reg"]
["TCGA_SARC","TCGA-DX-A8BU-01A","AFF1--GPRIN3","4:AFF1:86948571:+:4:GPRIN3:89250233:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","SAE1--HAS1","19:SAE1:47131112:+:19:HAS1:51719895:-:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","ATAD1--LRMDA","10:ATAD1:87784470:-:10:LRMDA:76557209:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","TEAD3--ZFAND3","6:TEAD3:35496898:-:6:ZFAND3:38116572:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BU-01A","LSM14A--ZNF221","19:LSM14A:34196763:+:19:ZNF221:43962725:+:reg"]
["TCGA_SARC","TCGA-DX-A8BU-01A","ZNF100--ZNF793-AS1","19:ZNF100:21765694:-:19:ZNF793-AS1:37497592:-:rev"]
["TCGA_SARC","TCGA-DX-A8BV-01A","DCLK1--CLDN10","13:DCLK1:36111869:-:13:CLDN10:95560132:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BV-01A","ARID4B--KLHL12","1:ARID4B:235326914:-:1:KLHL12:202925207:-:reg"]
["TCGA_SARC","TCGA-DX-A8BV-01A","MRRF--NR4A1","9:MRRF:122264938:+:12:NR4A1:52054327:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BV-01A","TTC28--YPEL1","22:TTC28:28629552:-:22:YPEL1:21701218:-:reg"]
["TCGA_SARC","TCGA-DX-A8BX-01A","RPL11--ARMC9","1:RPL11:23694791:+:2:ARMC9:231360754:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BX-01A","TRIP12--ITM2C","2:TRIP12:229858772:-:2:ITM2C:230873417:+:strandcross"]
["TCGA_SARC","TCGA-DX-A8BX-01A","ZNF84--LINC01111","12:ZNF84:133041482:+:8:LINC01111:76475946:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BX-01A","CAB39--RHBDD1","2:CAB39:230760115:+:2:RHBDD1:226995431:+:rev"]
["TCGA_SARC","TCGA-DX-A8BX-01A","ZFPM2--SLC27A2","8:ZFPM2:105318981:+:15:SLC27A2:50197500:+:fusion"]
["TCGA_SARC","TCGA-DX-A8BX-01A","HAUS2--TMPRSS12","15:HAUS2:42548965:+:12:TMPRSS12:50885246:+:fusion"]
["TCGA_SARC","TCGA-DX-AATS-01A","SENP6--ADGRB3","6:SENP6:75602576:+:6:ADGRB3:69354233:+:rev"]
["TCGA_SARC","TCGA-DX-AATS-01A","TRAK2--AP1S3","2:TRAK2:201420417:-:2:AP1S3:223777869:-:rev"]
["TCGA_SARC","TCGA-DX-AATS-01A","NASP--AP4B1","1:NASP:45591270:+:1:AP4B1:113904793:-:strandcross"]
["TCGA_SARC","TCGA-DX-AATS-01A","UBR2--CDKAL1","6:UBR2:42658824:+:6:CDKAL1:20548593:+:rev"]
["TCGA_SARC","TCGA-DX-AATS-01A","GTF2H3--EIF2B1","12:GTF2H3:123645561:+:12:EIF2B1:123624862:-:strandcross"]
["TCGA_SARC","TCGA-DX-AATS-01A","KDM4A--FAF1","1:KDM4A:43698013:+:1:FAF1:50491801:-:strandcross"]
["TCGA_SARC","TCGA-DX-AATS-01A","ZCCHC24--LINC02147","10:ZCCHC24:79432558:-:5:LINC02147:118265354:+:fusion"]
["TCGA_SARC","TCGA-DX-AATS-01A","PTPA--MUSK","9:PTPA:129142552:+:9:MUSK:110747641:+:rev"]
["TCGA_SARC","TCGA-DX-AATS-01A","DYM--OAS3","18:DYM:49460398:-:12:OAS3:112941570:+:fusion"]
["TCGA_SARC","TCGA-DX-AATS-01A","CPS1--PLEKHM3","2:CPS1:210616541:+:2:PLEKHM3:207828496:-:strandcross"]
["TCGA_SARC","TCGA-DX-AATS-01A","FAM120A--SUSD1","9:FAM120A:93527242:+:9:SUSD1:112041960:-:strandcross"]
["TCGA_SARC","TCGA-DX-AATS-01A","DLG1--WDR60","3:DLG1:197081051:-:7:WDR60:158918740:+:fusion"]
["TCGA_SARC","TCGA-DX-AATS-01A","ACSF3--ZNF483","16:ACSF3:89146049:+:9:ZNF483:111576365:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2E-01A","MLLT3--BNC2","9:MLLT3:20620654:-:9:BNC2:16437524:-:reg"]
["TCGA_SARC","TCGA-DX-AB2E-01A","PLEC--JPH1","8:PLEC:143938151:-:8:JPH1:74259503:-:reg"]
["TCGA_SARC","TCGA-DX-AB2E-01A","RIC1--KDM4C","9:RIC1:5656690:+:9:KDM4C:7128066:+:reg"]
["TCGA_SARC","TCGA-DX-AB2E-01A","PVT1--SPATC1","8:PVT1:127794734:+:8:SPATC1:144046627:+:reg"]
["TCGA_SARC","TCGA-DX-AB2E-01A","ANGPT1--TNFRSF11B","8:ANGPT1:107497262:-:8:TNFRSF11B:118933300:-:rev"]
["TCGA_SARC","TCGA-DX-AB2F-01A","MYRFL--AC025575.2","12:MYRFL:69910930:+:12:AC025575.2:71047679:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","LAMA5--AC092598.1","20:LAMA5:62362400:-:2:AC092598.1:188600609:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","AC134511.1--ACVR1","12:AC134511.1:67069050:-:2:ACVR1:157818559:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","NAV3--CDH4","12:NAV3:78159286:+:20:CDH4:61894910:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","MAN1A1--COX7B","6:MAN1A1:119290683:-:X:COX7B:77905184:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","AC090001.1--CPM","12:AC090001.1:95833017:-:12:CPM:68885885:-:reg"]
["TCGA_SARC","TCGA-DX-AB2F-01A","FNDC3B--FGF12","3:FNDC3B:172133546:+:3:FGF12:192360538:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","LEMD3--KCNC2","12:LEMD3:65218619:+:12:KCNC2:75051317:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","MAN1A1--MAGT1","6:MAN1A1:119290683:-:X:MAGT1:77830895:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","AC084032.1--MDM2","12:AC084032.1:70180538:+:12:MDM2:68809208:+:rev"]
["TCGA_SARC","TCGA-DX-AB2F-01A","HIVEP2--MYRFL","6:HIVEP2:142836935:-:12:MYRFL:69926571:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","UST--PGK1","6:UST:148964563:+:X:PGK1:78109867:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","ATP7A--PTPRR","X:ATP7A:77910835:+:12:PTPRR:70639277:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2F-01A","ELK3--PTPRR","12:ELK3:96194705:+:12:PTPRR:70639277:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","R3HDM2--RAP1B","12:R3HDM2:57395749:-:12:RAP1B:68648699:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","UHRF1BP1L--TRHDE","12:UHRF1BP1L:100142592:-:12:TRHDE:72286681:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","ELK3--TSPAN8","12:ELK3:96194705:+:12:TSPAN8:71157787:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2F-01A","ZDHHC14--TSPAN8","6:ZDHHC14:157382266:+:12:TSPAN8:71282819:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2G-01A","HMGA2--AC023509.1","12:HMGA2:65838569:+:12:AC023509.1:53462493:+:rev"]
["TCGA_SARC","TCGA-DX-AB2G-01A","SP1--AC023509.3","12:SP1:53383622:+:12:AC023509.3:53507142:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","R3HDM2--AC112481.1","12:R3HDM2:57395749:-:12:AC112481.1:90810522:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","EPB41L2--AL353596.1","6:EPB41L2:130865536:-:6:AL353596.1:135060215:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","LRP1--ATF1","12:LRP1:57145490:+:12:ATF1:50795909:+:rev"]
["TCGA_SARC","TCGA-DX-AB2G-01A","SP1--ATF7","12:SP1:53383622:+:12:ATF7:53508027:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","TRIO--CDH18","5:TRIO:14420021:+:5:CDH18:19612601:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","MDM2--DIP2B","12:MDM2:68813628:+:12:DIP2B:50660194:+:rev"]
["TCGA_SARC","TCGA-DX-AB2G-01A","OS9--FRS2","12:OS9:57694323:+:12:FRS2:69530865:+:reg"]
["TCGA_SARC","TCGA-DX-AB2G-01A","PPFIA2--KCNMB4","12:PPFIA2:81325777:-:12:KCNMB4:70430485:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","NTN4--LETMD1","12:NTN4:95786939:-:12:LETMD1:51056350:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","LRP1--MCRS1","12:LRP1:57210480:+:12:MCRS1:49559821:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","STAT6--PTPRQ","12:STAT6:57104464:-:12:PTPRQ:80613592:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","CNOT2--R3HDM2","12:CNOT2:70311017:+:12:R3HDM2:57395818:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","DIP2B--R3HDM2","12:DIP2B:50660319:+:12:R3HDM2:57299478:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2G-01A","HMGA2--SLC35E3","12:HMGA2:65838569:+:12:SLC35E3:68759157:+:reg"]
["TCGA_SARC","TCGA-DX-AB2G-01A","CDH18--TERT","5:CDH18:19612434:-:5:TERT:1282624:-:reg"]
["TCGA_SARC","TCGA-DX-AB2G-01A","OS9--YEATS4","12:OS9:57696373:+:12:YEATS4:69370706:+:reg"]
["TCGA_SARC","TCGA-DX-AB2H-01A","ZRANB2-AS2--AC025419.1","1:ZRANB2-AS2:71091704:+:12:AC025419.1:65467134:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2H-01A","ADSS--CAPRIN2","1:ADSS:244415981:-:12:CAPRIN2:30711629:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2H-01A","MSRB3--CNOT2","12:MSRB3:65278865:+:12:CNOT2:70332767:+:reg"]
["TCGA_SARC","TCGA-DX-AB2H-01A","OSBPL8--CNOT2","12:OSBPL8:76487510:-:12:CNOT2:70310895:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2H-01A","ARHGEF25--CPNE8","12:ARHGEF25:57614400:+:12:CPNE8:38654070:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2H-01A","R3HDM2--KIF21A","12:R3HDM2:57395749:-:12:KIF21A:39307729:-:reg"]
["TCGA_SARC","TCGA-DX-AB2H-01A","B3GALNT2--LBR","1:B3GALNT2:235470850:-:1:LBR:225424089:-:reg"]
["TCGA_SARC","TCGA-DX-AB2H-01A","KCNMB4--MUC19","12:KCNMB4:70400336:+:12:MUC19:40493947:+:rev"]
["TCGA_SARC","TCGA-DX-AB2H-01A","LINC02384--MYRFL","12:LINC02384:68442064:-:12:MYRFL:69879028:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2H-01A","THAP2--RAPGEF3","12:THAP2:71664580:+:12:RAPGEF3:47751969:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2H-01A","TRHDE--SFSWAP","12:TRHDE:72575542:+:12:SFSWAP:131764456:+:reg"]
["TCGA_SARC","TCGA-DX-AB2H-01A","SDK2--TMTC2","17:SDK2:73379177:-:12:TMTC2:82857010:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2H-01A","B4GALNT1--TSFM","12:B4GALNT1:57631915:-:12:TSFM:57792986:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2H-01A","SCYL3--TSPAN8","1:SCYL3:169888676:-:12:TSPAN8:71157787:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2H-01A","THAP2--YEATS4","12:THAP2:71664580:+:12:YEATS4:69390147:+:rev"]
["TCGA_SARC","TCGA-DX-AB2O-01A","FSTL5--AC069113.2","4:FSTL5:161587455:-:8:AC069113.2:27908990:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","UBR4--C1QC","1:UBR4:19121189:-:1:C1QC:22647227:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2O-01A","GNPTAB--CCDC60","12:GNPTAB:101830559:-:12:CCDC60:119488759:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2O-01A","INSR--CEP89","19:INSR:7267345:-:19:CEP89:32879378:-:rev"]
["TCGA_SARC","TCGA-DX-AB2O-01A","RPRD1A--CHMP2B","18:RPRD1A:36067254:-:3:CHMP2B:87245714:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","STYX--DAD1","14:STYX:52759754:+:14:DAD1:22565137:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2O-01A","TBC1D14--EVC","4:TBC1D14:6987349:+:4:EVC:5783552:+:rev"]
["TCGA_SARC","TCGA-DX-AB2O-01A","SESTD1--FGGY","2:SESTD1:179264118:-:1:FGGY:59607803:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","DPYSL2--FSTL5","8:DPYSL2:26583983:+:4:FSTL5:161587575:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","HMBOX1--FSTL5","8:HMBOX1:28980156:+:4:FSTL5:161587575:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","KIF5C--GULP1","2:KIF5C:149011683:+:2:GULP1:188593940:+:reg"]
["TCGA_SARC","TCGA-DX-AB2O-01A","DPYSL2--HMBOX1","8:DPYSL2:26583983:+:8:HMBOX1:28980071:+:reg"]
["TCGA_SARC","TCGA-DX-AB2O-01A","SESTD1--LINC02070","2:SESTD1:179264499:-:3:LINC02070:86495791:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","PAK2--LPP","3:PAK2:196740157:+:3:LPP:188760113:+:rev"]
["TCGA_SARC","TCGA-DX-AB2O-01A","RABIF--MKNK1","1:RABIF:202888973:-:1:MKNK1:46594280:-:reg"]
["TCGA_SARC","TCGA-DX-AB2O-01A","TAB2--PAX7","6:TAB2:149318015:+:1:PAX7:18735632:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","TBX15--PRKG1-AS1","1:TBX15:118931619:-:10:PRKG1-AS1:52309537:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","FOXJ3--RCOR1","1:FOXJ3:42265115:-:14:RCOR1:102721007:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2O-01A","VPS37A--WDR78","8:VPS37A:17247369:+:1:WDR78:66871509:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2P-01A","MYL12A--AKAIN1","18:MYL12A:3254050:+:18:AKAIN1:5145755:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2P-01A","FANCM--AL049874.3","14:FANCM:45155459:+:14:AL049874.3:60554235:+:reg"]
["TCGA_SARC","TCGA-DX-AB2P-01A","SEL1L--CHURC1","14:SEL1L:81484225:-:14:CHURC1:64923991:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2P-01A","TOM1L2--COX10-AS1","17:TOM1L2:17893661:-:17:COX10-AS1:14034416:-:reg"]
["TCGA_SARC","TCGA-DX-AB2P-01A","SRR--NDEL1","17:SRR:2304017:+:17:NDEL1:8444260:+:reg"]
["TCGA_SARC","TCGA-DX-AB2P-01A","KAZN--PHGDH","1:KAZN:14180592:+:1:PHGDH:119721170:+:reg"]
["TCGA_SARC","TCGA-DX-AB2P-01A","RUNX1T1--TMEM74","8:RUNX1T1:92005116:-:8:TMEM74:108785137:-:rev"]
["TCGA_SARC","TCGA-DX-AB2P-01A","SULF2--WFDC3","20:SULF2:47736703:-:20:WFDC3:45758431:-:reg"]
["TCGA_SARC","TCGA-DX-AB2Q-01A","NSD3--MIR99AHG","8:NSD3:38318895:-:21:MIR99AHG:16231056:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2Q-01A","DNMBP--RFWD2","10:DNMBP:100009838:-:1:RFWD2:176135086:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2Q-01A","BCAS3--SYTL2","17:BCAS3:61084564:+:11:SYTL2:85714507:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2Q-01A","CELF1--XKR5","11:CELF1:47472191:-:8:XKR5:6812339:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2S-01A","SLC35E3--AC090001.1","12:SLC35E3:68748040:+:12:AC090001.1:95795657:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2S-01A","NIT1--C1orf105","1:NIT1:161120232:+:1:C1orf105:172462178:+:reg"]
["TCGA_SARC","TCGA-DX-AB2S-01A","MCL1--GRIP1","1:MCL1:150578843:-:12:GRIP1:66596927:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2S-01A","TSPAN8--IL26","12:TSPAN8:71277351:-:12:IL26:68202083:-:reg"]
["TCGA_SARC","TCGA-DX-AB2S-01A","NAV3--PPFIA2","12:NAV3:78159286:+:12:PPFIA2:81457866:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2S-01A","DAP3--RPRD2","1:DAP3:155717128:+:1:RPRD2:150464527:+:rev"]
["TCGA_SARC","TCGA-DX-AB2T-01A","SMAD7--AC027097.2","18:SMAD7:48942481:-:18:AC027097.2:57641559:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2T-01A","TIMP2--AC068051.1","17:TIMP2:78924959:-:2:AC068051.1:214436317:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2T-01A","AKIRIN2--GAREM1","6:AKIRIN2:87701450:-:18:GAREM1:32270383:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2T-01A","TP53--HIGD1B","17:TP53:7687377:-:17:HIGD1B:44848060:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2T-01A","CCNC--MICAL1","6:CCNC:99568496:-:6:MICAL1:109446772:-:rev"]
["TCGA_SARC","TCGA-DX-AB2V-01A","MAX--ACTN1","14:MAX:65093708:-:14:ACTN1:68925672:-:rev"]
["TCGA_SARC","TCGA-DX-AB2V-01A","CDK17--ELK3","12:CDK17:96399986:-:12:ELK3:96223565:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2V-01A","WDYHV1--LINC01592","8:WDYHV1:123416932:+:8:LINC01592:68924495:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2V-01A","RGL1--NMNAT2","1:RGL1:183636501:+:1:NMNAT2:183261303:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2W-01A","MYO5A--GALK2","15:MYO5A:52528780:-:15:GALK2:49281987:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2W-01A","NIPBL--L3MBTL4","5:NIPBL:36877178:+:18:L3MBTL4:6171942:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2W-01A","FKBP1A--LINC00687","20:FKBP1A:1392834:-:20:LINC00687:11810439:-:rev"]
["TCGA_SARC","TCGA-DX-AB2X-01A","TRIO--DAP","5:TRIO:14420021:+:5:DAP:10748271:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2X-01A","RPL22--PRDM16","1:RPL22:6197652:-:1:PRDM16:3425581:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","PHLDB1--ACTN1","11:PHLDB1:118621538:+:14:ACTN1:68925672:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","CTIF--AJUBA","18:CTIF:48539312:+:14:AJUBA:22978445:-:fusion"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","PLXNA2--AL122019.1","1:PLXNA2:208210280:-:1:AL122019.1:177393788:-:reg"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","SENP5--FAM193A","3:SENP5:196930900:+:4:FAM193A:2672121:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","USP47--GALNT18","11:USP47:11842224:+:11:GALNT18:11293193:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","JAZF1--IL21-AS1","7:JAZF1:28180463:-:4:IL21-AS1:122619968:+:fusion"]
["TCGA_SARC","TCGA-DX-AB2Z-01A","AP000695.1--LINC00334","21:AP000695.1:36430412:+:21:LINC00334:45258451:+:reg"]
["TCGA_SARC","TCGA-DX-AB32-01A","ARFRP1--LINC01749","20:ARFRP1:63700602:-:20:LINC01749:63079992:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB32-01A","LMAN1--NBEAL1","18:LMAN1:59345919:-:2:NBEAL1:203226123:+:fusion"]
["TCGA_SARC","TCGA-DX-AB35-01A","NAV3--AC011611.2","12:NAV3:77831704:+:12:AC011611.2:75966364:+:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","PPM1H--AC020611.2","12:PPM1H:62934492:-:12:AC020611.2:64042940:-:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","DPP8--AC023905.1","15:DPP8:65497864:-:15:AC023905.1:47360097:-:reg"]
["TCGA_SARC","TCGA-DX-AB35-01A","CNOT2--AC073571.1","12:CNOT2:70278274:+:12:AC073571.1:78056344:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","TMTC2--AC078923.1","12:TMTC2:83061831:+:12:AC078923.1:75631314:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","HMGA2--AC078962.4","12:HMGA2:65838569:+:12:AC078962.4:64599216:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","PRIM1--AC083805.1","12:PRIM1:56734147:-:12:AC083805.1:57870381:-:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","TMTC2--AC090502.1","12:TMTC2:83061831:+:12:AC090502.1:74157884:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","LRRC75A-AS1--AC129102.1","17:LRRC75A-AS1:16441130:+:12:AC129102.1:20361834:-:fusion"]
["TCGA_SARC","TCGA-DX-AB35-01A","AC083805.2--FRS2","12:AC083805.2:57837214:+:12:FRS2:69530865:+:reg"]
["TCGA_SARC","TCGA-DX-AB35-01A","PTPRR--KCNC2","12:PTPRR:70698265:-:12:KCNC2:75051317:-:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","FAM19A2--KRR1","12:FAM19A2:62191259:-:12:KRR1:75508446:-:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","ZDHHC17--MYRFL","12:ZDHHC17:76764329:+:12:MYRFL:69952113:+:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","DPY19L2--NUP107","12:DPY19L2:63666465:-:12:NUP107:68731110:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","AC011611.2--PAWR","12:AC011611.2:75966496:+:12:PAWR:79621207:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","NAV3--PAWR","12:NAV3:77831704:+:12:PAWR:79621207:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","METTL25--PTPRQ","12:METTL25:82403130:+:12:PTPRQ:80632192:+:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","FRS2--PTPRR","12:FRS2:69532056:+:12:PTPRR:70701323:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","SYT1--TBK1","12:SYT1:79047362:+:12:TBK1:64495483:+:rev"]
["TCGA_SARC","TCGA-DX-AB35-01A","TBK1--TMBIM4","12:TBK1:64455957:+:12:TMBIM4:66153448:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB35-01A","CNOT2--TMTC2","12:CNOT2:70311017:+:12:TMTC2:82965024:+:reg"]
["TCGA_SARC","TCGA-DX-AB35-01A","TBK1--TMTC2","12:TBK1:64455957:+:12:TMTC2:83061768:+:reg"]
["TCGA_SARC","TCGA-DX-AB36-01A","LINC01358--AC090673.1","1:LINC01358:59021577:+:12:AC090673.1:65877132:-:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","FRS2--AC133480.1","12:FRS2:69571434:+:12:AC133480.1:72728243:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","FGGY--AL603840.1","1:FGGY:59626049:+:1:AL603840.1:55614921:+:rev"]
["TCGA_SARC","TCGA-DX-AB36-01A","CDK4--ANO5","12:CDK4:57750923:-:11:ANO5:22259519:+:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","FGGY--CC2D1B","1:FGGY:59626049:+:1:CC2D1B:52362746:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","ANO5--CPM","11:ANO5:22276199:+:12:CPM:68859071:-:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","MVK--CPM","12:MVK:109586125:+:12:CPM:68856679:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","ZDHHC2--FGD6","8:ZDHHC2:17156853:+:12:FGD6:95085908:-:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","AC025165.3--IFNG-AS1","12:AC025165.3:57773128:+:12:IFNG-AS1:67995941:+:reg"]
["TCGA_SARC","TCGA-DX-AB36-01A","ELK3--LINC01358","12:ELK3:96223773:+:1:LINC01358:59042172:+:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","HMGA2--LINC02442","12:HMGA2:65838569:+:12:LINC02442:67571305:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","PPP1R12A--METTL25","12:PPP1R12A:79872808:-:12:METTL25:82438718:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","KCTD10--SLC26A10","12:KCTD10:109457630:-:12:SLC26A10:57625998:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","OTOGL--TRPV4","12:OTOGL:80323840:+:12:TRPV4:109814827:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","PCM1--VEZT","8:PCM1:18011827:+:12:VEZT:95266357:+:fusion"]
["TCGA_SARC","TCGA-DX-AB36-01A","NEGR1--ZFYVE9","1:NEGR1:72282319:-:1:ZFYVE9:52216369:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB36-01A","YEATS4--ZFYVE9","12:YEATS4:69360023:+:1:ZFYVE9:52216369:+:fusion"]
["TCGA_SARC","TCGA-DX-AB37-01A","MDM2--AC123567.2","12:MDM2:68828931:+:12:AC123567.2:94168351:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB37-01A","CPSF6--LINC01481","12:CPSF6:69262562:+:12:LINC01481:70242893:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB37-01A","CNOT2--MBD4","12:CNOT2:70319364:+:3:MBD4:129434136:-:fusion"]
["TCGA_SARC","TCGA-DX-AB37-01A","PLXND1--NEK11","3:PLXND1:129585952:-:3:NEK11:131349557:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB37-01A","FGD6--PTPRR","12:FGD6:95089569:-:12:PTPRR:70639277:-:reg"]
["TCGA_SARC","TCGA-DX-AB37-01A","SH2B3--RBM19","12:SH2B3:111418877:+:12:RBM19:113937136:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB37-01A","ST7--TBXAS1","7:ST7:116953691:+:7:TBXAS1:140007091:+:reg"]
["TCGA_SARC","TCGA-DX-AB37-01A","CNOT2--TRMT10C","12:CNOT2:70319364:+:3:TRMT10C:101564770:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","OS9--AC078820.1","12:OS9:57694323:+:12:AC078820.1:75694975:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","DHX40--CEP112","17:DHX40:59570663:+:17:CEP112:66070001:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","CTDSP2--COMMD10","12:CTDSP2:57846372:-:5:COMMD10:116091079:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","FKBP5--CPM","6:FKBP5:35642720:-:12:CPM:68867048:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","TEN1--CYP2J2","17:TEN1:75979511:+:1:CYP2J2:59916100:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","MDM2--FGF18","12:MDM2:68813628:+:5:FGF18:171456539:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","NSD1--FGF18","5:NSD1:177257151:+:5:FGF18:171449147:+:rev"]
["TCGA_SARC","TCGA-DX-AB3A-01A","OSBPL9--FKBP5","1:OSBPL9:51617221:+:6:FKBP5:35642843:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","LLPH-AS1--KIF5A","12:LLPH-AS1:66130975:+:12:KIF5A:57563439:+:rev"]
["TCGA_SARC","TCGA-DX-AB3A-01A","FRS2--LINC02231","12:FRS2:69532056:+:12:LINC02231:64921070:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","CUEDC1--LRP8","17:CUEDC1:57879611:-:1:LRP8:53280715:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","MRS2--LRRIQ1","6:MRS2:24418578:+:12:LRRIQ1:85262915:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","TMEM159--NDUFAB1","16:TMEM159:21161278:+:16:NDUFAB1:23587319:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","ZCCHC11--NFIA","1:ZCCHC11:52552931:-:1:NFIA:61359147:+:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","COMMD10--NUP107","5:COMMD10:116092695:+:12:NUP107:68741813:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","ACP6--PIAS3","1:ACP6:147669830:-:1:PIAS3:145857006:-:reg"]
["TCGA_SARC","TCGA-DX-AB3A-01A","GRB10--PIP4K2C","7:GRB10:50669722:-:12:PIP4K2C:57594025:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","RGL1--POU2F1","1:RGL1:183806485:+:1:POU2F1:167415500:+:rev"]
["TCGA_SARC","TCGA-DX-AB3A-01A","GPRIN1--TM2D1","5:GPRIN1:176609999:-:1:TM2D1:61701025:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","PIAS3--TSPOAP1","1:PIAS3:145850232:-:17:TSPOAP1:58306968:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","TLK2--TSPOAP1","17:TLK2:62586226:+:17:TSPOAP1:58307941:-:strandcross"]
["TCGA_SARC","TCGA-DX-AB3A-01A","CACHD1--USP32","1:CACHD1:64641969:+:17:USP32:60345608:-:fusion"]
["TCGA_SARC","TCGA-DX-AB3A-01A","BCAS3--ZRANB2-AS2","17:BCAS3:60709325:+:1:ZRANB2-AS2:71463331:+:fusion"]
["TCGA_SARC","TCGA-DX-AB3B-01A","SS18--SSX1","18:SS18:26032399:-:X:SSX1:48263782:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ZNF146--ABCA9","19:ZNF146:36215196:+:17:ABCA9:68996014:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","RNF216--ABCB5","7:RNF216:5711761:-:7:ABCB5:20623265:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","AC007161.3--AC004949.1","7:AC007161.3:7801743:+:7:AC004949.1:10452778:-:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","USP6NL--AC044781.1","10:USP6NL:11597631:-:10:AC044781.1:14003526:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","PIK3CA--AC068631.1","3:PIK3CA:179148603:+:3:AC068631.1:186642128:-:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","STK10--AC090502.1","5:STK10:172187887:-:12:AC090502.1:74157884:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","GNS--AC091534.1","12:GNS:64747712:-:12:AC091534.1:75250493:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","PGLS--AC091814.1","19:PGLS:17517389:+:12:AC091814.1:9869330:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","UBXN4--AC136188.1","2:UBXN4:135776351:+:12:AC136188.1:73906940:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CNOT2--ACP6","12:CNOT2:70243480:+:1:ACP6:147659775:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CNOT2--ADH7","12:CNOT2:70243480:+:4:ADH7:99429633:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","AC008440.1--AFF2","19:AC008440.1:53868909:-:X:AFF2:148885889:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TMTC2--AL139161.1","12:TMTC2:82687669:+:1:AL139161.1:235958003:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","VAMP4--AL359551.1","1:VAMP4:171738349:-:1:AL359551.1:238533449:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TNS3--ALG13","7:TNS3:47582051:-:X:ALG13:111682132:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TANC2--ARHGEF12","17:TANC2:63074014:+:11:ARHGEF12:120446403:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","BCL9--BEST3","1:BCL9:147541674:+:12:BEST3:69655813:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","NAV3--BRD4","12:NAV3:78059115:+:19:BRD4:15244762:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ETV1--BTBD9","7:ETV1:13931502:-:6:BTBD9:38256516:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ANO4--C12orf66","12:ANO4:100717547:+:12:C12orf66:64215963:-:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CPSF6--COL9A1","12:CPSF6:69239706:+:6:COL9A1:70217081:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","C12orf66--CPM","12:C12orf66:64215678:-:12:CPM:68932840:-:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","MB21D2--CTLA4","3:MB21D2:192917630:-:2:CTLA4:203870586:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","RCAN2--DOCK2","6:RCAN2:46246748:-:5:DOCK2:169840757:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","NAV3--DOK3","12:NAV3:77831704:+:5:DOK3:177505110:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CLDN12--EBF1","7:CLDN12:90494430:+:5:EBF1:158699142:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","B4GALT3--ERO1B","1:B4GALT3:161173605:-:1:ERO1B:236243495:-:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","JAZF1--EVX1","7:JAZF1:28180463:-:7:EVX1:27245048:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","NAV3--EVX1","12:NAV3:77831704:+:7:EVX1:27244467:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","FXN--FPR2","9:FXN:69065035:+:19:FPR2:51760032:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TMEM255A--FPR2","X:TMEM255A:120304349:-:19:FPR2:51760032:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ZBTB44--FRS2","11:ZBTB44:130314375:-:12:FRS2:69562180:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","DNM2--GDF15","19:DNM2:10718403:+:19:GDF15:18382350:+:reg"]
["TCGA_SARC","TCGA-FX-A2QS-01A","N4BP1--GPATCH2","16:N4BP1:48609775:-:1:GPATCH2:217620499:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CNOT2--GPR50","12:CNOT2:70243480:+:X:GPR50:151179771:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","METTL25--GTPBP10","12:METTL25:82358824:+:7:GTPBP10:90372155:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","DCAF6--HMCN1","1:DCAF6:168045227:+:1:HMCN1:185846026:+:reg"]
["TCGA_SARC","TCGA-FX-A2QS-01A","OTOGL--HMGA2","12:OTOGL:80305695:+:12:HMGA2:65828001:+:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","PPFIA2--HMGA2","12:PPFIA2:81753973:-:12:HMGA2:65828001:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","MDM2--KIAA2012","12:MDM2:68824651:+:2:KIAA2012:202154673:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ADAMTS12--LIFR-AS1","5:ADAMTS12:33881119:-:5:LIFR-AS1:38644350:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","LINC00882--LINC01481","3:LINC00882:107240443:-:12:LINC01481:69904419:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","AC018630.6--LINC01951","12:AC018630.6:11171422:-:5:LINC01951:174976532:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","E2F7--LINC02424","12:E2F7:77033050:-:12:LINC02424:78327376:-:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","FBXW11--LMAN2","5:FBXW11:172006458:-:5:LMAN2:177338605:-:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","NAV3--MIOS","12:NAV3:77325214:+:7:MIOS:7572436:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TMTC2--MYRFL","12:TMTC2:82687669:+:12:MYRFL:69893764:+:rev"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CTNND2--NANS","5:CTNND2:11346372:-:9:NANS:98076918:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","PTPRR--NAV3","12:PTPRR:70684127:-:12:NAV3:77966229:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","PPFIA2--OTOGL","12:PPFIA2:81753973:-:12:OTOGL:80296827:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","CNOT2--PCLO","12:CNOT2:70278274:+:7:PCLO:83156392:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","E2F7--PTPRR","12:E2F7:77033050:-:12:PTPRR:70764778:-:reg"]
["TCGA_SARC","TCGA-FX-A2QS-01A","DAP--SEMA5A","5:DAP:10761014:-:5:SEMA5A:9066646:-:reg"]
["TCGA_SARC","TCGA-FX-A2QS-01A","LINC01951--SKAP2","5:LINC01951:174976449:-:7:SKAP2:26739964:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","NDUFS2--SLC24A2","1:NDUFS2:161202480:+:9:SLC24A2:19597279:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","SEMA5A--SLC6A19","5:SEMA5A:9066421:-:5:SLC6A19:1208746:+:strandcross"]
["TCGA_SARC","TCGA-FX-A2QS-01A","LINC01481--SMC2","12:LINC01481:70242797:-:9:SMC2:104123108:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","BORCS5--SPAG9","12:BORCS5:12361349:+:17:SPAG9:50998617:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","RASSF3--STK10","12:RASSF3:64610743:+:5:STK10:172064812:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","TAX1BP1--SYT1","7:TAX1BP1:27787603:+:12:SYT1:79217503:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","SLIT3--TBC1D30","5:SLIT3:169193479:-:12:TBC1D30:64864668:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","SMC2--TENM1","9:SMC2:104120162:+:X:TENM1:124963817:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","DNM3OS--TMTC2","1:DNM3OS:172142136:-:12:TMTC2:83050904:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","FRS2--TMTC2","12:FRS2:69470530:+:12:TMTC2:82985925:+:reg"]
["TCGA_SARC","TCGA-FX-A2QS-01A","ETS1--UBE2V2","11:ETS1:128521913:-:8:UBE2V2:48043033:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","BBX--VSTM1","3:BBX:107526398:+:19:VSTM1:54042369:-:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","DCAF6--YEATS4","1:DCAF6:168045227:+:12:YEATS4:69390147:+:fusion"]
["TCGA_SARC","TCGA-FX-A2QS-01A","KCNN3--YEATS4","1:KCNN3:154733003:-:12:YEATS4:69362788:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NAV3--AC020637.1","12:NAV3:77325214:+:12:AC020637.1:58805941:+:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CTDSP2--AC024909.1","12:CTDSP2:57827552:-:12:AC024909.1:89051267:-:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AC025165.3--AC073571.1","12:AC025165.3:57773128:+:12:AC073571.1:78056344:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CTDSP2--AC074031.1","12:CTDSP2:57829448:-:12:AC074031.1:80584243:-:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","UACA--AC090502.1","15:UACA:70763330:-:12:AC090502.1:74157884:-:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CACNA1A--AC124784.1","19:CACNA1A:13224667:-:12:AC124784.1:76879888:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CCT2--AC138331.1","12:CCT2:69600004:+:12:AC138331.1:77783263:+:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","HIVEP2--AL050338.2","6:HIVEP2:142761464:-:6:AL050338.2:139856764:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","PTPRS--ANGPTL4","19:PTPRS:5286050:-:19:ANGPTL4:8363774:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NOTCH3--CACNA1A","19:NOTCH3:15197500:-:19:CACNA1A:13371779:-:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AC015522.1--COX6C","8:AC015522.1:83912835:+:8:COX6C:99892052:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CEP57L1--CPM","6:CEP57L1:109095575:+:12:CPM:68932840:-:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NAV3--CSRP2","12:NAV3:77325214:+:12:CSRP2:76866261:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","FRS2--DNM2","12:FRS2:69470530:+:19:DNM2:10793720:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AC107032.2--LIN7A","12:AC107032.2:76562358:+:12:LIN7A:80889369:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","PHIP--LINC00393","6:PHIP:79042843:-:13:LINC00393:73546841:-:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","ATP8B4--LINGO1","15:ATP8B4:50038768:-:15:LINGO1:77615900:-:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CPM--MYRFL","12:CPM:68932678:-:12:MYRFL:69952113:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","ZNF560--OS9","19:ZNF560:9498128:-:12:OS9:57715760:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AC073571.1--OSBPL8","12:AC073571.1:78056185:-:12:OSBPL8:76487618:-:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CCT2--OSBPL8","12:CCT2:69600004:+:12:OSBPL8:76487618:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NAV3--OSBPL8","12:NAV3:77831704:+:12:OSBPL8:76487618:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","VTA1--PPIL4","6:VTA1:142170421:+:6:PPIL4:149505704:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","DNM2--PTH2R","19:DNM2:10718403:+:2:PTH2R:208428201:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","FRS2--PTPRQ","12:FRS2:69470530:+:12:PTPRQ:80678602:+:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","OSBPL8--PTPRQ","12:OSBPL8:76450851:-:12:PTPRQ:80605059:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","SLC44A2--PTPRQ","19:SLC44A2:10602561:+:12:PTPRQ:80588129:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AF117829.1--RGS22","8:AF117829.1:89757045:-:8:RGS22:100047596:-:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NAV3--SYT1","12:NAV3:77325214:+:12:SYT1:78977799:+:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CPSF6--TMTC2","12:CPSF6:69239706:+:12:TMTC2:82857010:+:reg"]
["TCGA_SARC","TCGA-FX-A3NK-01A","PPFIA2--TRHDE","12:PPFIA2:81753973:-:12:TRHDE:72377995:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","AC084033.3--TRMT11","12:AC084033.3:57935470:-:6:TRMT11:126021160:+:fusion"]
["TCGA_SARC","TCGA-FX-A3NK-01A","NAV3--YEATS4","12:NAV3:77325214:+:12:YEATS4:69390147:+:rev"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CTDSP2--ZDHHC17","12:CTDSP2:57829448:-:12:ZDHHC17:76848233:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3NK-01A","OS9--ZNF560","12:OS9:57696373:+:19:ZNF560:9498215:-:fusion"]
["TCGA_SARC","TCGA-FX-A3RE-01A","UBE2E2--AC026167.1","3:UBE2E2:23499740:+:3:AC026167.1:6358901:+:rev"]
["TCGA_SARC","TCGA-FX-A3RE-01A","SND1--IMMP2L","7:SND1:127929329:+:7:IMMP2L:110663721:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3RE-01A","MSI1--KRT78","12:MSI1:120346135:-:12:KRT78:52848621:-:reg"]
["TCGA_SARC","TCGA-FX-A3RE-01A","TRA2B--LINC00879","3:TRA2B:185937825:-:3:LINC00879:95088158:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3RE-01A","ANKHD1--MASP2","5:ANKHD1:140402273:+:1:MASP2:11030250:-:fusion"]
["TCGA_SARC","TCGA-FX-A3RE-01A","PPP2R2A--SMIM19","8:PPP2R2A:26293740:+:8:SMIM19:42546469:+:reg"]
["TCGA_SARC","TCGA-FX-A3RE-01A","DOCK4--SND1","7:DOCK4:111736917:-:7:SND1:128074502:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","SNUPN--AC016134.1","15:SNUPN:75620894:-:15:AC016134.1:41610200:-:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","PLXDC1--AC113554.2","17:PLXDC1:39151362:-:17:AC113554.2:63488648:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","PLXDC1--ACE","17:PLXDC1:39151362:-:17:ACE:63488648:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","FBXL20--BTBD1","17:FBXL20:39343180:-:15:BTBD1:83056545:-:fusion"]
["TCGA_SARC","TCGA-FX-A3TO-01A","FAM222A-AS1--C12orf75","12:FAM222A-AS1:109773297:-:12:C12orf75:105365807:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","CHD2--CCPG1","15:CHD2:92901299:+:15:CCPG1:55385714:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","VPS13C--EHD4","15:VPS13C:61963835:-:15:EHD4:41953940:-:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","PYGO1--FBN1","15:PYGO1:55587835:-:15:FBN1:48499038:-:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","EXOC2--GCNT2","6:EXOC2:532469:-:6:GCNT2:10509087:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","TEAD1--INSC","11:TEAD1:12883125:+:11:INSC:15200824:+:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","CD276--IQCH-AS1","15:CD276:73684460:+:15:IQCH-AS1:67519102:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","RNF213--LINC00511","17:RNF213:80374589:+:17:LINC00511:72323320:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","MYDGF--MAP2K3","19:MYDGF:4659931:-:17:MAP2K3:21298413:+:fusion"]
["TCGA_SARC","TCGA-FX-A3TO-01A","MARK2--NCAM1","11:MARK2:63895633:+:11:NCAM1:113133449:+:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","WSCD1--PIAS1","17:WSCD1:6081085:+:15:PIAS1:68086306:+:fusion"]
["TCGA_SARC","TCGA-FX-A3TO-01A","AC087500.1--PRPF8","17:AC087500.1:5192163:+:17:PRPF8:1651788:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","TIGAR--PTPN6","12:TIGAR:4321303:+:12:PTPN6:6951609:+:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","IQGAP1--RASGRF1","15:IQGAP1:90390873:+:15:RASGRF1:79006434:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","AGAP1--SNX1","2:AGAP1:236049281:+:15:SNX1:64112573:+:fusion"]
["TCGA_SARC","TCGA-FX-A3TO-01A","HS3ST3B1--TMEM92","17:HS3ST3B1:14302072:+:17:TMEM92:50278556:+:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","DNAJC17--TRIP4","15:DNAJC17:40807369:-:15:TRIP4:64454997:+:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","DPP8--TRPM1","15:DPP8:65474209:-:15:TRPM1:31035674:-:reg"]
["TCGA_SARC","TCGA-FX-A3TO-01A","TLN2--VPS13C","15:TLN2:62390685:+:15:VPS13C:61967447:-:strandcross"]
["TCGA_SARC","TCGA-FX-A3TO-01A","PLAUR--WDR45","19:PLAUR:43665316:-:X:WDR45:49078112:-:fusion"]
["TCGA_SARC","TCGA-FX-A48G-01A","GPC3--AC008035.1","X:GPC3:133953050:-:12:AC008035.1:46652390:+:fusion"]
["TCGA_SARC","TCGA-FX-A48G-01A","RFX2--ADK","19:RFX2:6199476:-:10:ADK:74670183:+:fusion"]
["TCGA_SARC","TCGA-FX-A48G-01A","RPTOR--GPC3","17:RPTOR:80545791:+:X:GPC3:133953211:-:fusion"]
["TCGA_SARC","TCGA-FX-A48G-01A","SETD2--RBM6","3:SETD2:47163854:-:3:RBM6:50075201:+:strandcross"]
["TCGA_SARC","TCGA-FX-A76Y-01A","NT5C2--DLEU1","10:NT5C2:103139406:-:13:DLEU1:50104704:+:fusion"]
["TCGA_SARC","TCGA-FX-A76Y-01A","KCNMA1--ESD","10:KCNMA1:77403862:-:13:ESD:46793444:-:fusion"]
["TCGA_SARC","TCGA-FX-A76Y-01A","ACTR10--MKX","14:ACTR10:58200294:+:10:MKX:27675554:-:fusion"]
["TCGA_SARC","TCGA-FX-A76Y-01A","PLXDC2--PDCD11","10:PLXDC2:20177409:+:10:PDCD11:103422988:+:reg"]
["TCGA_SARC","TCGA-FX-A76Y-01A","MYPN--PLXDC2","10:MYPN:68158627:+:10:PLXDC2:20164468:+:rev"]
["TCGA_SARC","TCGA-HB-A2OT-01A","EVC2--AL589642.2","4:EVC2:5697593:-:9:AL589642.2:32643743:-:fusion"]
["TCGA_SARC","TCGA-HB-A2OT-01A","FAM212B--DHRS3","1:FAM212B:111739186:-:1:DHRS3:12580666:-:reg"]
["TCGA_SARC","TCGA-HB-A2OT-01A","IGFBPL1--FAM214B","9:IGFBPL1:38413237:-:9:FAM214B:35108737:-:reg"]
["TCGA_SARC","TCGA-HB-A2OT-01A","RPAIN--STX8","17:RPAIN:5428211:+:17:STX8:9250645:-:strandcross"]
["TCGA_SARC","TCGA-HB-A2OT-01A","CREBBP--WRAP53","16:CREBBP:3810603:-:17:WRAP53:7688648:+:fusion"]
["TCGA_SARC","TCGA-HB-A3L4-01A","DENND1A--CDK5RAP2","9:DENND1A:123757703:-:9:CDK5RAP2:120572041:-:reg"]
["TCGA_SARC","TCGA-HB-A3L4-01A","FBXW2--NXNL2","9:FBXW2:120787769:-:9:NXNL2:88544379:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3L4-01A","ADCY9--SPG20","16:ADCY9:3983232:-:13:SPG20:36329517:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SCAF8--AC025262.1","6:SCAF8:154822409:+:12:AC025262.1:64779071:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","RNASEH2B--AGXT2","13:RNASEH2B:50910140:+:5:AGXT2:35014119:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","ZNF732--AL138733.1","4:ZNF732:295438:-:6:AL138733.1:151088380:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","OPRM1--AL356124.1","6:OPRM1:154039834:+:6:AL356124.1:129540542:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","GRIK2--AL357060.2","6:GRIK2:101676804:+:6:AL357060.2:137730597:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","ASCC3--AL591397.1","6:ASCC3:100540163:-:6:AL591397.1:137951141:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","YEATS4--ARFGEF3","12:YEATS4:69360023:+:6:ARFGEF3:138291733:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","AKAP12--ASCC3","6:AKAP12:151240724:+:6:ASCC3:100540387:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","AL513550.1--C12orf56","6:AL513550.1:99425898:+:12:C12orf56:64312752:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","PLP1--CBARP","X:PLP1:103776999:+:19:CBARP:1236121:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","MAML3--CCDC170","4:MAML3:139889357:-:6:CCDC170:151548304:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","AL139260.1--DAB1","1:AL139260.1:38860239:+:1:DAB1:57291166:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","MEX3D--DOCK11","19:MEX3D:1567464:-:X:DOCK11:118542725:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","USP15--DPY19L2","12:USP15:62349307:+:12:DPY19L2:63582525:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SYNE1--ESR1","6:SYNE1:152244537:-:6:ESR1:152094385:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","TXNRD2--EVX1","22:TXNRD2:19931030:-:7:EVX1:27245048:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","LAMA2--GRIK2","6:LAMA2:129192853:+:6:GRIK2:101676623:+:rev"]
["TCGA_SARC","TCGA-HB-A3YV-01A","METTL7A--GRIK2","12:METTL7A:50925536:+:6:GRIK2:101676623:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SCAF8--IL20RA","6:SCAF8:154792976:+:6:IL20RA:137017103:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","PDP1--INA","8:PDP1:93917079:+:10:INA:103287035:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","CPSF6--LAMA2","12:CPSF6:69239706:+:6:LAMA2:129177706:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","ALX4--LMX1A","11:ALX4:44309597:-:1:LMX1A:165213813:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","RGS17--MCHR2-AS1","6:RGS17:153024262:-:6:MCHR2-AS1:100076242:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","RMND1--MTHFD1L","6:RMND1:151452016:-:6:MTHFD1L:150898860:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","C12orf66--NXF3","12:C12orf66:64215678:-:X:NXF3:103084883:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","WDFY3--PLAGL1","4:WDFY3:84966209:-:6:PLAGL1:143968978:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","CNKSR3--PLP1","6:CNKSR3:154510063:-:X:PLP1:103776853:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","TBC1D30--PLP1","12:TBC1D30:64828509:+:X:PLP1:103776853:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SYT1--PPFIA2","12:SYT1:79047362:+:12:PPFIA2:81457866:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","METTL24--REPS1","6:METTL24:110357955:-:6:REPS1:138930098:-:rev"]
["TCGA_SARC","TCGA-HB-A3YV-01A","GRIK2--RNF217","6:GRIK2:101928632:+:6:RNF217:125045211:+:reg"]
["TCGA_SARC","TCGA-HB-A3YV-01A","PLP1--SCAF8","X:PLP1:103776999:+:6:SCAF8:154773989:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","LAMA2--SLC11A2","6:LAMA2:129192853:+:12:SLC11A2:51010766:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","LINC01088--SNCA","4:LINC01088:79086262:+:4:SNCA:89729277:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","ZDHHC17--SYT1","12:ZDHHC17:76805439:+:12:SYT1:78955462:+:reg"]
["TCGA_SARC","TCGA-HB-A3YV-01A","FRS2--TBC1D30","12:FRS2:69470530:+:12:TBC1D30:64832119:+:rev"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SCAF8--TBC1D30","6:SCAF8:154822409:+:12:TBC1D30:64785881:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","VMP1--TK1","17:VMP1:59707748:+:17:TK1:78175618:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","GNA11--TMCO3","19:GNA11:3094787:+:13:TMCO3:113520616:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","GRIP1--TMEM5","12:GRIP1:66596847:-:12:TMEM5:63805234:+:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","CCT2--UTRN","12:CCT2:69597275:+:6:UTRN:144403123:+:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","SCAF8--UTRN","6:SCAF8:154742018:+:6:UTRN:144499257:+:rev"]
["TCGA_SARC","TCGA-HB-A3YV-01A","GRIK2--WASF1","6:GRIK2:101686353:+:6:WASF1:110127629:-:strandcross"]
["TCGA_SARC","TCGA-HB-A3YV-01A","UTRN--WIF1","6:UTRN:144488834:+:12:WIF1:65077854:-:fusion"]
["TCGA_SARC","TCGA-HB-A3YV-01A","UTRN--Z86062.2","6:UTRN:144291907:+:6:Z86062.2:100427118:+:rev"]
["TCGA_SARC","TCGA-HB-A43Z-01A","TBCD--HLCS","17:TBCD:82930643:+:21:HLCS:36767285:-:fusion"]
["TCGA_SARC","TCGA-HB-A43Z-01A","SLC8A1--SRSF7","2:SLC8A1:40428473:-:2:SRSF7:38750194:-:reg"]
["TCGA_SARC","TCGA-HS-A5N8-01A","ZFAND6--C15orf59-AS1","15:ZFAND6:80059809:+:15:C15orf59-AS1:73769470:+:rev"]
["TCGA_SARC","TCGA-HS-A5N8-01A","KAT6B--KANSL1","10:KAT6B:74843478:+:17:KANSL1:46034285:-:fusion"]
["TCGA_SARC","TCGA-HS-A5N8-01A","FAM168A--SYT12","11:FAM168A:73411394:-:11:SYT12:67039811:+:strandcross"]
["TCGA_SARC","TCGA-HS-A5N9-01A","XPC--DAG1","3:XPC:14178466:-:3:DAG1:49510419:+:strandcross"]
["TCGA_SARC","TCGA-HS-A5N9-01A","SLC25A13--GTPBP10","7:SLC25A13:96321942:-:7:GTPBP10:90352816:+:strandcross"]
["TCGA_SARC","TCGA-HS-A5N9-01A","SVIL--KIAA1217","10:SVIL:29686553:-:10:KIAA1217:24219626:+:strandcross"]
["TCGA_SARC","TCGA-HS-A5N9-01A","DAG1--KPNA6","3:DAG1:49470433:+:1:KPNA6:32154588:+:fusion"]
["TCGA_SARC","TCGA-HS-A5N9-01A","AC008770.3--RAD23A","19:AC008770.3:11925273:+:19:RAD23A:12952689:+:reg"]
["TCGA_SARC","TCGA-HS-A5N9-01A","ZNF700--RAD23A","19:ZNF700:11925273:+:19:RAD23A:12952689:+:reg"]
["TCGA_SARC","TCGA-HS-A5N9-01A","KPNA6--TRAIP","1:KPNA6:32108134:+:3:TRAIP:49848200:-:fusion"]
["TCGA_SARC","TCGA-HS-A5NA-01A","NBEA--FNDC3A","13:NBEA:35232619:+:13:FNDC3A:49114655:+:reg"]
["TCGA_SARC","TCGA-HS-A5NA-01A","PPM1G--LPAR1","2:PPM1G:27387089:-:9:LPAR1:110973558:-:fusion"]
["TCGA_SARC","TCGA-IE-A3OV-01A","FOXK2--ABR","17:FOXK2:82587272:+:17:ABR:1083627:-:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","PCTP--BRIP1","17:PCTP:55751244:+:17:BRIP1:61784424:-:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","TIMM22--C17orf51","17:TIMM22:999584:+:17:C17orf51:21535538:-:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","FXR2--CAB39L","17:FXR2:7602909:-:13:CAB39L:49382941:-:fusion"]
["TCGA_SARC","TCGA-IE-A3OV-01A","ATP11B--CCDC39","3:ATP11B:182859359:+:3:CCDC39:180782124:-:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","ACACA--CCL5","17:ACACA:37121355:-:17:CCL5:35872464:-:reg"]
["TCGA_SARC","TCGA-IE-A3OV-01A","SMAD7--CTIF","18:SMAD7:48948384:-:18:CTIF:48636614:+:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","TP53--FOXK2","17:TP53:7687377:-:17:FOXK2:82585904:+:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","WDSUB1--FYTTD1","2:WDSUB1:159275546:-:3:FYTTD1:197756426:+:fusion"]
["TCGA_SARC","TCGA-IE-A3OV-01A","MEGF8--ITPKC","19:MEGF8:42371482:+:19:ITPKC:40725340:+:rev"]
["TCGA_SARC","TCGA-IE-A3OV-01A","RPS6KA2--KIFC1","6:RPS6KA2:166626921:-:6:KIFC1:33398029:+:strandcross"]
["TCGA_SARC","TCGA-IE-A3OV-01A","WDR70--LINC01194","5:WDR70:37396570:+:5:LINC01194:12595697:+:rev"]
["TCGA_SARC","TCGA-IE-A3OV-01A","KLHL24--MARCH7","3:KLHL24:183651276:+:2:MARCH7:159762880:+:fusion"]
["TCGA_SARC","TCGA-IE-A3OV-01A","FOXK2--SPECC1","17:FOXK2:82571870:+:17:SPECC1:20057677:+:rev"]
["TCGA_SARC","TCGA-IE-A4EH-01A","XPO4--PCAT19","13:XPO4:20799165:-:19:PCAT19:41495427:-:fusion"]
["TCGA_SARC","TCGA-IE-A4EH-01A","NAPA--PLAC1","19:NAPA:47514843:-:X:PLAC1:134566740:-:fusion"]
["TCGA_SARC","TCGA-IE-A4EJ-01A","XYLT1--ABR","16:XYLT1:17258988:-:17:ABR:1125367:-:fusion"]
["TCGA_SARC","TCGA-IE-A4EJ-01A","XYLT1--AC144836.1","16:XYLT1:17258988:-:17:AC144836.1:1242191:-:fusion"]
["TCGA_SARC","TCGA-IE-A4EJ-01A","DCUN1D4--IKZF1","4:DCUN1D4:51891851:+:7:IKZF1:50376533:+:fusion"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","DUSP22--BEND6","6:DUSP22:311962:+:6:BEND6:56981711:+:reg"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","TAF2--CLVS1","8:TAF2:119831677:-:8:CLVS1:61499455:+:strandcross"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","COX14--FBN1","12:COX14:50112301:+:15:FBN1:48470756:-:fusion"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","METTL16--FXR2","17:METTL16:2502204:-:17:FXR2:7606149:-:rev"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","VEGFA--NRDC","6:VEGFA:43771312:+:1:NRDC:51840514:-:fusion"]
["TCGA_SARC","TCGA-IE-A6BZ-01A","LDLR--TNPO2","19:LDLR:11123344:+:19:TNPO2:12706795:-:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","PTPRD--AL357060.2","9:PTPRD:8857638:-:6:AL357060.2:137730597:-:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","CDC42BPB--AL365295.1","14:CDC42BPB:102999565:-:14:AL365295.1:53525811:+:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","RAB3IP--AVIL","12:RAB3IP:69795344:+:12:AVIL:57814226:-:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","DSE--CPM","6:DSE:116258967:+:12:CPM:68842329:-:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","PTPRQ--FAM240B","12:PTPRQ:80445717:+:9:FAM240B:38704002:-:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","CTDSP2--HMGA2","12:CTDSP2:57846372:-:12:HMGA2:65951383:+:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","UTRN--HMGA2","6:UTRN:144700243:+:12:HMGA2:65838519:+:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","BAZ1B--LINC00457","7:BAZ1B:73492800:-:13:LINC00457:34435644:-:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","STXBP5--LINC01277","6:STXBP5:147206068:+:6:LINC01277:142986130:-:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","FNIP1--NREP-AS1","5:FNIP1:131670463:-:5:NREP-AS1:111940037:+:strandcross"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","NHSL1--PTPRD","6:NHSL1:138447001:-:9:PTPRD:9018735:-:fusion"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","EPB41L2--PTPRK","6:EPB41L2:130955105:-:6:PTPRK:128009268:-:reg"]
["TCGA_SARC","TCGA-IF-A3RQ-01A","CNOT2--ZDHHC17","12:CNOT2:70278274:+:12:ZDHHC17:76842025:+:reg"]
["TCGA_SARC","TCGA-IF-A4AK-01A","LSS--EIF4ENIF1","21:LSS:46205836:-:22:EIF4ENIF1:31463967:-:fusion"]
["TCGA_SARC","TCGA-IF-A4AK-01A","DOCK7--NMT2","1:DOCK7:62688227:-:10:NMT2:15141557:-:fusion"]
["TCGA_SARC","TCGA-IF-A4AK-01A","GRTP1--SPATC1L","13:GRTP1:113355323:-:21:SPATC1L:46162067:-:fusion"]
["TCGA_SARC","TCGA-IS-A3K6-01A","XPR1--AL390718.1","1:XPR1:180682411:+:1:AL390718.1:180117315:-:strandcross"]
["TCGA_SARC","TCGA-IS-A3K6-01A","ATRX--MIR325HG","X:ATRX:77785982:-:X:MIR325HG:76658308:-:reg"]
["TCGA_SARC","TCGA-IS-A3K7-01A","TTN--CHRNA1","2:TTN:178729288:-:2:CHRNA1:174784869:-:reg"]
["TCGA_SARC","TCGA-IS-A3K7-01A","KDM2B--CORO1C","12:KDM2B:121439857:-:12:CORO1C:108701323:-:reg"]
["TCGA_SARC","TCGA-IS-A3K7-01A","FUS--MMP2-AS1","16:FUS:31180227:+:16:MMP2-AS1:55446948:-:strandcross"]
["TCGA_SARC","TCGA-IS-A3K7-01A","MREG--SPAG17","2:MREG:216013233:-:1:SPAG17:117954049:-:fusion"]
["TCGA_SARC","TCGA-IS-A3K7-01A","AC145422.1--TCTN1","12:AC145422.1:121581263:+:12:TCTN1:110647196:+:rev"]
["TCGA_SARC","TCGA-IS-A3K7-01A","RANBP10--USP10","16:RANBP10:67772034:-:16:USP10:84716195:+:strandcross"]
["TCGA_SARC","TCGA-IS-A3KA-01A","AC139887.2--C2orf82","4:AC139887.2:781772:-:2:C2orf82:232875940:+:fusion"]
["TCGA_SARC","TCGA-IW-A3M4-01A","USP20--TVP23C-CDRT4","9:USP20:129858112:+:17:TVP23C-CDRT4:15440285:-:fusion"]
["TCGA_SARC","TCGA-IW-A3M6-01A","ACTG2--ALK","2:ACTG2:73901437:+:2:ALK:29227074:-:strandcross"]
["TCGA_SARC","TCGA-IW-A3M6-01A","NUP205--SERPINA12","7:NUP205:135597418:+:14:SERPINA12:94498430:-:fusion"]
["TCGA_SARC","TCGA-JV-A5VE-01A","ANK2--AC139718.2","4:ANK2:113360897:+:4:AC139718.2:111837454:+:rev"]
["TCGA_SARC","TCGA-JV-A5VE-01A","AEBP2--LMO3","12:AEBP2:19493986:+:12:LMO3:16600868:-:strandcross"]
["TCGA_SARC","TCGA-JV-A5VE-01A","GLOD4--NPLOC4","17:GLOD4:769869:-:17:NPLOC4:81622278:-:rev"]
["TCGA_SARC","TCGA-JV-A5VF-01A","EED--AL451062.1","11:EED:86245343:+:1:AL451062.1:43720551:-:fusion"]
["TCGA_SARC","TCGA-JV-A75J-01A","SLC7A1--AKNA","13:SLC7A1:29595416:-:9:AKNA:114381446:-:fusion"]
["TCGA_SARC","TCGA-JV-A75J-01A","FSCN1--CLIC2","7:FSCN1:5593768:+:X:CLIC2:155299145:-:fusion"]
["TCGA_SARC","TCGA-JV-A75J-01A","NSMCE2--COL22A1","8:NSMCE2:125182256:+:8:COL22A1:138844158:-:strandcross"]
["TCGA_SARC","TCGA-JV-A75J-01A","PANK1--CRYBB1","10:PANK1:89644600:-:22:CRYBB1:26612190:-:fusion"]
["TCGA_SARC","TCGA-JV-A75J-01A","GNA12--CUL1","7:GNA12:2794928:-:7:CUL1:148729962:+:strandcross"]
["TCGA_SARC","TCGA-JV-A75J-01A","NSMCE2--EXT1","8:NSMCE2:125151277:+:8:EXT1:117804893:-:strandcross"]
["TCGA_SARC","TCGA-JV-A75J-01A","BTAF1--HOGA1","10:BTAF1:91953873:+:10:HOGA1:97598775:+:reg"]
["TCGA_SARC","TCGA-JV-A75J-01A","PCNT--NSMCE2","21:PCNT:46351540:+:8:NSMCE2:125151171:+:fusion"]
["TCGA_SARC","TCGA-JV-A75J-01A","EIF2AK1--PHF14","7:EIF2AK1:6054546:-:7:PHF14:11051612:+:strandcross"]
["TCGA_SARC","TCGA-JV-A75J-01A","NUBP2--RHBDL1","16:NUBP2:1783036:+:16:RHBDL1:676971:+:rev"]
["TCGA_SARC","TCGA-JV-A75J-01A","NF1--RPTOR","17:NF1:31095369:+:17:RPTOR:80625691:+:reg"]
["TCGA_SARC","TCGA-JV-A75J-01A","NOM1--UVRAG","7:NOM1:156950724:+:11:UVRAG:76065710:+:fusion"]
["TCGA_SARC","TCGA-K1-A3PN-02A","CALD1--EXOC4","7:CALD1:134965386:+:7:EXOC4:133475328:+:rev"]
["TCGA_SARC","TCGA-K1-A3PO-01A","SCMH1--CASP9","1:SCMH1:41242059:-:1:CASP9:15518395:-:reg"]
["TCGA_SARC","TCGA-K1-A3PO-01A","EEF2--SMARCA4","19:EEF2:3982807:-:19:SMARCA4:11041298:+:strandcross"]
["TCGA_SARC","TCGA-K1-A3PO-01A","DOT1L--SSBP3","19:DOT1L:2164265:+:1:SSBP3:54228826:-:fusion"]
["TCGA_SARC","TCGA-K1-A3PO-01A","RBM6--TTC7A","3:RBM6:50068764:+:2:TTC7A:47060769:+:fusion"]
["TCGA_SARC","TCGA-K1-A42X-01A","SMAD3--AAGAB","15:SMAD3:67066360:+:15:AAGAB:67202898:-:strandcross"]
["TCGA_SARC","TCGA-K1-A42X-01A","THOC1--GLI3","18:THOC1:223440:-:7:GLI3:42223295:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-01A","UHRF1BP1L--LINC02453","12:UHRF1BP1L:100142592:-:12:LINC02453:98493484:-:reg"]
["TCGA_SARC","TCGA-K1-A42X-01A","LATS2--MYLK","13:LATS2:21061346:-:3:MYLK:123667187:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-01A","PDLIM1--PLCE1","10:PDLIM1:95247215:-:10:PLCE1:94227306:+:strandcross"]
["TCGA_SARC","TCGA-K1-A42X-01A","ZNF236--QRSL1","18:ZNF236:76851939:+:6:QRSL1:106640349:+:fusion"]
["TCGA_SARC","TCGA-K1-A42X-01A","TOPBP1--SPDEF","3:TOPBP1:133623091:-:6:SPDEF:34544484:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-01A","ATRN--UQCRB","20:ATRN:3560905:+:8:UQCRB:96233227:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-02A","SMAD3--AAGAB","15:SMAD3:67066360:+:15:AAGAB:67202898:-:strandcross"]
["TCGA_SARC","TCGA-K1-A42X-02A","LATS2--MYLK","13:LATS2:21061346:-:3:MYLK:123667187:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-02A","PDLIM1--PLCE1","10:PDLIM1:95247215:-:10:PLCE1:94227306:+:strandcross"]
["TCGA_SARC","TCGA-K1-A42X-02A","ZNF236--QRSL1","18:ZNF236:76851939:+:6:QRSL1:106640349:+:fusion"]
["TCGA_SARC","TCGA-K1-A42X-02A","TOPBP1--SPDEF","3:TOPBP1:133623091:-:6:SPDEF:34544484:-:fusion"]
["TCGA_SARC","TCGA-K1-A42X-02A","ATRN--UQCRB","20:ATRN:3560905:+:8:UQCRB:96233227:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RT-01A","CORO6--ACTG1","17:CORO6:29617500:-:17:ACTG1:81511626:-:rev"]
["TCGA_SARC","TCGA-K1-A6RT-01A","RALGPS1--NUP210L","9:RALGPS1:126915012:+:1:NUP210L:153995180:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RT-01A","VPS45--PSMB4","1:VPS45:150072226:+:1:PSMB4:151401817:+:reg"]
["TCGA_SARC","TCGA-K1-A6RU-01A","ZER1--AL354861.2","9:ZER1:128771581:-:9:AL354861.2:95715404:+:strandcross"]
["TCGA_SARC","TCGA-K1-A6RU-01A","NUP188--APBA1","9:NUP188:128952846:+:9:APBA1:69517279:-:strandcross"]
["TCGA_SARC","TCGA-K1-A6RU-01A","GPBP1--DERL2","5:GPBP1:57261282:+:17:DERL2:5477999:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RU-01A","TP53--ELL","17:TP53:7687377:-:19:ELL:18450975:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RU-01A","FAM207A--FER","21:FAM207A:44960168:+:5:FER:109100396:+:fusion"]
["TCGA_SARC","TCGA-K1-A6RU-01A","SVEP1--GAS1RR","9:SVEP1:110579013:-:9:GAS1RR:86950867:+:strandcross"]
["TCGA_SARC","TCGA-K1-A6RU-01A","FAM102A--RAD23B","9:FAM102A:127979992:-:9:RAD23B:107318752:+:strandcross"]
["TCGA_SARC","TCGA-K1-A6RU-01A","CORO1C--RBFOX1","12:CORO1C:108701124:-:16:RBFOX1:7518147:+:fusion"]
["TCGA_SARC","TCGA-K1-A6RU-01A","AKT2--SMIM17","19:AKT2:40256926:-:19:SMIM17:56645568:+:strandcross"]
["TCGA_SARC","TCGA-K1-A6RU-01A","APBA1--SUSD1","9:APBA1:69456247:-:9:SUSD1:112041960:-:rev"]
["TCGA_SARC","TCGA-K1-A6RU-01A","SVEP1--TJP2","9:SVEP1:110512926:-:9:TJP2:69249375:+:strandcross"]
["TCGA_SARC","TCGA-K1-A6RV-01A","IL1R1--AC021006.2","2:IL1R1:102104872:+:11:AC021006.2:41528209:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RV-01A","DIP2C--ORC4","10:DIP2C:689494:-:2:ORC4:147975975:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RV-01A","SMARCB1--SBF2","22:SMARCB1:23825415:+:11:SBF2:10193987:-:fusion"]
["TCGA_SARC","TCGA-K1-A6RV-01A","GALNT13--SMYD1","2:GALNT13:154140505:+:2:SMYD1:88084316:+:rev"]
["TCGA_SARC","TCGA-K1-A6RV-01A","NTM--SORL1","11:NTM:131911648:+:11:SORL1:121605113:+:rev"]
["TCGA_SARC","TCGA-KD-A5QS-01A","SUCLG2--AC025566.1","3:SUCLG2:67609455:-:3:AC025566.1:148226377:+:strandcross"]
["TCGA_SARC","TCGA-KD-A5QS-01A","WASHC4--PRDM4","12:WASHC4:105121204:+:12:PRDM4:107754109:-:strandcross"]
["TCGA_SARC","TCGA-KD-A5QS-01A","CHSY3--RBM22","5:CHSY3:129908360:+:5:RBM22:150698631:-:strandcross"]
["TCGA_SARC","TCGA-KD-A5QS-01A","AL359736.1--SUCLA2","13:AL359736.1:23983933:+:13:SUCLA2:47973392:-:strandcross"]
["TCGA_SARC","TCGA-KD-A5QS-01A","FAM118A--VAPB","22:FAM118A:45310183:+:20:VAPB:58434602:+:fusion"]
["TCGA_SARC","TCGA-KD-A5QT-01A","ZNF208--AC010127.1","19:ZNF208:22010792:-:2:AC010127.1:166294565:+:fusion"]
["TCGA_SARC","TCGA-KD-A5QT-01A","YPEL1--DIAPH3","22:YPEL1:21735615:-:13:DIAPH3:59666846:-:fusion"]
["TCGA_SARC","TCGA-KD-A5QT-01A","HS6ST3--FAM155A","13:HS6ST3:96091569:+:13:FAM155A:107170786:-:strandcross"]
["TCGA_SARC","TCGA-KD-A5QT-01A","ARHGAP44--ZSWIM7","17:ARHGAP44:12919831:+:17:ZSWIM7:15981144:-:strandcross"]
["TCGA_SARC","TCGA-KD-A5QU-01A","TP53--DUS3L","17:TP53:7687377:-:19:DUS3L:5788176:-:fusion"]
["TCGA_SARC","TCGA-KD-A5QU-01A","DLG4--KRT8","17:DLG4:7217118:-:12:KRT8:52902072:-:fusion"]
["TCGA_SARC","TCGA-KD-A5QU-01A","PDE4D--NOA1","5:PDE4D:59180595:-:4:NOA1:56974022:-:fusion"]
["TCGA_SARC","TCGA-KF-A41W-01A","ATP11A--ADPRHL1","13:ATP11A:112785257:+:13:ADPRHL1:113433867:-:strandcross"]
["TCGA_SARC","TCGA-KF-A41W-01A","DCUN1D2--ATP11A","13:DCUN1D2:113480575:-:13:ATP11A:112785135:+:strandcross"]
["TCGA_SARC","TCGA-KF-A41W-01A","TMCO3--GRTP1","13:TMCO3:113539507:+:13:GRTP1:113326091:-:strandcross"]
["TCGA_SARC","TCGA-KF-A41W-01A","SLC39A14--IL4I1","8:SLC39A14:22367408:+:19:IL4I1:49896053:-:fusion"]
["TCGA_SARC","TCGA-KF-A41W-01A","TMCO3--PRKCZ","13:TMCO3:113539507:+:1:PRKCZ:2169518:+:fusion"]
["TCGA_SARC","TCGA-KF-A41W-01A","TSHZ1--RNASEH2B","18:TSHZ1:75211916:+:13:RNASEH2B:50927407:+:fusion"]
["TCGA_SARC","TCGA-KF-A41W-01A","DCUN1D2--TFDP1","13:DCUN1D2:113474124:-:13:TFDP1:113635977:+:strandcross"]
["TCGA_SARC","TCGA-LI-A67I-01A","AUTS2--ACTR1A","7:AUTS2:69899498:+:10:ACTR1A:102490613:-:fusion"]
["TCGA_SARC","TCGA-LI-A9QH-01A","TIPIN--ATP8B4","15:TIPIN:66356639:-:15:ATP8B4:49934182:-:reg"]
["TCGA_SARC","TCGA-LI-A9QH-01A","HIF1A--C14orf37","14:HIF1A:61695839:+:14:C14orf37:58139414:-:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","PDZRN3--CACNA2D3","3:PDZRN3:73602354:-:3:CACNA2D3:54386715:+:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","SETD2--CCRL2","3:SETD2:47097955:-:3:CCRL2:46407389:+:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","RB1--DIAPH3","13:RB1:48307406:+:13:DIAPH3:60132989:-:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","ESD--FAM124A","13:ESD:46793397:-:13:FAM124A:51251468:+:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","ZNF507--FXYD1","19:ZNF507:32360618:+:19:FXYD1:35140076:+:reg"]
["TCGA_SARC","TCGA-LI-A9QH-01A","EPN2--PIBF1","17:EPN2:19237531:+:13:PIBF1:72893784:+:fusion"]
["TCGA_SARC","TCGA-LI-A9QH-01A","ADAMTS17--SLC12A1","15:ADAMTS17:100330889:-:15:SLC12A1:48255811:+:strandcross"]
["TCGA_SARC","TCGA-LI-A9QH-01A","KDELC2--TAF1D","11:KDELC2:108498165:-:11:TAF1D:93742898:-:reg"]
["TCGA_SARC","TCGA-LI-A9QH-01A","FBN1--URI1","15:FBN1:48644606:-:19:URI1:29971193:+:fusion"]
["TCGA_SARC","TCGA-MB-A5Y8-01A","ZNF362--AL603840.1","1:ZNF362:33276594:+:1:AL603840.1:55832264:+:reg"]
["TCGA_SARC","TCGA-MB-A5Y9-01A","DYNC1H1--MARCH11","14:DYNC1H1:102028141:+:5:MARCH11:16067793:-:fusion"]
["TCGA_SARC","TCGA-MB-A5YA-01A","LPAR6--RNASEH2B","13:LPAR6:48412421:-:13:RNASEH2B:50927407:+:strandcross"]
["TCGA_SARC","TCGA-MB-A8JK-01A","NFIX--SEMA3A","19:NFIX:13025552:+:7:SEMA3A:83985477:-:fusion"]
["TCGA_SARC","TCGA-MB-A8JK-01A","NEO1--ZFAT","15:NEO1:73136027:+:8:ZFAT:134657737:-:fusion"]
["TCGA_SARC","TCGA-MB-A8JL-01A","TMEM117--AC090673.1","12:TMEM117:43944342:+:12:AC090673.1:65866954:-:strandcross"]
["TCGA_SARC","TCGA-MB-A8JL-01A","LRIG3--ATP23","12:LRIG3:58913982:-:12:ATP23:57945628:+:strandcross"]
["TCGA_SARC","TCGA-MB-A8JL-01A","PPM1H--PDZRN4","12:PPM1H:62693936:-:12:PDZRN4:41506456:+:strandcross"]
["TCGA_SARC","TCGA-MB-A8JL-01A","KANSL1--PYY","17:KANSL1:46170855:-:17:PYY:43966532:-:reg"]
["TCGA_SARC","TCGA-MB-A8JL-01A","ADAL--TERB2","15:ADAL:43345980:+:15:TERB2:44973867:+:reg"]
["TCGA_SARC","TCGA-MJ-A68H-01A","SIN3B--C19orf57","19:SIN3B:16841968:+:19:C19orf57:13886055:-:strandcross"]
["TCGA_SARC","TCGA-MJ-A68H-01A","CDH2--EPB41L3","18:CDH2:28147673:-:18:EPB41L3:5489194:-:reg"]
["TCGA_SARC","TCGA-N1-A6IA-01A","TNPO1--AL139120.1","5:TNPO1:72861914:+:10:AL139120.1:112672768:-:fusion"]
["TCGA_SARC","TCGA-N1-A6IA-01A","ZNF366--AL139120.1","5:ZNF366:72460165:-:10:AL139120.1:112672768:-:fusion"]
["TCGA_SARC","TCGA-N1-A6IA-01A","PPP4R3B--KYNU","2:PPP4R3B:55615451:-:2:KYNU:142885349:+:strandcross"]
["TCGA_SARC","TCGA-N1-A6IA-01A","CPNE2--LINC00922","16:CPNE2:57092790:+:16:LINC00922:65363808:-:strandcross"]
["TCGA_SARC","TCGA-N1-A6IA-01A","EIF4G3--LINC01362","1:EIF4G3:21050866:-:1:LINC01362:82996715:+:strandcross"]
["TCGA_SARC","TCGA-N1-A6IA-01A","RB1--MED4","13:RB1:48342714:+:13:MED4:48090418:-:strandcross"]
["TCGA_SARC","TCGA-N1-A6IA-01A","GPATCH8--METTL16","17:GPATCH8:44435065:-:17:METTL16:2477885:-:reg"]
["TCGA_SARC","TCGA-N1-A6IA-01A","SERPINE2--NLGN4X","2:SERPINE2:224039099:-:X:NLGN4X:6151771:-:fusion"]
["TCGA_SARC","TCGA-N1-A6IA-01A","HELZ--OAZ1","17:HELZ:67203319:-:19:OAZ1:2272735:+:fusion"]
["TCGA_SARC","TCGA-N1-A6IA-01A","TNPO1--ZNF366","5:TNPO1:72861914:+:5:ZNF366:72461510:-:strandcross"]
["TCGA_SARC","TCGA-PC-A5DM-01A","FSTL1--CPOX","3:FSTL1:120409532:-:3:CPOX:98585659:-:reg"]
["TCGA_SARC","TCGA-PC-A5DM-01A","RNF213--DNAH17-AS1","17:RNF213:80263778:+:17:DNAH17-AS1:78494014:+:rev"]
["TCGA_SARC","TCGA-PC-A5DM-01A","RALBP1--LINC02380","18:RALBP1:9525851:+:4:LINC02380:57464225:+:fusion"]
["TCGA_SARC","TCGA-PC-A5DM-01A","SACS--MYO16","13:SACS:23411220:-:13:MYO16:109179542:+:strandcross"]
["TCGA_SARC","TCGA-PC-A5DM-01A","STXBP5--TNFRSF19","6:STXBP5:147339238:+:13:TNFRSF19:23673372:+:fusion"]
["TCGA_SARC","TCGA-PC-A5DN-01A","NUAK1--C12orf65","12:NUAK1:106083864:-:12:C12orf65:123253647:+:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","LRP1--ETV6","12:LRP1:57145490:+:12:ETV6:11884445:+:rev"]
["TCGA_SARC","TCGA-PC-A5DN-01A","ATF7IP--FAM83B","12:ATF7IP:14365827:+:6:FAM83B:54939706:+:fusion"]
["TCGA_SARC","TCGA-PC-A5DN-01A","CLIP1--FKBP5","12:CLIP1:122422521:-:6:FKBP5:35720548:-:fusion"]
["TCGA_SARC","TCGA-PC-A5DN-01A","KCNMB4--GLIPR1L2","12:KCNMB4:70367070:+:12:GLIPR1L2:75422904:+:reg"]
["TCGA_SARC","TCGA-PC-A5DN-01A","VPS29--HSPB8","12:VPS29:110496012:-:12:HSPB8:119220714:+:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","ZDHHC17--LINC02408","12:ZDHHC17:76764329:+:12:LINC02408:67565514:+:rev"]
["TCGA_SARC","TCGA-PC-A5DN-01A","HSP90B1--MDM2","12:HSP90B1:103947430:+:12:MDM2:68835829:+:rev"]
["TCGA_SARC","TCGA-PC-A5DN-01A","BEST3--MYRFL","12:BEST3:69671428:-:12:MYRFL:69855280:+:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","ACADS--NUAK1","12:ACADS:120727189:+:12:NUAK1:106072843:-:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","ANO2--NUDT3","12:ANO2:5806052:-:6:NUDT3:34295685:-:fusion"]
["TCGA_SARC","TCGA-PC-A5DN-01A","CPSF6--PRIM2","12:CPSF6:69262562:+:6:PRIM2:57434971:+:fusion"]
["TCGA_SARC","TCGA-PC-A5DN-01A","YEATS4--PTPRR","12:YEATS4:69370975:+:12:PTPRR:70662605:-:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","CPSF6--TMBIM4","12:CPSF6:69262562:+:12:TMBIM4:66153448:-:strandcross"]
["TCGA_SARC","TCGA-PC-A5DN-01A","MAPKAPK5--UNC119B","12:MAPKAPK5:111888618:+:12:UNC119B:120719920:+:reg"]
["TCGA_SARC","TCGA-PC-A5DO-01A","CYP7B1--EPS15","8:CYP7B1:64604682:-:1:EPS15:51481314:-:fusion"]
["TCGA_SARC","TCGA-PT-A8TR-01A","PUM1--PLAG1","1:PUM1:31065616:-:8:PLAG1:56171189:-:fusion"]
["TCGA_SARC","TCGA-QC-A6FX-01A","LINC01625--AHI1","6:LINC01625:139472527:-:6:AHI1:135411544:-:reg"]
["TCGA_SARC","TCGA-QC-A6FX-01A","MRPL18--C6orf118","6:MRPL18:159791126:+:6:C6orf118:165290067:-:strandcross"]
["TCGA_SARC","TCGA-QC-A6FX-01A","ZNF730--CEP89","19:ZNF730:23117176:+:19:CEP89:32901412:-:strandcross"]
["TCGA_SARC","TCGA-QC-A6FX-01A","SEPT9--DNAI2","17:SEPT9:77402703:+:17:DNAI2:74289594:+:rev"]
["TCGA_SARC","TCGA-QC-A6FX-01A","ZNF507--LINC00662","19:ZNF507:32360618:+:19:LINC00662:27715858:-:strandcross"]
["TCGA_SARC","TCGA-QC-A6FX-01A","ANKFN1--PRR11","17:ANKFN1:56499098:+:17:PRR11:59169748:+:reg"]
["TCGA_SARC","TCGA-QC-A6FX-01A","STXBP5--SASH1","6:STXBP5:147239270:+:6:SASH1:148468545:+:reg"]
["TCGA_SARC","TCGA-QC-A6FX-01A","SNX9--SERAC1","6:SNX9:157928702:+:6:SERAC1:158158364:-:strandcross"]
["TCGA_SARC","TCGA-QC-A6FX-01A","ZNF429--ZNF569","19:ZNF429:21505774:+:19:ZNF569:37444964:-:strandcross"]
["TCGA_SARC","TCGA-QC-A7B5-01A","SNHG26--CAMK2B","7:SNHG26:22854280:+:7:CAMK2B:44220901:-:strandcross"]
["TCGA_SARC","TCGA-QC-A7B5-01A","ATP2B4--MRPS21","1:ATP2B4:203727571:+:1:MRPS21:150308048:+:rev"]
["TCGA_SARC","TCGA-QC-AA9N-01A","PDS5B--COL4A1","13:PDS5B:32586593:+:13:COL4A1:110242734:-:strandcross"]
["TCGA_SARC","TCGA-QC-AA9N-01A","NRIP1--CSNK1G1","21:NRIP1:15043495:-:15:CSNK1G1:64216713:-:fusion"]
["TCGA_SARC","TCGA-QC-AA9N-01A","TP53--EFCAB5","17:TP53:7687377:-:17:EFCAB5:29968791:+:strandcross"]
["TCGA_SARC","TCGA-QC-AA9N-01A","RORA--FSTL1","15:RORA:60592387:-:3:FSTL1:120404971:-:fusion"]
["TCGA_SARC","TCGA-QC-AA9N-01A","MARCH8--NCAM2","10:MARCH8:45594235:-:21:NCAM2:21324383:+:fusion"]
["TCGA_SARC","TCGA-QC-AA9N-01A","TIAM1--NCAM2","21:TIAM1:31558927:-:21:NCAM2:21324383:+:strandcross"]
["TCGA_SARC","TCGA-QC-AA9N-01A","FSTL1--RORA","3:FSTL1:120409532:-:15:RORA:60531851:-:fusion"]
["TCGA_SARC","TCGA-QQ-A5V9-01A","ROCK1--LAMP5","18:ROCK1:21039472:-:20:LAMP5:9529642:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","TRAPPC9--AC068633.1","8:TRAPPC9:140360050:-:3:AC068633.1:118508692:-:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","DENND4A--AC087482.1","15:DENND4A:65690415:-:15:AC087482.1:66987647:-:rev"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SEM1--AL162384.1","7:SEM1:96709688:-:9:AL162384.1:6066365:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ZBTB16--CARD18","11:ZBTB16:114064568:+:11:CARD18:105139078:-:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SKAP2--CEP126","7:SKAP2:26844030:-:11:CEP126:101944265:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ARHGEF12--CEP164","11:ARHGEF12:120337275:+:11:CEP164:117335605:+:rev"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SCAMP2--CHRNA9","15:SCAMP2:74845473:-:4:CHRNA9:40348882:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ANLN--DGKB","7:ANLN:36396419:+:7:DGKB:14478225:-:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ANO6--EDA","12:ANO6:45403536:+:X:EDA:69860857:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","TRIM13--MELTF-AS1","13:TRIM13:49997763:+:3:MELTF-AS1:197003602:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","NPAT--OAF","11:NPAT:108222500:-:11:OAF:120225661:+:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SMPX--PDHA1","X:SMPX:21743750:-:X:PDHA1:19349312:+:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ZBTB24--STK32C","6:ZBTB24:109476175:-:10:STK32C:132245955:-:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SPECC1L-ADORA2A--TM6SF1","22:SPECC1L-ADORA2A:24369320:+:15:TM6SF1:83126755:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","ANLN--TMEM135","7:ANLN:36439290:+:11:TMEM135:87157341:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VB-01A","AC098820.1--FN1","2:AC098820.1:216498607:-:2:FN1:215379317:-:reg"]
["TCGA_SARC","TCGA-QQ-A5VC-01A","C2CD3--GRM5-AS1","11:C2CD3:74139605:-:11:GRM5-AS1:88522891:+:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VC-01A","ERC1--MRPS9","12:ERC1:1371977:+:2:MRPS9:105099670:+:fusion"]
["TCGA_SARC","TCGA-QQ-A5VC-01A","NEK7--SMYD3","1:NEK7:198232637:+:1:SMYD3:245929937:-:strandcross"]
["TCGA_SARC","TCGA-QQ-A5VC-01A","TRERF1--SUPT3H","6:TRERF1:42243248:-:6:SUPT3H:45020632:-:rev"]
["TCGA_SARC","TCGA-QQ-A8VB-01A","CNOT2--TBC1D30","12:CNOT2:70243480:+:12:TBC1D30:64843380:+:rev"]
["TCGA_SARC","TCGA-QQ-A8VF-01A","ZNF223--AP2A1","19:ZNF223:44055191:+:19:AP2A1:49795630:+:reg"]
["TCGA_SARC","TCGA-QQ-A8VF-01A","ZNF383--CEBPG","19:ZNF383:37218274:+:19:CEBPG:33379144:+:rev"]
["TCGA_SARC","TCGA-QQ-A8VF-01A","PPP1R37--ZNF383","19:PPP1R37:45093527:+:19:ZNF383:37230409:+:rev"]
["TCGA_SARC","TCGA-QQ-A8VH-01A","PXDN--AC087477.2","2:PXDN:1744256:-:15:AC087477.2:96403510:+:fusion"]
["TCGA_SARC","TCGA-QQ-A8VH-01A","MARCH5--AL162414.1","10:MARCH5:92311337:+:9:AL162414.1:111139619:-:fusion"]
["TCGA_SARC","TCGA-QQ-A8VH-01A","AL133372.2--LINC02281","14:AL133372.2:30296975:-:14:LINC02281:28824947:-:reg"]
["TCGA_SARC","TCGA-QQ-A8VH-01A","MEG3--SIVA1","14:MEG3:100831534:+:14:SIVA1:104766790:+:reg"]
["TCGA_SARC","TCGA-RN-AAAQ-01A","EML1--GPI","14:EML1:99793543:+:19:GPI:34393248:+:fusion"]
["TCGA_SARC","TCGA-RN-AAAQ-01A","CUX1--POP7","7:CUX1:102115273:+:7:POP7:100706821:+:rev"]
["TCGA_SARC","TCGA-RN-AAAQ-01A","NFE2L3--POU6F2","7:NFE2L3:26178122:+:7:POU6F2:39339642:+:reg"]
["TCGA_SARC","TCGA-SG-A6Z4-01A","FAM214A--CCDC102B","15:FAM214A:52593578:-:18:CCDC102B:69054030:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z4-01A","AC092691.1--CCDC58","3:AC092691.1:117997182:-:3:CCDC58:122363027:-:rev"]
["TCGA_SARC","TCGA-SG-A6Z4-01A","CCDC36--NR3C2","3:CCDC36:49199573:+:4:NR3C2:148194862:-:fusion"]
["TCGA_SARC","TCGA-SG-A6Z4-01A","RBM26--RAMP2-AS1","13:RBM26:79334344:-:17:RAMP2-AS1:42760711:-:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","CPM--AC068305.3","12:CPM:68932678:-:12:AC068305.3:59056006:+:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","PLXNA4--AC068305.3","7:PLXNA4:132576422:-:12:AC068305.3:59056006:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","USP15--AC090502.1","12:USP15:62325933:+:12:AC090502.1:74157884:-:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","DNM3--AC136188.1","1:DNM3:172131288:+:12:AC136188.1:73906940:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","RWDD1--CEP85L","6:RWDD1:116584857:+:6:CEP85L:118523920:-:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","ZNF251--CHMP4C","8:ZNF251:144753683:-:8:CHMP4C:81753064:+:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","CPM--DNM3","12:CPM:68932678:-:1:DNM3:172308728:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","RAB21--DNM3","12:RAB21:71755288:+:1:DNM3:172081832:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","SYT1--EPYC","12:SYT1:79047362:+:12:EPYC:90978262:-:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","LGR5--FAM19A2","12:LGR5:71535186:+:12:FAM19A2:61867426:-:strandcross"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","TSFM--LRRIQ1","12:TSFM:57787162:+:12:LRRIQ1:85124070:+:reg"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","LINC-PINT--MDM2","7:LINC-PINT:131107720:-:12:MDM2:68820325:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","TSFM--METTL11B","12:TSFM:57787162:+:1:METTL11B:170157969:+:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","RAB21--SLC4A8","12:RAB21:71770699:+:12:SLC4A8:51469614:+:rev"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","POC1B--TNR","12:POC1B:89491936:-:1:TNR:175406777:-:fusion"]
["TCGA_SARC","TCGA-SG-A6Z7-01A","PLXNA4--TRHDE","7:PLXNA4:132576422:-:12:TRHDE:72286681:+:fusion"]
["TCGA_SARC","TCGA-SG-A849-01A","GAS7--ATP8B4","17:GAS7:10198208:-:15:ATP8B4:49981294:-:fusion"]
["TCGA_SARC","TCGA-SG-A849-01A","FBN1--EIF3B","15:FBN1:48465568:-:7:EIF3B:2375389:+:fusion"]
["TCGA_SARC","TCGA-SG-A849-01A","YKT6--EIF3B","7:YKT6:44201239:+:7:EIF3B:2379394:+:rev"]
["TCGA_SARC","TCGA-SG-A849-01A","EIF3B--GDI2","7:EIF3B:2379242:+:10:GDI2:5786050:-:fusion"]
["TCGA_SARC","TCGA-SG-A849-01A","RNF11--LINC00616","1:RNF11:51270125:+:4:LINC00616:138032516:-:fusion"]
["TCGA_SARC","TCGA-SI-A71O-01A","NTM--CTNNA2","11:NTM:132212147:+:2:CTNNA2:79858013:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-01A","MRPS23--FAM117A","17:MRPS23:57849240:-:17:FAM117A:49732720:-:reg"]
["TCGA_SARC","TCGA-SI-A71O-01A","GRIN2A--MTHFD1L","16:GRIN2A:9937959:-:6:MTHFD1L:151092467:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-01A","KDM2A--SLC5A4","11:KDM2A:67180217:+:22:SLC5A4:32254213:-:fusion"]
["TCGA_SARC","TCGA-SI-A71O-01A","PHF3--SYT4","6:PHF3:63646795:+:18:SYT4:43274394:-:fusion"]
["TCGA_SARC","TCGA-SI-A71O-06A","DNM2--ARHGEF7","19:DNM2:10820089:+:13:ARHGEF7:111300748:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-06A","SUPT20H--ATP8A2","13:SUPT20H:37059480:-:13:ATP8A2:25769046:+:strandcross"]
["TCGA_SARC","TCGA-SI-A71O-06A","USP9Y--ERC1","Y:USP9Y:12739629:+:12:ERC1:1236769:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-06A","PHF20--NCOA6","20:PHF20:35847434:+:20:NCOA6:34792563:-:strandcross"]
["TCGA_SARC","TCGA-SI-A71O-06A","CACNA1A--PCCA","19:CACNA1A:13505967:-:13:PCCA:100515427:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-06A","ARHGEF7--SPATA7","13:ARHGEF7:111288443:+:14:SPATA7:88416711:+:fusion"]
["TCGA_SARC","TCGA-SI-A71O-06A","AC004943.2--WWOX","16:AC004943.2:72745466:+:16:WWOX:78386860:+:reg"]
["TCGA_SARC","TCGA-SI-A71P-01A","MYH10--CDKN2A","17:MYH10:8622902:-:9:CDKN2A:21971208:-:fusion"]
["TCGA_SARC","TCGA-SI-A71P-01A","CDKN2A--MYH10","9:CDKN2A:21974678:-:17:MYH10:8604982:-:fusion"]
["TCGA_SARC","TCGA-SI-A71Q-01A","PPHLN1--AC008083.1","12:PPHLN1:42335974:+:12:AC008083.1:47238290:-:strandcross"]
["TCGA_SARC","TCGA-SI-A71Q-01A","ARHGAP31--CFAP100","3:ARHGAP31:119295004:+:3:CFAP100:126407172:+:reg"]
["TCGA_SARC","TCGA-SI-A71Q-01A","HNRNPM--DMD","19:HNRNPM:8465515:+:X:DMD:31968514:-:fusion"]
["TCGA_SARC","TCGA-SI-A71Q-01A","VCAN--EDIL3","5:VCAN:83493931:+:5:EDIL3:83963360:-:strandcross"]
["TCGA_SARC","TCGA-SI-A71Q-01A","CD83--EHF","6:CD83:14118065:+:11:EHF:34642628:+:fusion"]
["TCGA_SARC","TCGA-SI-A71Q-01A","SDHAF3--LAMB1","7:SDHAF3:97117897:+:7:LAMB1:107955630:-:strandcross"]
["TCGA_SARC","TCGA-SI-A71Q-01A","ZNF268--LPAR1","12:ZNF268:133182030:+:9:LPAR1:110942168:-:fusion"]
["TCGA_SARC","TCGA-SI-A71Q-01A","CCDC144NL-AS1--POT1-AS1","17:CCDC144NL-AS1:20868685:+:7:POT1-AS1:124940280:+:fusion"]
["TCGA_SARC","TCGA-SI-A71Q-01A","RPL30--PPHLN1","8:RPL30:98044943:-:12:PPHLN1:42374863:+:fusion"]
["TCGA_SARC","TCGA-SI-AA8B-01A","C1orf21--ANGPTL1","1:C1orf21:184477603:+:1:ANGPTL1:178869223:-:strandcross"]
["TCGA_SARC","TCGA-SI-AA8B-01A","RUBCNL--CUBN","13:RUBCNL:46387677:-:10:CUBN:16851443:-:fusion"]
["TCGA_SARC","TCGA-SI-AA8B-01A","PTPRM--DLGAP1-AS5","18:PTPRM:7955414:+:18:DLGAP1-AS5:4293160:+:rev"]
["TCGA_SARC","TCGA-SI-AA8B-01A","CDK8--GCNT7","13:CDK8:26353880:+:20:GCNT7:56495297:-:fusion"]
["TCGA_SARC","TCGA-SI-AA8B-01A","RORA--PTPN9","15:RORA:60592387:-:15:PTPN9:75506003:-:rev"]
["TCGA_SARC","TCGA-SI-AA8C-01A","PSMF1--CHST8","20:PSMF1:1125650:+:19:CHST8:33689176:+:fusion"]
["TCGA_SARC","TCGA-SI-AA8C-01A","MACC1-AS1--PHF14","7:MACC1-AS1:20150589:+:7:PHF14:10974835:+:rev"]
["TCGA_SARC","TCGA-SI-AA8C-01A","LRP5L--SGSM3","22:LRP5L:25375813:-:22:SGSM3:40400696:+:strandcross"]
["TCGA_SARC","TCGA-UE-A6QU-01A","FAM83D--AP005203.1","20:FAM83D:38926925:+:18:AP005203.1:5003289:-:fusion"]
["TCGA_SARC","TCGA-UE-A6QU-01A","GNL3L--GABRB3","X:GNL3L:54532585:+:15:GABRB3:26583414:-:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","ITGAV--ARHGAP15","2:ITGAV:186669814:+:2:ARHGAP15:143228581:+:rev"]
["TCGA_SARC","TCGA-VT-A80G-01A","XXYLT1--ETV5","3:XXYLT1:195156449:-:3:ETV5:186066072:-:reg"]
["TCGA_SARC","TCGA-VT-A80G-01A","GLIS3--IL17REL","9:GLIS3:3932360:-:22:IL17REL:50001231:-:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","LRAT--NAALADL2","4:LRAT:154636396:+:3:NAALADL2:175096790:+:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","PPP4R1--NUP93","18:PPP4R1:9614226:-:16:NUP93:56823707:+:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","TMEM9B--PSIP1","11:TMEM9B:8962092:-:9:PSIP1:15490124:-:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","UBP1--SLC24A3","3:UBP1:33409236:-:20:SLC24A3:19584971:+:fusion"]
["TCGA_SARC","TCGA-VT-A80G-01A","ATRX--SNTB2","X:ATRX:77697583:-:16:SNTB2:69270143:+:fusion"]
["TCGA_SARC","TCGA-VT-A80J-01A","PPFIA1--BBOX1","11:PPFIA1:70356254:+:11:BBOX1:27115452:+:rev"]
["TCGA_SARC","TCGA-VT-A80J-01A","SMAD3--INTS14","15:SMAD3:67066360:+:15:INTS14:65584888:-:strandcross"]
["TCGA_SARC","TCGA-VT-A80J-01A","GBF1--LBX1-AS1","10:GBF1:102260116:+:10:LBX1-AS1:101232254:+:rev"]
["TCGA_SARC","TCGA-VT-A80J-01A","TENM3--LINC01886","4:TENM3:182601161:+:2:LINC01886:107555133:+:fusion"]
["TCGA_SARC","TCGA-VT-A80J-01A","MYO5A--NEDD4","15:MYO5A:52340196:-:15:NEDD4:55924699:-:rev"]
["TCGA_SARC","TCGA-VT-A80J-01A","GNG12--PLXNA2","1:GNG12:67833344:-:1:PLXNA2:208084580:-:rev"]
["TCGA_SARC","TCGA-VT-A80J-01A","PNPLA8--SEM1","7:PNPLA8:108526029:-:7:SEM1:96694891:-:reg"]
["TCGA_SARC","TCGA-VT-A80J-01A","ATF6--TENM3","1:ATF6:161792327:+:4:TENM3:182600924:+:fusion"]
["TCGA_SARC","TCGA-VT-A80J-02A","VEZT--AC002463.1","12:VEZT:95217886:+:7:AC002463.1:112632558:+:fusion"]
["TCGA_SARC","TCGA-VT-A80J-02A","TENM3--LINC01886","4:TENM3:182601161:+:2:LINC01886:107555133:+:fusion"]
["TCGA_SARC","TCGA-VT-A80J-02A","PNPLA8--SEM1","7:PNPLA8:108526029:-:7:SEM1:96694891:-:reg"]
["TCGA_SARC","TCGA-VT-A80J-02A","HIPK2--STRIP2","7:HIPK2:139604081:-:7:STRIP2:129480785:+:strandcross"]
["TCGA_SARC","TCGA-VT-A80J-02A","ATF6--TENM3","1:ATF6:161792327:+:4:TENM3:182600924:+:fusion"]
["TCGA_SARC","TCGA-VT-AB3D-01A","BCL9--C1orf21","1:BCL9:147615902:+:1:C1orf21:184619518:+:reg"]
["TCGA_SARC","TCGA-WK-A8XO-01A","SENP6--AKIRIN2","6:SENP6:75678927:+:6:AKIRIN2:87675607:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8XO-01A","CNOT2--CEP290","12:CNOT2:70278274:+:12:CEP290:88089487:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8XO-01A","B4GALNT1--EPYC","12:B4GALNT1:57631915:-:12:EPYC:91002578:-:rev"]
["TCGA_SARC","TCGA-WK-A8XO-01A","CEP290--FGGY","12:CEP290:88089032:-:1:FGGY:59625988:+:fusion"]
["TCGA_SARC","TCGA-WK-A8XO-01A","DAB1--LINC01748","1:DAB1:57423930:-:1:LINC01748:60542411:-:rev"]
["TCGA_SARC","TCGA-WK-A8XO-01A","NTN4--LINC02426","12:NTN4:95713212:-:12:LINC02426:81954248:+:strandcross"]
["TCGA_SARC","TCGA-WK-A8XO-01A","LINC01719--LRRIQ1","1:LINC01719:146052948:+:12:LRRIQ1:85127832:+:fusion"]
["TCGA_SARC","TCGA-WK-A8XO-01A","ZNF418--MYO9B","19:ZNF418:57927977:-:19:MYO9B:17209586:+:strandcross"]
["TCGA_SARC","TCGA-WK-A8XO-01A","RAB3IP--NUCB2","12:RAB3IP:69739031:+:11:NUCB2:17282789:+:fusion"]
["TCGA_SARC","TCGA-WK-A8XO-01A","TMTC3--PRRC2C","12:TMTC3:88176319:+:1:PRRC2C:171591587:+:fusion"]
["TCGA_SARC","TCGA-WK-A8XO-01A","MDM2--PTPRR","12:MDM2:68813628:+:12:PTPRR:70684783:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8XS-01A","CRYL1--MLNR","13:CRYL1:20525754:-:13:MLNR:49222040:+:strandcross"]
["TCGA_SARC","TCGA-WK-A8XS-01A","COG4--PMFBP1","16:COG4:70512239:-:16:PMFBP1:72154459:-:rev"]
["TCGA_SARC","TCGA-WK-A8XS-01A","SNX30--SEC16A","9:SNX30:112804967:+:9:SEC16A:136443900:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8XS-01A","CALCOCO2--WRAP53","17:CALCOCO2:48856187:+:17:WRAP53:7700741:+:rev"]
["TCGA_SARC","TCGA-WK-A8XS-01A","ALOX12-AS1--ZNF652","17:ALOX12-AS1:7002484:-:17:ZNF652:49298924:-:rev"]
["TCGA_SARC","TCGA-WK-A8XT-01A","NOTCH2--LINC01762","1:NOTCH2:119935472:-:1:LINC01762:116428494:-:reg"]
["TCGA_SARC","TCGA-WK-A8XX-01A","NUP58--AL359736.1","13:NUP58:25315467:+:13:AL359736.1:24222819:+:rev"]
["TCGA_SARC","TCGA-WK-A8XX-01A","RNF217--ANKRD6","6:RNF217:124963426:+:6:ANKRD6:89629112:+:rev"]
["TCGA_SARC","TCGA-WK-A8XX-01A","JPH2--RNF20","20:JPH2:44159618:-:9:RNF20:101535398:+:fusion"]
["TCGA_SARC","TCGA-WK-A8XX-01A","JPH2--TMEM246-AS1","20:JPH2:44159618:-:9:TMEM246-AS1:101481363:+:fusion"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","YWHAE--AL160396.1","17:YWHAE:1400047:-:13:AL160396.1:114175645:-:fusion"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","PMP22--DDR2","17:PMP22:15259094:-:1:DDR2:162719037:+:fusion"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","SPATS2L--DPP10-AS1","2:SPATS2L:200329480:+:2:DPP10-AS1:115145027:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","RANBP2--LINC01885","2:RANBP2:108719678:+:2:LINC01885:107528864:-:strandcross"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","ALKBH5--NUF2","17:ALKBH5:18185013:+:1:NUF2:163336751:+:fusion"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","SOCS6--PMS1","18:SOCS6:70289090:+:2:PMS1:189873496:+:fusion"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","DHX8--SPACA3","17:DHX8:43484185:+:17:SPACA3:32996843:+:rev"]
["TCGA_SARC","TCGA-WK-A8Y0-01A","ACLY--TAF15","17:ACLY:41896620:-:17:TAF15:35836132:+:strandcross"]
["TCGA_SARC","TCGA-WP-A9GB-01A","MEIS2--BBS2","15:MEIS2:36950324:-:16:BBS2:56511284:-:fusion"]
["TCGA_SARC","TCGA-WP-A9GB-01A","INO80--CYSTM1","15:INO80:41044904:-:5:CYSTM1:140281497:+:fusion"]
["TCGA_SARC","TCGA-WP-A9GB-01A","XPNPEP1--FAM13B","10:XPNPEP1:109915011:-:5:FAM13B:137962469:-:fusion"]
["TCGA_SARC","TCGA-WP-A9GB-01A","AMFR--FTO","16:AMFR:56367444:-:16:FTO:53933985:+:strandcross"]
["TCGA_SARC","TCGA-WP-A9GB-01A","GNAO1--FTO","16:GNAO1:56192616:+:16:FTO:53933985:+:rev"]
["TCGA_SARC","TCGA-WP-A9GB-01A","USP48--KALRN","1:USP48:21701498:-:3:KALRN:124518400:+:fusion"]
["TCGA_SARC","TCGA-WP-A9GB-01A","FOXJ3--LINC01184","1:FOXJ3:42265115:-:5:LINC01184:127966928:-:fusion"]
["TCGA_SARC","TCGA-WP-A9GB-01A","DAAM1--MNAT1","14:DAAM1:59331920:+:14:MNAT1:60879714:+:reg"]
["TCGA_SARC","TCGA-X2-A95T-01A","SH3YL1--MTHFD1L","2:SH3YL1:229966:-:6:MTHFD1L:150922205:+:fusion"]
["TCGA_SARC","TCGA-X6-A7W8-01A","ZDHHC20--IGHV7-81","13:ZDHHC20:21459054:-:14:IGHV7-81:106874887:-:fusion"]
["TCGA_SARC","TCGA-X6-A7W8-01A","PIEZO2--IMPA2","18:PIEZO2:10672690:-:18:IMPA2:12030343:+:strandcross"]
["TCGA_SARC","TCGA-X6-A7W8-01A","PAN3--MICU2","13:PAN3:28220378:+:13:MICU2:21522650:-:strandcross"]
["TCGA_SARC","TCGA-X6-A7W8-01A","ACACA--PARD6G","17:ACACA:37358999:-:18:PARD6G:80202932:-:fusion"]
["TCGA_SARC","TCGA-X6-A7W8-01A","FAM222B--PRPSAP1","17:FAM222B:28812209:-:17:PRPSAP1:76313891:-:rev"]
["TCGA_SARC","TCGA-X6-A7W8-01A","MAP3K14--SRP68","17:MAP3K14:45284812:-:17:SRP68:76067330:-:rev"]
["TCGA_SARC","TCGA-X6-A7W8-01A","ARFGEF2--TTLL9","20:ARFGEF2:49017550:+:20:TTLL9:31922963:+:rev"]
["TCGA_SARC","TCGA-X6-A7WA-01A","PDZD8--CACUL1","10:PDZD8:117318872:-:10:CACUL1:118674460:-:rev"]
["TCGA_SARC","TCGA-X6-A7WB-01A","KLF12--CAMK2G","13:KLF12:73943981:-:10:CAMK2G:73817554:-:fusion"]
["TCGA_SARC","TCGA-X6-A7WB-01A","ATRX--MIR325HG","X:ATRX:77717131:-:X:MIR325HG:76693087:-:reg"]
["TCGA_SARC","TCGA-X6-A7WB-01A","PPARD--SLC22A7","6:PPARD:35411217:+:6:SLC22A7:43299898:+:reg"]
["TCGA_SARC","TCGA-X6-A7WB-01A","WDFY2--STK26","13:WDFY2:51584824:+:X:STK26:132054631:+:fusion"]
["TCGA_SARC","TCGA-X6-A7WC-01A","ARHGEF17--AAMDC","11:ARHGEF17:73311830:+:11:AAMDC:77842479:+:reg"]
["TCGA_SARC","TCGA-X6-A7WC-01A","PDE4B--AC093158.1","1:PDE4B:66355620:+:1:AC093158.1:74369119:-:strandcross"]
["TCGA_SARC","TCGA-X6-A7WC-01A","SGCD--HMMR","5:SGCD:156595051:+:5:HMMR:163463856:+:reg"]
["TCGA_SARC","TCGA-X6-A7WC-01A","TNIP1--SGCD","5:TNIP1:151039097:-:5:SGCD:156123856:+:strandcross"]
["TCGA_SARC","TCGA-X6-A7WC-01A","VWCE--SH3D19","11:VWCE:61280624:-:4:SH3D19:151176955:-:fusion"]
["TCGA_SARC","TCGA-X6-A7WD-01A","AL160290.2--ALAS2","10:AL160290.2:123362147:+:X:ALAS2:55009343:-:fusion"]
["TCGA_SARC","TCGA-X6-A8C2-01A","BACH2--BIVM-ERCC5","6:BACH2:90206569:-:13:BIVM-ERCC5:102816428:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C2-01A","TANK--CACNB4","2:TANK:161160484:+:2:CACNB4:151883370:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C2-01A","CLTC--DNAH17","17:CLTC:59620173:+:17:DNAH17:78515022:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C2-01A","NFATC2IP--KIAA0556","16:NFATC2IP:28952204:+:16:KIAA0556:27749584:+:rev"]
["TCGA_SARC","TCGA-X6-A8C2-01A","STAG2--LZTS1-AS1","X:STAG2:124031125:+:8:LZTS1-AS1:20289209:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C2-01A","MTMR12--MAEL","5:MTMR12:32312758:-:1:MAEL:166992686:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C2-01A","TNFAIP6--ORC4","2:TNFAIP6:151357760:+:2:ORC4:147938393:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C2-01A","ZNF595--RAB28","4:ZNF595:53491:+:4:RAB28:13381594:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C2-01A","PRRC2A--TREM2","6:PRRC2A:31620858:+:6:TREM2:41159882:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C3-01A","TEAD1--AC107973.1","11:TEAD1:12675561:+:11:AC107973.1:29881482:+:reg"]
["TCGA_SARC","TCGA-X6-A8C3-01A","RABGEF1--CPED1","7:RABGEF1:66682258:+:7:CPED1:121015665:+:reg"]
["TCGA_SARC","TCGA-X6-A8C3-01A","RORA--LOXL1","15:RORA:60592387:-:15:LOXL1:73942854:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C3-01A","PRPF19--NLRP14","11:PRPF19:60900582:-:11:NLRP14:7038566:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C3-01A","RFX7--PCSK6","15:RFX7:56243125:-:15:PCSK6:101332031:-:rev"]
["TCGA_SARC","TCGA-X6-A8C3-01A","ENOSF1--PPT1","18:ENOSF1:706470:-:1:PPT1:40092507:-:fusion"]
["TCGA_SARC","TCGA-X6-A8C3-01A","MACF1--SHISA6","1:MACF1:39258028:+:17:SHISA6:11379414:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C3-01A","AP003108.2--TPH1","11:AP003108.2:61438113:+:11:TPH1:18040788:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C4-01A","RAB21--CRADD","12:RAB21:71782658:+:12:CRADD:93859319:+:reg"]
["TCGA_SARC","TCGA-X6-A8C4-01A","MPDU1--DNAH9","17:MPDU1:7583965:+:17:DNAH9:11886825:+:reg"]
["TCGA_SARC","TCGA-X6-A8C4-01A","DCAF7--LINC01483","17:DCAF7:63550815:+:17:LINC01483:69594787:+:reg"]
["TCGA_SARC","TCGA-X6-A8C4-01A","GALNT11--PTPRN2","7:GALNT11:152025884:+:7:PTPRN2:158489785:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C4-01A","TUBGCP6--TCF7L1","22:TUBGCP6:50229404:-:2:TCF7L1:85302484:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C5-01A","ZFYVE28--CRMP1","4:ZFYVE28:2418285:-:4:CRMP1:5856307:-:rev"]
["TCGA_SARC","TCGA-X6-A8C5-01A","MYH10--OLFM4","17:MYH10:8630654:-:13:OLFM4:53034348:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C5-01A","ZNF177--TECR","19:ZNF177:9364948:+:19:TECR:14562525:+:reg"]
["TCGA_SARC","TCGA-X6-A8C6-01A","KBTBD11-OT1--AC090204.1","8:KBTBD11-OT1:1945655:+:8:AC090204.1:33041635:+:reg"]
["TCGA_SARC","TCGA-X6-A8C6-01A","DENND1B--AC099060.1","1:DENND1B:197642711:-:1:AC099060.1:76758404:-:reg"]
["TCGA_SARC","TCGA-X6-A8C6-01A","NUMB--AC128685.1","14:NUMB:73292734:-:3:AC128685.1:163207975:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","DERA--CA3","12:DERA:15911414:+:8:CA3:85382954:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","EMC7--CD27","15:EMC7:34095895:-:12:CD27:6445424:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","KIDINS220--COLEC11","2:KIDINS220:8750112:-:2:COLEC11:3604315:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","SUCO--DENND1B","1:SUCO:172578389:+:1:DENND1B:197772932:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","TP53--DNAH2","17:TP53:7687377:-:17:DNAH2:7823834:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","CD44--EXT2","11:CD44:35139370:+:11:EXT2:44244149:+:reg"]
["TCGA_SARC","TCGA-X6-A8C6-01A","REPS2--GLRA2","X:REPS2:17103779:+:X:GLRA2:14690710:+:rev"]
["TCGA_SARC","TCGA-X6-A8C6-01A","LIMK1--GNAT3","7:LIMK1:74115958:+:7:GNAT3:80494647:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","KANK1--LINC00604","9:KANK1:540667:+:5:LINC00604:40267356:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","ABL1--LINC01505","9:ABL1:130863035:+:9:LINC01505:106638159:+:rev"]
["TCGA_SARC","TCGA-X6-A8C6-01A","CASC4--LRRC8D","15:CASC4:44338317:+:1:LRRC8D:89933067:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","ATF7--LYZ","12:ATF7:53626279:-:12:LYZ:69352220:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","HIRA--NSMCE2","22:HIRA:19431440:-:8:NSMCE2:125357219:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","R3HDM2--NTN4","12:R3HDM2:57395749:-:12:NTN4:95683711:-:rev"]
["TCGA_SARC","TCGA-X6-A8C6-01A","FSD1L--OTUD7B","9:FSD1L:105448235:+:1:OTUD7B:149977576:-:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","FBXO8--PALLD","4:FBXO8:174283410:-:4:PALLD:168668190:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","COLEC11--PINX1","2:COLEC11:3604470:+:8:PINX1:10834775:-:fusion"]
["TCGA_SARC","TCGA-X6-A8C6-01A","CTPS2--RGN","X:CTPS2:16698236:-:X:RGN:47081130:+:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","LIMK1--SEM1","7:LIMK1:74109036:+:7:SEM1:96694891:-:strandcross"]
["TCGA_SARC","TCGA-X6-A8C6-01A","LINC00630--TOGARAM2","X:LINC00630:102827144:+:2:TOGARAM2:28994725:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C7-01A","GSE1--LBP","16:GSE1:85171807:+:20:LBP:38376625:+:fusion"]
["TCGA_SARC","TCGA-X6-A8C7-01A","SS18--SSX1","18:SS18:26032399:-:X:SSX1:48263782:+:fusion"]
["TCGA_SARC","TCGA-X9-A971-01A","PELI2--AL137230.2","14:PELI2:56118737:+:14:AL137230.2:89412490:-:strandcross"]
["TCGA_SARC","TCGA-X9-A971-01A","AC016876.1--ALOX15B","17:AC016876.1:7583918:-:17:ALOX15B:8039386:+:strandcross"]
["TCGA_SARC","TCGA-X9-A971-01A","ZFP3--DGCR2","17:ZFP3:5078575:+:22:DGCR2:19068225:-:fusion"]
["TCGA_SARC","TCGA-X9-A971-01A","NKD1--SPATC1L","16:NKD1:50549555:+:21:SPATC1L:46168658:-:fusion"]
["TCGA_SARC","TCGA-X9-A971-01A","PEAK1--ZBTB25","15:PEAK1:77420006:-:14:ZBTB25:64449638:-:fusion"]
["TCGA_SARC","TCGA-Z4-A9VC-01A","FUS--DDIT3","16:FUS:31188357:+:12:DDIT3:57517753:-:fusion"]
["TCGA_SARC","TCGA-Z4-A9VC-01A","DDIT3--FUS","12:DDIT3:57520418:-:16:FUS:31189123:+:fusion"]
["TCGA_SARC","TCGA-Z4-AAPG-01A","AP001065.1--CDV3","21:AP001065.1:44486230:+:3:CDV3:133584002:+:fusion"]
["TCGA_SARC","TCGA-Z4-AAPG-01A","AC058822.1--USP8","4:AC058822.1:54290554:+:15:USP8:50459000:+:fusion"]
["TCGA_SARC","TCGA-3R-A8YX-01A","RAB3IP--FRS2","12:RAB3IP:69739031:FRS2:69562180:rev:+"]
["TCGA_SARC","TCGA-DX-A1KY-01A","ABCF2--WDR86","7:ABCF2:151214879:WDR86:151396196:rev:-"]
["TCGA_SARC","TCGA-DX-A1L0-01A","REV3L--TRAF3IP2","6:REV3L:111472013:TRAF3IP2:111575821:rev:-"]
["TCGA_SARC","TCGA-DX-A23V-01A","PMM2--ABAT","16:PMM2:8811713:ABAT:8735699:rev:+"]
["TCGA_SARC","TCGA-DX-A2IZ-01A","TRHDE--TBC1D15","12:TRHDE:72378121:TBC1D15:71893222:rev:+"]
["TCGA_SARC","TCGA-DX-A3LS-01A","ARHGAP10--EDNRA","4:ARHGAP10:147966839:EDNRA:147519851:rev:+"]
["TCGA_SARC","TCGA-DX-A3LS-01A","CAMSAP1--LCN8","9:CAMSAP1:135881633:LCN8:136757168:rev:-"]
["TCGA_SARC","TCGA-DX-A3LT-01A","CD81-AS1--CARS","11:CD81-AS1:2377586:CARS:3002600:rev:-"]
["TCGA_SARC","TCGA-DX-A3LU-01A","UBR2--BYSL","6:UBR2:42652645:BYSL:41927374:rev:+"]
["TCGA_SARC","TCGA-DX-A3LY-01B","STK40--OSCP1","1:STK40:36385723:OSCP1:36438910:rev:-"]
["TCGA_SARC","TCGA-DX-A3M1-01A","SKA2--HEATR6","17:SKA2:59155131:HEATR6:60060096:rev:-"]
["TCGA_SARC","TCGA-DX-A3M1-01A","APC--NREP-AS1","5:APC:112780903:NREP-AS1:111974375:rev:+"]
["TCGA_SARC","TCGA-DX-A3M2-01A","CRAMP1--TMEM204","16:CRAMP1:1626166:TMEM204:1554782:rev:+"]
["TCGA_SARC","TCGA-DX-A3U6-01A","R3HDM2--AC084033.3","12:R3HDM2:57395749:AC084033.3:57931737:rev:-"]
["TCGA_SARC","TCGA-DX-A48N-01A","C12orf45--TXNRD1","12:C12orf45:104991848:TXNRD1:104327515:rev:+"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","MED26--ABHD8","19:MED26:16627872:ABHD8:17301624:rev:-"]
["TCGA_SARC","TCGA-DX-A6YQ-01A","DDA1--TMEM38A","19:DDA1:17314389:TMEM38A:16679984:rev:+"]
["TCGA_SARC","TCGA-DX-A7ES-01A","PSMB7--NR6A1","9:PSMB7:124405317:NR6A1:124554570:rev:-"]
["TCGA_SARC","TCGA-DX-A8BU-01A","NFKB1--BANK1","4:NFKB1:102594981:BANK1:102063075:rev:+"]
["TCGA_SARC","TCGA-DX-AATS-01A","NEO1--BBS4","15:NEO1:73136027:BBS4:72709700:rev:+"]
["TCGA_SARC","TCGA-DX-AB2E-01A","VCL--AC022400.2","10:VCL:73998375:AC022400.2:73846335:rev:+"]
["TCGA_SARC","TCGA-DX-AB32-01A","ATP2B4--OPTC","1:ATP2B4:203714277:OPTC:203502914:rev:+"]
["TCGA_SARC","TCGA-FX-A3NK-01A","CPM--BEST3","12:CPM:68932678:BEST3:69643787:rev:-"]
["TCGA_SARC","TCGA-FX-A3NK-01A","OSBPL8--CSRP2","12:OSBPL8:76450851:CSRP2:76866261:rev:-"]
["TCGA_SARC","TCGA-FX-A3TO-01A","SPAG5--SDF2","17:SPAG5:28591698:SDF2:28649276:rev:-"]
["TCGA_SARC","TCGA-HB-A3YV-01A","LINC02384--CPM","12:LINC02384:68433284:CPM:68871956:rev:-"]
["TCGA_SARC","TCGA-HB-A43Z-01A","DGUOK--ACTG2","2:DGUOK:73927052:ACTG2:73908673:rev:+"]
["TCGA_SARC","TCGA-HS-A5N7-01A","NUDT21--BBS2","16:NUDT21:56439657:BBS2:56484867:rev:-"]
["TCGA_SARC","TCGA-IE-A4EH-01A","ITGA8--MINDY3","10:ITGA8:15671603:MINDY3:15847943:rev:-"]
["TCGA_SARC","TCGA-IF-A4AJ-01A","SMCHD1--NDC80","18:SMCHD1:2732492:NDC80:2599019:rev:+"]
["TCGA_SARC","TCGA-IF-A4AK-01A","C1orf132--CD34","1:C1orf132:207806005:CD34:207889621:rev:-"]
["TCGA_SARC","TCGA-JV-A5VE-01A","CARMN--PCYOX1L","5:CARMN:149424397:PCYOX1L:149364036:rev:+"]
["TCGA_SARC","TCGA-K1-A3PO-01A","TTC7A--LINC01119","2:TTC7A:47060971:LINC01119:46855923:rev:+"]
["TCGA_SARC","TCGA-K1-A42X-01A","ZDHHC14--ARID1B","6:ZDHHC14:157382266:ARID1B:157110472:rev:+"]
["TCGA_SARC","TCGA-K1-A42X-01A","HHIPL1--CCNK","14:HHIPL1:99645462:CCNK:99507076:rev:+"]
["TCGA_SARC","TCGA-K1-A6RV-01A","PDCD11--FBXL15","10:PDCD11:103406790:FBXL15:102421052:rev:+"]
["TCGA_SARC","TCGA-KD-A5QS-01A","RNF19A--AP003472.1","8:RNF19A:100309867:AP003472.1:100381771:rev:-"]
["TCGA_SARC","TCGA-KD-A5QS-01A","STRN--HEATR5B","2:STRN:36966230:HEATR5B:36981794:rev:-"]
["TCGA_SARC","TCGA-KF-A41W-01A","TMCO3--ATP11A","13:TMCO3:113539507:ATP11A:112785135:rev:+"]
["TCGA_SARC","TCGA-KF-A41W-01A","CUL4A--F7","13:CUL4A:113239551:F7:113117473:rev:+"]
["TCGA_SARC","TCGA-KF-A41W-01A","TMCO3--MCF2L","13:TMCO3:113539507:MCF2L:113045271:rev:+"]
["TCGA_SARC","TCGA-LI-A9QH-01A","SPEN--PLEKHM2","1:SPEN:15876678:PLEKHM2:15733797:rev:+"]
["TCGA_SARC","TCGA-N1-A6IA-01A","ANKHD1--CYSTM1","5:ANKHD1:140449305:CYSTM1:140281497:rev:+"]
["TCGA_SARC","TCGA-N1-A6IA-01A","MGAT4B--RNF130","5:MGAT4B:179798165:RNF130:179920426:rev:-"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","LPP--AC022498.1","3:LPP:188225527:AC022498.1:188146566:rev:+"]
["TCGA_SARC","TCGA-QQ-A5VA-01A","SPATS2--TUBA1C","12:SPATS2:49371290:TUBA1C:49208832:rev:+"]
["TCGA_SARC","TCGA-QQ-A8VF-01A","CLIP1--RSRC2","12:CLIP1:122340753:RSRC2:122508447:rev:-"]
["TCGA_SARC","TCGA-QQ-A8VH-01A","NCOR2--SCARB1","12:NCOR2:124419957:SCARB1:124817707:rev:-"]
["TCGA_SARC","TCGA-VT-A80G-01A","SUPT20H--POSTN","13:SUPT20H:37029765:POSTN:37564560:rev:-"]
["TCGA_SARC","TCGA-VT-A80J-01A","EP400--SFSWAP","12:EP400:131950036:SFSWAP:131786463:rev:+"]
["TCGA_SARC","TCGA-WK-A8XX-01A","MPDU1--AC113189.2","17:MPDU1:7583965:AC113189.2:7420627:rev:+"]
["TCGA_SARC","TCGA-WK-A8XX-01A","ZMYM2--MPHOSPH8","13:ZMYM2:19960026:MPHOSPH8:19642115:rev:+"]
["TCGA_SARC","TCGA-WK-A8XY-01A","INTS3--CHTOP","1:INTS3:153757763:CHTOP:153642243:rev:+"]
["TCGA_SARC","TCGA-WP-A9GB-01A","CLPTM1--NECTIN2","19:CLPTM1:44955467:NECTIN2:44865271:rev:+"]
["TCGA_SARC","TCGA-X2-A95T-01A","LINC01850--FMNL2","2:LINC01850:153337780:FMNL2:152617091:rev:+"]
["TCGA_SARC","TCGA-X6-A7WC-01A","MEF2A--LRRC28","15:MEF2A:99566104:LRRC28:99386030:rev:+"]
["TCGA_SARC","TCGA-X6-A7WC-01A","NEURL4--SOX15","17:NEURL4:7326255:SOX15:7589738:rev:-"]
["TCGA_SARC","TCGA-X6-A8C6-01A","LAMB1--NRCAM","7:LAMB1:107986022:NRCAM:108160492:rev:-"]
["TCGA_SARC","TCGA-Z4-AAPG-01A","NFX1--B4GALT1-AS1","9:NFX1:33319127:B4GALT1-AS1:33177420:rev:+"]
["TCGA_SKCM","TCGA-BF-A1Q0-01","NSMCE1--IL4R","16:NSMCE1:27257435:-:16:IL4R:27355808:+:strandcross"]
["TCGA_SKCM","TCGA-BF-A1Q0-01","IL4R--NSMCE1","16:IL4R:27313817:+:16:NSMCE1:27235299:-:strandcross"]
["TCGA_SKCM","TCGA-BF-A5EP-01","BRAF--ATG7","7:BRAF:140807960:-:3:ATG7:11510185:+:fusion"]
["TCGA_SKCM","TCGA-D3-A1Q3-06","OXCT1--GHR","5:OXCT1:41840451:-:5:GHR:42565864:+:strandcross"]
["TCGA_SKCM","TCGA-D3-A1Q4-06","WWP1--ESRP1","8:WWP1:86342930:+:8:ESRP1:94662501:+:reg"]
["TCGA_SKCM","TCGA-D3-A2JA-06","SHC2--PTEN","19:SHC2:438718:-:10:PTEN:87925513:+:fusion"]
["TCGA_SKCM","TCGA-D3-A2JB-06","CTNND1--PACS1","11:CTNND1:57762046:+:11:PACS1:66193486:+:reg"]
["TCGA_SKCM","TCGA-D3-A2JC-06","TAX1BP1--BRAF","7:TAX1BP1:27787603:+:7:BRAF:140781693:-:strandcross"]
["TCGA_SKCM","TCGA-D3-A2JC-06","MYO10--C5orf38","5:MYO10:16877609:-:5:C5orf38:2755029:+:strandcross"]
["TCGA_SKCM","TCGA-D3-A2JH-06","ERBIN--TMEM232","5:ERBIN:66054951:+:5:TMEM232:110424916:-:strandcross"]
["TCGA_SKCM","TCGA-D3-A3BZ-06","MPRIP--TRAT1","17:MPRIP:17078076:+:3:TRAT1:108830670:+:fusion"]
["TCGA_SKCM","TCGA-D3-A3C1-06","PCBP2--HMGA2","12:PCBP2:53452376:+:12:HMGA2:65828001:+:reg"]
["TCGA_SKCM","TCGA-D3-A3C1-06","KMT2C--LHFPL3","7:KMT2C:152435626:-:7:LHFPL3:104736675:+:strandcross"]
["TCGA_SKCM","TCGA-D3-A3CC-06","PARP11--MDM2","12:PARP11:3863836:-:12:MDM2:68835829:+:strandcross"]
["TCGA_SKCM","TCGA-D3-A3CC-06","AEBP2--PRLR","12:AEBP2:19493986:+:5:PRLR:35118122:-:fusion"]
["TCGA_SKCM","TCGA-D3-A3CF-06","LBH--FLT4","2:LBH:30234507:+:5:FLT4:180631778:-:fusion"]
["TCGA_SKCM","TCGA-D3-A3CF-06","ITSN2--KIDINS220","2:ITSN2:24275713:-:2:KIDINS220:8786357:-:reg"]
["TCGA_SKCM","TCGA-D3-A3MO-06","LRP12--RALGPS1","8:LRP12:104531907:-:9:RALGPS1:126962225:+:fusion"]
["TCGA_SKCM","TCGA-D3-A51N-06","G3BP1--PDE4D","5:G3BP1:151791062:+:5:PDE4D:59988717:-:strandcross"]
["TCGA_SKCM","TCGA-D3-A5GR-06","KATNAL1--CUL4A","13:KATNAL1:30283616:-:13:CUL4A:113253082:+:strandcross"]
["TCGA_SKCM","TCGA-D3-A5GR-06","TDRD3--CUL4A","13:TDRD3:60397010:+:13:CUL4A:113253082:+:reg"]
["TCGA_SKCM","TCGA-D9-A149-06","YWHAG--OPA3","7:YWHAG:76358722:-:19:OPA3:45529456:-:fusion"]
["TCGA_SKCM","TCGA-D9-A4Z5-01","UBE2E3--TECPR2","2:UBE2E3:180984093:+:14:TECPR2:102496979:+:fusion"]
["TCGA_SKCM","TCGA-DA-A1I0-06","TNPO2--NFIX","19:TNPO2:12722477:-:19:NFIX:13073047:+:strandcross"]
["TCGA_SKCM","TCGA-DA-A1I2-06","AP2B1--PPM1E","17:AP2B1:35710320:+:17:PPM1E:58955649:+:reg"]
["TCGA_SKCM","TCGA-DA-A3F3-06","COL4A3BP--ELOVL7","5:COL4A3BP:75505982:-:5:ELOVL7:60787431:-:reg"]
["TCGA_SKCM","TCGA-EB-A24D-01","SPTAN1--MAPKAP1","9:SPTAN1:128591625:+:9:MAPKAP1:125506417:-:strandcross"]
["TCGA_SKCM","TCGA-EB-A430-01","DDR2--FMO4","1:DDR2:162655374:+:1:FMO4:171319818:+:reg"]
["TCGA_SKCM","TCGA-EB-A44Q-06","MYO10--FAM186A","5:MYO10:16818009:-:12:FAM186A:50334103:-:fusion"]
["TCGA_SKCM","TCGA-EB-A4IQ-01","PLAT--C12orf66","8:PLAT:42207494:-:12:C12orf66:64215963:-:fusion"]
["TCGA_SKCM","TCGA-EB-A4IQ-01","ROBO1--SEMA5B","3:ROBO1:78639744:-:3:SEMA5B:122915890:-:rev"]
["TCGA_SKCM","TCGA-EB-A4XL-01","EPB41--ITPR1","1:EPB41:29109437:+:3:ITPR1:4733088:+:fusion"]
["TCGA_SKCM","TCGA-EE-A181-06","AKAP6--PRKD1","14:AKAP6:32600792:+:14:PRKD1:29626556:-:strandcross"]
["TCGA_SKCM","TCGA-EE-A20H-06","NPHP4--CDKN2A","1:NPHP4:5986155:-:9:CDKN2A:21971208:-:fusion"]
["TCGA_SKCM","TCGA-EE-A20I-06","LMBRD2--CTNND2","5:LMBRD2:36108534:-:5:CTNND2:11364890:-:reg"]
["TCGA_SKCM","TCGA-EE-A29D-06","MARK1--RHOU","1:MARK1:220653352:+:1:RHOU:228737673:+:reg"]
["TCGA_SKCM","TCGA-EE-A2GL-06","HIVEP3--C1orf168","1:HIVEP3:41918413:-:1:C1orf168:56767938:-:rev"]
["TCGA_SKCM","TCGA-EE-A2GP-06","ATP1A1--ATG4C","1:ATP1A1:116373523:+:1:ATG4C:62863992:+:rev"]
["TCGA_SKCM","TCGA-EE-A2GR-06","ARRB1--PRCP","11:ARRB1:75351588:-:11:PRCP:82839425:-:rev"]
["TCGA_SKCM","TCGA-EE-A2GU-06","TP53--CHD3","17:TP53:7687377:-:17:CHD3:7895339:+:strandcross"]
["TCGA_SKCM","TCGA-EE-A2M7-06","RNF145--PDE4D","5:RNF145:159168873:-:5:PDE4D:59215968:-:reg"]
["TCGA_SKCM","TCGA-EE-A2M7-06","GRIA1--RAD17","5:GRIA1:153706067:+:5:RAD17:69381901:+:rev"]
["TCGA_SKCM","TCGA-EE-A2M8-06","SCP2--STXBP3","1:SCP2:53015043:+:1:STXBP3:108793582:+:reg"]
["TCGA_SKCM","TCGA-EE-A2MI-06","TRAK1--RAF1","3:TRAK1:42193898:+:3:RAF1:12600415:-:strandcross"]
["TCGA_SKCM","TCGA-EE-A2MI-06","RAF1--TRAK1","3:RAF1:12604136:-:3:TRAK1:42194804:+:strandcross"]
["TCGA_SKCM","TCGA-EE-A2MS-06","SH3KBP1--VSIG1","X:SH3KBP1:19836125:-:X:VSIG1:108058038:+:strandcross"]
["TCGA_SKCM","TCGA-EE-A3AH-06","KIFAP3--COPA","1:KIFAP3:169954011:-:1:COPA:160313167:-:reg"]
["TCGA_SKCM","TCGA-ER-A197-06","ZEB2--AKT3","2:ZEB2:144424796:-:1:AKT3:243545597:-:fusion"]
["TCGA_SKCM","TCGA-ER-A197-06","RAP1B--SNUPN","12:RAP1B:68611043:+:15:SNUPN:75605227:-:fusion"]
["TCGA_SKCM","TCGA-ER-A19N-06","SPAG9--RDX","17:SPAG9:51079584:-:11:RDX:110232033:-:fusion"]
["TCGA_SKCM","TCGA-ER-A19T-01","FBL--RYR1","19:FBL:39846291:-:19:RYR1:38564959:+:strandcross"]
["TCGA_SKCM","TCGA-ER-A19T-01","UBAC1--SHANK2","9:UBAC1:135961025:-:11:SHANK2:71224796:-:fusion"]
["TCGA_SKCM","TCGA-ER-A19W-06","MYO5A--TRPM1","15:MYO5A:52405287:-:15:TRPM1:31042243:-:reg"]
["TCGA_SKCM","TCGA-FR-A3YN-06","KIRREL--CD48","1:KIRREL:157993728:+:1:CD48:160685189:-:strandcross"]
["TCGA_SKCM","TCGA-FR-A3YO-06","ANKRD11--BRMS1","16:ANKRD11:89418284:-:11:BRMS1:66340870:-:fusion"]
["TCGA_SKCM","TCGA-FR-A3YO-06","UBASH3B--GRIK4","11:UBASH3B:122656210:+:11:GRIK4:120952855:+:rev"]
["TCGA_SKCM","TCGA-FS-A1YW-06","TTYH3--MAD1L1","7:TTYH3:2647022:+:7:MAD1L1:1936897:-:strandcross"]
["TCGA_SKCM","TCGA-FS-A1Z4-06","ODF2L--F8","1:ODF2L:86396033:-:X:F8:154931676:-:fusion"]
["TCGA_SKCM","TCGA-FS-A1ZD-06","SH3D19--INPP4B","4:SH3D19:151226047:-:4:INPP4B:142431385:-:reg"]
["TCGA_SKCM","TCGA-FS-A1ZK-06","GRAP2--BRD1","22:GRAP2:39969533:+:22:BRD1:49799119:-:strandcross"]
["TCGA_SKCM","TCGA-FS-A1ZK-06","PTK2--TRAPPC9","8:PTK2:140925661:-:8:TRAPPC9:139732202:-:reg"]
["TCGA_SKCM","TCGA-FS-A1ZQ-06","RAF1--AGGF1","3:RAF1:12604136:-:5:AGGF1:77046347:+:fusion"]
["TCGA_SKCM","TCGA-FS-A1ZT-06","RSF1--ARRB1","11:RSF1:77672042:-:11:ARRB1:75290039:-:reg"]
["TCGA_SKCM","TCGA-FS-A1ZZ-06","OXSR1--ATXN7","3:OXSR1:38190839:+:3:ATXN7:63952379:+:reg"]
["TCGA_SKCM","TCGA-FS-A1ZZ-06","AHR--CUL4B","7:AHR:17299329:+:X:CUL4B:120560625:-:fusion"]
["TCGA_SKCM","TCGA-FS-A4F4-06","NAV2--ERC1","11:NAV2:19892594:+:12:ERC1:1480843:+:fusion"]
["TCGA_SKCM","TCGA-FS-A4F4-06","EP300--FBLN1","22:EP300:41155113:+:22:FBLN1:45600307:+:reg"]
["TCGA_SKCM","TCGA-FS-A4F4-06","FAM109B--RAI14","22:FAM109B:42075652:+:5:RAI14:34686872:+:fusion"]
["TCGA_SKCM","TCGA-FS-A4F4-06","TRIO--SLC9A3","5:TRIO:14394130:+:5:SLC9A3:492071:-:strandcross"]
["TCGA_SKCM","TCGA-FS-A4F4-06","TBC1D22A--SREBF2","22:TBC1D22A:46912188:+:22:SREBF2:41866831:+:rev"]
["TCGA_SKCM","TCGA-FW-A3I3-06","SERINC5--MYO10","5:SERINC5:80202886:-:5:MYO10:16704685:-:reg"]
["TCGA_SKCM","TCGA-FW-A3TU-06","MPRIP--P4HA1","17:MPRIP:17042971:+:10:P4HA1:73030370:-:fusion"]
["TCGA_SKCM","TCGA-FW-A3TV-06","GIT2--SMYD5","12:GIT2:109991627:-:2:SMYD5:73218861:+:fusion"]
["TCGA_SKCM","TCGA-GN-A264-06","PRPF4B--F13A1","6:PRPF4B:4021466:+:6:F13A1:6197326:-:strandcross"]
["TCGA_SKCM","TCGA-GN-A268-06","PAK1IP1--MEP1A","6:PAK1IP1:10702639:+:6:MEP1A:46819529:+:reg"]
["TCGA_SKCM","TCGA-GN-A26C-01","NCOA2--ST18","8:NCOA2:70296744:-:8:ST18:52246664:-:reg"]
["TCGA_SKCM","TCGA-GN-A26D-06","TBK1--GRIP1","12:TBK1:64455957:+:12:GRIP1:66465422:-:strandcross"]
["TCGA_SKCM","TCGA-GN-A26D-06","NARS2--PAK1","11:NARS2:78528842:-:11:PAK1:77392538:-:reg"]
["TCGA_SKCM","TCGA-GN-A26D-06","YAP1--TTC12","11:YAP1:102227581:+:11:TTC12:113368187:+:reg"]
["TCGA_SKCM","TCGA-D3-A2J6-06","ITCH--RALY","20:ITCH:34393881:RALY:34031522:rev:+"]
["TCGA_SKCM","TCGA-D3-A3C1-06","RPF1--PRKACB","1:RPF1:84479509:PRKACB:84235180:rev:+"]
["TCGA_SKCM","TCGA-EE-A20B-06","AKAP8L--WIZ","19:AKAP8L:15410520:WIZ:15431182:rev:-"]
["TCGA_SKCM","TCGA-EE-A29D-06","TRIM44--CD44","11:TRIM44:35735445:CD44:35176575:rev:+"]
["TCGA_SKCM","TCGA-EE-A29D-06","DYNC1H1--PPP2R5C","14:DYNC1H1:101991673:PPP2R5C:101856686:rev:+"]
["TCGA_SKCM","TCGA-EE-A2GR-06","TATDN2--IRAK2","3:TATDN2:10271015:IRAK2:10238748:rev:+"]
["TCGA_SKCM","TCGA-EE-A2MS-06","LYST--NID1","1:LYST:235787200:NID1:236048989:rev:-"]
["TCGA_SKCM","TCGA-ER-A19H-06","RPS6KB1--VMP1","17:RPS6KB1:59893325:VMP1:59808796:rev:+"]
["TCGA_SKCM","TCGA-ER-A19T-01","SHC2--RNF126","19:SHC2:460529:RNF126:652884:rev:-"]
["TCGA_SKCM","TCGA-FS-A1Z4-06","TRIM2--ARFIP1","4:TRIM2:153152612:ARFIP1:152863606:rev:+"]
["TCGA_SKCM","TCGA-FS-A1ZD-06","CEP170--AKT3","1:CEP170:243185779:AKT3:243573048:rev:-"]
["TCGA_SKCM","TCGA-FS-A1ZD-06","INPP5F--GRK5","10:INPP5F:119726359:GRK5:119380815:rev:+"]
["TCGA_SKCM","TCGA-FS-A1ZE-06","VPS13D--TNFRSF1B","1:VPS13D:12416827:TNFRSF1B:12192431:rev:+"]
["TCGA_SKCM","TCGA-GN-A265-06","MIER2--SHC2","19:MIER2:311845:SHC2:425231:rev:-"]
["TCGA_STAD","TCGA-BR-4357","MRPL37--MASP2","1:MRPL37:54200589:+:1:MASP2:11037811:-:strandcross"]
["TCGA_STAD","TCGA-BR-4357","ASH1L--SLC28A3","1:ASH1L:155562153:-:9:SLC28A3:84294275:-:fusion"]
["TCGA_STAD","TCGA-BR-4369","CLIP1--TNIK","12:CLIP1:122377389:-:3:TNIK:171190787:-:fusion"]
["TCGA_STAD","TCGA-CD-5799","PGAP3--STARD3","17:PGAP3:39684597:-:17:STARD3:39660211:+:strandcross"]
["TCGA_STAD","TCGA-CG-4301","SAMD12--COL14A1","8:SAMD12:118621804:-:8:COL14A1:120196791:+:strandcross"]
["TCGA_STAD","TCGA-CG-4443","MCF2L--LAMA5","13:MCF2L:113024758:+:20:LAMA5:62347028:-:fusion"]
["TCGA_STAD","TCGA-D7-6521","PHF14--MEOX2","7:PHF14:10990847:+:7:MEOX2:15612611:-:strandcross"]
["TCGA_STAD","TCGA-D7-6815","ZKSCAN4--SLC44A4","6:ZKSCAN4:28248067:-:6:SLC44A4:31866126:-:rev"]
["TCGA_STAD","TCGA-D7-6822","CTBP2--CTNNB1","10:CTBP2:125110990:-:3:CTNNB1:41224021:+:fusion"]
["TCGA_THCA","TCGA-BJ-A0YZ-01A","PPARG--PAX8","3:PPARG:12312453:+:2:PAX8:113227256:-:fusion"]
["TCGA_THCA","TCGA-BJ-A0YZ-01A","PAX8--PPARG","2:PAX8:113236601:-:3:PPARG:12379704:+:fusion"]
["TCGA_THCA","TCGA-BJ-A0Z0-01A","FGFR2--OFD1","10:FGFR2:121483698:-:X:OFD1:13736478:+:fusion"]
["TCGA_THCA","TCGA-BJ-A0ZJ-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-BJ-A28Z-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-CE-A13K-01A","CCDC6--RET","10:CCDC6:59794473:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-CE-A27D-01A","ETV6--NTRK3","12:ETV6:11853561:+:15:NTRK3:88033045:-:fusion"]
["TCGA_THCA","TCGA-CE-A3MD-01A","SSBP2--NTRK1","5:SSBP2:81446868:-:1:NTRK1:156875520:+:fusion"]
["TCGA_THCA","TCGA-CE-A482-01A","NCOA4--RET","10:NCOA4:46012883:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-CE-A485-01A","SPECC1L--RET","22:SPECC1L:24338477:+:10:RET:43116584:+:fusion"]
["TCGA_THCA","TCGA-DE-A0Y2-01A","MACF1--BRAF","1:MACF1:39430908:+:7:BRAF:140787584:-:fusion"]
["TCGA_THCA","TCGA-DE-A0Y2-01A","BRAF--MACF1","7:BRAF:140794308:-:1:MACF1:39432535:+:fusion"]
["TCGA_THCA","TCGA-DE-A3KN-01A","NCOA4--RET","10:NCOA4:46012883:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-DE-A4M9-01A","PPARG--PAX8","3:PPARG:12287675:+:2:PAX8:113227256:-:fusion"]
["TCGA_THCA","TCGA-DE-A4M9-01A","PAX8--PPARG","2:PAX8:113235394:-:3:PPARG:12379704:+:fusion"]
["TCGA_THCA","TCGA-DJ-A1QL-01A","TG--THADA","8:TG:132972741:+:2:THADA:43293213:-:fusion"]
["TCGA_THCA","TCGA-DJ-A2PX-01A","BRAF--AGK","7:BRAF:140800362:-:7:AGK:141593146:+:strandcross"]
["TCGA_THCA","TCGA-DJ-A3US-01A","STRN--ALK","2:STRN:36916078:-:2:ALK:29223528:-:reg"]
["TCGA_THCA","TCGA-DJ-A4UP-01A","IRF2BP2--NTRK1","1:IRF2BP2:234608447:-:1:NTRK1:156874571:+:strandcross"]
["TCGA_THCA","TCGA-DJ-A4UT-01A","MALAT1--ALK","11:MALAT1:65502393:+:2:ALK:29229066:-:fusion"]
["TCGA_THCA","TCGA-DJ-A4V0-01A","ETV6--NTRK3","12:ETV6:11853561:+:15:NTRK3:88033045:-:fusion"]
["TCGA_THCA","TCGA-DJ-A4V5-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-DO-A1JZ-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-E3-A3E0-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-E8-A44M-01A","RET--ANK3","10:RET:43109230:+:10:ANK3:60029826:-:strandcross"]
["TCGA_THCA","TCGA-EL-A3H3-01A","NCOA4--RET","10:NCOA4:46012883:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-EL-A3T0-01A","BRAF--AP3B1","7:BRAF:140794308:-:5:AP3B1:78039274:-:fusion"]
["TCGA_THCA","TCGA-EL-A3T0-01A","AP3B1--BRAF","5:AP3B1:78089393:-:7:BRAF:140787584:-:fusion"]
["TCGA_THCA","TCGA-EL-A3T9-01A","ERC1--RET","12:ERC1:1236904:+:10:RET:43116584:+:fusion"]
["TCGA_THCA","TCGA-EL-A3TB-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-EL-A3ZK-01A","BRAF--SND1","7:BRAF:140787548:-:7:SND1:128084724:+:strandcross"]
["TCGA_THCA","TCGA-EL-A3ZN-01A","ETV6--NTRK3","12:ETV6:11853561:+:15:NTRK3:88033045:-:fusion"]
["TCGA_THCA","TCGA-EL-A4KD-01A","GTF2IRD1--ALK","7:GTF2IRD1:74521297:+:2:ALK:29223528:-:fusion"]
["TCGA_THCA","TCGA-EM-A2CU-01A","NCOA4--RET","10:NCOA4:46012883:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-EM-A3AJ-01A","PPARG--PAX8","3:PPARG:12312453:+:2:PAX8:113227256:-:fusion"]
["TCGA_THCA","TCGA-EM-A3AJ-01A","PAX8--PPARG","2:PAX8:113235394:-:3:PPARG:12379704:+:fusion"]
["TCGA_THCA","TCGA-EM-A3AO-01A","TFG--NTRK1","3:TFG:100736704:+:1:NTRK1:156874571:+:fusion"]
["TCGA_THCA","TCGA-EM-A3FP-01A","VCL--FGFR2","10:VCL:73998375:+:10:FGFR2:121480021:-:strandcross"]
["TCGA_THCA","TCGA-EM-A3FQ-01A","ERC1--RET","12:ERC1:1444750:+:10:RET:43116584:+:fusion"]
["TCGA_THCA","TCGA-ET-A39L-01A","RBPMS--NTRK3","8:RBPMS:30504436:+:15:NTRK3:88033045:-:fusion"]
["TCGA_THCA","TCGA-ET-A39L-01A","NTRK3--RBPMS","15:NTRK3:88126271:-:8:RBPMS:30544494:+:fusion"]
["TCGA_THCA","TCGA-ET-A39N-01A","PAX8--PPARG","2:PAX8:113235394:-:3:PPARG:12379704:+:fusion"]
["TCGA_THCA","TCGA-ET-A3BN-01A","FAM114A2--BRAF","5:FAM114A2:154011241:-:7:BRAF:140781693:-:fusion"]
["TCGA_THCA","TCGA-ET-A3BN-01A","BRAF--FAM114A2","7:BRAF:140783021:-:5:FAM114A2:154002969:-:fusion"]
["TCGA_THCA","TCGA-ET-A3DR-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-ET-A40S-01A","SQSTM1--NTRK1","5:SQSTM1:179825226:+:1:NTRK1:156874571:+:fusion"]
["TCGA_THCA","TCGA-FE-A3PD-01A","ETV6--NTRK3","12:ETV6:11853561:+:15:NTRK3:88033045:-:fusion"]
["TCGA_THCA","TCGA-FK-A3S3-01A","TFG--MET","3:TFG:100732672:+:7:MET:116774881:+:fusion"]
["TCGA_THCA","TCGA-FK-A3S3-01A","MET--TFG","7:MET:116771989:+:3:TFG:100736576:+:fusion"]
["TCGA_THCA","TCGA-FK-A3SE-01A","CCDC6--RET","10:CCDC6:59906122:-:10:RET:43116584:+:strandcross"]
["TCGA_THCA","TCGA-FK-A3SG-01A","AKAP13--RET","15:AKAP13:85741495:+:10:RET:43116584:+:fusion"]
["TCGA_THCA","TCGA-FY-A3R6-01A","UACA--LTK","15:UACA:70664662:-:15:LTK:41507174:-:reg"]

{"sheet":"DEEPEST-Fusion_GTEx_fusions","index":5,"n_rows":341,"n_cols":5,"rows_kept":341,"cut":false,"hidden":false,"merged":[]}
["This sheet shows the fusions found by DEEPEST-Fusion on GTEx samples"]
["Sample","fusion","GTEx_tissue","gene1","gene2"]
["SRR663585","RB1--ITM2B","GTEx_BLOOD","RB1","ITM2B"]
["SRR663585","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR663585","FOSL2--BABAM2","GTEx_BLOOD","FOSL2","BABAM2"]
["SRR663717","SCRIB--SHARPIN","GTEx_BLOOD","SCRIB","SHARPIN"]
["SRR663898","RB1--ITM2B","GTEx_BLOOD","RB1","ITM2B"]
["SRR807637","NCOR2--UBC","GTEx_BLOOD","NCOR2","UBC"]
["SRR808520","KPNA1--HSPBAP1","GTEx_BLOOD","KPNA1","HSPBAP1"]
["SRR808520","AF241728.1--TSPAN7","GTEx_BLOOD","AF241728.1","TSPAN7"]
["SRR809283","NCOR2--UBC","GTEx_BLOOD","NCOR2","UBC"]
["SRR809283","RTN4--PPP4R3B","GTEx_BLOOD","RTN4","PPP4R3B"]
["SRR810391","CSF2RB--NCF4","GTEx_BLOOD","CSF2RB","NCF4"]
["SRR810595","CAMK1D--CDC123","GTEx_BLOOD","CAMK1D","CDC123"]
["SRR810595","CREB5--TAX1BP1","GTEx_BLOOD","CREB5","TAX1BP1"]
["SRR810853","CREB5--TAX1BP1","GTEx_BLOOD","CREB5","TAX1BP1"]
["SRR810945","CHD7--RAB2A","GTEx_BLOOD","CHD7","RAB2A"]
["SRR811049","FCAR--LILRA2","GTEx_BLOOD","FCAR","LILRA2"]
["SRR811379","EEF2--ZBTB7A","GTEx_BLOOD","EEF2","ZBTB7A"]
["SRR811491","ERBIN--NLN","GTEx_BLOOD","ERBIN","NLN"]
["SRR811583","METRNL--SLC16A3","GTEx_BLOOD","METRNL","SLC16A3"]
["SRR811583","CTDP1--NFATC1","GTEx_BLOOD","CTDP1","NFATC1"]
["SRR811583","TFG--ADGRG7","GTEx_BLOOD","TFG","ADGRG7"]
["SRR812177","RB1--ITM2B","GTEx_BLOOD","RB1","ITM2B"]
["SRR812177","GGA3--GRB2","GTEx_BLOOD","GGA3","GRB2"]
["SRR812461","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR812461","DISC1--GNPAT","GTEx_BLOOD","DISC1","GNPAT"]
["SRR812461","AGFG1--MFF","GTEx_BLOOD","AGFG1","MFF"]
["SRR812970","NCOR2--UBC","GTEx_BLOOD","NCOR2","UBC"]
["SRR812970","NCOR2--UBC","GTEx_BLOOD","NCOR2","UBC"]
["SRR812970","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR812970","OAZ1--DOT1L","GTEx_BLOOD","OAZ1","DOT1L"]
["SRR812970","OAZ1--DOT1L","GTEx_BLOOD","OAZ1","DOT1L"]
["SRR813339","RAB18--MASTL","GTEx_BLOOD","RAB18","MASTL"]
["SRR813339","ZFAS1--CSE1L","GTEx_BLOOD","ZFAS1","CSE1L"]
["SRR813339","ZFAS1--CSE1L","GTEx_BLOOD","ZFAS1","CSE1L"]
["SRR813339","ADAP1--ZFAND2A","GTEx_BLOOD","ADAP1","ZFAND2A"]
["SRR813339","MKRN1--BRAF","GTEx_BLOOD","MKRN1","BRAF"]
["SRR813935","NCOR2--UBC","GTEx_BLOOD","NCOR2","UBC"]
["SRR813935","IL6R--UBAP2L","GTEx_BLOOD","IL6R","UBAP2L"]
["SRR814317","FBRSL1--NOC4L","GTEx_BLOOD","FBRSL1","NOC4L"]
["SRR814363","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR814363","ELL--FKBP8","GTEx_BLOOD","ELL","FKBP8"]
["SRR814844","SAMD8--ADK","GTEx_BLOOD","SAMD8","ADK"]
["SRR814844","CREB5--TAX1BP1","GTEx_BLOOD","CREB5","TAX1BP1"]
["SRR814868","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR814868","TGIF1--MYL12A","GTEx_BLOOD","TGIF1","MYL12A"]
["SRR816250","LILRA6--LILRB2","GTEx_BLOOD","LILRA6","LILRB2"]
["SRR816589","IL18RAP--IL1R2","GTEx_BLOOD","IL18RAP","IL1R2"]
["SRR816589","ARHGAP26--NDFIP1","GTEx_BLOOD","ARHGAP26","NDFIP1"]
["SRR816745","KIF1B--UBE4B","GTEx_BLOOD","KIF1B","UBE4B"]
["SRR816920","CASP1--CARD16","GTEx_BLOOD","CASP1","CARD16"]
["SRR817046","INPP5A--PWWP2B","GTEx_BLOOD","INPP5A","PWWP2B"]
["SRR817373","ZNF230--ZNF155","GTEx_BLOOD","ZNF230","ZNF155"]
["SRR817444","LYPLAL1--RRP15","GTEx_BLOOD","LYPLAL1","RRP15"]
["SRR817444","CREBRF--ERGIC1","GTEx_BLOOD","CREBRF","ERGIC1"]
["SRR818537","CAMK1D--SEC61A2","GTEx_BLOOD","CAMK1D","SEC61A2"]
["SRR819024","HPN--GRAMD1A","GTEx_BLOOD","HPN","GRAMD1A"]
["SRR819024","WDR78--SERBP1","GTEx_BLOOD","WDR78","SERBP1"]
["SRR819024","GUSBP11--AP000347.1","GTEx_BLOOD","GUSBP11","AP000347.1"]
["SRR819024","AUH--NFIL3","GTEx_BLOOD","AUH","NFIL3"]
["SRR819164","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR820779","SQOR--B2M","GTEx_BLOOD","SQOR","B2M"]
["SRR821326","ZNF442--MAN2B1","GTEx_BLOOD","ZNF442","MAN2B1"]
["SRR1324371","AC010326.2--ZNF329","GTEx_BRAIN","AC010326.2","ZNF329"]
["SRR1328960","AC025263.2--RAB3IP","GTEx_BRAIN","AC025263.2","RAB3IP"]
["SRR1334564","ZNF544--AC008969.1","GTEx_BRAIN","ZNF544","AC008969.1"]
["SRR1335400","C15orf57--RMDN3","GTEx_BRAIN","C15orf57","RMDN3"]
["SRR1337864","KCNQ5--RIMS1","GTEx_BRAIN","KCNQ5","RIMS1"]
["SRR1341702","LINC01237--ATG4B","GTEx_BRAIN","LINC01237","ATG4B"]
["SRR1354734","NDUFC2-KCTD14--NDUFC2","GTEx_BRAIN","NDUFC2-KCTD14","NDUFC2"]
["SRR1364676","FRAS1--MRPL1","GTEx_BRAIN","FRAS1","MRPL1"]
["SRR1375976","DAAM1--KIAA0586","GTEx_BRAIN","DAAM1","KIAA0586"]
["SRR1396595","PDE10A--SFT2D1","GTEx_BRAIN","PDE10A","SFT2D1"]
["SRR1396640","POLR2F--CDC42EP1","GTEx_BRAIN","POLR2F","CDC42EP1"]
["SRR1396640","TFG--ADGRG7","GTEx_BRAIN","TFG","ADGRG7"]
["SRR1401424","SNHG14--SNURF","GTEx_BRAIN","SNHG14","SNURF"]
["SRR1401424","PDGFA--PRKAR1B","GTEx_BRAIN","PDGFA","PRKAR1B"]
["SRR1433088","EHBP1--COMMD1","GTEx_BRAIN","EHBP1","COMMD1"]
["SRR1439807","HSF1--MROH1","GTEx_BRAIN","HSF1","MROH1"]
["SRR1459441","KAZN--PRDM2","GTEx_BRAIN","KAZN","PRDM2"]
["SRR1486097","SNURF--SNRPN","GTEx_BRAIN","SNURF","SNRPN"]
["SRR1498861","CAMK1D--CDC123","GTEx_BRAIN","CAMK1D","CDC123"]
["SRR5125346","PAIP2--MATR3","GTEx_BRAIN","PAIP2","MATR3"]
["SRR5125347","PAIP2--MATR3","GTEx_BRAIN","PAIP2","MATR3"]
["SRR601006","AL049544.1--KHDRBS2","GTEx_BRAIN","AL049544.1","KHDRBS2"]
["SRR601669","TRAPPC10--PKNOX1","GTEx_BRAIN","TRAPPC10","PKNOX1"]
["SRR627449","SLC22A9--SLC22A10","GTEx_BRAIN","SLC22A9","SLC22A10"]
["SRR627449","AL137247.1--N4BP2L2","GTEx_BRAIN","AL137247.1","N4BP2L2"]
["SRR627449","LMO7--AL137782.1","GTEx_BRAIN","LMO7","AL137782.1"]
["SRR627449","AL590132.1--KCNH1","GTEx_BRAIN","AL590132.1","KCNH1"]
["SRR627449","AL008723.1--SLC5A4-AS1","GTEx_BRAIN","AL008723.1","SLC5A4-AS1"]
["SRR627449","AC079447.1--MRPL30","GTEx_BRAIN","AC079447.1","MRPL30"]
["SRR627449","ACAD11--NPHP3-ACAD11","GTEx_BRAIN","ACAD11","NPHP3-ACAD11"]
["SRR627449","AC008695.1--RAPGEF6","GTEx_BRAIN","AC008695.1","RAPGEF6"]
["SRR627449","AC006978.2--ZNRF2","GTEx_BRAIN","AC006978.2","ZNRF2"]
["SRR627449","AL353150.1--SHC3","GTEx_BRAIN","AL353150.1","SHC3"]
["SRR627455","SERGEF--AC055860.1","GTEx_BRAIN","SERGEF","AC055860.1"]
["SRR627455","SLC22A9--SLC22A10","GTEx_BRAIN","SLC22A9","SLC22A10"]
["SRR627455","AC025263.2--RAB3IP","GTEx_BRAIN","AC025263.2","RAB3IP"]
["SRR627455","ADAMTSL3--SH3GL3","GTEx_BRAIN","ADAMTSL3","SH3GL3"]
["SRR627455","AL590132.1--KCNH1","GTEx_BRAIN","AL590132.1","KCNH1"]
["SRR627455","KCNH1--AL590132.1","GTEx_BRAIN","KCNH1","AL590132.1"]
["SRR627455","TMEM56-RWDD3--TMEM56","GTEx_BRAIN","TMEM56-RWDD3","TMEM56"]
["SRR627455","AF127577.4--NRIP1","GTEx_BRAIN","AF127577.4","NRIP1"]
["SRR627455","AL008723.1--SLC5A4-AS1","GTEx_BRAIN","AL008723.1","SLC5A4-AS1"]
["SRR627455","C6orf163--SMIM8","GTEx_BRAIN","C6orf163","SMIM8"]
["SRR627455","AC092647.5--ZNF713","GTEx_BRAIN","AC092647.5","ZNF713"]
["SRR656745","SERGEF--AC055860.1","GTEx_BRAIN","SERGEF","AC055860.1"]
["SRR656745","CLDN12--GTPBP10","GTEx_BRAIN","CLDN12","GTPBP10"]
["SRR656745","DENND1A--PSMB7","GTEx_BRAIN","DENND1A","PSMB7"]
["SRR659555","PPP5D1--AP2S1","GTEx_BRAIN","PPP5D1","AP2S1"]
["SRR659555","AL008723.1--SLC5A4-AS1","GTEx_BRAIN","AL008723.1","SLC5A4-AS1"]
["SRR659555","SPTBN1--ACYP2","GTEx_BRAIN","SPTBN1","ACYP2"]
["SRR660626","SUPT16H--CHD8","GTEx_BRAIN","SUPT16H","CHD8"]
["SRR660626","AC124312.1--SNRPN","GTEx_BRAIN","AC124312.1","SNRPN"]
["SRR660626","RARB--AC092422.1","GTEx_BRAIN","RARB","AC092422.1"]
["SRR660933","AL049544.1--KHDRBS2","GTEx_BRAIN","AL049544.1","KHDRBS2"]
["SRR663320","CBR4--SH3RF1","GTEx_BRAIN","CBR4","SH3RF1"]
["SRR663753","NETO2--ITFG1","GTEx_BRAIN","NETO2","ITFG1"]
["SRR663753","SOCS5--PRKCE","GTEx_BRAIN","SOCS5","PRKCE"]
["SRR663753","GRIA2--GLRB","GTEx_BRAIN","GRIA2","GLRB"]
["SRR664854","KCNMB4--CNOT2","GTEx_BRAIN","KCNMB4","CNOT2"]
["SRR808614","WDR20--DYNC1H1","GTEx_BRAIN","WDR20","DYNC1H1"]
["SRR808614","SNHG14--SNURF","GTEx_BRAIN","SNHG14","SNURF"]
["SRR808614","PLEC--CYHR1","GTEx_BRAIN","PLEC","CYHR1"]
["SRR810319","SUPV3L1--CCAR1","GTEx_BRAIN","SUPV3L1","CCAR1"]
["SRR810877","SUSD6--GALNT16","GTEx_BRAIN","SUSD6","GALNT16"]
["SRR812012","COPS7B--PSMD1","GTEx_BRAIN","COPS7B","PSMD1"]
["SRR812436","AC068205.2--AC068205.1","GTEx_BRAIN","AC068205.2","AC068205.1"]
["SRR812436","DLG1--AC132008.2","GTEx_BRAIN","DLG1","AC132008.2"]
["SRR816770","PAIP2--MATR3","GTEx_BRAIN","PAIP2","MATR3"]
["SRR1071475","YWHAE--PITPNA","GTEx_OVARY","YWHAE","PITPNA"]
["SRR1078042","BAZ2A--PTGES3","GTEx_OVARY","BAZ2A","PTGES3"]
["SRR1093601","VPS33A--CLIP1","GTEx_OVARY","VPS33A","CLIP1"]
["SRR1097148","FBXL5--LDB2","GTEx_OVARY","FBXL5","LDB2"]
["SRR1316513","ABCA6--ABCA10","GTEx_OVARY","ABCA6","ABCA10"]
["SRR1336244","TFG--ADGRG7","GTEx_OVARY","TFG","ADGRG7"]
["SRR1350891","NCOR2--UBC","GTEx_OVARY","NCOR2","UBC"]
["SRR1350891","COPS7B--PSMD1","GTEx_OVARY","COPS7B","PSMD1"]
["SRR1356078","SUPV3L1--HNRNPH3","GTEx_OVARY","SUPV3L1","HNRNPH3"]
["SRR1356078","LINC01176--ZNRF2","GTEx_OVARY","LINC01176","ZNRF2"]
["SRR1359428","TNFRSF1B--PLOD1","GTEx_OVARY","TNFRSF1B","PLOD1"]
["SRR1369107","AC006001.2--KCTD7","GTEx_OVARY","AC006001.2","KCTD7"]
["SRR1374432","ZCCHC24--ANXA11","GTEx_OVARY","ZCCHC24","ANXA11"]
["SRR1384210","PVT1--MYC","GTEx_OVARY","PVT1","MYC"]
["SRR1398230","PPT2-EGFL8--MICA","GTEx_OVARY","PPT2-EGFL8","MICA"]
["SRR1413373","TCFL5--DIDO1","GTEx_OVARY","TCFL5","DIDO1"]
["SRR1432934","NCOR2--UBC","GTEx_OVARY","NCOR2","UBC"]
["SRR1451820","FRS2--CPSF6","GTEx_OVARY","FRS2","CPSF6"]
["SRR1454589","MEF2A--SYNM","GTEx_OVARY","MEF2A","SYNM"]
["SRR1454589","FSTL3--CDC34","GTEx_OVARY","FSTL3","CDC34"]
["SRR1466469","LONP2--PHKB","GTEx_OVARY","LONP2","PHKB"]
["SRR1477754","CCDC92--UBC","GTEx_OVARY","CCDC92","UBC"]
["SRR1481106","PELI2--KTN1","GTEx_OVARY","PELI2","KTN1"]
["SRR821072","SCARB1--UBC","GTEx_OVARY","SCARB1","UBC"]
["SRR1324371","AKT3--SDCCAG8","GTEx_BRAIN","AKT3","SDCCAG8"]
["SRR1382732","BCAS1--MBP","GTEx_BRAIN","BCAS1","MBP"]
["SRR603333","ARMCX6--ARMCX4","GTEx_BRAIN","ARMCX6","ARMCX4"]
["SRR663753","PSMG2--SPIRE1","GTEx_BRAIN","PSMG2","SPIRE1"]
["SRR663753","AC005609.5--PCDHA12","GTEx_BRAIN","AC005609.5","PCDHA12"]
["SRR808614","AC092691.1--LSAMP","GTEx_BRAIN","AC092691.1","LSAMP"]
["SRR812012","PSMG2--RHOT1","GTEx_BRAIN","PSMG2","RHOT1"]
["SRR812012","BSG--SHC2","GTEx_BRAIN","BSG","SHC2"]
["SRR663513","NUTM2B-AS1--MINPP1","GTEx_BLOOD","NUTM2B-AS1","MINPP1"]
["SRR663513","AC009119.2--FLJ37035","GTEx_BLOOD","AC009119.2","FLJ37035"]
["SRR663513","EZH1--PDZK1IP1","GTEx_BLOOD","EZH1","PDZK1IP1"]
["SRR663513","RFX2--NOC4L","GTEx_BLOOD","RFX2","NOC4L"]
["SRR663513","XPO7--HBB","GTEx_BLOOD","XPO7","HBB"]
["SRR663585","TUBA1A--ARHGDIB","GTEx_BLOOD","TUBA1A","ARHGDIB"]
["SRR663585","SPESP1--NFIL3","GTEx_BLOOD","SPESP1","NFIL3"]
["SRR663585","CSF3R--SRPK1","GTEx_BLOOD","CSF3R","SRPK1"]
["SRR663585","TNFRSF1B--ELL","GTEx_BLOOD","TNFRSF1B","ELL"]
["SRR663585","HCLS1--CHST15","GTEx_BLOOD","HCLS1","CHST15"]
["SRR663585","RIPOR2--XPR1","GTEx_BLOOD","RIPOR2","XPR1"]
["SRR663585","STAG3L5P-PVRIG2P-PILRB--GATS","GTEx_BLOOD","STAG3L5P-PVRIG2P-PILRB","GATS"]
["SRR663609","UBR5--TMEM71","GTEx_BLOOD","UBR5","TMEM71"]
["SRR663898","HNRNPF--ING1","GTEx_BLOOD","HNRNPF","ING1"]
["SRR663898","AMN1--KIAA1551","GTEx_BLOOD","AMN1","KIAA1551"]
["SRR663898","B2M--GNAS","GTEx_BLOOD","B2M","GNAS"]
["SRR663898","ARSG--NUP160","GTEx_BLOOD","ARSG","NUP160"]
["SRR663898","BSG--R3HDM4","GTEx_BLOOD","BSG","R3HDM4"]
["SRR663898","GPCPD1--C20orf196","GTEx_BLOOD","GPCPD1","C20orf196"]
["SRR663898","EIF4A2--FUS","GTEx_BLOOD","EIF4A2","FUS"]
["SRR663898","PCNP--PLEKHM2","GTEx_BLOOD","PCNP","PLEKHM2"]
["SRR807637","SOD2--RHOA","GTEx_BLOOD","SOD2","RHOA"]
["SRR807637","SLC25A37--UBB","GTEx_BLOOD","SLC25A37","UBB"]
["SRR807637","GDA--LRBA","GTEx_BLOOD","GDA","LRBA"]
["SRR808520","ATP2A3--SLC11A1","GTEx_BLOOD","ATP2A3","SLC11A1"]
["SRR808520","EPS15--SARS","GTEx_BLOOD","EPS15","SARS"]
["SRR808520","S100A9--S100A4","GTEx_BLOOD","S100A9","S100A4"]
["SRR809185","FTH1--SNIP1","GTEx_BLOOD","FTH1","SNIP1"]
["SRR809185","OAZ1--SLC16A3","GTEx_BLOOD","OAZ1","SLC16A3"]
["SRR809185","OAZ1--KLF2","GTEx_BLOOD","OAZ1","KLF2"]
["SRR809185","OAZ1--ACTB","GTEx_BLOOD","OAZ1","ACTB"]
["SRR809185","NADK--GLUL","GTEx_BLOOD","NADK","GLUL"]
["SRR809185","SSBP2--PTP4A1","GTEx_BLOOD","SSBP2","PTP4A1"]
["SRR809283","CSNK1D--FBRSL1","GTEx_BLOOD","CSNK1D","FBRSL1"]
["SRR809283","NARF--ACAP1","GTEx_BLOOD","NARF","ACAP1"]
["SRR809283","NPC1--HNRNPH3","GTEx_BLOOD","NPC1","HNRNPH3"]
["SRR809283","ATXN1--MATK","GTEx_BLOOD","ATXN1","MATK"]
["SRR809283","SOD2--ENGASE","GTEx_BLOOD","SOD2","ENGASE"]
["SRR809283","TMEM248--C17orf62","GTEx_BLOOD","TMEM248","C17orf62"]
["SRR809283","HNRNPK--METRNL","GTEx_BLOOD","HNRNPK","METRNL"]
["SRR809427","ELK3--FUS","GTEx_BLOOD","ELK3","FUS"]
["SRR809427","NAP1L1--PDLIM1","GTEx_BLOOD","NAP1L1","PDLIM1"]
["SRR809427","FOS--VSIR","GTEx_BLOOD","FOS","VSIR"]
["SRR810391","MYO1F--SLC11A1","GTEx_BLOOD","MYO1F","SLC11A1"]
["SRR810391","ARHGAP15--GTDC1","GTEx_BLOOD","ARHGAP15","GTDC1"]
["SRR810595","S100A12--SLC11A1","GTEx_BLOOD","S100A12","SLC11A1"]
["SRR810595","GCA--CD55","GTEx_BLOOD","GCA","CD55"]
["SRR810853","BRI3BP--UBC","GTEx_BLOOD","BRI3BP","UBC"]
["SRR810853","AC134669.2--TM6SF1","GTEx_BLOOD","AC134669.2","TM6SF1"]
["SRR810853","MYO1F--SLC11A1","GTEx_BLOOD","MYO1F","SLC11A1"]
["SRR810853","ARPC1B--BASP1","GTEx_BLOOD","ARPC1B","BASP1"]
["SRR810945","MARCH6--RBX1","GTEx_BLOOD","2018-03-06","RBX1"]
["SRR811049","HBB--UBB","GTEx_BLOOD","HBB","UBB"]
["SRR811049","CNN2--MED16","GTEx_BLOOD","CNN2","MED16"]
["SRR811049","OAZ1--UBB","GTEx_BLOOD","OAZ1","UBB"]
["SRR811049","RBM38--UBB","GTEx_BLOOD","RBM38","UBB"]
["SRR811049","NCOA1--HBD","GTEx_BLOOD","NCOA1","HBD"]
["SRR811049","RAB10--TRABD","GTEx_BLOOD","RAB10","TRABD"]
["SRR811379","BSG--OAZ1","GTEx_BLOOD","BSG","OAZ1"]
["SRR811379","OAZ1--METRNL","GTEx_BLOOD","OAZ1","METRNL"]
["SRR811379","OAZ1--BSG","GTEx_BLOOD","OAZ1","BSG"]
["SRR811379","GCA--CSNK1D","GTEx_BLOOD","GCA","CSNK1D"]
["SRR811379","NAMPT--CXCR4","GTEx_BLOOD","NAMPT","CXCR4"]
["SRR811491","MAEA--CTBP1","GTEx_BLOOD","MAEA","CTBP1"]
["SRR811583","IRS2--ING1","GTEx_BLOOD","IRS2","ING1"]
["SRR811583","ANKRD11--GNB1L","GTEx_BLOOD","ANKRD11","GNB1L"]
["SRR811583","TERF2IP--UBB","GTEx_BLOOD","TERF2IP","UBB"]
["SRR811583","CTDP1--PQLC1","GTEx_BLOOD","CTDP1","PQLC1"]
["SRR811583","MAPKAPK2--CBX4","GTEx_BLOOD","MAPKAPK2","CBX4"]
["SRR811583","TMCC2--UBB","GTEx_BLOOD","TMCC2","UBB"]
["SRR811583","CXCR4--RBM38","GTEx_BLOOD","CXCR4","RBM38"]
["SRR811583","GCA--ASPH","GTEx_BLOOD","GCA","ASPH"]
["SRR811583","GATS--PILRB","GTEx_BLOOD","GATS","PILRB"]
["SRR811583","GATS--PILRB","GTEx_BLOOD","GATS","PILRB"]
["SRR812177","HBB--HBA2","GTEx_BLOOD","HBB","HBA2"]
["SRR812177","MCCC1--TMCC1","GTEx_BLOOD","MCCC1","TMCC1"]
["SRR812177","TSPAN5--UBB","GTEx_BLOOD","TSPAN5","UBB"]
["SRR812461","N4BP2L2--YEATS2","GTEx_BLOOD","N4BP2L2","YEATS2"]
["SRR812461","CPPED1--B2M","GTEx_BLOOD","CPPED1","B2M"]
["SRR812461","ZNF516--CTDP1","GTEx_BLOOD","ZNF516","CTDP1"]
["SRR812461","GMIP--BCL6","GTEx_BLOOD","GMIP","BCL6"]
["SRR812461","POU2F2--VASP","GTEx_BLOOD","POU2F2","VASP"]
["SRR812461","PPP1R12C--CNN2","GTEx_BLOOD","PPP1R12C","CNN2"]
["SRR812461","FBXO42--SZRD1","GTEx_BLOOD","FBXO42","SZRD1"]
["SRR812461","PANK2--SOD2","GTEx_BLOOD","PANK2","SOD2"]
["SRR812461","TSPAN5--CYTOR","GTEx_BLOOD","TSPAN5","CYTOR"]
["SRR812461","SDK1--ELMO1","GTEx_BLOOD","SDK1","ELMO1"]
["SRR812970","PCBP2-OT1--HSPA8","GTEx_BLOOD","PCBP2-OT1","HSPA8"]
["SRR812970","UBC--B2M","GTEx_BLOOD","UBC","B2M"]
["SRR812970","RASA3--METRNL","GTEx_BLOOD","RASA3","METRNL"]
["SRR812970","ANP32A--AC015849.1","GTEx_BLOOD","ANP32A","AC015849.1"]
["SRR812970","PCGF3--GAK","GTEx_BLOOD","PCGF3","GAK"]
["SRR813560","ANKRD13D--HBB","GTEx_BLOOD","ANKRD13D","HBB"]
["SRR813560","ARRB2--DHX34","GTEx_BLOOD","ARRB2","DHX34"]
["SRR813560","OAZ1--RAC2","GTEx_BLOOD","OAZ1","RAC2"]
["SRR813560","ADSS--ZBTB18","GTEx_BLOOD","ADSS","ZBTB18"]
["SRR813560","JAZF1--FKBP8","GTEx_BLOOD","JAZF1","FKBP8"]
["SRR813560","SLC25A37--FDFT1","GTEx_BLOOD","SLC25A37","FDFT1"]
["SRR813935","EVI5--RFWD2","GTEx_BLOOD","EVI5","RFWD2"]
["SRR814317","HBB--SH3BP5","GTEx_BLOOD","HBB","SH3BP5"]
["SRR814317","PCDH9--ZNF524","GTEx_BLOOD","PCDH9","ZNF524"]
["SRR814317","SCLT1--OXCT1","GTEx_BLOOD","SCLT1","OXCT1"]
["SRR814317","RIPOR2--B2M","GTEx_BLOOD","RIPOR2","B2M"]
["SRR814363","B2M--GNAS","GTEx_BLOOD","B2M","GNAS"]
["SRR814363","OAZ1--FKBP8","GTEx_BLOOD","OAZ1","FKBP8"]
["SRR814363","GCA--AGFG1","GTEx_BLOOD","GCA","AGFG1"]
["SRR814363","GCA--CYTOR","GTEx_BLOOD","GCA","CYTOR"]
["SRR814363","RIPOR2--GNAS","GTEx_BLOOD","RIPOR2","GNAS"]
["SRR814844","JMJD1C--ANK3","GTEx_BLOOD","JMJD1C","ANK3"]
["SRR814844","NADK--GLUL","GTEx_BLOOD","NADK","GLUL"]
["SRR815494","SELL--VNN2","GTEx_BLOOD","SELL","VNN2"]
["SRR815494","CYTIP--CUL3","GTEx_BLOOD","CYTIP","CUL3"]
["SRR815494","SLC25A12--SLC11A1","GTEx_BLOOD","SLC25A12","SLC11A1"]
["SRR816589","CRADD--SLAIN1","GTEx_BLOOD","CRADD","SLAIN1"]
["SRR816589","BTBD7--PHF21A","GTEx_BLOOD","BTBD7","PHF21A"]
["SRR816589","MYO1F--SLC11A1","GTEx_BLOOD","MYO1F","SLC11A1"]
["SRR816589","SERTAD2--UBB","GTEx_BLOOD","SERTAD2","UBB"]
["SRR816745","GMFG--VIM","GTEx_BLOOD","GMFG","VIM"]
["SRR816745","SPRED2--AF127577.5","GTEx_BLOOD","SPRED2","AF127577.5"]
["SRR816745","TSPAN5--FKBP8","GTEx_BLOOD","TSPAN5","FKBP8"]
["SRR816745","SLC25A37--PSMB1","GTEx_BLOOD","SLC25A37","PSMB1"]
["SRR816920","ELK3--TPTEP1","GTEx_BLOOD","ELK3","TPTEP1"]
["SRR816920","IGF2R--DYNLT1","GTEx_BLOOD","IGF2R","DYNLT1"]
["SRR817046","DCUN1D2--TMCO3","GTEx_BLOOD","DCUN1D2","TMCO3"]
["SRR817046","OAZ1--RAC2","GTEx_BLOOD","OAZ1","RAC2"]
["SRR817046","ANKRD44--AGFG1","GTEx_BLOOD","ANKRD44","AGFG1"]
["SRR817234","HBB--ACTG1","GTEx_BLOOD","HBB","ACTG1"]
["SRR817234","HBD--ACTG1","GTEx_BLOOD","HBD","ACTG1"]
["SRR817373","ARAP1--DHX34","GTEx_BLOOD","ARAP1","DHX34"]
["SRR817444","CSF3R--SLC11A1","GTEx_BLOOD","CSF3R","SLC11A1"]
["SRR817444","HACL1--RAF1","GTEx_BLOOD","HACL1","RAF1"]
["SRR817464","AHNAK--B2M","GTEx_BLOOD","AHNAK","B2M"]
["SRR817464","FOLR3--NUDT16L1","GTEx_BLOOD","FOLR3","NUDT16L1"]
["SRR817464","GPR160--ZNF516","GTEx_BLOOD","GPR160","ZNF516"]
["SRR817464","LINC-PINT--G3BP2","GTEx_BLOOD","LINC-PINT","G3BP2"]
["SRR818537","ITGAX--YPEL3","GTEx_BLOOD","ITGAX","YPEL3"]
["SRR818537","VNN2--GCA","GTEx_BLOOD","VNN2","GCA"]
["SRR819024","FUS--SERPINA1","GTEx_BLOOD","FUS","SERPINA1"]
["SRR819024","CALCOCO2--PLEKHM1","GTEx_BLOOD","CALCOCO2","PLEKHM1"]
["SRR819024","MBP--B2M","GTEx_BLOOD","MBP","B2M"]
["SRR819024","OAZ1--RAC2","GTEx_BLOOD","OAZ1","RAC2"]
["SRR819024","PPP1R12C--CNN2","GTEx_BLOOD","PPP1R12C","CNN2"]
["SRR819210","OAZ1--RAC2","GTEx_BLOOD","OAZ1","RAC2"]
["SRR819210","AC139887.2--AL137058.2","GTEx_BLOOD","AC139887.2","AL137058.2"]
["SRR819210","SH3BP2--TMEM8A","GTEx_BLOOD","SH3BP2","TMEM8A"]
["SRR819210","DOCK4--CD55","GTEx_BLOOD","DOCK4","CD55"]
["SRR819210","PLPBP--CHMP1A","GTEx_BLOOD","PLPBP","CHMP1A"]
["SRR820733","COX15--UPP1","GTEx_BLOOD","COX15","UPP1"]
["SRR820733","PFKFB3--DHX34","GTEx_BLOOD","PFKFB3","DHX34"]
["SRR820733","IFITM1--DHX34","GTEx_BLOOD","IFITM1","DHX34"]
["SRR820733","IFITM2--DHX34","GTEx_BLOOD","IFITM2","DHX34"]
["SRR820733","CSF3R--SLC11A1","GTEx_BLOOD","CSF3R","SLC11A1"]
["SRR820779","MMP25--ARHGAP9","GTEx_BLOOD","MMP25","ARHGAP9"]
["SRR820779","OAZ1--RAC2","GTEx_BLOOD","OAZ1","RAC2"]
["SRR820779","DNAJC5--CSF3R","GTEx_BLOOD","DNAJC5","CSF3R"]
["SRR820779","CALM2--BCL6","GTEx_BLOOD","CALM2","BCL6"]
["SRR820779","GCA--RNF149","GTEx_BLOOD","GCA","RNF149"]
["SRR820779","SLC11A1--TYMP","GTEx_BLOOD","SLC11A1","TYMP"]
["SRR820779","RIPOR2--PLEKHM2","GTEx_BLOOD","RIPOR2","PLEKHM2"]
["SRR821326","NECAP1--GCA","GTEx_BLOOD","NECAP1","GCA"]
["SRR821326","LNX2--UBB","GTEx_BLOOD","LNX2","UBB"]
["SRR821326","DNM2--OAZ1","GTEx_BLOOD","DNM2","OAZ1"]
["SRR821410","STIP1--RANGAP1","GTEx_BLOOD","STIP1","RANGAP1"]
["SRR1089134","WIZ--ARMC6","GTEx_OVARY","WIZ","ARMC6"]
["SRR1102780","AC092691.1--LSAMP","GTEx_OVARY","AC092691.1","LSAMP"]
["SRR1120276","TPT1--CCNL2","GTEx_OVARY","TPT1","CCNL2"]
["SRR1336244","SMARCA4--HSD11B1L","GTEx_OVARY","SMARCA4","HSD11B1L"]
["SRR1339699","GATS--PILRB","GTEx_OVARY","GATS","PILRB"]
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{"sheet":"filtered_fusions_by_SBT","index":7,"n_rows":110287,"n_cols":11,"rows_kept":4500,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0}}
["This sheet contains the fusions that have been filtered out by the SBT-based postprocessing step"]
["TCGA_Project","Sample","junction","fusion","numReads","SBT_count","DEEPEST-Fusion_count","DEEPEST-Fusion_count_2","junction_cdf","called_by_SBT","emp.p"]
["TCGA-ACC","TCGA-OR-A5J1-01A","11:RPS6KB2:67429595:C11orf80:66788160:rev:+","RPS6KB2--C11orf80",4.0,0.0,1.0,0.0,0.463,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.446,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",2.0,2223.0,62.0,62.0,0.403,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","17:TRAPPC1:7930349:MYH10:8493898:rev:-","TRAPPC1--MYH10",5.0,0.0,110.0,0.0,0.499,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",5.0,0.0,423.0,0.0,0.51,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,495.0,0.0,0.736,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","19:PPP1R14A:38251237:FBXO27:39024242:rev:-","PPP1R14A--FBXO27",3.0,317.0,16.0,1.0,0.436,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.403,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","1:CLK2:155262868:GON4L:155784389:rev:-","CLK2--GON4L",4.0,869.0,24.0,22.0,0.53,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",5.0,5022.0,244.0,241.0,0.583,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",14.0,9462.0,7336.0,7317.0,0.901,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",9.0,1673.0,620.0,414.0,0.808,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","8:FDFT1:11809850:NEIL2:11779598:rev:+","FDFT1--NEIL2",2.0,0.0,1.0,0.0,0.531,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.408,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J1-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",4.0,0.0,98.0,0.0,0.224,false,0.0130434782609]
["TCGA-ACC","TCGA-OR-A5J1-01A","17:RAI1:17681793:+:17:UBB:16381902:+:rev","RAI1--UBB",2.0,9.0,2.0,2.0,0.961,true,0.0]
["TCGA-ACC","TCGA-OR-A5J1-01A","19:CALR:12939631:+:19:BTBD2:1987692:-:strandcross","CALR--BTBD2",2.0,0.0,1.0,0.0,0.207,false,0.0242214532872]
["TCGA-ACC","TCGA-OR-A5J1-01A","1:KRTCAP2:155172565:-:16:COTL1:84569127:-:fusion","KRTCAP2--COTL1",3.0,1.0,1.0,0.0,0.245,false,0.0207612456747]
["TCGA-ACC","TCGA-OR-A5J1-01A","2:GIGYF2:232794944:+:22:HSCB:28751241:+:fusion","GIGYF2--HSCB",1.0,0.0,1.0,0.0,0.967,false,0.0]
["TCGA-ACC","TCGA-OR-A5J1-01A","2:LINC01807:228611252:-:15:TM2D3:101626563:-:fusion","LINC01807--TM2D3",3.0,76.0,10.0,10.0,0.297,true,0.0103806228374]
["TCGA-ACC","TCGA-OR-A5J1-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",7.0,2010.0,1976.0,1665.0,0.42,true,0.00692041522491]
["TCGA-ACC","TCGA-OR-A5J1-01A","5:PAPD4:79613075:+:5:GPBP1:57175448:+:rev","PAPD4--GPBP1",1.0,0.0,1.0,0.0,0.924,false,0.0]
["TCGA-ACC","TCGA-OR-A5J2-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",12.0,1673.0,620.0,414.0,0.63,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J2-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.674,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J2-01A","11:IGF2:2133517:-:19:AES:3061257:-:fusion","IGF2--AES",1.0,0.0,1.0,0.0,0.848,false,0.0]
["TCGA-ACC","TCGA-OR-A5J2-01A","11:MCAM:119311090:-:7:HNRNPA2B1:26197732:-:fusion","MCAM--HNRNPA2B1",9.0,0.0,37.0,0.0,0.438,false,0.0109289617486]
["TCGA-ACC","TCGA-OR-A5J2-01A","1:AJAP1:4655454:+:7:CYTH3:6190531:-:fusion","AJAP1--CYTH3",1.0,0.0,1.0,0.0,0.758,false,0.0]
["TCGA-ACC","TCGA-OR-A5J2-01A","20:NELFCD:58993675:+:2:SNRNP200:96296691:-:fusion","NELFCD--SNRNP200",2.0,0.0,1.0,0.0,0.274,false,0.016393442623]
["TCGA-ACC","TCGA-OR-A5J2-01A","2:ASXL2:25806229:-:5:PPWD1:65576879:+:fusion","ASXL2--PPWD1",2.0,0.0,1.0,0.0,0.67,false,0.00819672131148]
["TCGA-ACC","TCGA-OR-A5J3-01A","11:FADS2:61840725:TKFC:61335840:rev:+","FADS2--TKFC",2.0,590.0,11.0,11.0,0.49,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.618,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.419,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,1126.0,0.0,0.401,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","20:CTNNBL1:37694152:RPN2:37223878:rev:+","CTNNBL1--RPN2",1.0,1.0,4.0,0.0,0.862,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.503,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","6:SEC63:107957886:OSTM1:108064299:rev:-","SEC63--OSTM1",1.0,0.0,3.0,0.0,0.983,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J3-01A","19:AC008894.1:16104101:-:X:CHST7:46597760:+:fusion","AC008894.1--CHST7",7.0,4989.0,4.0,3.0,0.453,true,0.00862068965517]
["TCGA-ACC","TCGA-OR-A5J3-01A","1:DEDD:161122025:-:19:AC092069.1:12944487:-:fusion","DEDD--AC092069.1",3.0,7942.0,4.0,4.0,0.467,true,0.00862068965517]
["TCGA-ACC","TCGA-OR-A5J3-01A","20:CST2:23826433:-:X:FGD1:54449268:-:fusion","CST2--FGD1",2.0,0.0,1.0,0.0,0.323,false,0.014367816092]
["TCGA-ACC","TCGA-OR-A5J3-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",37.0,2010.0,1976.0,1665.0,0.905724963792428,true,0.00287356321839]
["TCGA-ACC","TCGA-OR-A5J3-01A","8:ERICH1:637536:-:19:BSG:580646:+:fusion","ERICH1--BSG",2.0,0.0,1.0,0.0,0.574,false,0.00574712643678]
["TCGA-ACC","TCGA-OR-A5J5-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",10.0,4613.0,511.0,496.0,0.55,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",5.0,0.0,423.0,0.0,0.446,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",12.0,6005.0,679.0,674.0,0.727,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","19:PPP1R14A:38251237:FBXO27:39024242:rev:-","PPP1R14A--FBXO27",7.0,317.0,16.0,1.0,0.448,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","19:TSHZ3:31274945:AC011525.1:31593598:rev:-","TSHZ3--AC011525.1",2.0,236.0,13.0,6.0,0.459,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.792,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.541,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",19.0,210.0,4870.0,17.0,0.480624199266434,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J5-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",4.0,0.0,297.0,0.0,0.273,false,0.0126050420168]
["TCGA-ACC","TCGA-OR-A5J6-01A","19:PRX:40398620:BLVRB:40448046:rev:-","PRX--BLVRB",1.0,1.0,2.0,1.0,0.999,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J6-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.534,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J6-01A","19:AC008686.1:13773257:-:12:SCARB1:124778586:-:fusion","AC008686.1--SCARB1",14.0,168.0,1.0,1.0,0.472,true,0.015503875969]
["TCGA-ACC","TCGA-OR-A5J6-01A","19:SAFB:5667164:+:11:AC132217.1:2129449:-:fusion","SAFB--AC132217.1",3.0,1.0,1.0,0.0,0.362,false,0.0193798449612]
["TCGA-ACC","TCGA-OR-A5J6-01A","1:DHCR24:54852203:-:12:SCARB1:124778586:-:fusion","DHCR24--SCARB1",1.0,0.0,1.0,0.0,0.778,false,0.015503875969]
["TCGA-ACC","TCGA-OR-A5J6-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",5.0,4574.0,830.0,638.0,0.27,true,0.0232558139535]
["TCGA-ACC","TCGA-OR-A5J7-01A","12:MAPKAPK5:111842769:ALDH2:111809543:rev:+","MAPKAPK5--ALDH2",2.0,0.0,2.0,0.0,0.715,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","12:SCARB1:124795195:UBC:124913774:rev:-","SCARB1--UBC",1.0,0.0,2.0,0.0,0.822,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.509,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","15:RAB27A:55314039:NEDD4:55905281:rev:-","RAB27A--NEDD4",1.0,1.0,3.0,0.0,0.969,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",3.0,2722.0,255.0,144.0,0.403,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.519,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,495.0,0.0,0.452,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.768,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","3:RAB43:129121286:EFCAB12:129421803:rev:-","RAB43--EFCAB12",1.0,0.0,1.0,0.0,0.833,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J7-01A","15:TRIP4:64409828:+:9:AL357874.1:35646690:+:fusion","TRIP4--AL357874.1",2.0,0.0,1.0,0.0,0.232,false,0.0192307692308]
["TCGA-ACC","TCGA-OR-A5J7-01A","16:CLN3:28477448:-:11:HSPA8:123059762:-:fusion","CLN3--HSPA8",2.0,0.0,2.0,0.0,0.408,false,0.00961538461538]
["TCGA-ACC","TCGA-OR-A5J7-01A","1:EPHX1:225838697:+:10:FAM45A:119104104:+:fusion","EPHX1--FAM45A",3.0,0.0,1.0,0.0,0.166,false,0.0384615384615]
["TCGA-ACC","TCGA-OR-A5J7-01A","2:EPCAM:47387601:+:6:YIPF3:43516953:-:fusion","EPCAM--YIPF3",2.0,1.0,1.0,0.0,0.309,false,0.0128205128205]
["TCGA-ACC","TCGA-OR-A5J7-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",10.0,2010.0,1976.0,1665.0,0.78,true,0.00320512820513]
["TCGA-ACC","TCGA-OR-A5J7-01A","5:HMGCR:75351315:+:1:RNPC3:103555034:+:fusion","HMGCR--RNPC3",1.0,3.0,1.0,0.0,0.996,false,0.0]
["TCGA-ACC","TCGA-OR-A5J7-01A","7:JAZF1:28180463:-:7:TAX1BP1:27827738:+:strandcross","JAZF1--TAX1BP1",2.0,8.0,4.0,1.0,0.544,false,0.00320512820513]
["TCGA-ACC","TCGA-OR-A5J7-01A","7:TRIP6:100871177:+:2:PDE6D:231739202:-:fusion","TRIP6--PDE6D",2.0,0.0,1.0,0.0,0.395,false,0.00961538461538]
["TCGA-ACC","TCGA-OR-A5J8-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.806,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","12:GCN1:120129276:RPLP0:120197462:rev:-","GCN1--RPLP0",1.0,0.0,3.0,0.0,0.807,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","13:WDFY2:51584824:INTS6-AS1:51512189:rev:+","WDFY2--INTS6-AS1",1.0,65.0,50.0,10.0,0.982,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.59,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.562,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","1:PBXIP1:154944076:GON4L:155784389:rev:-","PBXIP1--GON4L",2.0,1127.0,59.0,59.0,0.486,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.527,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J8-01A","16:GSE1:85171807:+:16:AC010551.2:84295824:-:strandcross","GSE1--AC010551.2",2.0,0.0,1.0,0.0,0.614,false,0.00712589073634]
["TCGA-ACC","TCGA-OR-A5J8-01A","19:RPL36:5691633:+:11:TMEM132A:60936747:+:fusion","RPL36--TMEM132A",10.0,0.0,1.0,0.0,0.162,false,0.0380047505938]
["TCGA-ACC","TCGA-OR-A5J8-01A","5:TCOF1:150399966:+:4:ANXA5:121669724:-:fusion","TCOF1--ANXA5",2.0,0.0,1.0,0.0,0.251,false,0.0166270783848]
["TCGA-ACC","TCGA-OR-A5J8-01A","9:ALAD:113386317:-:X:MAGED2:54815248:+:fusion","ALAD--MAGED2",4.0,0.0,1.0,0.0,0.212,false,0.0308788598575]
["TCGA-ACC","TCGA-OR-A5J9-01A","12:CCDC91:28259442:MRPS35:27755181:rev:+","CCDC91--MRPS35",1.0,1.0,2.0,0.0,0.895,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J9-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,495.0,0.0,0.448,false,"NA"]
["TCGA-ACC","TCGA-OR-A5J9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.55,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J9-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",11.0,1673.0,620.0,414.0,0.763,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J9-01A","5:PLPP1:55475299:ANKRD55:56114300:rev:-","PLPP1--ANKRD55",2.0,214.0,2.0,2.0,0.839,true,"NA"]
["TCGA-ACC","TCGA-OR-A5J9-01A","12:RHNO1:2887111:+:12:SCARB1:124778586:-:strandcross","RHNO1--SCARB1",3.0,168.0,1.0,1.0,0.156,true,0.0297619047619]
["TCGA-ACC","TCGA-OR-A5J9-01A","12:SCARB1:124777873:-:19:QTRT1:10712918:+:fusion","SCARB1--QTRT1",2.0,0.0,1.0,0.0,0.218,false,0.0208333333333]
["TCGA-ACC","TCGA-OR-A5J9-01A","14:AKT1:104792598:-:12:NOC4L:132150981:+:fusion","AKT1--NOC4L",1.0,8.0,2.0,0.0,0.797,false,0.00297619047619]
["TCGA-ACC","TCGA-OR-A5J9-01A","14:DLK1:100734428:+:4:LDB2:16898594:-:fusion","DLK1--LDB2",2.0,0.0,1.0,0.0,0.203,false,0.0208333333333]
["TCGA-ACC","TCGA-OR-A5J9-01A","16:BAIAP3:1348640:+:17:ACTG1:81511108:-:fusion","BAIAP3--ACTG1",2.0,0.0,1.0,0.0,0.453,false,0.0119047619048]
["TCGA-ACC","TCGA-OR-A5J9-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",2.0,187.0,145.0,16.0,0.206,false,0.0208333333333]
["TCGA-ACC","TCGA-OR-A5J9-01A","17:ZNF207:32368433:+:12:CD63:55726261:-:fusion","ZNF207--CD63",2.0,0.0,1.0,0.0,0.296,false,0.014880952381]
["TCGA-ACC","TCGA-OR-A5J9-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",67.0,2010.0,1976.0,1665.0,0.844815418444171,true,0.0]
["TCGA-ACC","TCGA-OR-A5J9-01A","4:MRFAP1:6641258:+:17:UBB:16380799:+:fusion","MRFAP1--UBB",48.0,0.0,122.0,0.0,0.479649159446204,false,0.0119047619048]
["TCGA-ACC","TCGA-OR-A5JA-01A","12:NCOR2:124567308:UBC:124913774:rev:-","NCOR2--UBC",3.0,230.0,124.0,58.0,0.974,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",10.0,0.0,1758.0,0.0,0.504,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:C19orf47:40348324:BLVRB:40458545:rev:-","C19orf47--BLVRB",1.0,0.0,1.0,0.0,0.812,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:C19orf70:5678421:DENND1C:6477588:rev:-","C19orf70--DENND1C",3.0,0.0,31.0,0.0,0.536,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,1126.0,0.0,0.572,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.559,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","1:PBXIP1:154944076:GON4L:155784389:rev:-","PBXIP1--GON4L",2.0,1127.0,59.0,59.0,0.486,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.97,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.534,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","4:DCAF16:17810447:LCORL:17845901:rev:-","DCAF16--LCORL",1.0,0.0,2.0,0.0,0.924,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",27.0,210.0,4870.0,17.0,0.886183883810411,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JA-01A","11:KCTD21:78176888:-:20:C20orf24:36612010:+:fusion","KCTD21--C20orf24",2.0,681.0,6.0,6.0,0.203,true,0.0225988700565]
["TCGA-ACC","TCGA-OR-A5JA-01A","14:DLK1:100734428:+:3:RPN1:128620593:-:fusion","DLK1--RPN1",2.0,0.0,2.0,0.0,0.41,false,0.0141242937853]
["TCGA-ACC","TCGA-OR-A5JA-01A","16:ALDOA:30069389:+:3:PARP3:51945495:+:fusion","ALDOA--PARP3",2.0,0.0,1.0,0.0,0.183,false,0.0282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","16:ALDOA:30069547:+:X:ZNF275:153346819:+:fusion","ALDOA--ZNF275",1.0,0.0,1.0,0.0,0.646,false,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","16:MT1X:56683230:+:7:SUMF2:56064332:+:fusion","MT1X--SUMF2",6.0,1081.0,1.0,0.0,0.152,false,0.0367231638418]
["TCGA-ACC","TCGA-OR-A5JA-01A","16:NME3:1770344:-:10:AL683820.1:72275480:-:fusion","NME3--AL683820.1",3.0,0.0,1.0,0.0,0.184,false,0.0282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","17:SNX11:48113563:+:16:AC009034.1:22288738:-:fusion","SNX11--AC009034.1",1.0,700.0,1.0,0.0,0.727,false,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:PTPRS:5219310:-:19:MBD3:1592801:-:reg","PTPRS--MBD3",10.0,0.0,5.0,0.0,0.301,false,0.00881057268722]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:RPS19:41869214:+:3:CAMK2N2:184261463:-:fusion","RPS19--CAMK2N2",2.0,0.0,1.0,0.0,0.192,false,0.0225988700565]
["TCGA-ACC","TCGA-OR-A5JA-01A","19:U2AF2:55674715:+:16:TMC5:19439960:+:fusion","U2AF2--TMC5",2.0,0.0,1.0,0.0,0.152,false,0.0367231638418]
["TCGA-ACC","TCGA-OR-A5JA-01A","1:DNAJC6:65415276:+:7:PDE1C:32071433:-:fusion","DNAJC6--PDE1C",4.0,0.0,1.0,0.0,0.178,false,0.0220264317181]
["TCGA-ACC","TCGA-OR-A5JA-01A","1:PINK1:20651316:+:9:KIAA0368:111363659:-:fusion","PINK1--KIAA0368",5.0,0.0,1.0,0.0,0.209,false,0.0225988700565]
["TCGA-ACC","TCGA-OR-A5JA-01A","22:KIAA0930:45195828:-:12:DYRK4:4609939:+:fusion","KIAA0930--DYRK4",3.0,0.0,1.0,0.0,0.174,false,0.0282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",5.0,0.0,225.0,0.0,0.266,false,0.0197740112994]
["TCGA-ACC","TCGA-OR-A5JA-01A","2:LINC01807:228611252:-:17:AC007780.1:68414027:+:fusion","LINC01807--AC007780.1",5.0,76.0,1.0,1.0,0.301,true,0.0169491525424]
["TCGA-ACC","TCGA-OR-A5JA-01A","2:PSME4:53864434:-:5:COX7C:86617941:+:fusion","PSME4--COX7C",3.0,239.0,1.0,0.0,0.203,false,0.0225988700565]
["TCGA-ACC","TCGA-OR-A5JA-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",8.0,2010.0,1976.0,1665.0,0.937,true,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","4:HNRNPD:82373446:-:19:MIR4751:49933064:+:fusion","HNRNPD--MIR4751",2.0,0.0,1.0,0.0,0.164,false,0.0310734463277]
["TCGA-ACC","TCGA-OR-A5JA-01A","4:MRFAP1:6641258:+:20:NELFCD:58992998:+:fusion","MRFAP1--NELFCD",20.0,0.0,38.0,0.0,0.530025813689017,false,0.0112994350282]
["TCGA-ACC","TCGA-OR-A5JA-01A","9:HDHD3:113373419:-:6:PRPF4B:4062213:+:fusion","HDHD3--PRPF4B",11.0,0.0,1.0,0.0,0.232,false,0.0197740112994]
["TCGA-ACC","TCGA-OR-A5JA-01A","9:KDM4C:6758203:+:9:AL353753.1:26114384:+:reg","KDM4C--AL353753.1",1.0,0.0,1.0,0.0,0.819,false,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JA-01A","9:RPS6:19378708:-:19:NUMBL:40690972:-:fusion","RPS6--NUMBL",4.0,0.0,1.0,0.0,0.159,false,0.0338983050847]
["TCGA-ACC","TCGA-OR-A5JA-01A","X:SLC6A8:153695327:+:19:PPP1R12C:55092662:-:fusion","SLC6A8--PPP1R12C",2.0,0.0,1.0,0.0,0.156,false,0.0338983050847]
["TCGA-ACC","TCGA-OR-A5JB-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",14.0,669.0,283.0,225.0,0.793,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","14:FLJ22447:61570760:MNAT1:60808325:rev:+","FLJ22447--MNAT1",2.0,0.0,1.0,0.0,0.696,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","16:CNOT1:58520684:AC012183.1:58706297:rev:-","CNOT1--AC012183.1",5.0,839.0,41.0,39.0,0.49,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",9.0,5703.0,236.0,234.0,0.431,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.462,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","1:FAM189B:155247217:GON4L:155784389:rev:-","FAM189B--GON4L",4.0,1546.0,73.0,71.0,0.461,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",9.0,3449.0,231.0,225.0,0.475,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.401,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JB-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.359,false,0.011583011583]
["TCGA-ACC","TCGA-OR-A5JB-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",15.0,7942.0,781.0,771.0,0.201,true,0.0132743362832]
["TCGA-ACC","TCGA-OR-A5JB-01A","17:GRB2:75318755:-:11:HSPA8:123059762:-:fusion","GRB2--HSPA8",2.0,0.0,1.0,0.0,0.356,false,0.00663716814159]
["TCGA-ACC","TCGA-OR-A5JB-01A","1:LAPTM5:30732469:-:19:CYTH2:48469306:+:fusion","LAPTM5--CYTH2",2.0,0.0,1.0,0.0,0.454,false,0.00221238938053]
["TCGA-ACC","TCGA-OR-A5JB-01A","9:PHPT1:136851022:+:2:PCBP1-AS1:70087343:-:fusion","PHPT1--PCBP1-AS1",6.0,0.0,3.0,0.0,0.179,false,0.0132743362832]
["TCGA-ACC","TCGA-OR-A5JC-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.932,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JC-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",2.0,1.0,1034.0,1.0,0.464,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JC-01A","22:PACSIN2:43002310:TTLL1:43039905:rev:-","PACSIN2--TTLL1",2.0,0.0,1.0,0.0,0.717,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JC-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.458,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JC-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.777141997276959,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JC-01A","11:PACS1:66243637:+:10:CYP17A1:102832680:-:fusion","PACS1--CYP17A1",2.0,0.0,1.0,0.0,0.377,false,0.0123456790123]
["TCGA-ACC","TCGA-OR-A5JC-01A","15:B2M:44716356:+:2:SSFA2:181919296:+:fusion","B2M--SSFA2",2.0,1.0,5.0,0.0,0.344,false,0.0123456790123]
["TCGA-ACC","TCGA-OR-A5JC-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",2.0,187.0,145.0,16.0,0.268,false,0.0123456790123]
["TCGA-ACC","TCGA-OR-A5JC-01A","1:RPL11:23694791:+:14:PLD4:104930742:+:fusion","RPL11--PLD4",2.0,0.0,1.0,0.0,0.247,false,0.0123456790123]
["TCGA-ACC","TCGA-OR-A5JC-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",1.0,4574.0,830.0,638.0,0.634,false,0.0123456790123]
["TCGA-ACC","TCGA-OR-A5JD-01A","12:ARL1:101405656:GNPTAB:101753539:rev:-","ARL1--GNPTAB",1.0,43.0,21.0,4.0,0.851,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JD-01A","19:NDUFS7:1383942:MUM1:1370642:rev:+","NDUFS7--MUM1",1.0,0.0,1.0,0.0,0.851,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.933,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JD-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.482,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.463,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JD-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",14.0,2010.0,1976.0,1665.0,0.941,true,0.00416666666667]
["TCGA-ACC","TCGA-OR-A5JE-01A","11:CD151:834591:RPLP2:811597:rev:+","CD151--RPLP2",1.0,0.0,2.0,0.0,0.934,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",4.0,198.0,115.0,72.0,0.985,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","14:EAPP:34516012:PPP2R3C:35116737:rev:-","EAPP--PPP2R3C",2.0,0.0,148.0,0.0,0.416,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","16:SLC12A4:67957742:DPEP2:67999748:rev:-","SLC12A4--DPEP2",2.0,0.0,1.0,0.0,0.741,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","17:CASKIN2:75500261:UNC13D:75841156:rev:-","CASKIN2--UNC13D",2.0,735.0,80.0,59.0,0.418,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:ACTN4:38706131:EIF3K:38620337:rev:+","ACTN4--EIF3K",2.0,0.0,1.0,0.0,0.424,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:ATP8B3:1798761:MOB3A:2085392:rev:-","ATP8B3--MOB3A",3.0,284.0,16.0,15.0,0.506,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:CDKN2D:10568513:AP1M2:10578963:rev:-","CDKN2D--AP1M2",1.0,0.0,1.0,0.0,0.816,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",31.0,0.0,1126.0,0.0,0.830899397124229,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.416,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","20:PXMP4:33714674:AL050349.1:33729161:rev:-","PXMP4--AL050349.1",1.0,0.0,1.0,0.0,0.97,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.819,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.416,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JE-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",4.0,7942.0,781.0,771.0,0.29,true,0.0161290322581]
["TCGA-ACC","TCGA-OR-A5JE-01A","12:AC006064.4:6538141:-:17:ZNF207:32369295:+:fusion","AC006064.4--ZNF207",3.0,0.0,1.0,0.0,0.264,false,0.0193548387097]
["TCGA-ACC","TCGA-OR-A5JE-01A","12:BRI3BP:124994003:+:12:UBC:124913774:-:strandcross","BRI3BP--UBC",4.0,170.0,56.0,45.0,0.915,true,0.0]
["TCGA-ACC","TCGA-OR-A5JE-01A","18:SERPINB8:63985245:+:5:SIL1:138951335:-:fusion","SERPINB8--SIL1",2.0,0.0,1.0,0.0,0.385,false,0.0161290322581]
["TCGA-ACC","TCGA-OR-A5JE-01A","19:UBXN6:4446283:-:10:SHTN1:116886566:-:fusion","UBXN6--SHTN1",2.0,0.0,1.0,0.0,0.358,false,0.0161290322581]
["TCGA-ACC","TCGA-OR-A5JE-01A","1:DHCR24:54849633:-:12:DCN:91145734:-:fusion","DHCR24--DCN",8.0,0.0,1.0,0.0,0.375,false,0.0161290322581]
["TCGA-ACC","TCGA-OR-A5JE-01A","1:HDGF:156742526:-:12:PPP1CC:110721165:-:fusion","HDGF--PPP1CC",7.0,2.0,6.0,0.0,0.456,false,0.0129032258065]
["TCGA-ACC","TCGA-OR-A5JE-01A","1:SLC2A1:42930960:-:17:FDXR:74862947:-:fusion","SLC2A1--FDXR",7.0,0.0,1.0,0.0,0.207,false,0.0225806451613]
["TCGA-ACC","TCGA-OR-A5JE-01A","22:SF3A1:30335652:-:19:FTL:48966281:+:fusion","SF3A1--FTL",5.0,0.0,1.0,0.0,0.17,false,0.0258064516129]
["TCGA-ACC","TCGA-OR-A5JE-01A","3:ITGA9:37508627:+:5:LINC01942:173705590:+:fusion","ITGA9--LINC01942",1.0,0.0,1.0,0.0,0.773,false,0.00322580645161]
["TCGA-ACC","TCGA-OR-A5JE-01A","5:HSPA9:138555360:-:12:AC005841.1:2803938:-:fusion","HSPA9--AC005841.1",3.0,1071.0,6.0,0.0,0.203,false,0.0225806451613]
["TCGA-ACC","TCGA-OR-A5JF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.878,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JF-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.653,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JF-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.433,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JF-01A","10:CYP17A1:102832511:-:10:VIM:17230654:+:strandcross","CYP17A1--VIM",4.0,0.0,1.0,0.0,0.208,false,0.0194986072423]
["TCGA-ACC","TCGA-OR-A5JF-01A","10:VIM-AS1:17229345:-:11:CTSD:1753880:-:fusion","VIM-AS1--CTSD",2.0,0.0,2.0,0.0,0.465,false,0.0139275766017]
["TCGA-ACC","TCGA-OR-A5JF-01A","12:DENR:122768840:+:12:NAP1L1:76057885:-:strandcross","DENR--NAP1L1",2.0,1.0,1.0,0.0,0.445,false,0.0139275766017]
["TCGA-ACC","TCGA-OR-A5JF-01A","19:UBA52:18572607:+:11:SERPINH1:75571781:+:fusion","UBA52--SERPINH1",2.0,575.0,3.0,1.0,0.431,false,0.0139275766017]
["TCGA-ACC","TCGA-OR-A5JF-01A","19:USE1:17219829:+:4:SRD5A3-AS1:55367163:-:fusion","USE1--SRD5A3-AS1",4.0,0.0,1.0,0.0,0.17,false,0.0194986072423]
["TCGA-ACC","TCGA-OR-A5JF-01A","2:NCL:231455442:-:8:MFSD3:144509080:+:fusion","NCL--MFSD3",2.0,0.0,2.0,0.0,0.377,false,0.0139275766017]
["TCGA-ACC","TCGA-OR-A5JF-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",30.0,2010.0,1976.0,1665.0,0.854347528046729,true,0.00557103064067]
["TCGA-ACC","TCGA-OR-A5JF-01A","3:RNF13:149961374:+:19:SCAF1:49654652:+:fusion","RNF13--SCAF1",6.0,1.0,10.0,0.0,0.234,false,0.0194986072423]
["TCGA-ACC","TCGA-OR-A5JG-01A","14:AREL1:74698764:NEK9:75105996:rev:-","AREL1--NEK9",2.0,351.0,8.0,5.0,0.901,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.838,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.461,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JG-01A","10:CYP17A1:102830605:-:1:ARHGEF19:16207011:-:fusion","CYP17A1--ARHGEF19",3.0,0.0,1.0,0.0,0.401,false,0.012539184953]
["TCGA-ACC","TCGA-OR-A5JG-01A","16:AC009063.3:83716987:-:9:TMEM268:114643134:+:fusion","AC009063.3--TMEM268",1.0,584.0,43.0,16.0,0.711,false,0.00626959247649]
["TCGA-ACC","TCGA-OR-A5JG-01A","16:MT1F:56658740:+:7:SUMF2:56064332:+:fusion","MT1F--SUMF2",10.0,1081.0,1.0,0.0,0.154,false,0.0188087774295]
["TCGA-ACC","TCGA-OR-A5JG-01A","19:EEF2:3982246:-:19:TRIM28:58550377:+:strandcross","EEF2--TRIM28",2.0,0.0,1.0,0.0,0.314,false,0.0156739811912]
["TCGA-ACC","TCGA-OR-A5JG-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",21.0,2010.0,1976.0,1665.0,0.317457326845743,true,0.0156739811912]
["TCGA-ACC","TCGA-OR-A5JI-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.486,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JI-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",2.0,442.0,88.0,47.0,0.99,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JI-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",7.0,1673.0,620.0,414.0,0.452,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JI-01A","19:BSG:572701:+:19:SHC2:425231:-:strandcross","BSG--SHC2",2.0,24.0,29.0,6.0,0.623,false,0.0]
["TCGA-ACC","TCGA-OR-A5JI-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",38.0,2010.0,1976.0,1665.0,0.931244159516316,true,0.0]
["TCGA-ACC","TCGA-OR-A5JI-01A","7:TMED4:44581093:-:4:SEC31A:82819253:-:fusion","TMED4--SEC31A",1.0,0.0,1.0,0.0,0.948,false,0.0]
["TCGA-ACC","TCGA-OR-A5JJ-01A","17:AC015688.3:27671205:SDF2:28649137:rev:-","AC015688.3--SDF2",2.0,0.0,4.0,0.0,0.496,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","1:PYGO2:154957026:GON4L:155784389:rev:-","PYGO2--GON4L",2.0,4067.0,204.0,203.0,0.51,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.445,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","2:HDAC4:239236593:NDUFA10:239990182:rev:-","HDAC4--NDUFA10",1.0,1.0,3.0,0.0,0.804,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.462,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.44,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JJ-01A","12:SCARB1:124777873:-:1:ADAM15:155051316:+:fusion","SCARB1--ADAM15",2.0,0.0,1.0,0.0,0.324,false,0.0126984126984]
["TCGA-ACC","TCGA-OR-A5JJ-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",33.0,2010.0,1976.0,1665.0,0.738267543981245,true,0.0031746031746]
["TCGA-ACC","TCGA-OR-A5JJ-01A","4:MRFAP1:6641258:+:3:CNBP:129171538:-:fusion","MRFAP1--CNBP",42.0,0.0,86.0,0.0,0.708594596653024,false,0.0031746031746]
["TCGA-ACC","TCGA-OR-A5JJ-01A","5:PAIP2:139369080:+:2:PCBP1-AS1:70087343:-:fusion","PAIP2--PCBP1-AS1",2.0,341.0,6.0,2.0,0.501,false,0.0031746031746]
["TCGA-ACC","TCGA-OR-A5JJ-01A","8:FAM160B2:22100972:+:5:HMGCR:75360288:+:fusion","FAM160B2--HMGCR",3.0,0.0,1.0,0.0,0.457,false,0.00634920634921]
["TCGA-ACC","TCGA-OR-A5JK-01A","12:C1RL:7109110:CD163L1:7357486:rev:-","C1RL--CD163L1",2.0,0.0,1.0,0.0,0.401,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JK-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",5.0,4613.0,511.0,496.0,0.417,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JK-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",14.0,0.0,1126.0,0.0,0.43,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JK-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.708,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JK-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.825313592742931,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JK-01A","11:CTSD:1753803:-:8:STAR:38144386:-:fusion","CTSD--STAR",2.0,0.0,1.0,0.0,0.363,false,0.00911854103343]
["TCGA-ACC","TCGA-OR-A5JK-01A","19:UBA52:18572607:+:8:C8orf76:123239144:-:fusion","UBA52--C8orf76",2.0,5.0,1.0,1.0,0.171,true,0.0182370820669]
["TCGA-ACC","TCGA-OR-A5JK-01A","3:ZBTB38:141369946:+:17:C17orf64:60431181:+:fusion","ZBTB38--C17orf64",2.0,0.0,1.0,0.0,0.873,false,0.0]
["TCGA-ACC","TCGA-OR-A5JK-01A","9:NDUFA8:122152245:-:7:HNRNPA2B1:26191128:-:fusion","NDUFA8--HNRNPA2B1",2.0,0.0,2.0,0.0,0.329,false,0.00911854103343]
["TCGA-ACC","TCGA-OR-A5JL-01A","10:UNC5B:71213064:PALD1:70564364:rev:+","UNC5B--PALD1",3.0,0.0,1.0,0.0,0.755,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JL-01A","14:EAPP:34516012:PPP2R3C:35116737:rev:-","EAPP--PPP2R3C",4.0,0.0,148.0,0.0,0.57,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JL-01A","17:SLC25A19:75272981:UNC13D:75841156:rev:-","SLC25A19--UNC13D",2.0,512.0,33.0,31.0,0.423,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JL-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",4.0,8277.0,230.0,230.0,0.477,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JL-01A","12:PCBP2:53461143:+:6:HLA-A:29944122:+:fusion","PCBP2--HLA-A",16.0,0.0,1.0,0.0,0.244858520654265,false,0.0198675496689]
["TCGA-ACC","TCGA-OR-A5JL-01A","14:AKT1:104792598:-:12:NOC4L:132150981:+:fusion","AKT1--NOC4L",1.0,8.0,2.0,0.0,0.963,false,0.00220750551876]
["TCGA-ACC","TCGA-OR-A5JL-01A","14:ZNF219:21091865:-:11:DHCR7:71435973:-:fusion","ZNF219--DHCR7",2.0,0.0,1.0,0.0,0.348,false,0.0132450331126]
["TCGA-ACC","TCGA-OR-A5JL-01A","17:RNF167:4945170:+:15:SERF2:43793710:+:fusion","RNF167--SERF2",3.0,0.0,4.0,0.0,0.512,false,0.00662251655629]
["TCGA-ACC","TCGA-OR-A5JL-01A","1:PRDX1:45511047:-:X:BEX5:102154302:-:fusion","PRDX1--BEX5",5.0,2.0,1.0,0.0,0.195,false,0.0264900662252]
["TCGA-ACC","TCGA-OR-A5JL-01A","2:LINC01807:228611252:-:15:TM2D3:101626563:-:fusion","LINC01807--TM2D3",10.0,76.0,10.0,10.0,0.493,true,0.00662251655629]
["TCGA-ACC","TCGA-OR-A5JL-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.993,true,0.0]
["TCGA-ACC","TCGA-OR-A5JL-01A","4:MRFAP1:6641258:+:20:NELFCD:58992998:+:fusion","MRFAP1--NELFCD",28.0,0.0,38.0,0.0,0.189815932549174,false,0.0264900662252]
["TCGA-ACC","TCGA-OR-A5JL-01A","8:SARAF:30066777:-:11:ILK:6608884:+:fusion","SARAF--ILK",2.0,0.0,2.0,0.0,0.245,false,0.0176600441501]
["TCGA-ACC","TCGA-OR-A5JM-01A","11:AC107884.1:7465753:STK33:8464822:rev:-","AC107884.1--STK33",1.0,39.0,25.0,2.0,0.884,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JM-01A","12:MON2:62484233:USP15:62401187:rev:+","MON2--USP15",1.0,1.0,4.0,1.0,0.874,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.457,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JM-01A","9:CDK5RAP2:120388876:PHF19:120868356:rev:-","CDK5RAP2--PHF19",5.0,0.0,135.0,0.0,0.407,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JM-01A","12:AC134511.1:67069050:-:12:RAP1B:68648699:+:strandcross","AC134511.1--RAP1B",2.0,1.0,1.0,0.0,0.154,false,0.0284697508897]
["TCGA-ACC","TCGA-OR-A5JM-01A","12:CPSF6:69262562:+:16:CHMP1A:89647331:-:fusion","CPSF6--CHMP1A",1.0,94.0,88.0,34.0,0.828,false,0.00355871886121]
["TCGA-ACC","TCGA-OR-A5JM-01A","4:NR3C2:148435104:-:21:LINC00158:25386338:-:fusion","NR3C2--LINC00158",2.0,0.0,1.0,0.0,0.367,false,0.00711743772242]
["TCGA-ACC","TCGA-OR-A5JM-01A","5:ERGIC1:172834433:+:5:CTB-113P19.1:151724565:+:rev","ERGIC1--CTB-113P19.1",1.0,0.0,1.0,0.0,0.771,false,0.00355871886121]
["TCGA-ACC","TCGA-OR-A5JM-01A","6:CYP21A2:32038624:+:19:TUBB4A:6496221:-:fusion","CYP21A2--TUBB4A",2.0,0.0,1.0,0.0,0.65,false,0.00355871886121]
["TCGA-ACC","TCGA-OR-A5JO-01A","19:MIER2:305573:RNF126:650594:rev:-","MIER2--RNF126",2.0,0.0,9.0,0.0,0.421,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","1:PBXIP1:154944076:GON4L:155784389:rev:-","PBXIP1--GON4L",5.0,1127.0,59.0,59.0,0.5,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.738,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","3:RSRC1:158203245:PQLC2L:157571177:rev:+","RSRC1--PQLC2L",1.0,0.0,1.0,0.0,0.907,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","5:FAXDC2:154818494:AC010476.1:155111664:rev:-","FAXDC2--AC010476.1",9.0,0.0,46.0,0.0,0.494,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",4.0,35.0,139.0,0.0,0.511,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.725,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JO-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",7.0,0.0,225.0,0.0,0.372,false,0.00506329113924]
["TCGA-ACC","TCGA-OR-A5JP-01A","10:INPP5A:132710456:PWWP2B:132417061:rev:+","INPP5A--PWWP2B",1.0,2.0,5.0,0.0,0.991,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JP-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",1.0,198.0,115.0,72.0,0.835,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JP-01A","17:ACAP1:7349167:C17orf49:7015817:rev:+","ACAP1--C17orf49",2.0,0.0,2.0,0.0,0.415,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JP-01A","1:CDK11B:1645611:FAAP20:2193910:rev:-","CDK11B--FAAP20",3.0,5.0,17.0,0.0,0.452,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JP-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.877,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JP-01A","10:CYP17A1:102830531:-:10:MIR4678:87503881:+:strandcross","CYP17A1--MIR4678",5.0,0.0,1.0,0.0,0.295,false,0.0176470588235]
["TCGA-ACC","TCGA-OR-A5JP-01A","10:ZRANB1:124943307:+:20:GHRH:37256908:-:fusion","ZRANB1--GHRH",2.0,0.0,1.0,0.0,0.498,false,0.00588235294118]
["TCGA-ACC","TCGA-OR-A5JP-01A","19:CHMP2A:58552259:-:11:SNORD97:10801608:-:fusion","CHMP2A--SNORD97",5.0,0.0,1.0,0.0,0.237,false,0.0264705882353]
["TCGA-ACC","TCGA-OR-A5JP-01A","19:LRP3:33206733:+:11:AC132217.1:2129449:-:fusion","LRP3--AC132217.1",2.0,0.0,2.0,0.0,0.304,false,0.0176470588235]
["TCGA-ACC","TCGA-OR-A5JP-01A","19:OAZ1:2271954:+:17:SECTM1:82323316:-:fusion","OAZ1--SECTM1",2.0,0.0,1.0,0.0,0.42,false,0.00882352941176]
["TCGA-ACC","TCGA-OR-A5JP-01A","20:EPB41L1:36092813:+:20:GHRH:37256908:-:strandcross","EPB41L1--GHRH",3.0,1.0,2.0,1.0,0.629,false,0.0]
["TCGA-ACC","TCGA-OR-A5JP-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",8.0,2010.0,1976.0,1665.0,0.773,true,0.00294117647059]
["TCGA-ACC","TCGA-OR-A5JQ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.616,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JQ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.834,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JQ-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",10.0,1673.0,620.0,414.0,0.47,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JQ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.525,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JQ-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.283,false,0.0137614678899]
["TCGA-ACC","TCGA-OR-A5JQ-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",3.0,1067.0,394.0,191.0,0.884,true,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JQ-01A","16:CAPN15:533998:+:12:NOC4L:132150981:+:fusion","CAPN15--NOC4L",1.0,24.0,4.0,2.0,0.632,false,0.0154320987654]
["TCGA-ACC","TCGA-OR-A5JQ-01A","16:HMOX2:4483754:+:16:CARHSP1:8859335:-:strandcross","HMOX2--CARHSP1",2.0,4.0,1.0,0.0,0.422,false,0.0185185185185]
["TCGA-ACC","TCGA-OR-A5JQ-01A","19:NDUFB7:14571889:-:19:KANK3:8323538:-:reg","NDUFB7--KANK3",2.0,6.0,1.0,0.0,0.202,false,0.033950617284]
["TCGA-ACC","TCGA-OR-A5JQ-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",97.0,2010.0,1976.0,1665.0,0.894063978375064,true,0.00308641975309]
["TCGA-ACC","TCGA-OR-A5JQ-01A","X:CH17-340M24.3:154428128:-:19:ZNF611:52708326:-:fusion","CH17-340M24.3--ZNF611",1.0,2.0,1.0,0.0,0.871,false,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JR-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.463,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JR-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,411.0,151.0,68.0,0.852,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JR-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",6.0,1673.0,620.0,414.0,0.513,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JR-01A","8:TOP1MT:143344916:PUF60:143824396:rev:-","TOP1MT--PUF60",4.0,0.0,32.0,0.0,0.449,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JR-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.776,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JR-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",52.0,2010.0,1976.0,1665.0,0.664538428162005,true,0.0079575596817]
["TCGA-ACC","TCGA-OR-A5JR-01A","3:SLC25A36:140963227:+:16:CHMP1A:89647331:-:fusion","SLC25A36--CHMP1A",1.0,12.0,3.0,0.0,0.711,false,0.0053050397878]
["TCGA-ACC","TCGA-OR-A5JR-01A","6:PEX6:42966242:-:20:MYL9:36549077:+:fusion","PEX6--MYL9",2.0,0.0,1.0,0.0,0.347,false,0.0185676392573]
["TCGA-ACC","TCGA-OR-A5JS-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",5.0,198.0,115.0,72.0,0.891,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JS-01A","15:MGA:41669958:NUSAP1:41351964:rev:+","MGA--NUSAP1",2.0,533.0,11.0,6.0,0.622,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JS-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.779,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JS-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.414,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JS-01A","16:HMOX2:4483754:+:3:COPG1:129267024:+:fusion","HMOX2--COPG1",1.0,1027.0,17.0,8.0,0.672,false,0.0118343195266]
["TCGA-ACC","TCGA-OR-A5JS-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",6.0,187.0,145.0,16.0,0.219,false,0.0236686390533]
["TCGA-ACC","TCGA-OR-A5JS-01A","22:MICAL3:17864899:-:12:CD63:55728352:-:fusion","MICAL3--CD63",2.0,0.0,1.0,0.0,0.169,false,0.0295857988166]
["TCGA-ACC","TCGA-OR-A5JT-01A","4:PPA2:105473894:TBCK:106193770:rev:-","PPA2--TBCK",1.0,0.0,2.0,0.0,0.99,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JT-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.645,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JT-01A","11:IGF2:2132673:-:1:HDGF:156744570:-:fusion","IGF2--HDGF",2.0,4.0,1.0,0.0,0.219,false,0.015037593985]
["TCGA-ACC","TCGA-OR-A5JT-01A","17:DDX5:64503430:-:3:RNF7:141746255:+:fusion","DDX5--RNF7",6.0,0.0,3.0,0.0,0.171,false,0.0200501253133]
["TCGA-ACC","TCGA-OR-A5JT-01A","1:FABP3:31365713:-:19:AC008735.2:55674710:-:fusion","FABP3--AC008735.2",2.0,585.0,1.0,0.0,0.376,false,0.0125313283208]
["TCGA-ACC","TCGA-OR-A5JT-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",12.0,2010.0,1976.0,1665.0,0.56,true,0.0100250626566]
["TCGA-ACC","TCGA-OR-A5JT-01A","7:AC002384.2:106832189:+:19:AC008567.3:9539406:+:fusion","AC002384.2--AC008567.3",5.0,477.0,1.0,1.0,0.299,true,0.0125313283208]
["TCGA-ACC","TCGA-OR-A5JT-01A","7:TWIST1:19115468:-:2:PCBP1-AS1:70087343:-:fusion","TWIST1--PCBP1-AS1",4.0,33.0,3.0,0.0,0.276,false,0.015037593985]
["TCGA-ACC","TCGA-OR-A5JT-01A","8:CLU:27604924:-:22:HPS4:26470813:-:fusion","CLU--HPS4",2.0,0.0,1.0,0.0,0.503,false,0.0125313283208]
["TCGA-ACC","TCGA-OR-A5JT-01A","9:FAM219A:34458204:-:11:C11orf49:47052388:+:fusion","FAM219A--C11orf49",1.0,0.0,1.0,0.0,0.896,false,0.00250626566416]
["TCGA-ACC","TCGA-OR-A5JV-01A","5:SKP1:134173926:CDKL3:134308727:rev:-","SKP1--CDKL3",1.0,0.0,1.0,0.0,0.949,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JV-01A","X:LINC01278:63560832:ARHGEF9:63638209:rev:-","LINC01278--ARHGEF9",1.0,0.0,3.0,0.0,0.885,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JV-01A","11:AC132217.1:2129121:-:7:BUD23:73683571:+:fusion","AC132217.1--BUD23",2.0,0.0,1.0,0.0,0.226,false,0.0260869565217]
["TCGA-ACC","TCGA-OR-A5JV-01A","14:SERPINA5:94590896:+:19:AC020934.3:12802072:+:fusion","SERPINA5--AC020934.3",2.0,0.0,1.0,0.0,0.252,false,0.0260869565217]
["TCGA-ACC","TCGA-OR-A5JV-01A","17:ACACA:37369370:-:17:PCGF2:38736170:-:rev","ACACA--PCGF2",1.0,913.0,2.0,1.0,0.758,false,0.00869565217391]
["TCGA-ACC","TCGA-OR-A5JV-01A","19:AC006504.5:27793650:+:19:TRPM4:49168260:+:reg","AC006504.5--TRPM4",1.0,0.0,1.0,0.0,0.983,false,0.0]
["TCGA-ACC","TCGA-OR-A5JV-01A","3:AC092691.1:117997182:-:3:LSAMP:116086556:-:reg","AC092691.1--LSAMP",4.0,31.0,84.0,24.0,0.853,true,0.00869565217391]
["TCGA-ACC","TCGA-OR-A5JW-01A","12:RNF41:56213958:CS:56283857:rev:-","RNF41--CS",1.0,0.0,1.0,0.0,0.913,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JW-01A","16:AMFR:56385919:FAM192A:57173869:rev:-","AMFR--FAM192A",1.0,2.0,9.0,2.0,0.828,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JW-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",1.0,9462.0,7336.0,7317.0,0.906,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JW-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",1.0,402.0,251.0,118.0,0.831,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JW-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.729,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JW-01A","12:METTL7A:50930422:+:17:AC015845.2:57772196:-:fusion","METTL7A--AC015845.2",2.0,184.0,1.0,0.0,0.304,false,0.0112994350282]
["TCGA-ACC","TCGA-OR-A5JW-01A","19:CALR:12943962:+:5:MEF2C:88722925:-:fusion","CALR--MEF2C",2.0,0.0,4.0,0.0,0.177,false,0.0169491525424]
["TCGA-ACC","TCGA-OR-A5JW-01A","19:LDLR:11131812:+:17:FDXR:74866876:-:fusion","LDLR--FDXR",4.0,0.0,1.0,0.0,0.152,false,0.0225988700565]
["TCGA-ACC","TCGA-OR-A5JW-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",15.0,2010.0,1976.0,1665.0,0.911,true,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JW-01A","4:SORBS2:185587306:-:1:MKNK1:46565136:-:fusion","SORBS2--MKNK1",3.0,0.0,73.0,0.0,0.218,false,0.0141242937853]
["TCGA-ACC","TCGA-OR-A5JW-01A","7:AKR1B1:134449720:-:17:ABCC3:50679798:+:fusion","AKR1B1--ABCC3",1.0,0.0,1.0,0.0,0.89,false,0.00282485875706]
["TCGA-ACC","TCGA-OR-A5JX-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.411,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","15:CRTC3-AS1:90714921:VPS33B:90999975:rev:-","CRTC3-AS1--VPS33B",2.0,47.0,1.0,0.0,0.406,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",8.0,6005.0,679.0,674.0,0.607,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",5.0,2404.0,367.0,349.0,0.423,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","1:PBXIP1:154944076:GON4L:155784389:rev:-","PBXIP1--GON4L",7.0,1127.0,59.0,59.0,0.536,true,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",25.0,210.0,4870.0,17.0,0.81311450579075,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JX-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",5.0,7942.0,781.0,771.0,0.506,true,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JX-01A","12:GAPDH:6538315:+:19:PRKCSH:11447934:+:fusion","GAPDH--PRKCSH",2.0,0.0,1.0,0.0,0.505,false,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JX-01A","15:PKM:72199036:-:14:DLK1:100734149:+:fusion","PKM--DLK1",2.0,0.0,1.0,0.0,0.342,false,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JX-01A","19:RPL28:55388048:+:17:DVL2:7226313:-:fusion","RPL28--DVL2",3.0,0.0,12.0,0.0,0.195,false,0.0154320987654]
["TCGA-ACC","TCGA-OR-A5JX-01A","1:CAP1:40072271:+:11:TMPRSS4:118107774:+:fusion","CAP1--TMPRSS4",4.0,1.0,121.0,0.0,0.249,false,0.0154320987654]
["TCGA-ACC","TCGA-OR-A5JX-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",31.0,2010.0,1976.0,1665.0,0.320991075798007,true,0.00617283950617]
["TCGA-ACC","TCGA-OR-A5JX-01A","5:APC:112801383:+:5:REEP2:138445683:+:reg","APC--REEP2",1.0,0.0,1.0,0.0,0.85,false,0.0]
["TCGA-ACC","TCGA-OR-A5JY-01A","11:KMT2A:118476982:ATP5L:118409000:rev:+","KMT2A--ATP5L",1.0,0.0,1.0,0.0,0.873,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JY-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.421,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JY-01A","2:DGKD:233354674:SAG:233346807:rev:+","DGKD--SAG",1.0,0.0,1.0,0.0,0.922,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JY-01A","11:IGF2:2132716:-:7:EIF3B:2378689:+:fusion","IGF2--EIF3B",2.0,0.0,1.0,0.0,0.166,false,0.0377358490566]
["TCGA-ACC","TCGA-OR-A5JY-01A","11:MIR1237:64368703:+:11:AC132217.1:2129449:-:strandcross","MIR1237--AC132217.1",2.0,0.0,1.0,0.0,0.351,false,0.0157232704403]
["TCGA-ACC","TCGA-OR-A5JY-01A","15:AC107976.2:94856719:-:19:NOP53:47755474:+:fusion","AC107976.2--NOP53",2.0,67.0,90.0,15.0,0.429,true,0.0062893081761]
["TCGA-ACC","TCGA-OR-A5JY-01A","17:LRRC75A-AS1:16441738:+:8:AC090198.1:124488510:+:fusion","LRRC75A-AS1--AC090198.1",2.0,0.0,1.0,0.0,0.274,false,0.0220125786164]
["TCGA-ACC","TCGA-OR-A5JY-01A","2:LINC01807:228611252:-:15:TM2D3:101626563:-:fusion","LINC01807--TM2D3",9.0,76.0,10.0,10.0,0.398,true,0.0062893081761]
["TCGA-ACC","TCGA-OR-A5JY-01A","6:SNX14:85507233:-:6:MDN1:89648329:-:rev","SNX14--MDN1",1.0,0.0,1.0,0.0,0.74,false,0.00314465408805]
["TCGA-ACC","TCGA-OR-A5JY-01A","8:CLU:27604924:-:8:STAR:38150992:-:rev","CLU--STAR",3.0,0.0,1.0,0.0,0.259,false,0.0283018867925]
["TCGA-ACC","TCGA-OR-A5JZ-01A","16:AC009120.2:74305739:RNU6-758P:75286800:rev:-","AC009120.2--RNU6-758P",2.0,26.0,12.0,0.0,0.401,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JZ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.814,false,"NA"]
["TCGA-ACC","TCGA-OR-A5JZ-01A","14:DLK1:100734428:+:14:PPM1A:60282684:+:rev","DLK1--PPM1A",4.0,0.0,1.0,0.0,0.211,false,0.0132450331126]
["TCGA-ACC","TCGA-OR-A5JZ-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.157,true,0.0198675496689]
["TCGA-ACC","TCGA-OR-A5K0-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",2.0,2052.0,512.0,403.0,0.489,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","19:ATP8B3:1798761:MOB3A:2085392:rev:-","ATP8B3--MOB3A",3.0,284.0,16.0,15.0,0.448,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",36.0,0.0,1126.0,0.0,0.64591393308171,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",2.0,2061.0,160.0,157.0,0.413,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.657,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.404,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","9:CDK5RAP2:120388876:PHF19:120868356:rev:-","CDK5RAP2--PHF19",6.0,0.0,135.0,0.0,0.506,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","9:HSDL2:112405722:DNAJC25:111653100:rev:+","HSDL2--DNAJC25",1.0,0.0,1.0,0.0,0.801,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K0-01A","16:GABARAPL2:75577881:+:20:MYH7B:34999056:+:fusion","GABARAPL2--MYH7B",5.0,0.0,1.0,0.0,0.189,false,0.0251798561151]
["TCGA-ACC","TCGA-OR-A5K0-01A","17:ACADVL:7220526:+:8:STAR:38144386:-:fusion","ACADVL--STAR",2.0,0.0,1.0,0.0,0.367,false,0.00359712230216]
["TCGA-ACC","TCGA-OR-A5K0-01A","5:CD74:150407152:-:3:HYAL2:50320987:-:fusion","CD74--HYAL2",2.0,0.0,1.0,0.0,0.424,false,0.00359712230216]
["TCGA-ACC","TCGA-OR-A5K0-01A","7:AC007161.3:7673453:+:7:PHF14:11111350:+:reg","AC007161.3--PHF14",1.0,11.0,2.0,0.0,0.877,false,0.0]
["TCGA-ACC","TCGA-OR-A5K0-01A","7:ZMIZ2:44766554:+:7:PCOLCE:100606416:+:reg","ZMIZ2--PCOLCE",3.0,0.0,1.0,0.0,0.157,false,0.0251798561151]
["TCGA-ACC","TCGA-OR-A5K0-01A","8:CTSB:11844355:-:19:STRN4:46725379:-:fusion","CTSB--STRN4",2.0,0.0,1.0,0.0,0.438,false,0.00359712230216]
["TCGA-ACC","TCGA-OR-A5K0-01A","8:CTSB:11854680:-:9:LAMC3:131079149:+:fusion","CTSB--LAMC3",2.0,1.0,1.0,0.0,0.281,false,0.00719424460432]
["TCGA-ACC","TCGA-OR-A5K1-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.419,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","19:AC002985.1:18907013:COPE:18919354:rev:-","AC002985.1--COPE",1.0,0.0,3.0,0.0,0.963,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.543,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",9.0,1673.0,620.0,414.0,0.565,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","6:VWA7:31775333:HLA-DRB5:32522174:rev:-","VWA7--HLA-DRB5",2.0,0.0,3.0,0.0,0.565,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","8:TNFRSF10D:23148438:TNFRSF10A:23201919:rev:-","TNFRSF10D--TNFRSF10A",2.0,1.0,73.0,0.0,0.446,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","X:MAOB:43838868:NDP:43958852:rev:-","MAOB--NDP",1.0,0.0,1.0,0.0,0.811,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.488,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K1-01A","2:RBKS:27890257:-:2:BABAM2:28298338:+:strandcross","RBKS--BABAM2",1.0,1.0,1.0,0.0,0.905,false,0.0]
["TCGA-ACC","TCGA-OR-A5K2-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",18.0,0.0,495.0,0.0,0.725475148384947,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K2-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.723,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K2-01A","12:PCBP2:53479832:+:16:RSL1D1:11838113:-:fusion","PCBP2--RSL1D1",2.0,0.0,1.0,0.0,0.257,false,0.0164609053498]
["TCGA-ACC","TCGA-OR-A5K2-01A","22:MICAL3:17816690:-:22:TPTEP1:16697496:+:strandcross","MICAL3--TPTEP1",3.0,0.0,1.0,0.0,0.843,false,0.00411522633745]
["TCGA-ACC","TCGA-OR-A5K2-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",7.0,2010.0,1976.0,1665.0,0.844,true,0.00411522633745]
["TCGA-ACC","TCGA-OR-A5K2-01A","5:HMGCR:75351315:+:5:HINT1:131159611:-:strandcross","HMGCR--HINT1",1.0,1.0,1.0,0.0,0.948,false,0.0]
["TCGA-ACC","TCGA-OR-A5K3-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",24.0,1673.0,620.0,414.0,0.719707222213351,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K3-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",19.0,210.0,4870.0,17.0,0.628974990814096,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5K4-01A","11:EED:86257596:TMEM126B:85635667:rev:+","EED--TMEM126B",1.0,0.0,1.0,0.0,0.813,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K4-01A","11:FADS2:61840725:TKFC:61335840:rev:+","FADS2--TKFC",2.0,590.0,11.0,11.0,0.536,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K4-01A","1:LAPTM5:30757659:PUM1:30981405:rev:-","LAPTM5--PUM1",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K4-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.407,true,"NA"]
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["TCGA-ACC","TCGA-OR-A5K4-01A","16:CARHSP1:8855065:-:16:PPL:4886047:-:reg","CARHSP1--PPL",2.0,0.0,1.0,0.0,0.333,false,0.0153256704981]
["TCGA-ACC","TCGA-OR-A5K5-01A","10:PBLD:68306761:RUFY2:68346084:rev:-","PBLD--RUFY2",1.0,0.0,1.0,0.0,0.905,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",2.0,198.0,115.0,72.0,0.808,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",5.0,2439.0,257.0,256.0,0.529,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","17:TMEM97:28319365:NLK:28185179:rev:+","TMEM97--NLK",1.0,0.0,1.0,0.0,0.972,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,411.0,151.0,68.0,0.895,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","19:FCGRT:49516199:RPS11:49497194:rev:+","FCGRT--RPS11",1.0,0.0,1.0,0.0,0.801,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","19:LDLR:11107514:SMARCA4:11058258:rev:+","LDLR--SMARCA4",2.0,1.0,2.0,1.0,0.552,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","19:RANBP3:5917322:DENND1C:6477588:rev:-","RANBP3--DENND1C",6.0,0.0,69.0,0.0,0.435,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","1:FAM189B:155247217:GON4L:155784389:rev:-","FAM189B--GON4L",9.0,1546.0,73.0,71.0,0.605,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",14.0,3449.0,231.0,225.0,0.636,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K5-01A","12:COX6A1:120438810:+:19:AC008735.2:55674710:-:fusion","COX6A1--AC008735.2",3.0,7698.0,5.0,5.0,0.697,true,0.00583090379009]
["TCGA-ACC","TCGA-OR-A5K5-01A","14:DLK1:100728459:+:11:CTSD:1753661:-:fusion","DLK1--CTSD",4.0,0.0,1.0,0.0,0.22,false,0.0262390670554]
["TCGA-ACC","TCGA-OR-A5K5-01A","17:TMEM94:75498323:+:11:AC132217.1:2129449:-:fusion","TMEM94--AC132217.1",2.0,0.0,1.0,0.0,0.247,false,0.0262390670554]
["TCGA-ACC","TCGA-OR-A5K5-01A","19:MYO1F:8577307:-:9:LRSAM1:127451929:+:fusion","MYO1F--LRSAM1",4.0,0.0,1.0,0.0,0.845,false,0.00291545189504]
["TCGA-ACC","TCGA-OR-A5K5-01A","2:ARMC9:231198941:+:19:NPAS1:47021006:+:fusion","ARMC9--NPAS1",2.0,0.0,1.0,0.0,0.624,false,0.00583090379009]
["TCGA-ACC","TCGA-OR-A5K5-01A","2:PDIA6:10802499:-:10:AL583859.2:10422774:-:fusion","PDIA6--AL583859.2",2.0,0.0,1.0,0.0,0.616,false,0.00583090379009]
["TCGA-ACC","TCGA-OR-A5K5-01A","2:RMDN2:37929729:+:2:LINC01317:34286643:+:rev","RMDN2--LINC01317",3.0,0.0,1.0,0.0,0.71,false,0.00583090379009]
["TCGA-ACC","TCGA-OR-A5K5-01A","2:SP3:173954873:-:2:PDK1:172558708:+:strandcross","SP3--PDK1",2.0,0.0,1.0,0.0,0.325,false,0.0233236151603]
["TCGA-ACC","TCGA-OR-A5K6-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,411.0,151.0,68.0,0.807,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K6-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",5.0,5022.0,244.0,241.0,0.455,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.413,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K6-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.436,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K6-01A","17:FDXR:74863076:-:17:ACTG1:81512874:-:rev","FDXR--ACTG1",2.0,0.0,1.0,0.0,0.226,false,0.0190839694656]
["TCGA-ACC","TCGA-OR-A5K6-01A","1:NDUFS2:161214296:+:19:ATP1A3:41993467:-:fusion","NDUFS2--ATP1A3",4.0,42.0,28.0,0.0,0.199,false,0.00411522633745]
["TCGA-ACC","TCGA-OR-A5K6-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",9.0,0.0,225.0,0.0,0.194,false,0.0229007633588]
["TCGA-ACC","TCGA-OR-A5K6-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.762,false,0.00763358778626]
["TCGA-ACC","TCGA-OR-A5K8-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",13.0,0.0,1758.0,0.0,0.48,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","14:RBM23:22906195:PSMB5:23033674:rev:-","RBM23--PSMB5",1.0,1.0,2.0,0.0,0.936,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",3.0,2722.0,255.0,144.0,0.452,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.512,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","6:FKBP5:35573590:AL133507.1:35989902:rev:-","FKBP5--AL133507.1",9.0,1.0,31.0,0.0,0.442,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.605,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K8-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",16.0,2010.0,1976.0,1665.0,0.271023305770045,true,0.0230769230769]
["TCGA-ACC","TCGA-OR-A5K9-01A","12:FGD4:32502338:BICD1:32216247:rev:+","FGD4--BICD1",1.0,0.0,1.0,0.0,0.892,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.803,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.464,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","2:STAM2:152175603:PRPF40A:152694622:rev:-","STAM2--PRPF40A",1.0,3.0,5.0,0.0,0.855,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.421,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","5:MATR3:139293805:CTNNA1:138781923:rev:+","MATR3--CTNNA1",2.0,2.0,10.0,1.0,0.992,true,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.587,false,"NA"]
["TCGA-ACC","TCGA-OR-A5K9-01A","12:ANKRD52:56247493:-:12:DYRK2:67657106:+:strandcross","ANKRD52--DYRK2",1.0,0.0,1.0,0.0,0.714,false,0.00578034682081]
["TCGA-ACC","TCGA-OR-A5K9-01A","19:MLLT1:6270579:-:5:PRLR:35118122:-:fusion","MLLT1--PRLR",1.0,0.0,1.0,0.0,0.609,false,0.00578034682081]
["TCGA-ACC","TCGA-OR-A5K9-01A","19:PPP2R1A:52213110:+:1:RPL5:92836190:+:fusion","PPP2R1A--RPL5",1.0,0.0,1.0,0.0,0.725,false,0.00578034682081]
["TCGA-ACC","TCGA-OR-A5K9-01A","3:AC092691.1:117997182:-:3:LSAMP:116019640:-:reg","AC092691.1--LSAMP",1.0,6.0,3.0,1.0,0.617,false,0.00578034682081]
["TCGA-ACC","TCGA-OR-A5K9-01A","9:FAM166B:35563767:-:12:STAT6:57100090:-:fusion","FAM166B--STAT6",1.0,0.0,1.0,0.0,0.814,false,0.0028901734104]
["TCGA-ACC","TCGA-OR-A5KO-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.545,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.615,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KO-01A","19:APOE:44907952:+:14:DLK1:100734648:+:fusion","APOE--DLK1",2.0,0.0,1.0,0.0,0.177,false,0.0243902439024]
["TCGA-ACC","TCGA-OR-A5KT-01A","17:EFTUD2:44872446:DCAKD:45024724:rev:-","EFTUD2--DCAKD",1.0,0.0,1.0,0.0,0.848,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.455,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",1.0,397.0,152.0,123.0,0.989,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.574,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","5:RAPGEF6:131634962:MEIKIN:131818863:rev:-","RAPGEF6--MEIKIN",1.0,1.0,2.0,1.0,0.898,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","6:EPB41L2:130908821:MED23:131574295:rev:-","EPB41L2--MED23",1.0,0.0,1.0,0.0,0.994,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KT-01A","19:RPL36:5691453:+:17:UBB:16381290:+:fusion","RPL36--UBB",2.0,60.0,8.0,0.0,0.255,false,0.0153846153846]
["TCGA-ACC","TCGA-OR-A5KT-01A","1:DHCR24:54849633:-:11:NDUFV1:67608552:+:fusion","DHCR24--NDUFV1",2.0,0.0,1.0,0.0,0.199,false,0.0153846153846]
["TCGA-ACC","TCGA-OR-A5KT-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.551,true,0.00512820512821]
["TCGA-ACC","TCGA-OR-A5KU-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.509,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KU-01A","19:RPL18:48619141:DBP:48633655:rev:-","RPL18--DBP",1.0,8.0,26.0,2.0,0.959,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KU-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",1.0,9462.0,7336.0,7317.0,0.885,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KU-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.524,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5KU-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.57,false,0.0]
["TCGA-ACC","TCGA-OR-A5KV-01A","14:ARID4A:58299860:PSMA3:58257745:rev:+","ARID4A--PSMA3",1.0,0.0,1.0,0.0,0.86,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","16:PRR14:30650806:ALDOA:30069306:rev:+","PRR14--ALDOA",1.0,0.0,1.0,0.0,0.885,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","19:AC002985.1:18907013:COPE:18911071:rev:-","AC002985.1--COPE",1.0,6.0,41.0,2.0,0.975,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,1126.0,0.0,0.483,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.432,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",1.0,402.0,251.0,118.0,0.939,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",43.0,210.0,4870.0,17.0,0.581812521477925,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KV-01A","10:CYP17A1:102831508:-:X:UBA1:47212424:+:fusion","CYP17A1--UBA1",1.0,0.0,1.0,0.0,0.818,false,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","12:PCBP2:53479683:+:1:AL670729.3:228384459:-:fusion","PCBP2--AL670729.3",2.0,53.0,1.0,0.0,0.221,false,0.014164305949]
["TCGA-ACC","TCGA-OR-A5KV-01A","19:BSG:572701:+:12:NOC4L:132150981:+:fusion","BSG--NOC4L",1.0,8.0,6.0,1.0,0.731,false,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","19:EEF2:3977428:-:22:RPL3:39315555:-:fusion","EEF2--RPL3",2.0,0.0,3.0,0.0,0.319,false,0.0056657223796]
["TCGA-ACC","TCGA-OR-A5KV-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",15.0,2010.0,1976.0,1665.0,0.855,true,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","3:SH3BP5:15254853:-:9:SLC25A51:37888592:-:fusion","SH3BP5--SLC25A51",2.0,0.0,1.0,0.0,0.464,false,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","7:ATP5J2:99458195:-:5:COX7C:86617973:+:fusion","ATP5J2--COX7C",3.0,0.0,13.0,0.0,0.629,false,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","X:KDM6A:44873987:+:X:DMD:31679586:-:strandcross","KDM6A--DMD",2.0,0.0,1.0,0.0,0.656,false,0.0028328611898]
["TCGA-ACC","TCGA-OR-A5KV-01A","X:MAGED1:51901938:+:19:CIRBP:1269337:+:fusion","MAGED1--CIRBP",2.0,0.0,1.0,0.0,0.211,false,0.014164305949]
["TCGA-ACC","TCGA-OR-A5KW-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.439,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.588,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",1.0,9462.0,7336.0,7317.0,0.994,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","2:CFLAR:201133134:AOX1:200650974:rev:+","CFLAR--AOX1",1.0,0.0,1.0,0.0,0.932,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.565,true,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","X:SNX12:71068142:CXorf65:71104837:rev:-","SNX12--CXorf65",1.0,0.0,1.0,0.0,0.932,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KW-01A","11:AC132217.1:2129921:-:X:SLC35A2:48903465:-:fusion","AC132217.1--SLC35A2",3.0,2.0,1.0,0.0,0.232,false,0.013201320132]
["TCGA-ACC","TCGA-OR-A5KW-01A","14:DLK1:100734428:+:12:CPSF6:69269512:+:fusion","DLK1--CPSF6",1.0,1.0,2.0,0.0,0.89,false,0.0]
["TCGA-ACC","TCGA-OR-A5KW-01A","19:BSG:572701:+:12:NOC4L:132150981:+:fusion","BSG--NOC4L",1.0,8.0,6.0,1.0,0.755,false,0.003300330033]
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["TCGA-ACC","TCGA-OR-A5KW-01A","7:ZYX:143381779:+:12:NACA:56713683:-:fusion","ZYX--NACA",2.0,0.0,1.0,0.0,0.185,false,0.016501650165]
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["TCGA-ACC","TCGA-OR-A5KX-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,1126.0,0.0,0.572,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5KX-01A","9:KIAA0368:111440372:SUSD1:112124436:rev:-","KIAA0368--SUSD1",1.0,0.0,1.0,0.0,0.881,false,"NA"]
["TCGA-ACC","TCGA-OR-A5KX-01A","11:MCAM:119311090:-:19:KANK2:11195192:-:fusion","MCAM--KANK2",3.0,0.0,16.0,0.0,0.282,false,0.032967032967]
["TCGA-ACC","TCGA-OR-A5KX-01A","12:CPSF6:69262562:+:16:CHMP1A:89647331:-:fusion","CPSF6--CHMP1A",1.0,94.0,88.0,34.0,0.727,false,0.0]
["TCGA-ACC","TCGA-OR-A5KX-01A","12:CPSF6:69262562:+:7:ZNF467:149764678:-:fusion","CPSF6--ZNF467",2.0,12.0,4.0,1.0,0.714,false,0.0]
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["TCGA-ACC","TCGA-OR-A5KZ-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",3.0,821.0,85.0,71.0,0.519,true,"NA"]
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["TCGA-ACC","TCGA-OR-A5KZ-01A","11:AC132217.1:2129121:-:2:RANBP2:108781269:+:fusion","AC132217.1--RANBP2",2.0,0.0,1.0,0.0,0.196,false,0.01393728223]
["TCGA-ACC","TCGA-OR-A5KZ-01A","12:SMAGP:51245351:-:5:RPS23:82278577:-:fusion","SMAGP--RPS23",3.0,0.0,1.0,0.0,0.159,false,0.0278745644599]
["TCGA-ACC","TCGA-OR-A5KZ-01A","19:RPL36:5691633:+:20:LAMA5:62313460:-:fusion","RPL36--LAMA5",18.0,52.0,5.0,0.0,0.235869293284477,false,0.0104529616725]
["TCGA-ACC","TCGA-OR-A5KZ-01A","1:EVI5:92773906:-:10:TMEM26:61436248:-:fusion","EVI5--TMEM26",4.0,0.0,3.0,0.0,0.177,false,0.0208333333333]
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["TCGA-ACC","TCGA-OR-A5L3-01A","17:ACLY:41930358:DNAJC7:41977323:rev:-","ACLY--DNAJC7",1.0,0.0,1.0,0.0,0.966,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5L3-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",5.0,3449.0,231.0,225.0,0.422,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5L3-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.749,false,"NA"]
["TCGA-ACC","TCGA-OR-A5L3-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.434,false,0.0]
["TCGA-ACC","TCGA-OR-A5L3-01A","12:DNM1L:32743612:+:12:ITPR2:26595590:-:strandcross","DNM1L--ITPR2",3.0,0.0,40.0,0.0,0.249,false,0.0]
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["TCGA-ACC","TCGA-OR-A5L4-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,1126.0,0.0,0.69,false,"NA"]
["TCGA-ACC","TCGA-OR-A5L4-01A","19:TNPO2:12699201:HOOK2:12773253:rev:-","TNPO2--HOOK2",2.0,2485.0,95.0,92.0,0.425,true,"NA"]
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["TCGA-ACC","TCGA-OR-A5L4-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.590366810983532,false,"NA"]
["TCGA-ACC","TCGA-OR-A5L4-01A","16:RPL13:89563067:+:17:AC130324.1:30864940:-:fusion","RPL13--AC130324.1",6.0,543.0,1.0,0.0,0.305,false,0.023166023166]
["TCGA-ACC","TCGA-OR-A5L4-01A","2:PSME4:53864434:-:8:AP003352.1:98041726:+:fusion","PSME4--AP003352.1",4.0,7078.0,1.0,0.0,0.18,false,0.027027027027]
["TCGA-ACC","TCGA-OR-A5L5-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,495.0,0.0,0.445,false,"NA"]
["TCGA-ACC","TCGA-OR-A5L5-01A","19:RFX2:6110393:MLLT1:6230713:rev:-","RFX2--MLLT1",1.0,0.0,1.0,0.0,0.849,false,"NA"]
["TCGA-ACC","TCGA-OR-A5L5-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.792,true,"NA"]
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["TCGA-ACC","TCGA-OR-A5L5-01A","12:SUOX:56006641:+:19:AC020909.3:50483351:-:fusion","SUOX--AC020909.3",4.0,2058.0,2.0,2.0,0.264,true,0.0166666666667]
["TCGA-ACC","TCGA-OR-A5L5-01A","16:THOC6:3027722:+:1:AL592146.2:204131062:+:fusion","THOC6--AL592146.2",5.0,1331.0,1.0,1.0,0.488,true,0.00625]
["TCGA-ACC","TCGA-OR-A5L5-01A","17:LRRC75A-AS1:16441738:+:19:AC008655.1:50310539:-:fusion","LRRC75A-AS1--AC008655.1",3.0,0.0,12.0,0.0,0.242,false,0.01875]
["TCGA-ACC","TCGA-OR-A5L5-01A","1:SMG7:183549923:+:19:APOE:44907760:+:fusion","SMG7--APOE",2.0,0.0,1.0,0.0,0.322,false,0.0104166666667]
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["TCGA-ACC","TCGA-OR-A5L5-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.65,true,0.00416666666667]
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["TCGA-ACC","TCGA-OR-A5L6-01A","14:DLK1:100734428:+:3:ABHD14A:51980465:+:fusion","DLK1--ABHD14A",3.0,0.0,1.0,0.0,0.18,false,0.042328042328]
["TCGA-ACC","TCGA-OR-A5L6-01A","21:PTTG1IP:44849586:-:X:TCEAL4:103585970:+:fusion","PTTG1IP--TCEAL4",3.0,0.0,1.0,0.0,0.156,false,0.047619047619]
["TCGA-ACC","TCGA-OR-A5L8-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.451,true,"NA"]
["TCGA-ACC","TCGA-OR-A5L8-01A","1:SZT2:43410321:C1orf50:42773563:rev:+","SZT2--C1orf50",2.0,741.0,22.0,22.0,0.53,true,"NA"]
["TCGA-ACC","TCGA-OR-A5L8-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",1.0,442.0,88.0,47.0,0.93,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5L8-01A","15:PKM:72209673:-:16:CHTF18:788625:+:fusion","PKM--CHTF18",2.0,0.0,1.0,0.0,0.295,false,0.0203488372093]
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["TCGA-ACC","TCGA-OR-A5L9-01A","17:CASKIN2:75500261:UNC13D:75841156:rev:-","CASKIN2--UNC13D",2.0,735.0,80.0,59.0,0.508,false,"NA"]
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["TCGA-ACC","TCGA-OR-A5LA-01A","17:SAT2:7626237:MYH10:8493898:rev:-","SAT2--MYH10",4.0,0.0,5.0,0.0,0.429,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","19:CALR:12939235:FARSA-AS1:12932970:rev:+","CALR--FARSA-AS1",1.0,1.0,1.0,0.0,0.931,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.925,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","3:AC083798.2:122416250:FAM162A:122402760:rev:+","AC083798.2--FAM162A",3.0,5.0,11.0,4.0,0.534,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","6:KPNA5:116681338:RWDD1:116592980:rev:+","KPNA5--RWDD1",1.0,0.0,1.0,0.0,0.994,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",1.0,402.0,251.0,118.0,0.931,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.495031830243189,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LA-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",5.0,2010.0,1976.0,1665.0,0.442,true,0.0]
["TCGA-ACC","TCGA-OR-A5LB-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",10.0,0.0,1758.0,0.0,0.502,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.474,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,495.0,0.0,0.432,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.545,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","6:HLA-E:30492583:HLA-A:29945451:rev:+","HLA-E--HLA-A",2.0,9531.0,39.0,39.0,0.426,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.663,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LB-01A","10:CYP17A1:102830531:-:X:ZMYM3:71244470:-:fusion","CYP17A1--ZMYM3",4.0,0.0,1.0,0.0,0.313,false,0.00986842105263]
["TCGA-ACC","TCGA-OR-A5LB-01A","12:SCARB1:124786357:-:19:GIPC1:14478765:-:fusion","SCARB1--GIPC1",1.0,0.0,1.0,0.0,0.98,false,0.00328947368421]
["TCGA-ACC","TCGA-OR-A5LB-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",11.0,2010.0,1976.0,1665.0,0.84,true,0.00328947368421]
["TCGA-ACC","TCGA-OR-A5LB-01A","4:KIAA0232:6864183:+:10:USP54:73536437:-:fusion","KIAA0232--USP54",4.0,0.0,2.0,0.0,0.406,false,0.0]
["TCGA-ACC","TCGA-OR-A5LB-01A","7:LMBR1:156724112:-:16:CHMP1A:89647331:-:fusion","LMBR1--CHMP1A",2.0,0.0,1.0,0.0,0.664,false,0.00328947368421]
["TCGA-ACC","TCGA-OR-A5LC-01A","14:ARID4A:58301690:PSMA3:58263705:rev:+","ARID4A--PSMA3",1.0,1.0,3.0,0.0,0.93,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LC-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.577,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LC-01A","14:DLK1:100734428:+:3:TMEM42:44864197:+:fusion","DLK1--TMEM42",6.0,0.0,1.0,0.0,0.26,false,0.00507614213198]
["TCGA-ACC","TCGA-OR-A5LC-01A","19:RPL36:5691633:+:13:POLR1D:27621422:+:fusion","RPL36--POLR1D",13.0,0.0,2.0,0.0,0.204,false,0.00507614213198]
["TCGA-ACC","TCGA-OR-A5LC-01A","2:INHA:219572642:+:2:NCL:231456136:-:strandcross","INHA--NCL",1.0,0.0,1.0,0.0,0.846,false,0.0]
["TCGA-ACC","TCGA-OR-A5LC-01A","4:MRFAP1:6641258:+:3:CNBP:129171538:-:fusion","MRFAP1--CNBP",10.0,0.0,86.0,0.0,0.208,false,0.00507614213198]
["TCGA-ACC","TCGA-OR-A5LD-01A","17:H3F3B:75776434:UNC13D:75841156:rev:-","H3F3B--UNC13D",5.0,2816.0,59.0,57.0,0.414,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","17:SAT2:7626238:MYH10:8493898:rev:-","SAT2--MYH10",6.0,0.0,9.0,0.0,0.405,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",8.0,0.0,423.0,0.0,0.504,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",20.0,2722.0,255.0,144.0,0.612179590087806,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",27.0,0.0,1126.0,0.0,0.512008443750738,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","19:RANBP3:5917322:DENND1C:6477588:rev:-","RANBP3--DENND1C",7.0,0.0,69.0,0.0,0.483,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","19:TNPO2:12699201:HOOK2:12773253:rev:-","TNPO2--HOOK2",9.0,2485.0,95.0,92.0,0.434,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",6.0,3449.0,231.0,225.0,0.423,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","20:RBM12:35650142:AL035420.2:36088192:rev:-","RBM12--AL035420.2",3.0,8.0,20.0,0.0,0.455,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.461,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",8.0,97.0,99.0,0.0,0.495,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",6.0,7.0,180.0,0.0,0.401,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LD-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",6.0,1673.0,620.0,414.0,0.459,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","19:AKT2:40233821:C19orf54:40749607:rev:-","AKT2--C19orf54",2.0,0.0,1.0,0.0,0.548,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",3.0,821.0,85.0,71.0,0.401,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.916,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",1.0,442.0,88.0,47.0,0.837,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","4:KLHL5:39045096:TBC1D1:38089932:rev:+","KLHL5--TBC1D1",2.0,1.0,2.0,1.0,0.676,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LE-01A","8:MAF1:144105149:+:11:AC132217.1:2129449:-:fusion","MAF1--AC132217.1",2.0,0.0,2.0,0.0,0.286,false,0.025641025641]
["TCGA-ACC","TCGA-OR-A5LG-01A","11:FADS2:61840725:TKFC:61335840:rev:+","FADS2--TKFC",2.0,590.0,11.0,11.0,0.608,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","16:CNOT1:58520684:AC012183.1:58706297:rev:-","CNOT1--AC012183.1",2.0,839.0,41.0,39.0,0.445,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",8.0,0.0,423.0,0.0,0.468,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,495.0,0.0,0.471,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.471,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",5.0,8277.0,230.0,230.0,0.439,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","21:LTN1:28981119:RWDD2B:29008621:rev:-","LTN1--RWDD2B",1.0,0.0,1.0,0.0,0.811,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","22:NUP50:45166430:PRR5:44726577:rev:+","NUP50--PRR5",2.0,93.0,1.0,1.0,0.591,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.649,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",9.0,1673.0,620.0,414.0,0.748,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",4.0,35.0,139.0,0.0,0.464,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","X:OGT:71537110:NONO:71299942:rev:+","OGT--NONO",1.0,134.0,2.0,1.0,0.964,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LG-01A","15:RPS17:82539981:-:15:CYP11A1:74339753:-:reg","RPS17--CYP11A1",4.0,0.0,1.0,0.0,0.206,false,0.02]
["TCGA-ACC","TCGA-OR-A5LG-01A","22:TBC1D22A:46762848:+:7:ACTB:5527611:-:fusion","TBC1D22A--ACTB",2.0,0.0,1.0,0.0,0.308,false,0.0133333333333]
["TCGA-ACC","TCGA-OR-A5LG-01A","3:IQCG:197912675:-:2:EXOC6B:72379870:-:fusion","IQCG--EXOC6B",1.0,0.0,1.0,0.0,0.855,false,0.00333333333333]
["TCGA-ACC","TCGA-OR-A5LG-01A","7:SNX10:26374325:+:17:AC130324.1:30864940:-:fusion","SNX10--AC130324.1",2.0,1568.0,9.0,3.0,0.656,true,0.00666666666667]
["TCGA-ACC","TCGA-OR-A5LH-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.409,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LH-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",17.0,0.0,1126.0,0.0,0.490402614100557,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.957,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LH-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",18.0,210.0,4870.0,17.0,0.552025177912845,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LH-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",9.0,7942.0,781.0,771.0,0.368,true,0.0155440414508]
["TCGA-ACC","TCGA-OR-A5LH-01A","19:BSG:572701:+:12:NOC4L:132150981:+:fusion","BSG--NOC4L",1.0,8.0,6.0,1.0,0.753,false,0.00518134715026]
["TCGA-ACC","TCGA-OR-A5LH-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",14.0,2010.0,1976.0,1665.0,0.984,true,0.00259067357513]
["TCGA-ACC","TCGA-OR-A5LH-01A","5:HSPA9:138555360:-:12:AC005841.1:2803938:-:fusion","HSPA9--AC005841.1",2.0,1071.0,6.0,0.0,0.495,false,0.00777202072539]
["TCGA-ACC","TCGA-OR-A5LH-01A","5:HSPA9:138555360:-:21:SOD1:31659693:+:fusion","HSPA9--SOD1",2.0,0.0,3.0,0.0,0.34,false,0.0233160621762]
["TCGA-ACC","TCGA-OR-A5LH-01A","8:ADAM9:38997160:+:12:CD63:55728352:-:fusion","ADAM9--CD63",2.0,0.0,1.0,0.0,0.308,false,0.0284974093264]
["TCGA-ACC","TCGA-OR-A5LH-01A","8:PLPBP:37766355:+:16:CHMP1A:89647331:-:fusion","PLPBP--CHMP1A",1.0,70.0,43.0,10.0,0.773,false,0.00518134715026]
["TCGA-ACC","TCGA-OR-A5LJ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.969,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LJ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.536,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LJ-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",23.0,2010.0,1976.0,1665.0,0.867543486753205,true,0.00390625]
["TCGA-ACC","TCGA-OR-A5LK-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",4.0,726.0,603.0,54.0,0.521,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LK-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.458,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.993,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LK-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",13.0,1673.0,620.0,414.0,0.784,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LK-01A","11:IGF2:2129112:-:18:TCF4:55321810:-:fusion","IGF2--TCF4",2.0,0.0,2.0,0.0,0.321,false,0.0134228187919]
["TCGA-ACC","TCGA-OR-A5LL-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",1.0,198.0,115.0,72.0,0.803,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LL-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,1126.0,0.0,0.564,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LL-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.485,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LL-01A","7:EIF2AK1:6054546:CCZ1B:6814845:rev:-","EIF2AK1--CCZ1B",1.0,0.0,1.0,0.0,0.827,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LL-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.525,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LL-01A","10:PSAP:71819751:-:1:CLCNKA:16024763:+:fusion","PSAP--CLCNKA",2.0,0.0,1.0,0.0,0.335,false,0.0269058295964]
["TCGA-ACC","TCGA-OR-A5LL-01A","11:SMPD1:6394991:+:17:PRPF8:1654980:-:fusion","SMPD1--PRPF8",2.0,1552.0,7.0,3.0,0.679,false,0.0179372197309]
["TCGA-ACC","TCGA-OR-A5LL-01A","19:ZNF616:52130501:-:18:TRAPPC8:31931523:-:fusion","ZNF616--TRAPPC8",1.0,0.0,1.0,0.0,0.824,false,0.0134529147982]
["TCGA-ACC","TCGA-OR-A5LL-01A","1:MMACHC:45500413:+:5:TTC23L:34896770:+:fusion","MMACHC--TTC23L",1.0,0.0,1.0,0.0,0.807,false,0.0134529147982]
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["TCGA-ACC","TCGA-OR-A5LL-01A","2:CTNNA2:80419601:+:1:AL139011.2:160218968:-:fusion","CTNNA2--AL139011.2",1.0,0.0,1.0,0.0,0.704,false,0.0134529147982]
["TCGA-ACC","TCGA-OR-A5LL-01A","2:DCAF17:171447503:+:X:MORF4L2:103678600:-:fusion","DCAF17--MORF4L2",3.0,265.0,17.0,4.0,0.214,true,0.0448430493274]
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["TCGA-ACC","TCGA-OR-A5LL-01A","4:SORBS2:185587306:-:1:MKNK1:46565136:-:fusion","SORBS2--MKNK1",2.0,0.0,73.0,0.0,0.23,false,0.0313901345291]
["TCGA-ACC","TCGA-OR-A5LM-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.511,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","17:CASKIN2:75500261:UNC13D:75841156:rev:-","CASKIN2--UNC13D",2.0,735.0,80.0,59.0,0.408,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.497,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",16.0,0.0,1126.0,0.0,0.573750749847753,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.452,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.884,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",7.0,1673.0,620.0,414.0,0.634,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",20.0,210.0,4870.0,17.0,0.635288718185232,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LM-01A","11:DNAJC4:64232530:+:11:AC132217.1:2129449:-:strandcross","DNAJC4--AC132217.1",2.0,0.0,1.0,0.0,0.226,false,0.0164705882353]
["TCGA-ACC","TCGA-OR-A5LM-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",6.0,7942.0,781.0,771.0,0.568,true,0.0117647058824]
["TCGA-ACC","TCGA-OR-A5LM-01A","14:DLK1:100734428:+:16:GOT2:58716179:-:fusion","DLK1--GOT2",4.0,0.0,1.0,0.0,0.404,false,0.0117647058824]
["TCGA-ACC","TCGA-OR-A5LM-01A","20:CTSA:45895133:+:10:CYP17A1:102831611:-:fusion","CTSA--CYP17A1",1.0,0.0,1.0,0.0,0.663,false,0.0117647058824]
["TCGA-ACC","TCGA-OR-A5LM-01A","3:AC092691.1:117997182:-:3:LSAMP:116086556:-:reg","AC092691.1--LSAMP",2.0,31.0,84.0,24.0,0.672,false,0.0117647058824]
["TCGA-ACC","TCGA-OR-A5LM-01A","8:STAR:38145963:-:19:ILF3:10655024:+:fusion","STAR--ILF3",2.0,0.0,1.0,0.0,0.244,false,0.0141176470588]
["TCGA-ACC","TCGA-OR-A5LM-01A","X:SNX12:71061028:-:5:ATG10:82276145:+:fusion","SNX12--ATG10",1.0,285.0,15.0,12.0,0.928,true,0.00470588235294]
["TCGA-ACC","TCGA-OR-A5LN-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.479,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LN-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,495.0,0.0,0.535,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LN-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.577,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LN-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.841155932713745,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LN-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",4.0,7942.0,781.0,771.0,0.582,true,0.0049504950495]
["TCGA-ACC","TCGA-OR-A5LN-01A","12:GNS:64713449:-:17:H3F3B:75779184:-:fusion","GNS--H3F3B",7.0,0.0,1.0,0.0,0.267,false,0.0247524752475]
["TCGA-ACC","TCGA-OR-A5LN-01A","19:RPL28:55388048:+:11:INS-IGF2:2133665:-:fusion","RPL28--INS-IGF2",3.0,0.0,1.0,0.0,0.18,false,0.0445544554455]
["TCGA-ACC","TCGA-OR-A5LN-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",4.0,2010.0,1976.0,1665.0,0.695,true,0.0049504950495]
["TCGA-ACC","TCGA-OR-A5LN-01A","7:STAG3:100180895:+:19:AC005523.2:4795559:-:fusion","STAG3--AC005523.2",2.0,3815.0,67.0,65.0,0.314,true,0.019801980198]
["TCGA-ACC","TCGA-OR-A5LN-01A","8:LY6E:143022410:+:17:AC130324.1:30864940:-:fusion","LY6E--AC130324.1",20.0,0.0,1.0,0.0,0.150605446667908,false,0.0445544554455]
["TCGA-ACC","TCGA-OR-A5LO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.619,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LO-01A","15:AC090907.1:101049389:-:3:USP4:49278902:-:fusion","AC090907.1--USP4",1.0,0.0,1.0,0.0,0.779,false,0.00687285223368]
["TCGA-ACC","TCGA-OR-A5LP-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,495.0,0.0,0.451,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LP-01A","1:CCDC18-AS1:93345724:DNTTIP2:93873214:rev:-","CCDC18-AS1--DNTTIP2",1.0,0.0,6.0,0.0,0.946,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LP-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.618,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LP-01A","11:AC132217.1:2129121:-:6:IGF2R:160044514:+:fusion","AC132217.1--IGF2R",2.0,0.0,2.0,0.0,0.217,false,0.030303030303]
["TCGA-ACC","TCGA-OR-A5LP-01A","16:ALDOA:30069389:+:X:FLNA:154355072:-:fusion","ALDOA--FLNA",2.0,0.0,2.0,0.0,0.231,false,0.030303030303]
["TCGA-ACC","TCGA-OR-A5LP-01A","17:DDX5:64503430:-:6:CUTA:33418043:-:fusion","DDX5--CUTA",3.0,0.0,4.0,0.0,0.271,false,0.030303030303]
["TCGA-ACC","TCGA-OR-A5LP-01A","19:BSG:572701:+:19:OAZ1:2271385:+:reg","BSG--OAZ1",2.0,1.0,2.0,0.0,0.693,false,0.0151515151515]
["TCGA-ACC","TCGA-OR-A5LP-01A","22:NCAPH2:50521036:+:19:ATG4D:10551897:+:fusion","NCAPH2--ATG4D",5.0,1.0,1.0,0.0,0.269,false,0.030303030303]
["TCGA-ACC","TCGA-OR-A5LP-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",57.0,2010.0,1976.0,1665.0,0.360228739641974,true,0.0212121212121]
["TCGA-ACC","TCGA-OR-A5LP-01A","5:ELL2:95961575:-:5:CAST:96722639:+:strandcross","ELL2--CAST",1.0,1.0,2.0,0.0,0.666,false,0.0151515151515]
["TCGA-ACC","TCGA-OR-A5LR-01A","12:MDM2:68809292:SLC35E3:68759157:rev:+","MDM2--SLC35E3",1.0,0.0,1.0,0.0,0.999,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",2.0,0.0,147.0,0.0,0.434,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.449,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","5:GFM2:74765035:POC5:75685484:rev:-","GFM2--POC5",1.0,125.0,64.0,16.0,0.861,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","5:MARCH6:10405677:CCT5:10254145:rev:+","MARCH6--CCT5",1.0,0.0,1.0,0.0,0.845,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.439,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LR-01A","11:IGF2:2132716:-:12:CAPRIN2:30715141:-:fusion","IGF2--CAPRIN2",5.0,0.0,3.0,0.0,0.282,false,0.0366972477064]
["TCGA-ACC","TCGA-OR-A5LR-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.351,true,0.0366972477064]
["TCGA-ACC","TCGA-OR-A5LR-01A","12:TMBIM6:49764723:+:5:IL7R:35875512:+:fusion","TMBIM6--IL7R",5.0,528.0,2.0,0.0,0.174,false,0.0596330275229]
["TCGA-ACC","TCGA-OR-A5LR-01A","17:LGALS3BP:78971256:-:12:HSP90B1:103938238:+:fusion","LGALS3BP--HSP90B1",4.0,0.0,20.0,0.0,0.494,false,0.0229357798165]
["TCGA-ACC","TCGA-OR-A5LR-01A","20:GNAS:58909216:+:3:SCAP:47414099:-:fusion","GNAS--SCAP",2.0,0.0,1.0,0.0,0.237,false,0.0366972477064]
["TCGA-ACC","TCGA-OR-A5LR-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.71,false,0.00917431192661]
["TCGA-ACC","TCGA-OR-A5LR-01A","5:DUSP1:172769575:-:12:AC073575.2:112019430:-:fusion","DUSP1--AC073575.2",2.0,0.0,1.0,0.0,0.344,false,0.0366972477064]
["TCGA-ACC","TCGA-OR-A5LR-01A","7:LRCH4:100575964:-:14:DLK1:100734648:+:fusion","LRCH4--DLK1",4.0,0.0,1.0,0.0,0.237,false,0.0366972477064]
["TCGA-ACC","TCGA-OR-A5LR-01A","7:TYW1B:72826855:-:11:STX5:62807628:-:fusion","TYW1B--STX5",3.0,0.0,1.0,0.0,0.787,false,0.00917431192661]
["TCGA-ACC","TCGA-OR-A5LR-01A","8:CLU:27598143:-:6:WDR46:33289012:-:fusion","CLU--WDR46",2.0,0.0,1.0,0.0,0.444,false,0.0229357798165]
["TCGA-ACC","TCGA-OR-A5LS-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.597,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LS-01A","14:DLK1:100734428:+:3:RPN1:128620593:-:fusion","DLK1--RPN1",4.0,0.0,2.0,0.0,0.313,false,0.0199004975124]
["TCGA-ACC","TCGA-OR-A5LS-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",83.0,2010.0,1976.0,1665.0,0.920815346899033,true,0.0]
["TCGA-ACC","TCGA-OR-A5LS-01A","5:HSPA9:138555360:-:21:SOD1:31659693:+:fusion","HSPA9--SOD1",2.0,0.0,3.0,0.0,0.339,false,0.0149253731343]
["TCGA-ACC","TCGA-OR-A5LT-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.574,true,"NA"]
["TCGA-ACC","TCGA-OR-A5LT-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.44,false,"NA"]
["TCGA-ACC","TCGA-OR-A5LT-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",25.0,2010.0,1976.0,1665.0,0.851792898095895,true,0.0]
["TCGA-ACC","TCGA-OR-A5LT-01A","8:CYHR1:144465571:-:11:AC132217.1:2129449:-:fusion","CYHR1--AC132217.1",2.0,0.0,1.0,0.0,0.247,false,0.0152284263959]
["TCGA-ACC","TCGA-OU-A5PI-01A","11:FDX1:110435958:AP000924.1:110366361:rev:+","FDX1--AP000924.1",1.0,0.0,1.0,0.0,0.847,false,"NA"]
["TCGA-ACC","TCGA-OU-A5PI-01A","16:VAC14:70772109:HYDIN:70974670:rev:-","VAC14--HYDIN",2.0,0.0,1.0,0.0,0.424,false,"NA"]
["TCGA-ACC","TCGA-OU-A5PI-01A","10:BCCIP:125833946:+:X:PGK1:78124874:+:fusion","BCCIP--PGK1",1.0,0.0,1.0,0.0,0.755,false,0.00990099009901]
["TCGA-ACC","TCGA-OU-A5PI-01A","17:ALDOC:28574710:-:19:GYS1:48970709:-:fusion","ALDOC--GYS1",2.0,0.0,1.0,0.0,0.214,false,0.0445544554455]
["TCGA-ACC","TCGA-OU-A5PI-01A","19:LDLR:11131812:+:17:CASKIN2:75501170:-:fusion","LDLR--CASKIN2",3.0,0.0,1.0,0.0,0.194,false,0.0445544554455]
["TCGA-ACC","TCGA-OU-A5PI-01A","20:CDS2:5186839:+:19:MAST3:18121685:+:fusion","CDS2--MAST3",2.0,0.0,1.0,0.0,0.68,false,0.00990099009901]
["TCGA-ACC","TCGA-OU-A5PI-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",53.0,2010.0,1976.0,1665.0,0.73264080935199,true,0.00990099009901]
["TCGA-ACC","TCGA-P6-A5OF-01A","16:CACNA1H:1200808:CHTF18:797839:rev:+","CACNA1H--CHTF18",2.0,0.0,1.0,0.0,0.691,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","1:EFNA1:155128069:FLAD1:154988105:rev:+","EFNA1--FLAD1",1.0,0.0,1.0,0.0,0.896,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.611,true,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","7:GTF2I:74755537:GTF2IRD1:74536167:rev:+","GTF2I--GTF2IRD1",1.0,0.0,1.0,0.0,0.844,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","9:TLN1:35713953:GBA2:35741064:rev:-","TLN1--GBA2",1.0,0.0,1.0,0.0,0.938,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.537,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OF-01A","11:AC132217.1:2129121:-:1:CCNL2:1392525:-:fusion","AC132217.1--CCNL2",2.0,0.0,1.0,0.0,0.168,false,0.0326086956522]
["TCGA-ACC","TCGA-P6-A5OF-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.445,false,0.00473933649289]
["TCGA-ACC","TCGA-P6-A5OF-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",8.0,0.0,205.0,0.0,0.362,false,0.00947867298578]
["TCGA-ACC","TCGA-P6-A5OF-01A","19:SBNO2:1147309:-:19:SCAF1:49657761:+:strandcross","SBNO2--SCAF1",1.0,0.0,1.0,0.0,0.627,false,0.0036231884058]
["TCGA-ACC","TCGA-P6-A5OF-01A","4:CAMK2D:113454087:-:8:AP003352.1:98041726:+:fusion","CAMK2D--AP003352.1",3.0,10515.0,3.0,3.0,0.231,true,0.0253623188406]
["TCGA-ACC","TCGA-P6-A5OF-01A","6:EEF1A1:73518354:-:10:CYP17A1:102832680:-:fusion","EEF1A1--CYP17A1",1.0,0.0,1.0,0.0,0.931,false,0.0]
["TCGA-ACC","TCGA-P6-A5OF-01A","8:THEM6:142736495:+:14:MEG3:100835736:+:fusion","THEM6--MEG3",5.0,0.0,1.0,0.0,0.349,false,0.0144927536232]
["TCGA-ACC","TCGA-P6-A5OG-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",12.0,0.0,1758.0,0.0,0.453,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OG-01A","1:RNF2:185045649:C1orf21:184477386:rev:+","RNF2--C1orf21",1.0,0.0,4.0,0.0,0.907,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.998,true,"NA"]
["TCGA-ACC","TCGA-P6-A5OG-01A","7:TRBJ2-3:142796895:AC245427.1:142791694:rev:+","TRBJ2-3--AC245427.1",4.0,38.0,5.0,4.0,0.732,true,"NA"]
["TCGA-ACC","TCGA-P6-A5OG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.773,false,"NA"]
["TCGA-ACC","TCGA-P6-A5OG-01A","11:ATG13:46672660:+:22:MYH9:36285953:-:fusion","ATG13--MYH9",2.0,0.0,1.0,0.0,0.372,false,0.00588235294118]
["TCGA-ACC","TCGA-P6-A5OG-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",4.0,0.0,297.0,0.0,0.269,false,0.00882352941176]
["TCGA-ACC","TCGA-P6-A5OG-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",2.0,187.0,145.0,16.0,0.372,false,0.00588235294118]
["TCGA-ACC","TCGA-PA-A5YG-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.416,false,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.423,true,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","19:NFIC:3449139:NCLN:3198817:rev:+","NFIC--NCLN",1.0,0.0,1.0,0.0,0.861,false,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","1:ZBTB8OS:32633262:RNF19B:32942459:rev:-","ZBTB8OS--RNF19B",1.0,1210.0,48.0,33.0,0.835,false,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.445,true,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.779667335611428,false,"NA"]
["TCGA-ACC","TCGA-PA-A5YG-01A","13:COL4A2:110357552:+:13:COL4A1:110214015:-:strandcross","COL4A2--COL4A1",1.0,29.0,12.0,2.0,0.786,false,0.00319488817891]
["TCGA-ACC","TCGA-PA-A5YG-01A","17:ACTG1:81510479:-:14:CFL2:34712977:-:fusion","ACTG1--CFL2",2.0,0.0,8.0,0.0,0.438,false,0.00958466453674]
["TCGA-ACC","TCGA-PA-A5YG-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",30.0,2010.0,1976.0,1665.0,0.867014902404139,true,0.00319488817891]
["TCGA-ACC","TCGA-PA-A5YG-01A","8:NCALD:102069989:-:8:LAPTM4B:97851397:+:strandcross","NCALD--LAPTM4B",3.0,786.0,15.0,15.0,0.354,true,0.0]
["TCGA-ACC","TCGA-PK-A5H8-01A","12:GATC:120446829:AL021546.1:120438379:rev:+","GATC--AL021546.1",113.0,29.0,14.0,14.0,0.617565910899201,true,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","16:GLG1:74451959:RNU6-758P:75286800:rev:-","GLG1--RNU6-758P",2.0,149.0,27.0,0.0,0.424,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",5.0,0.0,423.0,0.0,0.524,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","19:MAP2K2:4099990:PLIN3:4844793:rev:-","MAP2K2--PLIN3",2.0,280.0,119.0,36.0,0.465,true,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","19:SBNO2:1122894:MKNK2:2041204:rev:-","SBNO2--MKNK2",3.0,0.0,63.0,0.0,0.444,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","20:CPNE1:35626044:AL035420.2:36088192:rev:-","CPNE1--AL035420.2",3.0,378.0,71.0,4.0,0.406,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.475,true,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.741,true,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",22.0,210.0,4870.0,17.0,0.870809836591879,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H8-01A","10:CYP17A1:102832511:-:19:VASP:45523841:+:fusion","CYP17A1--VASP",2.0,0.0,1.0,0.0,0.378,false,0.0132158590308]
["TCGA-ACC","TCGA-PK-A5H8-01A","14:DLK1:100732183:+:7:TMEM184A:1547181:-:fusion","DLK1--TMEM184A",3.0,0.0,1.0,0.0,0.297,false,0.0176211453744]
["TCGA-ACC","TCGA-PK-A5H8-01A","6:DNPH1:43226033:-:14:DLK1:100734648:+:fusion","DNPH1--DLK1",2.0,0.0,1.0,0.0,0.418,false,0.0132158590308]
["TCGA-ACC","TCGA-PK-A5H8-01A","8:PLPBP:37766355:+:16:CHMP1A:89647331:-:fusion","PLPBP--CHMP1A",1.0,70.0,43.0,10.0,0.886,false,0.00440528634361]
["TCGA-ACC","TCGA-PK-A5H8-01A","9:AL359636.1:122416885:+:X:MAGED1:51900182:+:fusion","AL359636.1--MAGED1",14.0,1561.0,1.0,1.0,0.396,true,0.0132158590308]
["TCGA-ACC","TCGA-PK-A5H8-01A","X:SNX12:71061028:-:5:ATG10:82276145:+:fusion","SNX12--ATG10",2.0,285.0,15.0,12.0,0.242,true,0.0176211453744]
["TCGA-ACC","TCGA-PK-A5H9-01A","12:FMNL3:49661966:FAIM2:49870653:rev:-","FMNL3--FAIM2",1.0,0.0,1.0,0.0,0.872,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H9-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",3.0,0.0,147.0,0.0,0.5,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H9-01A","19:ZNF780A:40069152:C19orf47:40343805:rev:-","ZNF780A--C19orf47",2.0,1.0,9.0,0.0,0.439,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.939,true,"NA"]
["TCGA-ACC","TCGA-PK-A5H9-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.747,false,"NA"]
["TCGA-ACC","TCGA-PK-A5H9-01A","10:ANAPC16:72233615:+:1:AL592146.2:204131062:+:fusion","ANAPC16--AL592146.2",8.0,48.0,1.0,0.0,0.199,false,0.0288713910761]
["TCGA-ACC","TCGA-PK-A5H9-01A","10:PSAP:71818617:-:9:ALDOB:101425042:-:fusion","PSAP--ALDOB",3.0,0.0,1.0,0.0,0.193,false,0.0288713910761]
["TCGA-ACC","TCGA-PK-A5H9-01A","11:EIF4G2:10798992:-:14:RBM23:22901733:-:fusion","EIF4G2--RBM23",2.0,81.0,1.0,0.0,0.558,false,0.010498687664]
["TCGA-ACC","TCGA-PK-A5H9-01A","11:FTH1:61967458:-:7:ACTB:5530604:-:fusion","FTH1--ACTB",3.0,1.0,28.0,0.0,0.179,false,0.0288713910761]
["TCGA-ACC","TCGA-PK-A5H9-01A","19:MCOLN1:7528970:+:17:SLC25A11:4940251:-:fusion","MCOLN1--SLC25A11",24.0,0.0,3.0,0.0,0.71713131349729,false,0.00787401574803]
["TCGA-ACC","TCGA-PK-A5H9-01A","1:THRAP3:36224505:+:1:TNNI1:201415254:-:strandcross","THRAP3--TNNI1",1.0,0.0,1.0,0.0,0.997,false,0.0]
["TCGA-ACC","TCGA-PK-A5H9-01A","4:FGB:154567820:+:12:A2M:9101494:-:fusion","FGB--A2M",4.0,0.0,5.0,0.0,0.639,false,0.010498687664]
["TCGA-ACC","TCGA-PK-A5H9-01A","4:FGG:154604897:-:9:ENG:127827186:-:fusion","FGG--ENG",2.0,0.0,1.0,0.0,0.446,false,0.0157480314961]
["TCGA-ACC","TCGA-PK-A5HA-01A","19:EPN1:55675435:U2AF2:55663606:rev:+","EPN1--U2AF2",1.0,2.0,2.0,1.0,0.825,false,"NA"]
["TCGA-ACC","TCGA-PK-A5HA-01A","21:DIP2A:46550744:PCNT:46431529:rev:+","DIP2A--PCNT",1.0,0.0,1.0,0.0,0.916,false,"NA"]
["TCGA-ACC","TCGA-PK-A5HA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.877,true,"NA"]
["TCGA-ACC","TCGA-PK-A5HA-01A","11:AC132217.1:2129921:-:21:APP:25897673:-:fusion","AC132217.1--APP",1.0,1.0,1.0,0.0,0.868,false,0.00350877192982]
["TCGA-ACC","TCGA-PK-A5HA-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",2.0,1067.0,394.0,191.0,0.289,false,0.0140350877193]
["TCGA-ACC","TCGA-PK-A5HA-01A","1:CAP1:40072271:+:11:TMPRSS4:118107774:+:fusion","CAP1--TMPRSS4",7.0,1.0,121.0,0.0,0.185,false,0.0245614035088]
["TCGA-ACC","TCGA-PK-A5HA-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",10.0,2010.0,1976.0,1665.0,0.619,true,0.00350877192982]
["TCGA-ACC","TCGA-PK-A5HA-01A","6:ZNRD1ASP:30008632:-:6:HLA-C:31270331:-:rev","ZNRD1ASP--HLA-C",2.0,164.0,16.0,11.0,0.778,true,0.00350877192982]
["TCGA-ACC","TCGA-PK-A5HB-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.462,false,"NA"]
["TCGA-ACC","TCGA-PK-A5HB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.89,true,"NA"]
["TCGA-ACC","TCGA-PK-A5HB-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.782,false,"NA"]
["TCGA-ACC","TCGA-PK-A5HB-01A","16:AARS:70262346:-:19:ACTN4:38723937:+:fusion","AARS--ACTN4",12.0,0.0,10.0,0.0,0.382,false,0.0108695652174]
["TCGA-ACC","TCGA-PK-A5HB-01A","1:DHCR24:54849633:-:1:B4GALT3:161174049:-:rev","DHCR24--B4GALT3",2.0,0.0,5.0,0.0,0.177,false,0.0217391304348]
["TCGA-ACC","TCGA-PK-A5HB-01A","1:RCC1:28506084:+:1:ITGB3BP:63454968:-:strandcross","RCC1--ITGB3BP",1.0,1.0,1.0,0.0,0.938,false,0.0]
["TCGA-ACC","TCGA-PK-A5HB-01A","2:MCFD2:46910780:-:19:PIH1D1:49448062:-:fusion","MCFD2--PIH1D1",1.0,1380.0,1.0,0.0,0.678,false,0.0]
["TCGA-ACC","TCGA-PK-A5HB-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",8.0,2010.0,1976.0,1665.0,0.891,true,0.0]
["TCGA-BLCA","TCGA-2F-A9KO-01A","12:OAS2:112978785:OAS1:112916509:rev:+","OAS2--OAS1",1.0,4.0,11.0,3.0,0.921,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KO-01A","19:AC008764.4:16659955:SMIM7:16660130:rev:-","AC008764.4--SMIM7",1.0,0.0,1.0,0.0,0.97,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KO-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.785,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KO-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",4.0,0.0,182.0,0.0,0.489,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.6,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KO-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.398,false,0.00884955752212]
["TCGA-BLCA","TCGA-2F-A9KO-01A","16:PIEZO1:88723095:-:15:RPLP1:69452819:+:fusion","PIEZO1--RPLP1",6.0,0.0,1.0,0.0,0.193,false,0.037037037037]
["TCGA-BLCA","TCGA-2F-A9KO-01A","17:SHPK:3630205:-:11:GUCY1A2:106986131:-:fusion","SHPK--GUCY1A2",1.0,0.0,1.0,0.0,0.693,false,0.00411522633745]
["TCGA-BLCA","TCGA-2F-A9KO-01A","3:TP63:189897268:+:8:ASPH:61584029:-:fusion","TP63--ASPH",4.0,0.0,19.0,0.0,0.204,false,0.0265486725664]
["TCGA-BLCA","TCGA-2F-A9KO-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",5.0,4574.0,830.0,638.0,0.404,true,0.0246913580247]
["TCGA-BLCA","TCGA-2F-A9KO-01A","6:HLA-E:30489595:+:6:HLA-B:31356957:-:strandcross","HLA-E--HLA-B",6.0,10194.0,137.0,137.0,0.322,true,0.0176991150442]
["TCGA-BLCA","TCGA-2F-A9KO-01A","8:CPSF1:144396348:-:14:DHRS2:23638827:+:fusion","CPSF1--DHRS2",14.0,0.0,1.0,0.0,0.209,false,0.037037037037]
["TCGA-BLCA","TCGA-2F-A9KP-01A","10:UPF2:12028745:NUDT5:12179132:rev:-","UPF2--NUDT5",1.0,1.0,2.0,0.0,0.987,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KP-01A","17:NCOR1:16171803:CENPV:16344711:rev:-","NCOR1--CENPV",1.0,0.0,1.0,0.0,0.832,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KP-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.848,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KP-01A","2:PLB1:28496169:BABAM2:28298338:rev:+","PLB1--BABAM2",1.0,0.0,1.0,0.0,0.824,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KP-01A","11:RPLP2:812871:+:19:P2RY11:10112104:+:fusion","RPLP2--P2RY11",24.0,5819.0,29.0,16.0,0.856973838586958,false,0.00531914893617]
["TCGA-BLCA","TCGA-2F-A9KP-01A","12:TMTC2:83134302:+:6:SNX14:85543760:-:fusion","TMTC2--SNX14",3.0,3.0,174.0,0.0,0.209,false,0.0372340425532]
["TCGA-BLCA","TCGA-2F-A9KP-01A","17:ERBB2:39724010:+:17:TEPSIN:81234234:-:strandcross","ERBB2--TEPSIN",5.0,0.0,2.0,0.0,0.324,false,0.0212765957447]
["TCGA-BLCA","TCGA-2F-A9KP-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",2.0,315.0,342.0,224.0,0.706,false,0.00531914893617]
["TCGA-BLCA","TCGA-2F-A9KQ-01A","19:LDLR:11089615:DNM2:10772479:rev:+","LDLR--DNM2",1.0,0.0,1.0,0.0,0.826,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KQ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.761,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KQ-01A","5:UTP15:73565912:TNPO1:72882467:rev:+","UTP15--TNPO1",1.0,0.0,1.0,0.0,0.939,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","16:FBXL19:30930584:MIR762HG:30894548:rev:+","FBXL19--MIR762HG",1.0,0.0,1.0,0.0,0.915,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",3.0,0.0,267.0,0.0,0.418,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.953,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",1.0,298.0,112.0,87.0,0.949,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.413,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KR-01A","12:PXN:120212314:-:17:KRT15:41518461:-:fusion","PXN--KRT15",2.0,1.0,4.0,0.0,0.515,false,0.0116279069767]
["TCGA-BLCA","TCGA-2F-A9KR-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",6.0,0.0,205.0,0.0,0.178,false,0.0184049079755]
["TCGA-BLCA","TCGA-2F-A9KR-01A","4:MRFAP1:6641258:+:19:AC020909.2:50487638:-:fusion","MRFAP1--AC020909.2",13.0,0.0,12.0,0.0,0.542,false,0.0116279069767]
["TCGA-BLCA","TCGA-2F-A9KT-01A","12:NCOR2:124419957:UBC:124913774:rev:-","NCOR2--UBC",1.0,39.0,41.0,9.0,0.872,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",4.0,0.0,423.0,0.0,0.421,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.476,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","19:ZNF738:21375964:ZNF430:21056631:rev:+","ZNF738--ZNF430",1.0,3551.0,102.0,73.0,0.861,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.933,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.419,true,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","8:CPQ:96645402:SDC2:96608335:rev:+","CPQ--SDC2",1.0,1.0,6.0,0.0,0.911,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KT-01A","13:FARP1:98213413:+:13:STK24:98519473:-:strandcross","FARP1--STK24",3.0,6.0,2.0,1.0,0.676,false,0.0]
["TCGA-BLCA","TCGA-2F-A9KT-01A","20:NCOA3:47628023:+:13:INTS6-AS1:51454003:+:fusion","NCOA3--INTS6-AS1",1.0,0.0,1.0,0.0,0.92,false,0.0]
["TCGA-BLCA","TCGA-2F-A9KT-01A","20:RPRD1B:38048481:+:20:AL031668.1:34015107:-:strandcross","RPRD1B--AL031668.1",1.0,0.0,1.0,0.0,0.938,false,0.0]
["TCGA-BLCA","TCGA-2F-A9KW-01A","15:AC124312.1:24982437:SNRPN:24974311:rev:+","AC124312.1--SNRPN",1.0,13.0,26.0,8.0,0.938,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KW-01A","16:CDH1:68801893:CDH3:68698191:rev:+","CDH1--CDH3",1.0,0.0,1.0,0.0,0.972,false,"NA"]
["TCGA-BLCA","TCGA-2F-A9KW-01A","7:CLDN4:73799829:+:16:FAM192A:57173869:-:fusion","CLDN4--FAM192A",1.0,0.0,1.0,0.0,0.686,false,0.0168539325843]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","17:AC068152.1:47099835:CDC27:47122600:rev:-","AC068152.1--CDC27",1.0,0.0,1.0,0.0,0.829,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","19:NUDT19:32692674:DPY19L3:32432716:rev:+","NUDT19--DPY19L3",1.0,0.0,1.0,0.0,0.829,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.465,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","2:TGFBRAP1:105296356:FHL2:105386540:rev:-","TGFBRAP1--FHL2",1.0,3.0,5.0,1.0,0.868,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","8:PLAT:42185081:AC083973.1:42233859:rev:-","PLAT--AC083973.1",2.0,0.0,1.0,0.0,0.722,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","19:ILF3:10654487:+:6:MAPK13:36131271:+:fusion","ILF3--MAPK13",1.0,0.0,1.0,0.0,0.969,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA7M-01A","1:RASAL2:178443229:+:7:AC078845.1:136242150:+:fusion","RASAL2--AC078845.1",1.0,0.0,1.0,0.0,0.923,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA7N-01A","5:TBCA:77776205:AP3B1:78116234:rev:-","TBCA--AP3B1",1.0,0.0,1.0,0.0,0.803,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7N-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.207,true,0.0510948905109]
["TCGA-BLCA","TCGA-4Z-AA7O-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.53,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7O-01A","1:RPRD2:150460317:PRPF3:150349157:rev:+","RPRD2--PRPF3",1.0,0.0,2.0,0.0,0.943,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7O-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.855,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7O-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.206,false,0.00787401574803]
["TCGA-BLCA","TCGA-4Z-AA7O-01A","22:MYH9:36289085:-:16:MYH11:15721051:-:fusion","MYH9--MYH11",4.0,867.0,5.0,5.0,0.212,true,0.0398230088496]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.973,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.42,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","17:LINC00511:72592203:SLC39A11:72736719:rev:-","LINC00511--SLC39A11",1.0,6.0,5.0,3.0,0.834,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,1126.0,0.0,0.449,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","19:NLRP2:54985217:KIR3DL2:54865805:rev:+","NLRP2--KIR3DL2",1.0,0.0,1.0,0.0,0.895,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",3.0,0.0,147.0,0.0,0.467,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","1:CNIH3:224435187:CNIH4:224365879:rev:+","CNIH3--CNIH4",2.0,0.0,4.0,0.0,0.427,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","1:LDLRAP1:25543786:TMEM57:25498264:rev:+","LDLRAP1--TMEM57",1.0,1.0,2.0,1.0,0.839,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","1:SMG5:156272320:C1orf61:156404601:rev:-","SMG5--C1orf61",1.0,0.0,1.0,0.0,0.98,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","7:KMT2E:105041023:LHFPL3:104906187:rev:+","KMT2E--LHFPL3",1.0,2.0,3.0,2.0,0.843,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.613,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",11.0,0.0,1499.0,0.0,0.333,false,0.0174418604651]
["TCGA-BLCA","TCGA-4Z-AA7Q-01A","2:IGKV2D-29:89948269:+:2:IGKJ4:88860922:-:strandcross","IGKV2D-29--IGKJ4",9.0,841.0,41.0,35.0,0.31,true,0.0184501845018]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",2.0,2052.0,512.0,403.0,0.877,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","17:ATP5H:75046925:JPT1:75148671:rev:-","ATP5H--JPT1",1.0,0.0,5.0,0.0,0.97,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",16.0,9462.0,7336.0,7317.0,0.834005756918251,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","5:KIF2A:62306536:ZSWIM6:61472681:rev:+","KIF2A--ZSWIM6",1.0,0.0,1.0,0.0,0.832,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.677989156744091,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",8.0,0.0,1499.0,0.0,0.34,false,0.00549450549451]
["TCGA-BLCA","TCGA-4Z-AA7R-01A","20:SLC9A8:49815189:+:17:TOM1L2:17850952:-:fusion","SLC9A8--TOM1L2",2.0,0.0,1.0,0.0,0.381,false,0.0145631067961]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.686,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","12:CPSF6:69262562:+:16:CHMP1A:89647331:-:fusion","CPSF6--CHMP1A",5.0,94.0,88.0,34.0,0.978,true,0.00526315789474]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","12:CPSF6:69262562:+:1:CCNL2:1390865:-:fusion","CPSF6--CCNL2",3.0,19.0,5.0,5.0,0.995,true,0.00526315789474]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","12:CPSF6:69262562:+:9:C9orf3:95086682:+:fusion","CPSF6--C9orf3",2.0,134.0,130.0,48.0,0.779,true,0.0105263157895]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","17:CRLF3:30784307:-:17:AATF:36950214:+:strandcross","CRLF3--AATF",1.0,0.0,1.0,0.0,0.918,false,0.0105263157895]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","17:ERBB2:39715939:+:11:CTTN:70422940:+:fusion","ERBB2--CTTN",2.0,7.0,5.0,3.0,0.741,false,0.0105263157895]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","17:ERBB2:39715939:+:17:JUP:41755432:-:strandcross","ERBB2--JUP",5.0,56.0,33.0,26.0,0.248,true,0.0210526315789]
["TCGA-BLCA","TCGA-4Z-AA7S-01A","17:STARD3:39637231:+:8:TMEM71:132747057:-:fusion","STARD3--TMEM71",1.0,0.0,1.0,0.0,0.829,false,0.0105263157895]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.671,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.851,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","19:NCLN:3186214:THOP1:2805016:rev:+","NCLN--THOP1",1.0,0.0,1.0,0.0,0.969,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,495.0,0.0,0.449,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","1:PYGO2:154957026:GON4L:155784389:rev:-","PYGO2--GON4L",3.0,4067.0,204.0,203.0,0.46,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.878203381354104,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",10.0,0.0,1499.0,0.0,0.413,false,0.0175438596491]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","12:SCN8A:51689096:+:12:KCNC2:75051317:-:strandcross","SCN8A--KCNC2",1.0,0.0,1.0,0.0,0.818,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.409,true,0.0075]
["TCGA-BLCA","TCGA-4Z-AA7W-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",8.0,0.0,192.0,0.0,0.472,false,0.0075]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","11:KDM2A:67121358:C11orf80:66756353:rev:+","KDM2A--C11orf80",1.0,0.0,2.0,0.0,0.955,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","11:UBE2L6:57560337:LPXN:58527723:rev:-","UBE2L6--LPXN",1.0,0.0,1.0,0.0,0.82,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","1:TMEM57:25446903:TMEM50A:25351626:rev:+","TMEM57--TMEM50A",1.0,0.0,1.0,0.0,0.99,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.624,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.42,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.385,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","19:AC008894.1:16104101:-:19:SGTA:2759294:-:reg","AC008894.1--SGTA",1.0,6.0,1.0,0.0,0.843,false,0.0140186915888]
["TCGA-BLCA","TCGA-4Z-AA7Y-01A","4:MRFAP1:6641258:+:3:CNBP:129171538:-:fusion","MRFAP1--CNBP",32.0,0.0,86.0,0.0,0.216165463378685,false,0.0327102803738]
["TCGA-BLCA","TCGA-4Z-AA80-01A","12:FBRSL1:132508350:NOC4L:132150981:rev:+","FBRSL1--NOC4L",1.0,2.0,8.0,0.0,0.91,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.528,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.969,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","1:SSU72:1574478:GNB1:1825499:rev:-","SSU72--GNB1",1.0,0.0,3.0,0.0,0.882,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","22:C22orf39:19397992:UFD1:19455768:rev:-","C22orf39--UFD1",1.0,0.0,1.0,0.0,0.809,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.49,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","8:PUF60:143829280:SHARPIN:144103225:rev:-","PUF60--SHARPIN",1.0,0.0,1.0,0.0,0.929,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.517,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA80-01A","13:LRCH1:46728984:+:13:PHF11:49506635:+:reg","LRCH1--PHF11",1.0,0.0,1.0,0.0,0.942,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA80-01A","3:PLCL2:16885366:+:4:UGT2A2:69599394:-:fusion","PLCL2--UGT2A2",1.0,0.0,1.0,0.0,0.881,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA80-01A","7:ATP5J2:99458195:-:5:COX7C:86617973:+:fusion","ATP5J2--COX7C",6.0,0.0,13.0,0.0,0.411,false,0.0298507462687]
["TCGA-BLCA","TCGA-4Z-AA81-01A","11:TMEM123:102448812:MMP7:102520804:rev:-","TMEM123--MMP7",1.0,0.0,2.0,0.0,0.823,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","15:MYO5A:52336463:FAM214A:52582307:rev:-","MYO5A--FAM214A",1.0,0.0,1.0,0.0,0.862,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","19:RPL13A:49487644:SNRNP70:49107625:rev:+","RPL13A--SNRNP70",2.0,1.0,2.0,0.0,0.448,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","20:RNF114:49936552:ZFAS1:49289045:rev:+","RNF114--ZFAS1",1.0,3.0,10.0,0.0,0.862,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.6,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","6:HLA-C:31269338:HLA-B:31354296:rev:-","HLA-C--HLA-B",1.0,7416.0,13.0,13.0,0.843,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA81-01A","12:AC006064.4:6538141:-:1:ELF3:202015209:+:fusion","AC006064.4--ELF3",1.0,7.0,2.0,0.0,0.71,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA82-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.499,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA82-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.435,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA82-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",1.0,397.0,152.0,123.0,0.991,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA82-01A","1:MKNK1:46571417:STIL:47263113:rev:-","MKNK1--STIL",1.0,1.0,2.0,0.0,0.867,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA82-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.98,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA82-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",16.0,0.0,1499.0,0.0,0.769177288785625,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA83-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.86,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA83-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.81,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA83-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.770092221065118,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA83-01A","7:BRAF:140777991:-:7:SUGCT:40860316:+:strandcross","BRAF--SUGCT",3.0,0.0,70.0,0.0,0.447,false,0.0136054421769]
["TCGA-BLCA","TCGA-4Z-AA84-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",4.0,0.0,267.0,0.0,0.527,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA84-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",6.0,4613.0,511.0,496.0,0.413,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA84-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.971,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA84-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.48,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA84-01A","15:STARD9:42630146:+:22:MB:35617265:-:fusion","STARD9--MB",8.0,2569.0,85.0,85.0,0.319,true,0.027027027027]
["TCGA-BLCA","TCGA-4Z-AA84-01A","17:PTRH2:59707371:-:17:VMP1:59808796:+:strandcross","PTRH2--VMP1",1.0,1.0,2.0,1.0,0.963,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA84-01A","1:AP4B1:113901755:-:1:PIFO:111346910:+:strandcross","AP4B1--PIFO",2.0,0.0,1.0,0.0,0.233,false,0.0324324324324]
["TCGA-BLCA","TCGA-4Z-AA84-01A","1:RCC1:28508160:+:1:SERINC2:31432967:+:reg","RCC1--SERINC2",3.0,73.0,7.0,7.0,0.556,true,0.00609756097561]
["TCGA-BLCA","TCGA-4Z-AA84-01A","1:UCK2:165827932:+:2:MITD1:99174016:-:fusion","UCK2--MITD1",2.0,0.0,1.0,0.0,0.425,false,0.0162162162162]
["TCGA-BLCA","TCGA-4Z-AA84-01A","5:CTNNA1:138753510:+:5:LARP1:154811247:+:reg","CTNNA1--LARP1",1.0,0.0,1.0,0.0,0.731,false,0.00540540540541]
["TCGA-BLCA","TCGA-4Z-AA86-01A","12:NDUFA9:4685325:TIGAR:4331280:rev:+","NDUFA9--TIGAR",1.0,0.0,1.0,0.0,0.891,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",9.0,0.0,1758.0,0.0,0.413,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","19:UBA2:34428570:PDCD2L:34421519:rev:+","UBA2--PDCD2L",1.0,2.0,5.0,0.0,0.931,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.729,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","2:ZAP70:97735456:ANKRD36:97241266:rev:+","ZAP70--ANKRD36",1.0,0.0,1.0,0.0,0.842,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","9:CDK5RAP2:120388876:PHF19:120868356:rev:-","CDK5RAP2--PHF19",4.0,0.0,135.0,0.0,0.406,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.501,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA86-01A","11:TCIRG1:68045102:+:16:MAZ:29811006:+:fusion","TCIRG1--MAZ",1.0,0.0,1.0,0.0,0.971,false,0.00278551532033]
["TCGA-BLCA","TCGA-4Z-AA86-01A","17:ACTG1:81510479:-:5:VDAC1:133972862:-:fusion","ACTG1--VDAC1",3.0,0.0,14.0,0.0,0.278,false,0.0222841225627]
["TCGA-BLCA","TCGA-4Z-AA86-01A","21:ITSN1:33642713:+:21:PICSAR:44999656:-:strandcross","ITSN1--PICSAR",4.0,0.0,1.0,0.0,0.723,false,0.008356545961]
["TCGA-BLCA","TCGA-4Z-AA86-01A","2:IGKC:88857161:-:10:PLAU:73913539:+:fusion","IGKC--PLAU",9.0,0.0,21.0,0.0,0.615,false,0.0111420612813]
["TCGA-BLCA","TCGA-4Z-AA86-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",6.0,4574.0,830.0,638.0,0.721,true,0.008356545961]
["TCGA-BLCA","TCGA-4Z-AA86-01A","7:AC104692.1:152367260:+:7:PSPH:56021231:-:strandcross","AC104692.1--PSPH",1.0,0.0,2.0,0.0,0.797,false,0.008356545961]
["TCGA-BLCA","TCGA-4Z-AA87-01A","16:AC004381.2:20718493:ACSM3:20679158:rev:+","AC004381.2--ACSM3",1.0,2.0,3.0,1.0,0.836,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","1:C1orf159:1116060:C1QTNF12:1244497:rev:-","C1orf159--C1QTNF12",1.0,2.0,11.0,1.0,0.944,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","1:RCC1:28508160:PPP1R8:27838699:rev:+","RCC1--PPP1R8",1.0,0.0,1.0,0.0,0.914,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.938,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","2:ATL2:38343268:DHX57:38802915:rev:-","ATL2--DHX57",1.0,0.0,1.0,0.0,0.885,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","4:AC108062.1:128293122:LARP1B:128222349:rev:+","AC108062.1--LARP1B",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","5:CSNK1A1:149525045:PDGFRB:150137053:rev:-","CSNK1A1--PDGFRB",2.0,0.0,1.0,0.0,0.616,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",20.0,210.0,4870.0,17.0,0.691154917207199,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA87-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.166,false,0.016393442623]
["TCGA-BLCA","TCGA-4Z-AA87-01A","11:HSPA8:123058252:-:8:COX6C:99894062:-:fusion","HSPA8--COX6C",2.0,0.0,5.0,0.0,0.239,false,0.0265151515152]
["TCGA-BLCA","TCGA-4Z-AA87-01A","16:AC106779.1:56729506:-:7:C7orf55-LUC7L2:139376062:+:fusion","AC106779.1--C7orf55-LUC7L2",2.0,0.0,1.0,0.0,0.77,false,0.00378787878788]
["TCGA-BLCA","TCGA-4Z-AA87-01A","17:EPN2:19237531:+:18:GAREM1:32310323:-:fusion","EPN2--GAREM1",1.0,0.0,1.0,0.0,0.753,false,0.00378787878788]
["TCGA-BLCA","TCGA-4Z-AA87-01A","4:HERC6:88379120:+:4:PTPN13:86732400:+:rev","HERC6--PTPN13",1.0,0.0,1.0,0.0,0.989,false,0.0]
["TCGA-BLCA","TCGA-4Z-AA89-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.432,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA89-01A","16:LONP2:48303305:PHKB:47663677:rev:+","LONP2--PHKB",1.0,0.0,1.0,0.0,0.878,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA89-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.786,true,"NA"]
["TCGA-BLCA","TCGA-4Z-AA89-01A","7:AC073111.3:150388501:AC073111.4:150379329:rev:+","AC073111.3--AC073111.4",1.0,0.0,2.0,0.0,0.911,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA89-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.60438187708942,false,"NA"]
["TCGA-BLCA","TCGA-4Z-AA89-01A","11:HSPA8:123058252:-:3:EAF1-AS1:15443477:-:fusion","HSPA8--EAF1-AS1",2.0,0.0,1.0,0.0,0.268,false,0.0254237288136]
["TCGA-BLCA","TCGA-4Z-AA89-01A","2:SDC1:20200797:-:2:NIFK:121735750:-:rev","SDC1--NIFK",2.0,0.0,1.0,0.0,0.244,false,0.0254237288136]
["TCGA-BLCA","TCGA-5N-A9KI-01A","19:MAP2K2:4099990:PLIN3:4844793:rev:-","MAP2K2--PLIN3",1.0,280.0,119.0,36.0,0.962,true,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","21:LINC00649:33943145:IFNGR2:33426884:rev:+","LINC00649--IFNGR2",2.0,1150.0,53.0,15.0,0.501,false,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","21:TMPRSS3:42395324:U2AF1:43095743:rev:-","TMPRSS3--U2AF1",1.0,0.0,1.0,0.0,0.891,false,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.833,true,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","6:HLA-C:31269338:HLA-B:31354296:rev:-","HLA-C--HLA-B",2.0,7416.0,13.0,13.0,0.819,true,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.593,false,"NA"]
["TCGA-BLCA","TCGA-5N-A9KI-01A","11:STT3A:125620888:+:19:AC011558.1:1039064:-:fusion","STT3A--AC011558.1",4.0,2452.0,2.0,1.0,0.281,false,0.0179211469534]
["TCGA-BLCA","TCGA-5N-A9KI-01A","1:NASP:45617591:+:1:IFI6:27668375:-:strandcross","NASP--IFI6",2.0,0.0,5.0,0.0,0.352,false,0.010752688172]
["TCGA-BLCA","TCGA-5N-A9KM-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",19.0,0.0,1758.0,0.0,0.636545213747934,false,"NA"]
["TCGA-BLCA","TCGA-5N-A9KM-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",2.0,4613.0,511.0,496.0,0.452,true,"NA"]
["TCGA-BLCA","TCGA-5N-A9KM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.973,true,"NA"]
["TCGA-BLCA","TCGA-5N-A9KM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.813794186424096,false,"NA"]
["TCGA-BLCA","TCGA-5N-A9KM-01A","X:LINC01560:47484823:+:19:TMEM145:42313325:+:fusion","LINC01560--TMEM145",2.0,0.0,7.0,0.0,0.252,false,0.0124378109453]
["TCGA-BLCA","TCGA-BL-A0C8-01A","10:ZRANB1:124966781:AL731577.2:124942457:rev:+","ZRANB1--AL731577.2",2.0,12.0,8.0,4.0,0.647,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","11:HSD17B12:43840064:AC068205.2:43830976:rev:+","HSD17B12--AC068205.2",3.0,28.0,21.0,12.0,0.593,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","12:AC008035.1:46571412:AC008014.1:46387747:rev:+","AC008035.1--AC008014.1",1.0,0.0,2.0,0.0,0.878,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","12:AC025263.2:69801721:RAB3IP:69800209:rev:+","AC025263.2--RAB3IP",7.0,87.0,56.0,45.0,0.924,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","12:AC078923.1:75692105:AC078820.1:75694975:rev:-","AC078923.1--AC078820.1",2.0,2.0,1.0,0.0,0.788,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","13:LMO7:75727098:AL137782.1:75621763:rev:+","LMO7--AL137782.1",3.0,40.0,23.0,19.0,0.92,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","14:HEATR5A:31345087:AL139353.1:31347907:rev:-","HEATR5A--AL139353.1",3.0,13.0,12.0,7.0,0.503,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","16:AC106886.5:30704315:SRCAP:30704064:rev:+","AC106886.5--SRCAP",1.0,22.0,17.0,13.0,0.855,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","17:FBF1:75912192:SRP68:76061574:rev:-","FBF1--SRP68",1.0,0.0,1.0,0.0,0.906,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","19:AC008878.3:7444454:ARHGEF18:7444204:rev:+","AC008878.3--ARHGEF18",2.0,0.0,2.0,0.0,0.745,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",3.0,0.0,423.0,0.0,0.407,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","1:AC118553.2:100061949:MFSD14A:100059878:rev:+","AC118553.2--MFSD14A",1.0,1.0,2.0,1.0,0.957,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","1:S100A6:153535949:S100A13:153619038:rev:-","S100A6--S100A13",1.0,0.0,1.0,0.0,0.878,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","1:SLC35A3:100015420:AC118553.2:99993537:rev:+","SLC35A3--AC118553.2",2.0,7.0,8.0,5.0,0.893,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","1:TSNAX:231542611:TSNAX-DISC1:231537213:rev:+","TSNAX--TSNAX-DISC1",8.0,42.0,35.0,27.0,0.975,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","20:TAF4:61997550:DIDO1:62914406:rev:-","TAF4--DIDO1",1.0,0.0,1.0,0.0,0.876,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","21:AF127577.4:15014344:NRIP1:15043574:rev:-","AF127577.4--NRIP1",30.0,94.0,69.0,50.0,0.886238992511501,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","22:PISD:31648101:PRR14L:31738911:rev:-","PISD--PRR14L",1.0,0.0,3.0,0.0,0.895,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.82,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","2:ARL5A:151803007:AC068547.1:151815199:rev:-","ARL5A--AC068547.1",2.0,7.0,3.0,2.0,0.429,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","2:MRPS5:95148885:ZNF514:95153259:rev:-","MRPS5--ZNF514",4.0,37.0,24.0,19.0,0.996,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","2:NPAS2:100949480:AC092168.2:100846836:rev:+","NPAS2--AC092168.2",1.0,0.0,2.0,0.0,0.835,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","3:AC138058.1:71288315:FOXP1:71299880:rev:-","AC138058.1--FOXP1",1.0,0.0,1.0,0.0,0.923,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","3:TTLL3:9813345:ARPC4-TTLL3:9810621:rev:+","TTLL3--ARPC4-TTLL3",1.0,1.0,1.0,0.0,0.936,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","5:AC008667.1:139685432:CXXC5:139665580:rev:+","AC008667.1--CXXC5",2.0,0.0,1.0,0.0,0.459,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","5:MATR3:139279129:SNHG4:139278327:rev:+","MATR3--SNHG4",6.0,51.0,31.0,26.0,0.799,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","6:MTHFD1L:151037117:PLEKHG1:150841035:rev:+","MTHFD1L--PLEKHG1",1.0,0.0,1.0,0.0,0.804,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","6:SNX14:85549723:AL589666.1:85558060:rev:-","SNX14--AL589666.1",1.0,1.0,2.0,1.0,0.889,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","6:TMEM14B:10755232:AL024498.2:10749202:rev:+","TMEM14B--AL024498.2",1.0,19.0,1.0,0.0,0.802,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","6:Z94721.2:167044576:FGFR1OP:167022409:rev:+","Z94721.2--FGFR1OP",2.0,12.0,5.0,4.0,0.715,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","7:AC006978.2:30366295:ZNRF2:30355728:rev:+","AC006978.2--ZNRF2",1.0,14.0,12.0,8.0,0.86,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","7:PILRA:100367617:PILRB:100367349:rev:+","PILRA--PILRB",1.0,0.0,2.0,0.0,0.845,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","8:AC110275.1:43018494:HOOK3:42906173:rev:+","AC110275.1--HOOK3",6.0,25.0,19.0,11.0,0.722,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","X:RNF128:106694408:CXorf57:106662015:rev:+","RNF128--CXorf57",1.0,0.0,1.0,0.0,0.855,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.635,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01A","12:METTL7A:50930291:+:17:AC145207.3:81843165:+:fusion","METTL7A--AC145207.3",2.0,5239.0,43.0,42.0,0.321,true,0.0743801652893]
["TCGA-BLCA","TCGA-BL-A0C8-01A","1:EVI5:92773906:-:15:PEAK1:77365225:-:fusion","EVI5--PEAK1",3.0,63.0,7.0,7.0,0.168,true,0.0592592592593]
["TCGA-BLCA","TCGA-BL-A0C8-01A","20:SOGA1:36802856:-:14:RPS6KA5:90978524:-:fusion","SOGA1--RPS6KA5",2.0,0.0,2.0,0.0,0.741,false,0.0165289256198]
["TCGA-BLCA","TCGA-BL-A0C8-01A","21:PDXK:43719381:+:21:ABCG1:42225671:+:rev","PDXK--ABCG1",1.0,0.0,1.0,0.0,0.898,false,0.0]
["TCGA-BLCA","TCGA-BL-A0C8-01A","22:SPECC1L:24302384:+:15:HACD3:65535721:+:fusion","SPECC1L--HACD3",4.0,1806.0,40.0,36.0,0.31,true,0.0518518518519]
["TCGA-BLCA","TCGA-BL-A0C8-01A","3:ARIH2:48924971:+:X:USP9X:41123471:+:fusion","ARIH2--USP9X",7.0,301.0,7.0,7.0,0.47,true,0.037037037037]
["TCGA-BLCA","TCGA-BL-A0C8-01A","3:RNF13:149961374:+:19:SCAF1:49654652:+:fusion","RNF13--SCAF1",2.0,1.0,10.0,0.0,0.226,false,0.0826446280992]
["TCGA-BLCA","TCGA-BL-A0C8-01A","5:GPX3:151028954:+:12:CHD4:6601530:-:fusion","GPX3--CHD4",4.0,0.0,34.0,0.0,0.248,false,0.016]
["TCGA-BLCA","TCGA-BL-A0C8-01A","5:SKP1:134158455:-:7:LINC00174:66423878:-:fusion","SKP1--LINC00174",3.0,0.0,1.0,0.0,0.41,false,0.030303030303]
["TCGA-BLCA","TCGA-BL-A0C8-01A","6:PCMT1:149773169:+:17:SPAG9:51079704:-:fusion","PCMT1--SPAG9",1.0,0.0,1.0,0.0,0.957,false,0.0]
["TCGA-BLCA","TCGA-BL-A0C8-01A","9:GOLM1:86035368:-:13:TPT1:45340184:-:fusion","GOLM1--TPT1",2.0,0.0,3.0,0.0,0.242,false,0.0826446280992]
["TCGA-BLCA","TCGA-BL-A0C8-01A","X:GPC3:133953050:-:16:PKD1:2091854:-:fusion","GPC3--PKD1",3.0,0.0,1.0,0.0,0.155,false,0.0757575757576]
["TCGA-BLCA","TCGA-BL-A0C8-01A","X:HPRT1:134486530:+:3:LRRC2:46551610:-:fusion","HPRT1--LRRC2",1.0,1.0,2.0,1.0,0.957,false,0.0]
["TCGA-BLCA","TCGA-BL-A0C8-01B","10:EEF1AKMT2:124760318:AC068896.1:124774782:rev:-","EEF1AKMT2--AC068896.1",1.0,4.0,4.0,2.0,0.893,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01B","12:AC025263.2:69801721:RAB3IP:69800209:rev:+","AC025263.2--RAB3IP",4.0,87.0,56.0,45.0,0.585,true,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01B","1:FAF1:50655442:EPS15:51458733:rev:-","FAF1--EPS15",1.0,87.0,2.0,0.0,0.959,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01B","5:TTC33:40746798:PRKAA1:40777586:rev:-","TTC33--PRKAA1",1.0,4.0,2.0,0.0,0.935,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01B","6:PRIM2:57326045:ZNF451:57141302:rev:+","PRIM2--ZNF451",1.0,0.0,2.0,0.0,0.824,false,"NA"]
["TCGA-BLCA","TCGA-BL-A0C8-01B","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",3.0,0.0,297.0,0.0,0.178,false,0.0872483221477]
["TCGA-BLCA","TCGA-BL-A0C8-01B","20:SOGA1:36802856:-:14:RPS6KA5:90978524:-:fusion","SOGA1--RPS6KA5",2.0,0.0,2.0,0.0,0.653,false,0.0201342281879]
["TCGA-BLCA","TCGA-BL-A0C8-01B","22:LINC01399:35194857:-:22:NCF4-AS1:36848017:-:rev","LINC01399--NCF4-AS1",2.0,1.0,2.0,1.0,0.658,false,0.0201342281879]
["TCGA-BLCA","TCGA-BL-A0C8-01B","9:FREM1:14851284:-:1:SLAMF7:160748194:+:fusion","FREM1--SLAMF7",2.0,1.0,2.0,1.0,0.549,false,0.0335570469799]
["TCGA-BLCA","TCGA-BL-A13I-01A","12:DYNLL1:120498237:AC002563.1:119700696:rev:+","DYNLL1--AC002563.1",2.0,0.0,1.0,0.0,0.444,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01A","14:SRSF5:69727191:SUSD6:69658513:rev:+","SRSF5--SUSD6",1.0,0.0,1.0,0.0,0.856,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.661,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01A","12:CPSF6:69262562:+:9:C9orf3:95086682:+:fusion","CPSF6--C9orf3",2.0,134.0,130.0,48.0,0.154,false,0.0391459074733]
["TCGA-BLCA","TCGA-BL-A13I-01A","13:TPT1:45336873:-:1:TRAPPC3:36138232:-:fusion","TPT1--TRAPPC3",7.0,0.0,1.0,0.0,0.203,false,0.0355871886121]
["TCGA-BLCA","TCGA-BL-A13I-01A","16:CNOT1:58520695:-:2:PCBP1-AS1:70087343:-:fusion","CNOT1--PCBP1-AS1",2.0,408.0,7.0,0.0,0.639,false,0.00355871886121]
["TCGA-BLCA","TCGA-BL-A13I-01A","1:GLUL:182382894:-:9:SLC24A2:19573469:-:fusion","GLUL--SLC24A2",7.0,0.0,1.0,0.0,0.157,false,0.00591715976331]
["TCGA-BLCA","TCGA-BL-A13I-01A","8:CTSB:11849084:-:2:MYO7B:127636794:+:fusion","CTSB--MYO7B",3.0,16.0,26.0,0.0,0.442,false,0.0]
["TCGA-BLCA","TCGA-BL-A13I-01A","X:MAGED1:51894794:+:19:OAZ1:2271444:+:fusion","MAGED1--OAZ1",2.0,0.0,1.0,0.0,0.501,false,0.0142348754448]
["TCGA-BLCA","TCGA-BL-A13I-01B","10:PRKG1:51153330:SGMS1-AS1:50629031:rev:+","PRKG1--SGMS1-AS1",1.0,0.0,1.0,0.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01B","1:AC118553.2:100050004:SLC35A3:100011365:rev:+","AC118553.2--SLC35A3",1.0,0.0,2.0,0.0,0.843,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01B","21:AF127577.4:15014344:NRIP1:15043574:rev:-","AF127577.4--NRIP1",3.0,94.0,69.0,50.0,0.685,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01B","5:MATR3:139279129:SNHG4:139278327:rev:+","MATR3--SNHG4",2.0,51.0,31.0,26.0,0.925,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13I-01B","9:MEGF9:120713758:FBXW2:120788278:rev:-","MEGF9--FBXW2",1.0,0.0,1.0,0.0,0.958,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","10:AC068896.1:124681607:CTBP2:125039155:rev:-","AC068896.1--CTBP2",1.0,0.0,1.0,0.0,0.836,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","10:ZRANB1:124966781:AL731577.2:124942457:rev:+","ZRANB1--AL731577.2",2.0,12.0,8.0,4.0,0.614,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","11:AP001273.2:93794035:MED17:93790574:rev:+","AP001273.2--MED17",1.0,16.0,8.0,6.0,0.979,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","12:AC025263.2:69801721:RAB3IP:69800209:rev:+","AC025263.2--RAB3IP",7.0,87.0,56.0,45.0,0.932,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","12:GAS2L3:100612141:NR1H4:100532458:rev:+","GAS2L3--NR1H4",1.0,0.0,1.0,0.0,0.85,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","14:PRPF39:45084249:TOGARAM1:45025783:rev:+","PRPF39--TOGARAM1",1.0,0.0,1.0,0.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","15:PARP6:72251207:AC009690.3:72271104:rev:-","PARP6--AC009690.3",1.0,0.0,1.0,0.0,0.928,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","16:AC009119.2:83912367:MLYCD:83906987:rev:+","AC009119.2--MLYCD",7.0,26.0,17.0,13.0,0.457,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","17:AC004596.1:44198934:MIR2117HG:43450897:rev:+","AC004596.1--MIR2117HG",1.0,0.0,1.0,0.0,0.944,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","17:AC005410.2:11977248:ZNF18:11978744:rev:-","AC005410.2--ZNF18",1.0,0.0,3.0,0.0,0.958,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","17:AC046185.1:63751940:CCDC47:63754518:rev:-","AC046185.1--CCDC47",1.0,6.0,8.0,6.0,0.836,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","19:TCF3:1650177:KLF16:1854760:rev:-","TCF3--KLF16",1.0,0.0,1.0,0.0,0.96,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","1:DISP1:222943332:AL392172.1:222823884:rev:+","DISP1--AL392172.1",1.0,1.0,1.0,0.0,0.836,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","20:STX16-NPEPL1:58673711:STX16:58667490:rev:+","STX16-NPEPL1--STX16",1.0,14.0,7.0,6.0,0.949,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","21:IL10RB:33268517:IFNAR2:33241840:rev:+","IL10RB--IFNAR2",1.0,2.0,1.0,0.0,0.928,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","22:AC007731.5:20446443:KLHL22:20471515:rev:-","AC007731.5--KLHL22",6.0,18.0,9.0,9.0,0.925,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","2:LY75-CD302:159872451:LY75:159899059:rev:-","LY75-CD302--LY75",1.0,0.0,2.0,0.0,0.825,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",2.0,0.0,182.0,0.0,0.402,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","5:MATR3:139279129:SNHG4:139278327:rev:+","MATR3--SNHG4",10.0,51.0,31.0,26.0,0.819,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","6:TIAM2:154833409:SCAF8:154773989:rev:+","TIAM2--SCAF8",2.0,30.0,19.0,15.0,0.59,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","8:AC110275.1:43018494:HOOK3:42906173:rev:+","AC110275.1--HOOK3",2.0,25.0,19.0,11.0,0.464,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01A","21:ETS2:38818646:+:8:RPL8:144791959:-:fusion","ETS2--RPL8",2.0,0.0,16.0,0.0,0.47,false,0.0135135135135]
["TCGA-BLCA","TCGA-BL-A13J-01A","22:LARGE1:33604435:-:15:IQCH-AS1:67459975:-:fusion","LARGE1--IQCH-AS1",1.0,0.0,1.0,0.0,0.731,false,0.00847457627119]
["TCGA-BLCA","TCGA-BL-A13J-01A","2:HDAC4:239236593:-:2:SATB2:199456096:-:reg","HDAC4--SATB2",1.0,0.0,1.0,0.0,0.785,false,0.00423728813559]
["TCGA-BLCA","TCGA-BL-A13J-01B","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",4.0,2052.0,512.0,403.0,0.902,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","12:AC025263.2:69801721:RAB3IP:69800209:rev:+","AC025263.2--RAB3IP",2.0,87.0,56.0,45.0,0.871,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","13:LMO7:75727098:AL137782.1:75621763:rev:+","LMO7--AL137782.1",2.0,40.0,23.0,19.0,0.776,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","1:SLC35A3:99999415:AC118553.2:99993537:rev:+","SLC35A3--AC118553.2",2.0,13.0,8.0,6.0,0.905,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","21:AF127577.4:15014344:NRIP1:15043574:rev:-","AF127577.4--NRIP1",10.0,94.0,69.0,50.0,0.725,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","22:PPIL2:21675115:MIR130B:21669913:rev:+","PPIL2--MIR130B",1.0,18.0,12.0,7.0,0.932,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","3:NPHP3-ACAD11:132681914:NPHP3:132692818:rev:-","NPHP3-ACAD11--NPHP3",1.0,7.0,6.0,4.0,0.955,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","3:TSEN2:12503784:PPARG:12392614:rev:+","TSEN2--PPARG",1.0,1.0,2.0,1.0,0.875,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","5:MATR3:139279129:SNHG4:139278327:rev:+","MATR3--SNHG4",2.0,51.0,31.0,26.0,0.663,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","8:LRRC69:91135739:OTUD6B:91071138:rev:+","LRRC69--OTUD6B",3.0,0.0,1.0,0.0,0.849,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-01B","15:ARIH1:72475014:+:13:LINC00598:40082316:-:fusion","ARIH1--LINC00598",4.0,0.0,2.0,0.0,0.242,false,0.0526315789474]
["TCGA-BLCA","TCGA-BL-A13J-01B","1:CAP1:40072271:+:11:TMPRSS4:118107774:+:fusion","CAP1--TMPRSS4",6.0,1.0,121.0,0.0,0.31,false,0.0350877192982]
["TCGA-BLCA","TCGA-BL-A13J-01B","3:ACKR2:42839279:+:3:POMGNT2:43081536:-:strandcross","ACKR2--POMGNT2",3.0,2.0,2.0,1.0,0.183,false,0.0701754385965]
["TCGA-BLCA","TCGA-BL-A13J-11A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.968,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-11A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",2.0,1.0,1034.0,1.0,0.449,false,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.953,true,"NA"]
["TCGA-BLCA","TCGA-BL-A13J-11A","12:PPP1R12A:79775918:-:17:MIR1253:2748182:-:fusion","PPP1R12A--MIR1253",4.0,0.0,2.0,0.0,0.245,false,0.0458015267176]
["TCGA-BLCA","TCGA-BL-A13J-11A","9:TPM2:35685064:-:17:ACTG1:81511626:-:fusion","TPM2--ACTG1",2.0,123.0,93.0,53.0,0.635,false,0.030534351145]
["TCGA-BLCA","TCGA-BL-A3JM-01A","10:SHOC2:110919657:PDCD4:110881233:rev:+","SHOC2--PDCD4",1.0,2.0,6.0,0.0,0.86,false,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","14:SLC38A6:61078927:PCNX4:60115719:rev:+","SLC38A6--PCNX4",2.0,0.0,1.0,0.0,0.518,false,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.895,true,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,495.0,0.0,0.419,false,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.83189997653301,true,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.593,false,"NA"]
["TCGA-BLCA","TCGA-BL-A3JM-01A","10:TCTN3:95683522:-:17:COASY:42562167:+:fusion","TCTN3--COASY",2.0,0.0,1.0,0.0,0.329,false,0.0257826887661]
["TCGA-BLCA","TCGA-BL-A3JM-01A","19:ZNF788:12135927:+:19:DNASE2:12881152:-:strandcross","ZNF788--DNASE2",1.0,0.0,1.0,0.0,0.802,false,0.0036832412523]
["TCGA-BLCA","TCGA-BL-A3JM-01A","1:ANGPTL1:178864954:-:18:AC090227.1:49802853:-:fusion","ANGPTL1--AC090227.1",1.0,0.0,1.0,0.0,0.778,false,0.00552486187845]
["TCGA-BLCA","TCGA-BL-A3JM-01A","1:HNRNPU:244855904:-:19:EEF2:3977610:-:fusion","HNRNPU--EEF2",2.0,0.0,1.0,0.0,0.369,false,0.02394106814]
["TCGA-BLCA","TCGA-BL-A3JM-01A","1:SNHG3:28508160:+:14:ABHD12B:50901829:+:fusion","SNHG3--ABHD12B",2.0,13.0,4.0,2.0,0.638,false,0.00920810313076]
["TCGA-BLCA","TCGA-BL-A3JM-01A","5:LARP1:154756193:+:18:AC090227.1:49802853:-:fusion","LARP1--AC090227.1",1.0,0.0,1.0,0.0,0.711,false,0.00552486187845]
["TCGA-BLCA","TCGA-BL-A3JM-01A","5:RACK1:181243692:-:20:ZFAS1:49280903:+:fusion","RACK1--ZFAS1",1.0,0.0,1.0,0.0,0.87,false,0.00184162062615]
["TCGA-BLCA","TCGA-BL-A3JM-01A","9:RPS6:19378368:-:1:ARF1:228097852:+:fusion","RPS6--ARF1",4.0,0.0,1.0,0.0,0.194,false,0.0386740331492]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.873,true,"NA"]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","8:GTF2E2:30635032:GSR:30712088:rev:-","GTF2E2--GSR",2.0,0.0,1.0,0.0,0.619,false,"NA"]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",4.0,35.0,139.0,0.0,0.489,false,"NA"]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.457,false,"NA"]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","11:ESAM:124754245:-:7:LRWD1:102472218:+:fusion","ESAM--LRWD1",2.0,0.0,1.0,0.0,0.393,false,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","11:ILK:6609408:+:10:VIM:17237230:+:fusion","ILK--VIM",2.0,0.0,1.0,0.0,0.323,false,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","11:MCAM:119311090:-:16:MYH11:15715272:-:fusion","MCAM--MYH11",3.0,0.0,23.0,0.0,0.29,false,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","17:ACTG1:81511238:-:17:MPDU1:7583821:+:strandcross","ACTG1--MPDU1",2.0,0.0,3.0,0.0,0.397,false,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","17:COL1A1:50186317:-:1:ATPIF1:28236361:+:fusion","COL1A1--ATPIF1",2.0,0.0,16.0,0.0,0.272,false,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","19:AC008894.1:16104101:-:15:CIB1:90232327:-:fusion","AC008894.1--CIB1",2.0,429.0,2.0,1.0,0.917,true,0.00621118012422]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","7:COL1A2:94425857:+:17:COL1A1:50192850:-:fusion","COL1A2--COL1A1",4.0,2410.0,81.0,72.0,0.273,true,0.0217391304348]
["TCGA-BLCA","TCGA-BL-A5ZZ-01A","9:TPM2:35685064:-:17:ACTG1:81511626:-:fusion","TPM2--ACTG1",1.0,123.0,93.0,53.0,0.79,false,0.00931677018634]
["TCGA-BLCA","TCGA-BT-A0S7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.495,true,"NA"]
["TCGA-BLCA","TCGA-BT-A0S7-01A","12:CPSF6:69262562:+:12:AC021054.1:643959:+:rev","CPSF6--AC021054.1",2.0,11.0,5.0,1.0,0.85,true,0.0175438596491]
["TCGA-BLCA","TCGA-BT-A0S7-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",3.0,0.0,260.0,0.0,0.317,false,0.0]
["TCGA-BLCA","TCGA-BT-A0YX-01A","19:PRKCSH:11438124:QTRT1:10712161:rev:+","PRKCSH--QTRT1",1.0,0.0,1.0,0.0,0.949,false,"NA"]
["TCGA-BLCA","TCGA-BT-A0YX-01A","1:ILF2:153665220:ADAR:154585865:rev:-","ILF2--ADAR",1.0,0.0,1.0,0.0,0.949,false,"NA"]
["TCGA-BLCA","TCGA-BT-A0YX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.905,true,"NA"]
["TCGA-BLCA","TCGA-BT-A0YX-01A","2:YWHAQ:9630159:NOL10:10577738:rev:-","YWHAQ--NOL10",1.0,0.0,1.0,0.0,0.845,false,"NA"]
["TCGA-BLCA","TCGA-BT-A0YX-01A","9:IARS:92293441:NOL8:92310675:rev:-","IARS--NOL8",1.0,0.0,1.0,0.0,0.98,false,"NA"]
["TCGA-BLCA","TCGA-BT-A0YX-01A","11:AC018523.2:14517880:-:17:RNF167:4940128:+:fusion","AC018523.2--RNF167",3.0,0.0,1.0,0.0,0.377,false,0.0262008733624]
["TCGA-BLCA","TCGA-BT-A0YX-01A","12:KRT5:52517107:-:6:HLA-C:31269525:-:fusion","KRT5--HLA-C",1.0,0.0,1.0,0.0,0.624,false,0.0174672489083]
["TCGA-BLCA","TCGA-BT-A0YX-01A","17:KRT13:41505447:-:19:RPS11:49497917:+:fusion","KRT13--RPS11",1.0,0.0,2.0,0.0,0.929,false,0.00873362445415]
["TCGA-BLCA","TCGA-BT-A0YX-01A","19:ACTN4:38729447:+:1:S100A8:153390557:-:fusion","ACTN4--S100A8",2.0,0.0,2.0,0.0,0.266,false,0.0349344978166]
["TCGA-BLCA","TCGA-BT-A0YX-01A","1:LRP8:53246553:-:6:SYCP2L:10974768:+:fusion","LRP8--SYCP2L",2.0,0.0,30.0,0.0,0.44,false,0.0218340611354]
["TCGA-BLCA","TCGA-BT-A0YX-01A","2:TRIP12:229921880:-:2:SP100:230461262:+:strandcross","TRIP12--SP100",1.0,1.0,1.0,0.0,0.64,false,0.0174672489083]
["TCGA-BLCA","TCGA-BT-A0YX-01A","7:HSPB1:76303076:+:19:FXYD3:35122765:+:fusion","HSPB1--FXYD3",1.0,0.0,1.0,0.0,0.755,false,0.00873362445415]
["TCGA-BLCA","TCGA-BT-A20J-01A","12:CPNE8:38829379:KIF21A:39294517:rev:-","CPNE8--KIF21A",1.0,0.0,1.0,0.0,0.969,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20J-01A","16:AC120114.1:29927931:MVP:29835704:rev:+","AC120114.1--MVP",1.0,0.0,1.0,0.0,0.929,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20J-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.727,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20J-01A","5:ARHGAP26:142932125:NDFIP1:142131808:rev:+","ARHGAP26--NDFIP1",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20J-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",3.0,0.0,205.0,0.0,0.399,false,0.00869565217391]
["TCGA-BLCA","TCGA-BT-A20J-01A","20:LAMA5:62314555:-:12:DDX51:132141020:-:fusion","LAMA5--DDX51",4.0,0.0,1.0,0.0,0.161,false,0.0566037735849]
["TCGA-BLCA","TCGA-BT-A20N-01A","1:EPS15:51519199:NRDC:51840514:rev:-","EPS15--NRDC",1.0,3.0,7.0,2.0,0.838,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20N-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.483,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20N-01A","3:TSEN2:12492217:PPARG:12416704:rev:+","TSEN2--PPARG",2.0,0.0,1.0,0.0,0.454,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20N-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",12.0,1558.0,165.0,160.0,0.368,true,0.0189873417722]
["TCGA-BLCA","TCGA-BT-A20N-11A","11:TEAD1:12764434:PARVA:12473745:rev:+","TEAD1--PARVA",2.0,7.0,6.0,2.0,0.606,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20N-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.847,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20N-11A","3:AC137630.2:48983727:-:11:TAGLN:117203002:+:fusion","AC137630.2--TAGLN",2.0,0.0,3.0,0.0,0.476,false,0.0350877192982]
["TCGA-BLCA","TCGA-BT-A20N-11A","9:TPM2:35685064:-:17:ACTG1:81511626:-:fusion","TPM2--ACTG1",1.0,123.0,93.0,53.0,0.951,false,0.00877192982456]
["TCGA-BLCA","TCGA-BT-A20O-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",3.0,4613.0,511.0,496.0,0.427,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20O-01A","1:EPS15:51468473:NRDC:51809401:rev:-","EPS15--NRDC",1.0,0.0,1.0,0.0,0.974,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20O-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.978,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20O-01A","3:FBXL2:33297962:CRTAP:33120344:rev:+","FBXL2--CRTAP",1.0,0.0,1.0,0.0,0.837,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20O-01A","11:CFL1:65855418:-:17:GPS1:82055165:+:fusion","CFL1--GPS1",2.0,0.0,2.0,0.0,0.176,false,0.0825688073394]
["TCGA-BLCA","TCGA-BT-A20O-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.48,true,0.0152905198777]
["TCGA-BLCA","TCGA-BT-A20O-01A","2:FN1:215379130:-:16:FUS:31185080:+:fusion","FN1--FUS",2.0,0.0,2.0,0.0,0.315,false,0.0214067278287]
["TCGA-BLCA","TCGA-BT-A20P-01A","10:MTG1:133402773:PWWP2B:132417061:rev:+","MTG1--PWWP2B",1.0,1.0,5.0,1.0,0.854,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20P-01A","14:RBM23:22909483:PSMB5:23033674:rev:-","RBM23--PSMB5",1.0,2.0,4.0,1.0,0.937,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20P-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",2.0,5352.0,117.0,117.0,0.468,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20P-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.69,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20P-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",5.0,0.0,297.0,0.0,0.299,false,0.0289855072464]
["TCGA-BLCA","TCGA-BT-A20P-01A","17:LUC7L3:50751004:+:19:AC008738.3:33299934:+:fusion","LUC7L3--AC008738.3",2.0,3005.0,2.0,2.0,0.399,true,0.0217391304348]
["TCGA-BLCA","TCGA-BT-A20Q-01A","11:NDUFV1:67610441:RPS6KB2:67428498:rev:+","NDUFV1--RPS6KB2",2.0,0.0,1.0,0.0,0.471,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-01A","13:RB1:48381443:ITM2B:48253808:rev:+","RB1--ITM2B",1.0,28.0,53.0,14.0,0.872,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-01A","7:ACTB:5540676:PMS2:5999275:rev:-","ACTB--PMS2",1.0,131.0,41.0,14.0,0.852,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.521,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-01A","11:MARK2:63909596:+:20:BPIFA2:33168154:+:fusion","MARK2--BPIFA2",3.0,0.0,18.0,0.0,0.188,false,0.013986013986]
["TCGA-BLCA","TCGA-BT-A20Q-01A","21:CSTB:43774658:-:17:KRT17:41619688:-:fusion","CSTB--KRT17",1.0,0.0,1.0,0.0,0.917,false,0.00341296928328]
["TCGA-BLCA","TCGA-BT-A20Q-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.819,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-11A","8:CPQ:96880005:SDC2:96593480:rev:+","CPQ--SDC2",1.0,22.0,54.0,11.0,0.825,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20Q-11A","3:RPL29:51994297:-:1:S100A6:153534830:-:fusion","RPL29--S100A6",16.0,0.0,25.0,0.0,0.536359912420072,false,0.0294117647059]
["TCGA-BLCA","TCGA-BT-A20Q-11A","7:ACTB:5528470:-:11:AHNAK:62534074:-:fusion","ACTB--AHNAK",3.0,0.0,175.0,0.0,0.201,false,0.0588235294118]
["TCGA-BLCA","TCGA-BT-A20R-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",3.0,0.0,267.0,0.0,0.515,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.614,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.447,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-01A","2:TMSB10:84906117:+:16:TSNAXIP1:67827753:+:fusion","TMSB10--TSNAXIP1",3.0,0.0,9.0,0.0,0.237,false,0.019512195122]
["TCGA-BLCA","TCGA-BT-A20R-11A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,1126.0,0.0,0.442,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.652,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-11A","X:LINC01278:63560832:ARHGEF9:63706449:rev:-","LINC01278--ARHGEF9",1.0,0.0,3.0,0.0,0.823,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20R-11A","11:MCAM:119311090:-:16:MYH11:15715272:-:fusion","MCAM--MYH11",2.0,0.0,23.0,0.0,0.291,false,0.0197368421053]
["TCGA-BLCA","TCGA-BT-A20R-11A","12:TXNRD1:104287109:+:12:UBC:124913774:-:strandcross","TXNRD1--UBC",1.0,1.0,1.0,0.0,0.709,false,0.00657894736842]
["TCGA-BLCA","TCGA-BT-A20R-11A","16:MYH11:15721422:-:7:FLNC:128858008:+:fusion","MYH11--FLNC",3.0,0.0,1.0,0.0,0.205,false,0.0241228070175]
["TCGA-BLCA","TCGA-BT-A20R-11A","16:MYH11:15741463:-:19:LIN37:35752913:+:fusion","MYH11--LIN37",2.0,0.0,1.0,0.0,0.226,false,0.0219298245614]
["TCGA-BLCA","TCGA-BT-A20R-11A","16:NDE1:15724291:+:12:EP400:132077401:+:fusion","NDE1--EP400",2.0,0.0,1.0,0.0,0.186,false,0.0285087719298]
["TCGA-BLCA","TCGA-BT-A20R-11A","17:CSF3:40017758:+:17:EIF1:41688935:+:reg","CSF3--EIF1",3.0,0.0,1.0,0.0,0.193,false,0.0263157894737]
["TCGA-BLCA","TCGA-BT-A20R-11A","19:CNN1:11549724:+:17:PFN1:4949014:-:fusion","CNN1--PFN1",2.0,0.0,1.0,0.0,0.191,false,0.0263157894737]
["TCGA-BLCA","TCGA-BT-A20R-11A","21:COL6A2:46124713:+:14:LRP10:22877984:+:fusion","COL6A2--LRP10",3.0,11.0,3.0,0.0,0.178,false,0.030701754386]
["TCGA-BLCA","TCGA-BT-A20R-11A","9:TPM2:35685064:-:17:ACTG1:81511626:-:fusion","TPM2--ACTG1",6.0,123.0,93.0,53.0,0.178,true,0.030701754386]
["TCGA-BLCA","TCGA-BT-A20R-11A","X:FLNA:154348784:-:8:EEF1D:143580740:-:fusion","FLNA--EEF1D",2.0,0.0,1.0,0.0,0.167,false,0.0328947368421]
["TCGA-BLCA","TCGA-BT-A20R-11A","X:FLNA:154367397:-:11:NDUFV1:67610995:+:fusion","FLNA--NDUFV1",1.0,0.0,1.0,0.0,0.965,false,0.00219298245614]
["TCGA-BLCA","TCGA-BT-A20T-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.441,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","17:RNF213:80351803:CCDC40:80048583:rev:+","RNF213--CCDC40",1.0,1.0,1.0,0.0,0.954,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","1:CCNL2:1390230:MRPL20:1402256:rev:-","CCNL2--MRPL20",1.0,1.0,1.0,0.0,0.823,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.873,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",2.0,5352.0,117.0,117.0,0.467,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","8:TNFRSF10D:23148438:TNFRSF10A:23201919:rev:-","TNFRSF10D--TNFRSF10A",2.0,1.0,73.0,0.0,0.415,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20T-01A","14:DHRS2:23636772:+:1:GSTM4:109671287:+:fusion","DHRS2--GSTM4",1.0,44.0,40.0,34.0,0.788,false,0.0108108108108]
["TCGA-BLCA","TCGA-BT-A20T-01A","17:KRT19:41523617:-:1:S100A4:153545097:-:fusion","KRT19--S100A4",2.0,0.0,4.0,0.0,0.177,false,0.0378378378378]
["TCGA-BLCA","TCGA-BT-A20T-01A","1:EPHA10:37714854:-:12:KRT7:52238705:+:fusion","EPHA10--KRT7",4.0,0.0,7.0,0.0,0.195,false,0.0380952380952]
["TCGA-BLCA","TCGA-BT-A20T-01A","1:NUCKS1:205720501:-:11:ASRGL1:62357053:+:fusion","NUCKS1--ASRGL1",3.0,0.0,3.0,0.0,0.162,false,0.0380952380952]
["TCGA-BLCA","TCGA-BT-A20T-01A","5:NSD1:177248324:+:5:FAT2:151512606:-:strandcross","NSD1--FAT2",2.0,0.0,1.0,0.0,0.361,false,0.027027027027]
["TCGA-BLCA","TCGA-BT-A20U-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.665,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.933,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-01A","2:GMPPA:219502441:LINC00608:218979265:rev:+","GMPPA--LINC00608",2.0,103.0,7.0,6.0,0.675,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-01A","2:LINC01907:230700323:NCL:231460866:rev:-","LINC01907--NCL",1.0,200.0,63.0,17.0,0.898,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.417,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-11A","19:LYPD3:43465493:PHLDB3:43486870:rev:-","LYPD3--PHLDB3",1.0,0.0,2.0,0.0,0.861,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.606,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-11A","4:AC139887.2:781772:CTBP1:1241519:rev:-","AC139887.2--CTBP1",1.0,4.0,18.0,2.0,0.823,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-11A","X:FTX:74274342:ABCB7:75114834:rev:-","FTX--ABCB7",1.0,0.0,1.0,0.0,0.805,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20U-11A","12:SUOX:56006641:+:8:AP003352.1:98041726:+:fusion","SUOX--AP003352.1",4.0,10515.0,2.0,2.0,0.644,true,0.00735294117647]
["TCGA-BLCA","TCGA-BT-A20V-01A","14:PELI2:56178464:KTN1:55612019:rev:+","PELI2--KTN1",1.0,1.0,3.0,0.0,0.906,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20V-01A","1:ZZZ3:77683262:USP33:77741748:rev:-","ZZZ3--USP33",1.0,0.0,3.0,0.0,0.953,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20V-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",16.0,9462.0,7336.0,7317.0,0.8455054702023,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20V-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.556,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20V-01A","11:APLP2:130143806:+:5:PHYKPL:178230940:-:fusion","APLP2--PHYKPL",4.0,0.0,1.0,0.0,0.175,false,0.0674157303371]
["TCGA-BLCA","TCGA-BT-A20V-01A","11:EHD1:64874421:-:11:GLYAT:58640676:-:reg","EHD1--GLYAT",2.0,0.0,1.0,0.0,0.867,false,0.00561797752809]
["TCGA-BLCA","TCGA-BT-A20V-01A","17:PRPF8:1651663:-:19:CYP2S1:41205958:+:fusion","PRPF8--CYP2S1",2.0,0.0,1.0,0.0,0.205,false,0.0505617977528]
["TCGA-BLCA","TCGA-BT-A20V-01A","1:GNG5:84498325:-:17:P3H4:41807490:-:fusion","GNG5--P3H4",2.0,0.0,1.0,0.0,0.152,false,0.0674157303371]
["TCGA-BLCA","TCGA-BT-A20V-01A","7:ACTB:5528470:-:11:AHNAK:62534074:-:fusion","ACTB--AHNAK",2.0,0.0,175.0,0.0,0.179,false,0.0674157303371]
["TCGA-BLCA","TCGA-BT-A20V-01A","7:HNRNPA2B1:26200572:-:15:RPL4:66502871:-:fusion","HNRNPA2B1--RPL4",1.0,0.0,1.0,0.0,0.828,false,0.00561797752809]
["TCGA-BLCA","TCGA-BT-A20W-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.827,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20W-01A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",4.0,0.0,91.0,0.0,0.184,false,0.0204081632653]
["TCGA-BLCA","TCGA-BT-A20W-01A","11:MCAM:119311090:-:7:HNRNPA2B1:26197732:-:fusion","MCAM--HNRNPA2B1",2.0,0.0,37.0,0.0,0.385,false,0.041095890411]
["TCGA-BLCA","TCGA-BT-A20W-01A","12:CLEC4A:8090299:+:8:ANK1:41672426:-:fusion","CLEC4A--ANK1",1.0,0.0,1.0,0.0,0.793,false,0.0]
["TCGA-BLCA","TCGA-BT-A20W-01A","17:ABR:1067077:-:17:AC129507.4:322262:+:strandcross","ABR--AC129507.4",3.0,0.0,1.0,0.0,0.706,false,0.0]
["TCGA-BLCA","TCGA-BT-A20W-01A","1:S100A6:153535202:-:7:SLC4A2:151074675:+:fusion","S100A6--SLC4A2",2.0,0.0,1.0,0.0,0.23,false,0.0547945205479]
["TCGA-BLCA","TCGA-BT-A20W-01A","21:DOPEY2:36253909:+:1:RAB25:156069671:+:fusion","DOPEY2--RAB25",2.0,1.0,2.0,1.0,0.558,false,0.0205479452055]
["TCGA-BLCA","TCGA-BT-A20W-01A","5:VDAC1:133975871:-:7:LINC00972:85449860:+:fusion","VDAC1--LINC00972",3.0,0.0,1.0,0.0,0.207,false,0.0547945205479]
["TCGA-BLCA","TCGA-BT-A20W-01A","6:CD164:109366518:-:10:ATP5C1:7802243:+:fusion","CD164--ATP5C1",5.0,0.0,1.0,0.0,0.161,false,0.0616438356164]
["TCGA-BLCA","TCGA-BT-A20W-01A","8:SLC20A2:42444646:-:11:TSPAN18:44860328:+:fusion","SLC20A2--TSPAN18",1.0,0.0,1.0,0.0,0.884,false,0.0]
["TCGA-BLCA","TCGA-BT-A20W-11A","15:USP8:50441493:SLC27A2:50225988:rev:+","USP8--SLC27A2",2.0,0.0,1.0,0.0,0.719,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20W-11A","19:ZNF738:21375964:ZNF430:21056631:rev:+","ZNF738--ZNF430",1.0,3551.0,102.0,73.0,0.821,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20W-11A","8:RUNX1T1:92102857:TRIQK:92954564:rev:-","RUNX1T1--TRIQK",1.0,0.0,4.0,0.0,0.875,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20W-11A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",4.0,0.0,91.0,0.0,0.305,false,0.0222222222222]
["TCGA-BLCA","TCGA-BT-A20W-11A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",5.0,0.0,297.0,0.0,0.278,false,0.0350877192982]
["TCGA-BLCA","TCGA-BT-A20W-11A","19:RPL28:55388048:+:2:ORMDL1:189784318:-:fusion","RPL28--ORMDL1",5.0,0.0,3.0,0.0,0.203,false,0.0350877192982]
["TCGA-BLCA","TCGA-BT-A20W-11A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",1.0,2010.0,1976.0,1665.0,0.831,false,0.0116959064327]
["TCGA-BLCA","TCGA-BT-A20W-11A","8:GRHL2:101492849:+:8:ANXA13:123684722:-:strandcross","GRHL2--ANXA13",1.0,0.0,1.0,0.0,0.952,false,0.00584795321637]
["TCGA-BLCA","TCGA-BT-A20X-01A","12:RNF41:56213958:ANKRD52:56245596:rev:-","RNF41--ANKRD52",1.0,0.0,1.0,0.0,0.979,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","17:PGS1:78404089:AC061992.1:78362673:rev:+","PGS1--AC061992.1",1.0,0.0,1.0,0.0,0.941,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.86,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,1126.0,0.0,0.448,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.998,true,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","3:C3orf52:112093489:PHLDB2:111962108:rev:+","C3orf52--PHLDB2",1.0,1.0,1.0,0.0,0.806,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.742,false,"NA"]
["TCGA-BLCA","TCGA-BT-A20X-01A","11:CFL1:65854832:-:7:COL1A2:94430247:+:fusion","CFL1--COL1A2",2.0,390.0,14.0,1.0,0.428,false,0.00529100529101]
["TCGA-BLCA","TCGA-BT-A20X-01A","12:KRT5:52514996:-:7:SEM1:96709861:-:fusion","KRT5--SEM1",2.0,0.0,6.0,0.0,0.228,false,0.0132275132275]
["TCGA-BLCA","TCGA-BT-A20X-01A","12:KRT5:52517107:-:3:ACY1:51986210:+:fusion","KRT5--ACY1",3.0,0.0,6.0,0.0,0.312,false,0.00793650793651]
["TCGA-BLCA","TCGA-BT-A20X-01A","12:PTHLH:27970025:-:17:ALDOC:28575914:-:fusion","PTHLH--ALDOC",2.0,0.0,1.0,0.0,0.289,false,0.00793650793651]
["TCGA-BLCA","TCGA-BT-A20X-01A","17:JUP:41755730:-:8:MIR6850:144791991:-:fusion","JUP--MIR6850",2.0,0.0,1.0,0.0,0.267,false,0.00925925925926]
["TCGA-BLCA","TCGA-BT-A20X-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.461,false,0.00396825396825]
["TCGA-BLCA","TCGA-BT-A20X-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",4.0,2324.0,521.0,517.0,0.166,true,0.0362903225806]
["TCGA-BLCA","TCGA-BT-A20X-01A","8:NDRG1:133238538:-:5:SYNPO:150656404:+:fusion","NDRG1--SYNPO",2.0,0.0,1.0,0.0,0.241,false,0.0132275132275]
["TCGA-BLCA","TCGA-BT-A2LA-01A","14:RBM23:22906195:PSMB5:23033674:rev:-","RBM23--PSMB5",1.0,1.0,2.0,0.0,0.926,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","16:RNF40:30766558:KIF22:29805263:rev:+","RNF40--KIF22",1.0,0.0,1.0,0.0,0.893,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","19:NUCB1:48913564:SPHK2:48627692:rev:+","NUCB1--SPHK2",1.0,0.0,1.0,0.0,0.931,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",29.0,9462.0,7336.0,7317.0,0.90846714510602,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.411,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","7:SMURF1:99143726:ATP5J2:99460193:rev:-","SMURF1--ATP5J2",2.0,6.0,7.0,2.0,0.51,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.468,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.249,false,0.00418410041841]
["TCGA-BLCA","TCGA-BT-A2LA-01A","12:RPLP0:120198704:-:11:GSTP1:67585138:+:fusion","RPLP0--GSTP1",1.0,0.0,1.0,0.0,0.79,false,0.00560224089636]
["TCGA-BLCA","TCGA-BT-A2LA-01A","13:AKAP11:42313940:+:13:LINC02333:52340893:+:reg","AKAP11--LINC02333",1.0,1.0,2.0,1.0,0.745,false,0.00560224089636]
["TCGA-BLCA","TCGA-BT-A2LA-01A","17:LINC00511:72603103:-:12:ANO6:45388161:+:fusion","LINC00511--ANO6",1.0,0.0,1.0,0.0,0.732,false,0.00560224089636]
["TCGA-BLCA","TCGA-BT-A2LA-01A","19:FBL:39836556:-:1:CCDC27:3747814:+:fusion","FBL--CCDC27",2.0,8.0,1.0,1.0,0.576,true,0.0112044817927]
["TCGA-BLCA","TCGA-BT-A2LA-01A","20:EDEM2:35134738:-:20:BCAS4:50818211:+:strandcross","EDEM2--BCAS4",1.0,0.0,1.0,0.0,0.803,false,0.00560224089636]
["TCGA-BLCA","TCGA-BT-A2LA-01A","5:DMGDH:79235811:-:12:ETV6:11839140:+:fusion","DMGDH--ETV6",1.0,0.0,1.0,0.0,0.677,false,0.0112044817927]
["TCGA-BLCA","TCGA-BT-A2LA-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.58,true,0.0112044817927]
["TCGA-BLCA","TCGA-BT-A2LA-01A","6:VPS52:33263484:-:22:L3MBTL2:41206007:+:fusion","VPS52--L3MBTL2",3.0,5021.0,3.0,3.0,0.925,true,0.0]
["TCGA-BLCA","TCGA-BT-A2LA-01A","7:GATS:100222597:-:7:PILRB:100355143:+:strandcross","GATS--PILRB",2.0,53.0,58.0,20.0,0.625,true,0.0112044817927]
["TCGA-BLCA","TCGA-BT-A2LA-01A","X:MAGEC3:141896507:+:X:MAGEC2:142204053:-:strandcross","MAGEC3--MAGEC2",5.0,230.0,53.0,48.0,0.395,true,0.0196078431373]
["TCGA-BLCA","TCGA-BT-A2LA-11A","10:ZEB1-AS1:31309893:ARHGAP12:31861658:rev:-","ZEB1-AS1--ARHGAP12",2.0,170.0,4.0,4.0,0.622,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-11A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.519,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.946,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-11A","9:VAV2:133939103:BRD3:134053590:rev:-","VAV2--BRD3",1.0,1.0,2.0,0.0,0.807,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LA-11A","17:KRT19:41524143:-:11:RPS3:75399670:+:fusion","KRT19--RPS3",5.0,0.0,1.0,0.0,0.156,false,0.0352112676056]
["TCGA-BLCA","TCGA-BT-A2LA-11A","1:RHOC:112701275:-:16:CLN3:28487541:-:fusion","RHOC--CLN3",3.0,0.0,1.0,0.0,0.38,false,0.0176056338028]
["TCGA-BLCA","TCGA-BT-A2LA-11A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.917,true,0.00352112676056]
["TCGA-BLCA","TCGA-BT-A2LA-11A","9:AQP3:33442301:-:11:ANKRD42:83194398:+:fusion","AQP3--ANKRD42",2.0,0.0,1.0,0.0,0.184,false,0.0352112676056]
["TCGA-BLCA","TCGA-BT-A2LB-01A","13:WDFY2:51584824:INTS6-AS1:51512189:rev:+","WDFY2--INTS6-AS1",2.0,65.0,50.0,10.0,0.999,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","15:MAP2K1:66444707:RAB11A:65887701:rev:+","MAP2K1--RAB11A",1.0,1.0,1.0,0.0,0.919,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","1:MDM4:204526434:SNRPE:203869877:rev:+","MDM4--SNRPE",1.0,0.0,1.0,0.0,0.829,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","20:UBOX5:3121384:DDRGK1:3191821:rev:-","UBOX5--DDRGK1",1.0,0.0,1.0,0.0,0.919,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","22:XRCC6:41628230:RBX1:40953555:rev:+","XRCC6--RBX1",1.0,0.0,1.0,0.0,0.902,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",18.0,9462.0,7336.0,7317.0,0.878697865879866,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","7:AC006978.2:30366295:ZNRF2:30323642:rev:+","AC006978.2--ZNRF2",1.0,7.0,10.0,3.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","9:UBAP1:34179240:UBE2R2:33886881:rev:+","UBAP1--UBE2R2",1.0,10.0,10.0,4.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.534,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.502,true,0.0106666666667]
["TCGA-BLCA","TCGA-BT-A2LB-11A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.47,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","11:CD59:33709906:FBXO3:33742084:rev:-","CD59--FBXO3",3.0,0.0,1.0,0.0,0.554,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","15:RHCG:89471407:PEX11A:89677932:rev:-","RHCG--PEX11A",9.0,1015.0,22.0,22.0,0.808,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.503,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","16:NFAT5:69568548:CYB5B:69447150:rev:+","NFAT5--CYB5B",1.0,5.0,3.0,0.0,0.831,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",2.0,4613.0,511.0,496.0,0.461,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",3.0,0.0,1126.0,0.0,0.484,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.449,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","3:AC083798.2:122416250:EAF2:121844453:rev:+","AC083798.2--EAF2",1.0,0.0,1.0,0.0,0.917,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LB-11A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.229,false,0.0172413793103]
["TCGA-BLCA","TCGA-BT-A2LB-11A","12:KRT4:52808294:-:17:P4HB:81845230:-:fusion","KRT4--P4HB",1.0,0.0,1.0,0.0,0.778,false,0.0059880239521]
["TCGA-BLCA","TCGA-BT-A2LB-11A","14:DYNC1H1:102044045:+:11:TCIRG1:68043323:+:fusion","DYNC1H1--TCIRG1",2.0,0.0,1.0,0.0,0.471,false,0.0179640718563]
["TCGA-BLCA","TCGA-BT-A2LB-11A","17:AC019349.1:41501316:+:1:PTPRF:43621935:+:fusion","AC019349.1--PTPRF",1.0,0.0,1.0,0.0,0.736,false,0.00898203592814]
["TCGA-BLCA","TCGA-BT-A2LB-11A","17:AC019349.1:41502409:+:19:RPS15:1438400:+:fusion","AC019349.1--RPS15",3.0,0.0,1.0,0.0,0.16,false,0.0389221556886]
["TCGA-BLCA","TCGA-BT-A2LB-11A","17:KRT13:41505447:-:3:PLXNB1:48413169:-:fusion","KRT13--PLXNB1",1.0,0.0,2.0,0.0,0.945,false,0.00299401197605]
["TCGA-BLCA","TCGA-BT-A2LB-11A","19:SBSN:35527907:-:14:C14orf80:105490183:+:fusion","SBSN--C14orf80",4.0,0.0,1.0,0.0,0.206,false,0.0239520958084]
["TCGA-BLCA","TCGA-BT-A2LB-11A","1:AL031727.2:19596710:-:12:KRT4:52814116:-:fusion","AL031727.2--KRT4",3.0,0.0,1.0,0.0,0.336,false,0.0209580838323]
["TCGA-BLCA","TCGA-BT-A2LB-11A","1:CCNL2:1388950:-:21:CSTB:43774759:-:fusion","CCNL2--CSTB",3.0,44.0,1.0,1.0,0.325,true,0.0209580838323]
["TCGA-BLCA","TCGA-BT-A2LB-11A","4:HNRNPD:82356796:-:17:KRT13:41501362:-:fusion","HNRNPD--KRT13",2.0,0.0,1.0,0.0,0.338,false,0.0209580838323]
["TCGA-BLCA","TCGA-BT-A2LB-11A","4:SORBS2:185587306:-:1:MKNK1:46565136:-:fusion","SORBS2--MKNK1",2.0,0.0,73.0,0.0,0.545,false,0.0119760479042]
["TCGA-BLCA","TCGA-BT-A2LD-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.486,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","15:GOLGA8A:34428615:GOLGA8B:34566473:rev:-","GOLGA8A--GOLGA8B",2.0,284.0,5.0,2.0,0.842,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","16:CNOT1:58520684:AC012183.1:58706297:rev:-","CNOT1--AC012183.1",3.0,839.0,41.0,39.0,0.423,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","17:YWHAE:1400047:PITPNA:1521645:rev:-","YWHAE--PITPNA",1.0,4.0,6.0,3.0,0.906,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",5.0,6005.0,679.0,674.0,0.561,true,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","20:GNAS:58903791:NPEPL1:58701016:rev:+","GNAS--NPEPL1",4.0,0.0,1.0,0.0,0.478,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,29.0,70.0,0.0,0.413,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","9:GSN:121248323:CNTRL:121161856:rev:+","GSN--CNTRL",2.0,342.0,18.0,6.0,0.503,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.525,false,"NA"]
["TCGA-BLCA","TCGA-BT-A2LD-01A","11:ADM:10307397:+:2:FN1:215372300:-:fusion","ADM--FN1",2.0,0.0,2.0,0.0,0.338,false,0.024154589372]
["TCGA-BLCA","TCGA-BT-A2LD-01A","12:EPS8:15789161:-:12:DERA:15956936:+:strandcross","EPS8--DERA",4.0,4.0,2.0,1.0,0.225,false,0.00892857142857]
["TCGA-BLCA","TCGA-BT-A2LD-01A","19:RHPN2:33026504:-:10:DNAJC1:21929141:-:fusion","RHPN2--DNAJC1",3.0,0.0,1.0,0.0,0.792,false,0.0144927536232]
["TCGA-BLCA","TCGA-BT-A2LD-01A","2:FN1:215379130:-:11:NEAT1:65423627:+:fusion","FN1--NEAT1",2.0,0.0,2.0,0.0,0.264,false,0.0289855072464]
["TCGA-BLCA","TCGA-BT-A2LD-01A","2:TMSB10:84906117:+:9:EDF1:136866266:-:fusion","TMSB10--EDF1",3.0,0.0,4.0,0.0,0.171,false,0.0338164251208]
["TCGA-BLCA","TCGA-BT-A2LD-01A","3:SUMF1:4068569:-:3:LRRFIP2:37171066:-:rev","SUMF1--LRRFIP2",4.0,0.0,1.0,0.0,0.801,false,0.0]
["TCGA-BLCA","TCGA-BT-A2LD-01A","6:CDKAL1:21000372:+:1:ASH1L:155370650:-:fusion","CDKAL1--ASH1L",6.0,0.0,1.0,0.0,0.311,false,0.0]
["TCGA-BLCA","TCGA-BT-A3PH-01A","12:ULK1:131895824:SFSWAP:131799037:rev:+","ULK1--SFSWAP",2.0,0.0,1.0,0.0,0.425,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",8.0,4613.0,511.0,496.0,0.534,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","20:ITCH:34393881:CHMP4B:33848467:rev:+","ITCH--CHMP4B",1.0,0.0,1.0,0.0,0.917,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.588,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","5:LHFPL2:78632264:DMGDH:79055904:rev:-","LHFPL2--DMGDH",1.0,0.0,1.0,0.0,0.824,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","9:C9orf3:95005616:MFSD14B:94438401:rev:+","C9orf3--MFSD14B",1.0,1.0,1.0,0.0,0.891,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","9:ERP44:100052417:TEX10:100303842:rev:-","ERP44--TEX10",1.0,0.0,1.0,0.0,0.973,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.411,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PH-01A","11:AC068580.4:1753533:-:12:PTMS:6769603:+:fusion","AC068580.4--PTMS",1.0,0.0,1.0,0.0,0.87,false,0.0]
["TCGA-BLCA","TCGA-BT-A3PH-01A","12:TMED2:123590449:+:7:CLDN4:73828600:+:fusion","TMED2--CLDN4",2.0,162.0,2.0,0.0,0.524,false,0.0025974025974]
["TCGA-BLCA","TCGA-BT-A3PH-01A","15:PKM:72209733:-:12:TMBIM6:49741544:+:fusion","PKM--TMBIM6",2.0,0.0,1.0,0.0,0.468,false,0.0025974025974]
["TCGA-BLCA","TCGA-BT-A3PH-01A","15:TMED3:79316023:+:10:PSAP:71817476:-:fusion","TMED3--PSAP",2.0,0.0,1.0,0.0,0.169,false,0.012987012987]
["TCGA-BLCA","TCGA-BT-A3PH-01A","16:BCL7C:30893212:-:3:ALS2CL:46675976:-:fusion","BCL7C--ALS2CL",2.0,0.0,1.0,0.0,0.312,false,0.00779220779221]
["TCGA-BLCA","TCGA-BT-A3PH-01A","17:MRPL38:75898928:-:1:RUSC1:155325316:+:fusion","MRPL38--RUSC1",2.0,0.0,1.0,0.0,0.365,false,0.00779220779221]
["TCGA-BLCA","TCGA-BT-A3PH-01A","21:CSTB:43776204:-:11:ANO1:70189069:+:fusion","CSTB--ANO1",1.0,0.0,1.0,0.0,0.905,false,0.0]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.51,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.991,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",6.0,4613.0,511.0,496.0,0.447,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","21:WDR4:42843094:CBS:43055901:rev:-","WDR4--CBS",2.0,232.0,9.0,1.0,0.402,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","6:SRPK1:35833034:AL133507.1:35989902:rev:-","SRPK1--AL133507.1",5.0,0.0,15.0,0.0,0.497,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",6.0,0.0,1499.0,0.0,0.219,false,0.0165975103734]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","11:TRIM44:35663780:+:11:COMMD9:36280837:-:strandcross","TRIM44--COMMD9",1.0,0.0,1.0,0.0,0.84,false,0.0032414910859]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","17:YWHAE:1400047:-:15:B2M:44715423:+:fusion","YWHAE--B2M",1.0,9.0,2.0,0.0,0.97,false,0.00162074554295]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",3.0,0.0,319.0,0.0,0.194,false,0.0165975103734]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","2:TMSB10:84906117:+:16:TSNAXIP1:67827753:+:fusion","TMSB10--TSNAXIP1",2.0,0.0,9.0,0.0,0.394,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","3:RPL15:23919411:+:1:PTPN7:202148699:-:fusion","RPL15--PTPN7",2.0,0.0,1.0,0.0,0.278,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","4:DANCR:52712959:+:1:SERINC2:31432967:+:fusion","DANCR--SERINC2",1.0,25.0,8.0,3.0,0.743,false,0.0032414910859]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","4:HMGB2:173333500:-:1:LMNA:156137654:+:fusion","HMGB2--LMNA",1.0,0.0,1.0,0.0,0.822,false,0.0032414910859]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","5:CD74:150412625:-:11:TMEM132A:60927204:+:fusion","CD74--TMEM132A",2.0,0.0,1.0,0.0,0.43,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","6:ZNRD1ASP:30008632:-:6:HLA-C:31270331:-:rev","ZNRD1ASP--HLA-C",1.0,164.0,16.0,11.0,0.585,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","7:ACTB:5529282:-:11:EHBP1L1:65591800:+:fusion","ACTB--EHBP1L1",2.0,0.0,8.0,0.0,0.32,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PJ-01A","7:SEC61G:54752250:-:6:IGF2R:160044514:+:fusion","SEC61G--IGF2R",2.0,0.0,1.0,0.0,0.394,false,0.00486223662885]
["TCGA-BLCA","TCGA-BT-A3PK-01A","19:C19orf43:12734313:GADD45GIP1:12954526:rev:-","C19orf43--GADD45GIP1",1.0,0.0,1.0,0.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",2.0,2722.0,255.0,144.0,0.416,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",11.0,0.0,1126.0,0.0,0.449,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",4.0,2404.0,367.0,349.0,0.491,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","1:DUSP12:161753261:NDUFS2:161213090:rev:+","DUSP12--NDUFS2",2.0,22.0,4.0,1.0,0.41,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","1:HIVEP3:41918413:ZMYND12:42436543:rev:-","HIVEP3--ZMYND12",2.0,0.0,1.0,0.0,0.54,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","21:BACH1:29329693:MAP3K7CL:29130795:rev:+","BACH1--MAP3K7CL",1.0,0.0,1.0,0.0,0.896,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","21:PFKL:44312294:PDXK:43755698:rev:+","PFKL--PDXK",1.0,0.0,1.0,0.0,0.828,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.966,true,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","5:AC008695.1:131603271:FNIP1:131709272:rev:-","AC008695.1--FNIP1",1.0,0.0,1.0,0.0,0.965,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","8:IQANK1:143790135:GLI4:143269360:rev:+","IQANK1--GLI4",2.0,0.0,8.0,0.0,0.446,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","9:SET:128684007:SPTAN1:128566738:rev:+","SET--SPTAN1",1.0,0.0,1.0,0.0,0.929,false,"NA"]
["TCGA-BLCA","TCGA-BT-A3PK-01A","10:DDIT4:72274421:+:16:STUB1:681152:+:fusion","DDIT4--STUB1",2.0,0.0,1.0,0.0,0.352,false,0.00641025641026]
["TCGA-BLCA","TCGA-BT-A3PK-01A","11:MCAM:119311090:-:7:HNRNPA2B1:26197732:-:fusion","MCAM--HNRNPA2B1",12.0,0.0,37.0,0.0,0.348,false,0.00641025641026]
["TCGA-BLCA","TCGA-BT-A3PK-01A","12:CD27-AS1:6446961:-:14:NEDD8-MDP1:24218431:-:fusion","CD27-AS1--NEDD8-MDP1",2.0,128.0,1.0,1.0,0.168,true,0.0277777777778]
["TCGA-BLCA","TCGA-BT-A3PK-01A","12:MON2:62467318:+:12:MDM2:68809208:+:reg","MON2--MDM2",1.0,0.0,1.0,0.0,0.779,false,0.00213675213675]
["TCGA-BLCA","TCGA-BT-A3PK-01A","17:COL1A1:50186640:-:19:BST2:17403326:-:fusion","COL1A1--BST2",4.0,1.0,13.0,0.0,0.171,false,0.0277777777778]
["TCGA-BLCA","TCGA-BT-A3PK-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",3.0,0.0,260.0,0.0,0.171,false,0.0167224080268]
["TCGA-BLCA","TCGA-BT-A3PK-01A","1:LRP8:53246553:-:6:SYCP2L:10974768:+:fusion","LRP8--SYCP2L",2.0,0.0,30.0,0.0,0.441,false,0.0042735042735]
["TCGA-BLCA","TCGA-BT-A3PK-01A","20:PI3:45176136:+:19:FUZ:49808488:-:fusion","PI3--FUZ",2.0,0.0,1.0,0.0,0.441,false,0.0042735042735]
["TCGA-BLCA","TCGA-BT-A3PK-01A","2:TMSB10:84906117:+:19:LSR:35267109:+:fusion","TMSB10--LSR",3.0,0.0,69.0,0.0,0.286,false,0.017094017094]
["TCGA-BLCA","TCGA-BT-A3PK-01A","3:RPN1:128622164:-:14:FOS:75280783:+:fusion","RPN1--FOS",2.0,0.0,1.0,0.0,0.396,false,0.00641025641026]
["TCGA-BLCA","TCGA-BT-A3PK-01A","7:PHF14:11062589:+:2:COL3A1:189002298:+:fusion","PHF14--COL3A1",2.0,0.0,1.0,0.0,0.304,false,0.0128205128205]
["TCGA-BLCA","TCGA-BT-A3PK-01A","8:PPP2CB:30812320:-:1:MYOC:171638722:-:fusion","PPP2CB--MYOC",3.0,0.0,1.0,0.0,0.611,false,0.0042735042735]
["TCGA-BLCA","TCGA-BT-A42C-01A","12:AC078923.1:75631167:NAP1L1:76060279:rev:-","AC078923.1--NAP1L1",1.0,0.0,1.0,0.0,0.959,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","12:RAB3IP:69812834:AC025263.2:69801669:rev:+","RAB3IP--AC025263.2",1.0,0.0,1.0,0.0,0.967,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",2.0,2732.0,181.0,181.0,0.404,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",6.0,4613.0,511.0,496.0,0.417,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",7.0,6005.0,679.0,674.0,0.438,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",53.0,9462.0,7336.0,7317.0,0.918199279824962,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","2:IAH1:9481447:ASAP2:9356047:rev:+","IAH1--ASAP2",1.0,0.0,1.0,0.0,0.864,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.565,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42C-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",20.0,1558.0,165.0,160.0,0.708018165459715,true,0.0056657223796]
["TCGA-BLCA","TCGA-BT-A42C-01A","12:RAP1B:68611043:+:12:TSPAN8:71282819:-:strandcross","RAP1B--TSPAN8",1.0,0.0,1.0,0.0,0.68,false,0.0056657223796]
["TCGA-BLCA","TCGA-BT-A42E-01A","12:RILPL1:123498544:AC055713.1:123583698:rev:-","RILPL1--AC055713.1",1.0,0.0,1.0,0.0,0.9,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42E-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",6.0,4613.0,511.0,496.0,0.453,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42E-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.405,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42E-01A","5:MARCH6:10378832:CCT5:10264656:rev:+","MARCH6--CCT5",1.0,0.0,1.0,0.0,0.996,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42E-01A","12:KRT5:52514996:-:7:SEM1:96709861:-:fusion","KRT5--SEM1",2.0,0.0,6.0,0.0,0.167,false,0.0181818181818]
["TCGA-BLCA","TCGA-BT-A42E-01A","15:AC107976.2:94856719:-:19:NOP53:47755474:+:fusion","AC107976.2--NOP53",2.0,67.0,90.0,15.0,0.93,true,0.0]
["TCGA-BLCA","TCGA-BT-A42E-01A","17:RPL19:39202439:+:22:LMF2:50507684:-:fusion","RPL19--LMF2",2.0,0.0,1.0,0.0,0.203,false,0.0181818181818]
["TCGA-BLCA","TCGA-BT-A42E-01A","1:MIR205HG:209430500:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,1.0,18.0,1.0,0.937,false,0.0]
["TCGA-BLCA","TCGA-BT-A42E-01A","7:POT1:124928815:-:10:RTKN2:62199861:-:fusion","POT1--RTKN2",2.0,0.0,1.0,0.0,0.684,false,0.00727272727273]
["TCGA-BLCA","TCGA-BT-A42F-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.442,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",4.0,5703.0,236.0,234.0,0.442,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",7.0,0.0,423.0,0.0,0.581,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",5.0,6005.0,679.0,674.0,0.57,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",9.0,0.0,1126.0,0.0,0.577,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",4.0,0.0,147.0,0.0,0.615,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","1:EMC1:19251415:CAPZB:19357563:rev:-","EMC1--CAPZB",2.0,1.0,1.0,0.0,0.761,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",12.0,8277.0,230.0,230.0,0.803,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.998,true,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.59,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.805,false,"NA"]
["TCGA-BLCA","TCGA-BT-A42F-01A","11:CTSC:88334937:-:8:CEBPD:47739086:-:fusion","CTSC--CEBPD",2.0,0.0,1.0,0.0,0.262,false,0.015873015873]
["TCGA-BLCA","TCGA-BT-A42F-01A","17:AC027601.1:81233601:+:2:IGKC:88857683:-:fusion","AC027601.1--IGKC",3.0,0.0,28.0,0.0,0.214,false,0.0194003527337]
["TCGA-BLCA","TCGA-BT-A42F-01A","19:SPINT2:38292468:+:20:HM13:31567640:+:fusion","SPINT2--HM13",2.0,0.0,1.0,0.0,0.369,false,0.010582010582]
["TCGA-BLCA","TCGA-BT-A42F-01A","22:EIF3L:37850574:+:11:PRDX5:64319734:+:fusion","EIF3L--PRDX5",3.0,6609.0,3.0,3.0,0.295,true,0.0123456790123]
["TCGA-BLCA","TCGA-BT-A42F-01A","5:HSPA9:138555360:-:20:GID8:62941491:+:fusion","HSPA9--GID8",5.0,0.0,2.0,0.0,0.368,false,0.010582010582]
["TCGA-BLCA","TCGA-BT-A42F-01A","5:VCAN:83581336:+:10:HELLS:94571388:+:fusion","VCAN--HELLS",5.0,0.0,31.0,0.0,0.348,false,0.010582010582]
["TCGA-BLCA","TCGA-BT-A42F-01A","7:LANCL2:55391910:+:7:LSM5:32489344:-:strandcross","LANCL2--LSM5",2.0,0.0,1.0,0.0,0.242,false,0.0176366843034]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","14:KIAA0391:35180777:FAM177A1:35077150:rev:+","KIAA0391--FAM177A1",1.0,2.0,4.0,2.0,0.912,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",47.0,9462.0,7336.0,7317.0,0.955557673411858,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","2:KIF3C:25980373:HADHA:26209889:rev:-","KIF3C--HADHA",1.0,0.0,1.0,0.0,0.93,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",19.0,210.0,4870.0,17.0,0.784606108956614,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",4.0,1067.0,394.0,191.0,0.177,true,0.0274390243902]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",13.0,0.0,297.0,0.0,0.238,false,0.0213414634146]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","4:NPNT:105898001:+:4:TBCK:106046680:-:strandcross","NPNT--TBCK",1.0,0.0,1.0,0.0,0.723,false,0.0030487804878]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",10.0,0.0,192.0,0.0,0.159,false,0.030487804878]
["TCGA-BLCA","TCGA-C4-A0EZ-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",6.0,2324.0,521.0,517.0,0.311,true,0.00452488687783]
["TCGA-BLCA","TCGA-C4-A0F0-01A","14:FRMD6:51570410:TMX1:51249326:rev:+","FRMD6--TMX1",2.0,0.0,1.0,0.0,0.861,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.402,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","17:NAA38:7856685:MYH10:8493898:rev:-","NAA38--MYH10",3.0,0.0,24.0,0.0,0.418,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",4.0,0.0,495.0,0.0,0.464,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.578,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","7:LUC7L2:139376156:UBN2:139237005:rev:+","LUC7L2--UBN2",1.0,0.0,1.0,0.0,0.972,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.665,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F0-01A","11:YAP1:102114394:+:11:MMP20:102579142:-:strandcross","YAP1--MMP20",2.0,0.0,1.0,0.0,0.176,false,0.0314465408805]
["TCGA-BLCA","TCGA-C4-A0F1-01A","14:TRAF3:102809129:LINC02323:102554710:rev:+","TRAF3--LINC02323",2.0,1011.0,34.0,32.0,0.533,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F1-01A","19:DMKN:35498717:POLR2I:36114906:rev:-","DMKN--POLR2I",5.0,0.0,15.0,0.0,0.61,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F1-01A","1:COA7:52684451:ECHDC2:52912225:rev:-","COA7--ECHDC2",3.0,781.0,15.0,14.0,0.495,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.966,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F1-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.641,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F1-01A","17:COL1A1:50186317:-:2:SFXN5:73071289:-:fusion","COL1A1--SFXN5",3.0,0.0,2.0,0.0,0.291,false,0.0232018561485]
["TCGA-BLCA","TCGA-C4-A0F1-01A","1:C1orf106:200914595:+:12:ADIPOR2:1783880:+:fusion","C1orf106--ADIPOR2",2.0,1942.0,1.0,1.0,0.641,true,0.0092807424594]
["TCGA-BLCA","TCGA-C4-A0F1-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",2.0,315.0,342.0,224.0,0.813,true,0.00696055684455]
["TCGA-BLCA","TCGA-C4-A0F1-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",1.0,2010.0,1976.0,1665.0,0.709,false,0.00696055684455]
["TCGA-BLCA","TCGA-C4-A0F1-01A","8:NDRG1:133237176:-:19:FXYD3:35121222:+:fusion","NDRG1--FXYD3",2.0,0.0,1.0,0.0,0.327,false,0.0185614849188]
["TCGA-BLCA","TCGA-C4-A0F1-01A","X:SLC25A6:1387345:-:17:GRN:44349667:+:fusion","SLC25A6--GRN",2.0,0.0,5.0,0.0,0.489,false,0.0162412993039]
["TCGA-BLCA","TCGA-C4-A0F6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.936,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F6-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.693,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F6-01A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",3.0,0.0,91.0,0.0,0.382,false,0.025641025641]
["TCGA-BLCA","TCGA-C4-A0F7-01A","10:SVIL:29657969:KIAA1462:30047871:rev:-","SVIL--KIAA1462",1.0,0.0,1.0,0.0,0.928,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F7-01A","14:ZFYVE21:103715979:KLC1:103700655:rev:+","ZFYVE21--KLC1",1.0,14.0,33.0,4.0,0.971,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F7-01A","15:AKAP13:85380798:PDE8A:85136534:rev:+","AKAP13--PDE8A",1.0,0.0,2.0,0.0,0.986,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.723922474270666,true,"NA"]
["TCGA-BLCA","TCGA-C4-A0F7-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",3.0,35.0,139.0,0.0,0.417,false,"NA"]
["TCGA-BLCA","TCGA-C4-A0F7-01A","12:KRT5:52516637:-:14:HNRNPC:21211903:-:fusion","KRT5--HNRNPC",1.0,0.0,1.0,0.0,0.846,false,0.00588235294118]
["TCGA-BLCA","TCGA-C4-A0F7-01A","12:KRT5:52516690:-:17:FLII:18254630:-:fusion","KRT5--FLII",2.0,4.0,3.0,0.0,0.537,false,0.00882352941176]
["TCGA-BLCA","TCGA-C4-A0F7-01A","17:KRT13:41505056:-:17:ACTG1:81510833:-:rev","KRT13--ACTG1",1.0,1.0,1.0,0.0,0.663,false,0.00882352941176]
["TCGA-BLCA","TCGA-C4-A0F7-01A","17:PGS1:78419725:+:17:NAT9:74773685:-:strandcross","PGS1--NAT9",1.0,0.0,1.0,0.0,0.715,false,0.00882352941176]
["TCGA-BLCA","TCGA-C4-A0F7-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,315.0,342.0,224.0,0.802,false,0.00588235294118]
["TCGA-BLCA","TCGA-C4-A0F7-01A","3:CTNNB1:41239354:+:17:TK1:78174950:-:fusion","CTNNB1--TK1",2.0,0.0,14.0,0.0,0.347,false,0.0147058823529]
["TCGA-BLCA","TCGA-C4-A0F7-01A","6:SLC39A7:33200938:+:1:EPHA2:16125320:-:fusion","SLC39A7--EPHA2",1.0,0.0,1.0,0.0,0.813,false,0.00588235294118]
["TCGA-BLCA","TCGA-CF-A1HR-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",2.0,2439.0,257.0,256.0,0.427,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HR-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",9.0,2011.0,360.0,280.0,0.628,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HR-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.773,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HR-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.502,false,"NA"]
["TCGA-BLCA","TCGA-CF-A1HR-01A","11:FTH1:61964838:-:19:AC011511.2:10260428:-:fusion","FTH1--AC011511.2",2.0,0.0,1.0,0.0,0.161,false,0.0592105263158]
["TCGA-BLCA","TCGA-CF-A1HR-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.399,true,0.0197368421053]
["TCGA-BLCA","TCGA-CF-A1HR-01A","22:CELSR1:46533627:-:17:H3F3B:75779184:-:fusion","CELSR1--H3F3B",1.0,0.0,1.0,0.0,0.802,false,0.00657894736842]
["TCGA-BLCA","TCGA-CF-A1HR-01A","2:IGKC:88857161:-:3:MKRN2:12581808:+:fusion","IGKC--MKRN2",3.0,0.0,8.0,0.0,0.255,false,0.0328947368421]
["TCGA-BLCA","TCGA-CF-A1HS-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",2.0,2732.0,181.0,181.0,0.431,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HS-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.487,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HS-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.901,true,"NA"]
["TCGA-BLCA","TCGA-CF-A1HS-01A","3:NEK11:131029878:ATP2C1:130959275:rev:+","NEK11--ATP2C1",1.0,0.0,1.0,0.0,0.914,false,"NA"]
["TCGA-BLCA","TCGA-CF-A1HS-01A","7:TMEM140:135148270:BPGM:134678853:rev:+","TMEM140--BPGM",1.0,0.0,2.0,0.0,0.868,false,"NA"]
["TCGA-BLCA","TCGA-CF-A1HS-01A","12:RNFT2:116754060:+:12:HRK:116861466:-:strandcross","RNFT2--HRK",2.0,0.0,1.0,0.0,0.855,false,0.00467289719626]
["TCGA-BLCA","TCGA-CF-A1HS-01A","3:FOXP1:71493426:-:3:LINC02005:73869776:+:strandcross","FOXP1--LINC02005",4.0,0.0,1.0,0.0,0.718,false,0.00934579439252]
["TCGA-BLCA","TCGA-CF-A1HS-01A","6:DNAH8:38723471:+:6:AL035401.1:23016820:-:strandcross","DNAH8--AL035401.1",1.0,0.0,1.0,0.0,0.768,false,0.00467289719626]
["TCGA-BLCA","TCGA-CF-A27C-01A","19:DOT1L:2164265:CSNK1G2:1978305:rev:+","DOT1L--CSNK1G2",1.0,0.0,1.0,0.0,0.88,false,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.5,true,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","1:FAM189B:155247217:GON4L:155784389:rev:-","FAM189B--GON4L",2.0,1546.0,73.0,71.0,0.408,true,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.911,true,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",6.0,97.0,99.0,0.0,0.504,false,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","4:HNRNPD:82355304:HNRNPDL:82424883:rev:-","HNRNPD--HNRNPDL",1.0,7.0,12.0,4.0,0.875,false,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.673,false,"NA"]
["TCGA-BLCA","TCGA-CF-A27C-01A","12:AC006064.4:6537794:-:7:ABHD11-AS1:73735728:+:fusion","AC006064.4--ABHD11-AS1",2.0,0.0,11.0,0.0,0.327,false,0.00371057513915]
["TCGA-BLCA","TCGA-CF-A27C-01A","16:ANKRD11:89418284:-:16:FENDRR:86491004:-:reg","ANKRD11--FENDRR",1.0,0.0,1.0,0.0,0.783,false,0.00371057513915]
["TCGA-BLCA","TCGA-CF-A3MF-01A","17:TRAPPC1:7930349:MYH10:8493898:rev:-","TRAPPC1--MYH10",6.0,0.0,110.0,0.0,0.439,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MF-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",5.0,2909.0,156.0,153.0,0.464,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MF-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",11.0,915.0,236.0,214.0,0.681,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MF-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.474,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MF-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.514,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","10:CCAR1:68786692:HNRNPH3:68341174:rev:+","CCAR1--HNRNPH3",1.0,0.0,2.0,0.0,0.968,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",2.0,198.0,115.0,72.0,0.859,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","15:AC013394.1:92901299:LINC01578:92892004:rev:+","AC013394.1--LINC01578",1.0,3.0,19.0,2.0,0.97,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","17:TP53I13:29572665:NEK8:28738095:rev:+","TP53I13--NEK8",2.0,0.0,1.0,0.0,0.458,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.456,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.481,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MG-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",6.0,0.0,1499.0,0.0,0.269,false,0.0]
["TCGA-BLCA","TCGA-CF-A3MG-01A","14:AL512361.1:49374383:+:12:ATP5G2:53665428:-:fusion","AL512361.1--ATP5G2",2.0,0.0,3.0,0.0,0.21,false,0.037037037037]
["TCGA-BLCA","TCGA-CF-A3MG-01A","15:PKM:72209673:-:1:MRPS15:36457981:-:fusion","PKM--MRPS15",2.0,0.0,1.0,0.0,0.306,false,0.0288065843621]
["TCGA-BLCA","TCGA-CF-A3MG-01A","4:MAPK10:86107223:-:10:MAPK8:48434884:+:fusion","MAPK10--MAPK8",3.0,0.0,1.0,0.0,0.456,false,0.0]
["TCGA-BLCA","TCGA-CF-A3MG-01A","9:RPS6:19378368:-:3:GLT8D1:52696580:-:fusion","RPS6--GLT8D1",2.0,0.0,1.0,0.0,0.338,false,0.0288065843621]
["TCGA-BLCA","TCGA-CF-A3MH-01A","12:SPATS2:49490731:TUBA1C:49269465:rev:+","SPATS2--TUBA1C",1.0,0.0,1.0,0.0,0.941,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MH-01A","19:ZNF738:21375964:ZNF430:21056631:rev:+","ZNF738--ZNF430",1.0,3551.0,102.0,73.0,0.805,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MH-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",9.0,915.0,236.0,214.0,0.583,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.674,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MH-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",29.0,1558.0,165.0,160.0,0.286075914997626,true,0.0117994100295]
["TCGA-BLCA","TCGA-CF-A3MH-01A","13:TPT1:45340712:-:12:AC127070.1:132825701:+:fusion","TPT1--AC127070.1",2.0,53.0,3.0,2.0,0.976,true,0.0]
["TCGA-BLCA","TCGA-CF-A3MH-01A","19:TSEN34:54192373:+:3:WDR6:49013042:+:fusion","TSEN34--WDR6",2.0,0.0,1.0,0.0,0.521,false,0.00294985250737]
["TCGA-BLCA","TCGA-CF-A3MH-01A","1:DEDD:161122025:-:17:AC019349.1:41500983:+:fusion","DEDD--AC019349.1",4.0,799.0,5.0,5.0,0.203,true,0.0147492625369]
["TCGA-BLCA","TCGA-CF-A3MI-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.477,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MI-01A","17:SAT2:7626234:MYH10:8493898:rev:-","SAT2--MYH10",5.0,0.0,15.0,0.0,0.441,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MI-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.922,true,"NA"]
["TCGA-BLCA","TCGA-CF-A3MI-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",7.0,97.0,99.0,0.0,0.405,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MI-01A","3:QARS:49095934:AC104452.1:49423856:rev:-","QARS--AC104452.1",9.0,64.0,88.0,0.0,0.467,false,"NA"]
["TCGA-BLCA","TCGA-CF-A3MI-01A","11:KBTBD4:47578912:-:11:AC132217.1:2129449:-:reg","KBTBD4--AC132217.1",3.0,0.0,1.0,0.0,0.226,false,0.019305019305]
["TCGA-BLCA","TCGA-CF-A3MI-01A","12:LIMA1:50248633:-:12:TAOK3:118244965:-:rev","LIMA1--TAOK3",4.0,0.0,1.0,0.0,0.637,false,0.015444015444]
["TCGA-BLCA","TCGA-CF-A3MI-01A","19:RPL18:48619141:-:10:RPS24:78035352:+:fusion","RPL18--RPS24",4.0,1.0,1.0,0.0,0.304,false,0.015444015444]
["TCGA-BLCA","TCGA-CF-A3MI-01A","20:MYH7B:35002085:+:9:RPS6:19378514:-:fusion","MYH7B--RPS6",3.0,0.0,2.0,0.0,0.167,false,0.023166023166]
["TCGA-BLCA","TCGA-CF-A3MI-01A","7:HSPB1:76303727:+:12:KRT7:52245439:+:fusion","HSPB1--KRT7",3.0,0.0,1.0,0.0,0.227,false,0.019305019305]
["TCGA-BLCA","TCGA-CF-A47S-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",17.0,0.0,1758.0,0.0,0.442883619562511,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","17:COA3:42797634:AARSD1:42955456:rev:-","COA3--AARSD1",2.0,4147.0,74.0,73.0,0.61,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","17:HID1:74950743:UNC13D:75841156:rev:-","HID1--UNC13D",7.0,429.0,42.0,22.0,0.441,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.546,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",13.0,4613.0,511.0,496.0,0.421,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",15.0,0.0,495.0,0.0,0.581,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:TNPO2:12714821:PRDX2:12797166:rev:-","TNPO2--PRDX2",2.0,0.0,1.0,0.0,0.769,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",5.0,2404.0,367.0,349.0,0.58,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",5.0,2061.0,160.0,157.0,0.512,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",3.0,821.0,85.0,71.0,0.411,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",20.0,8277.0,230.0,230.0,0.731729391555229,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",7.0,1673.0,620.0,414.0,0.769,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","6:MDC1:30699807:FLOT1:30740853:rev:-","MDC1--FLOT1",3.0,1217.0,58.0,53.0,0.416,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","6:PPP1R10:30600400:FLOT1:30740853:rev:-","PPP1R10--FLOT1",2.0,2233.0,39.0,38.0,0.405,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",41.0,210.0,4870.0,17.0,0.599199320559818,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:AC022154.1:48620799:-:1:DHRS3:12568424:-:fusion","AC022154.1--DHRS3",2.0,25.0,1.0,1.0,0.557,true,0.00252206809584]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:RPS19:41869087:+:15:SERF2:43792975:+:fusion","RPS19--SERF2",2.0,0.0,1.0,0.0,0.166,false,0.0113493064313]
["TCGA-BLCA","TCGA-CF-A47S-01A","19:UBA52:18572607:+:15:CIB1:90232327:-:fusion","UBA52--CIB1",1.0,429.0,1.0,1.0,0.751,true,0.00126103404792]
["TCGA-BLCA","TCGA-CF-A47S-01A","22:APOL1:36266107:+:19:AC020909.3:50483351:-:fusion","APOL1--AC020909.3",2.0,371.0,8.0,0.0,0.409,false,0.00504413619168]
["TCGA-BLCA","TCGA-CF-A47S-01A","22:APOL1:36266107:+:21:SOD1:31659693:+:fusion","APOL1--SOD1",4.0,0.0,3.0,0.0,0.591,false,0.00252206809584]
["TCGA-BLCA","TCGA-CF-A47S-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",24.0,2010.0,1976.0,1665.0,0.897172757930737,true,0.0]
["TCGA-BLCA","TCGA-CF-A47S-01A","9:GSN:121318494:+:15:SERF2:43793710:+:fusion","GSN--SERF2",2.0,0.0,1.0,0.0,0.451,false,0.00378310214376]
["TCGA-BLCA","TCGA-CF-A47T-01A","15:MTHFS:79889093:ST20:79907684:rev:-","MTHFS--ST20",1.0,6.0,12.0,3.0,0.927,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","19:RANBP3:5917322:DENND1C:6477588:rev:-","RANBP3--DENND1C",8.0,0.0,69.0,0.0,0.465,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.811,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",8.0,97.0,99.0,0.0,0.462,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",5.0,5352.0,117.0,117.0,0.488,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.828356341637146,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47T-01A","12:HIP1R:122861997:+:12:KRT7:52248177:+:rev","HIP1R--KRT7",2.0,0.0,1.0,0.0,0.36,false,0.00753768844221]
["TCGA-BLCA","TCGA-CF-A47T-01A","16:AC026471.3:31487370:-:11:AC132217.1:2129449:-:fusion","AC026471.3--AC132217.1",2.0,0.0,2.0,0.0,0.24,false,0.0125628140704]
["TCGA-BLCA","TCGA-CF-A47T-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,315.0,342.0,224.0,0.906,false,0.0]
["TCGA-BLCA","TCGA-CF-A47T-01A","3:AC092691.1:117997182:-:3:LSAMP:115842578:-:reg","AC092691.1--LSAMP",1.0,1.0,1.0,0.0,0.703,false,0.00251256281407]
["TCGA-BLCA","TCGA-CF-A47V-01A","17:NF1:31095369:RNF135:30984617:rev:+","NF1--RNF135",1.0,1.0,3.0,0.0,0.842,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47V-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.787,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47V-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.525,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47V-01A","6:PDE7B:135947524:LINC00271:135642193:rev:+","PDE7B--LINC00271",1.0,0.0,1.0,0.0,0.852,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47V-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.571,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47V-01A","10:AL136982.7:86970237:-:20:PPDPF:63521668:+:fusion","AL136982.7--PPDPF",3.0,0.0,1.0,0.0,0.593,false,0.00581395348837]
["TCGA-BLCA","TCGA-CF-A47V-01A","11:AP002990.1:62572584:-:10:SNCG:86962604:+:fusion","AP002990.1--SNCG",2.0,0.0,1.0,0.0,0.505,false,0.00581395348837]
["TCGA-BLCA","TCGA-CF-A47V-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.598,false,0.0]
["TCGA-BLCA","TCGA-CF-A47V-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.241,true,0.0116279069767]
["TCGA-BLCA","TCGA-CF-A47V-01A","6:HLA-E:30489595:+:6:HLA-B:31356957:-:strandcross","HLA-E--HLA-B",6.0,10194.0,137.0,137.0,0.237,true,0.0093023255814]
["TCGA-BLCA","TCGA-CF-A47W-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.502,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47W-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",15.0,4613.0,511.0,496.0,0.561,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47W-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",41.0,0.0,1126.0,0.0,0.658341461790791,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47W-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",5.0,5022.0,244.0,241.0,0.468,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47W-01A","3:QARS:49095934:AC104452.1:49423856:rev:-","QARS--AC104452.1",8.0,64.0,88.0,0.0,0.456,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47W-01A","17:SCARF1:1634390:-:19:AC008655.1:50310539:-:fusion","SCARF1--AC008655.1",16.0,2798.0,3.0,3.0,0.777649488124331,true,0.00209205020921]
["TCGA-BLCA","TCGA-CF-A47W-01A","1:UHMK1:162529610:+:17:CLDN7:7262945:-:fusion","UHMK1--CLDN7",3.0,4.0,1.0,0.0,0.161,false,0.0146443514644]
["TCGA-BLCA","TCGA-CF-A47W-01A","3:GNAI2:50258898:+:2:MBD5:148021756:+:fusion","GNAI2--MBD5",3.0,0.0,1.0,0.0,0.495,false,0.0]
["TCGA-BLCA","TCGA-CF-A47W-01A","7:HNRNPA2B1:26192495:-:17:KRT13:41501362:-:fusion","HNRNPA2B1--KRT13",1.0,0.0,1.0,0.0,0.746,false,0.00209205020921]
["TCGA-BLCA","TCGA-CF-A47X-01A","11:LAMTOR1:72098289:ARAP1:72732597:rev:-","LAMTOR1--ARAP1",1.0,0.0,1.0,0.0,0.953,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","17:MRPS23:57849240:AC015813.1:57989796:rev:-","MRPS23--AC015813.1",1.0,1.0,5.0,1.0,0.923,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",5.0,6005.0,679.0,674.0,0.477,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","1:NIPAL3:24419640:RPL11:23695798:rev:+","NIPAL3--RPL11",1.0,0.0,1.0,0.0,0.964,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.828,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","2:LINC01907:230700323:NCL:231460866:rev:-","LINC01907--NCL",1.0,200.0,63.0,17.0,0.923,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","3:PIK3CB:138834695:COPB2:139367145:rev:-","PIK3CB--COPB2",1.0,0.0,1.0,0.0,0.923,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.468,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",5.0,298.0,112.0,87.0,0.847,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.637,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47X-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",8.0,1558.0,165.0,160.0,0.466,true,0.00255102040816]
["TCGA-BLCA","TCGA-CF-A47X-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.174,false,0.0078431372549]
["TCGA-BLCA","TCGA-CF-A47X-01A","17:SLC5A10:18950858:+:10:GDI2:5795019:-:fusion","SLC5A10--GDI2",13.0,412.0,4.0,2.0,0.311,true,0.00255102040816]
["TCGA-BLCA","TCGA-CF-A47X-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,315.0,342.0,224.0,0.686,false,0.0]
["TCGA-BLCA","TCGA-CF-A47X-01A","1:PRCC:156800771:+:5:TMEM173:139482698:-:fusion","PRCC--TMEM173",4.0,1.0,1.0,0.0,0.21,false,0.00765306122449]
["TCGA-BLCA","TCGA-CF-A47X-01A","20:CYP24A1:54157169:-:12:AC021054.1:643959:+:fusion","CYP24A1--AC021054.1",1.0,1.0,1.0,0.0,0.726,false,0.0]
["TCGA-BLCA","TCGA-CF-A47X-01A","4:HPGD:174523012:-:12:OAS1:112916509:+:fusion","HPGD--OAS1",2.0,0.0,1.0,0.0,0.249,false,0.00510204081633]
["TCGA-BLCA","TCGA-CF-A47X-01A","5:TMEM161B:88268721:-:5:TMEM161B-AS1:88436273:+:strandcross","TMEM161B--TMEM161B-AS1",1.0,2.0,4.0,2.0,0.902,false,0.0]
["TCGA-BLCA","TCGA-CF-A47Y-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",8.0,0.0,1758.0,0.0,0.645,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","17:SPATA20:50552180:MYCBPAP:50530213:rev:+","SPATA20--MYCBPAP",2.0,0.0,1.0,0.0,0.414,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.454,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","19:MAN2B1:12646516:HOOK2:12773253:rev:-","MAN2B1--HOOK2",2.0,835.0,50.0,45.0,0.436,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",2.0,0.0,147.0,0.0,0.432,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.514,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","1:PBXIP1:154944076:GON4L:155784389:rev:-","PBXIP1--GON4L",3.0,1127.0,59.0,59.0,0.491,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","1:TXNDC12:52020131:ECHDC2:52912225:rev:-","TXNDC12--ECHDC2",4.0,8272.0,46.0,46.0,0.41,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.829,true,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.477,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",20.0,210.0,4870.0,17.0,0.855647371357803,false,"NA"]
["TCGA-BLCA","TCGA-CF-A47Y-01A","22:APOL1:36266107:+:19:AC092069.1:12944487:-:fusion","APOL1--AC092069.1",11.0,1039.0,28.0,1.0,0.358,false,0.00519480519481]
["TCGA-BLCA","TCGA-CF-A47Y-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",11.0,2010.0,1976.0,1665.0,0.84,true,0.0025974025974]
["TCGA-BLCA","TCGA-CF-A47Y-01A","5:HSPA9:138555360:-:16:AC099518.5:19121629:-:fusion","HSPA9--AC099518.5",6.0,2363.0,1.0,1.0,0.185,true,0.0103896103896]
["TCGA-BLCA","TCGA-CF-A5U8-01A","10:KIF1BP:68995278:CCAR1:68771206:rev:+","KIF1BP--CCAR1",3.0,216.0,7.0,6.0,0.64,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,1126.0,0.0,0.421,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",14.0,9462.0,7336.0,7317.0,0.997,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.415,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.53,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",21.0,210.0,4870.0,17.0,0.504177315576046,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5U8-01A","11:AC004923.1:67955482:-:7:ASNS:97869813:-:fusion","AC004923.1--ASNS",3.0,693.0,14.0,8.0,0.759,true,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5U8-01A","11:AP003385.3:67682772:-:5:RPL37:40835212:-:fusion","AP003385.3--RPL37",1.0,0.0,1.0,0.0,0.853,false,0.0]
["TCGA-BLCA","TCGA-CF-A5U8-01A","1:S100A6:153535202:-:17:SLC38A10:81247061:-:fusion","S100A6--SLC38A10",2.0,0.0,1.0,0.0,0.32,false,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5U8-01A","22:APOL1:36267525:+:10:BBIP1:110901612:-:fusion","APOL1--BBIP1",5.0,0.0,1.0,0.0,0.254,false,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5U8-01A","2:CEBPZOS:37204741:+:17:AC130324.1:30864940:-:fusion","CEBPZOS--AC130324.1",16.0,5006.0,56.0,52.0,0.341380050692739,true,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5U8-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",39.0,2010.0,1976.0,1665.0,0.8296932988604,true,0.0]
["TCGA-BLCA","TCGA-CF-A5U8-01A","6:UQCC2:33697568:-:2:PCBP1-AS1:70087343:-:fusion","UQCC2--PCBP1-AS1",3.0,33.0,10.0,0.0,0.733,false,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5U8-01A","8:RPL8:144789769:-:17:CDK5RAP3:47979217:+:fusion","RPL8--CDK5RAP3",2.0,0.0,1.0,0.0,0.174,false,0.00301204819277]
["TCGA-BLCA","TCGA-CF-A5UA-01A","16:CNOT1:58520684:AC012183.1:58706297:rev:-","CNOT1--AC012183.1",4.0,839.0,41.0,39.0,0.405,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",25.0,5703.0,236.0,234.0,0.547584560579647,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",6.0,2732.0,181.0,181.0,0.566,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",5.0,4613.0,511.0,496.0,0.433,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",52.0,0.0,1126.0,0.0,0.509322966460405,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",6.0,2404.0,367.0,349.0,0.55,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",6.0,5022.0,244.0,241.0,0.504,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",10.0,3449.0,231.0,225.0,0.61,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",12.0,8277.0,230.0,230.0,0.472,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.491,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",16.0,7.0,180.0,0.0,0.662062693249384,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","6:PPT2-EGFL8:32167429:C6orf48:31835411:rev:+","PPT2-EGFL8--C6orf48",3.0,0.0,2.0,0.0,0.428,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","7:BMT2:112819147:GPR85:113086414:rev:-","BMT2--GPR85",3.0,832.0,56.0,46.0,0.455,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","8:KAT6A:41929479:PLAT:42193727:rev:-","KAT6A--PLAT",3.0,1310.0,32.0,23.0,0.424,true,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",60.0,210.0,4870.0,17.0,0.79306759423197,false,"NA"]
["TCGA-BLCA","TCGA-CF-A5UA-01A","11:MMP12:102862736:-:17:AC130324.1:30864940:-:fusion","MMP12--AC130324.1",8.0,1081.0,16.0,7.0,0.689,false,0.0]
["TCGA-BLCA","TCGA-CF-A5UA-01A","12:CAND1:67269785:+:9:CNTNAP3:39133132:-:fusion","CAND1--CNTNAP3",2.0,0.0,1.0,0.0,0.511,false,0.0]
["TCGA-BLCA","TCGA-CF-A5UA-01A","12:CPSF6:69262562:+:9:C9orf3:95086682:+:fusion","CPSF6--C9orf3",5.0,134.0,130.0,48.0,0.343,true,0.0]
["TCGA-BLCA","TCGA-CF-A5UA-01A","17:PGS1:78378808:+:16:KIF22:29804814:+:fusion","PGS1--KIF22",3.0,0.0,80.0,0.0,0.297,false,0.00993377483444]
["TCGA-BLCA","TCGA-CF-A5UA-01A","19:AC010326.3:57867038:-:19:AC020909.3:50483351:-:reg","AC010326.3--AC020909.3",13.0,1816.0,1.0,0.0,0.282,false,0.0]
["TCGA-BLCA","TCGA-CF-A5UA-01A","19:RRAS:49635812:-:12:KRT7:52248591:+:fusion","RRAS--KRT7",5.0,0.0,1.0,0.0,0.184,false,0.0040733197556]
["TCGA-BLCA","TCGA-CF-A5UA-01A","4:S100P:6694070:+:14:DHRS1:24292701:-:fusion","S100P--DHRS1",2.0,0.0,1.0,0.0,0.305,false,0.0]
["TCGA-BLCA","TCGA-CF-A5UA-01A","6:ATXN1:16753233:-:4:AC093864.2:145600396:+:fusion","ATXN1--AC093864.2",1.0,0.0,1.0,0.0,0.939,false,0.0]
["TCGA-BLCA","TCGA-CF-A7I0-01A","14:CIPC:77099961:LRRC74A:76865968:rev:+","CIPC--LRRC74A",2.0,0.0,1.0,0.0,0.549,false,"NA"]
["TCGA-BLCA","TCGA-CF-A7I0-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",3.0,0.0,267.0,0.0,0.537,false,"NA"]
["TCGA-BLCA","TCGA-CF-A7I0-01A","19:MAP2K2:4110509:SH3GL1:4366994:rev:-","MAP2K2--SH3GL1",2.0,0.0,1.0,0.0,0.449,false,"NA"]
["TCGA-BLCA","TCGA-CF-A7I0-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.688,true,"NA"]
["TCGA-BLCA","TCGA-CF-A7I0-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.572,false,"NA"]
["TCGA-BLCA","TCGA-CF-A7I0-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.185,false,0.0127388535032]
["TCGA-BLCA","TCGA-CF-A7I0-01A","12:CPSF6:69262562:+:5:CSNK1A1:149496860:-:fusion","CPSF6--CSNK1A1",1.0,3.0,2.0,0.0,0.763,false,0.0037037037037]
["TCGA-BLCA","TCGA-CF-A8HX-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",2.0,0.0,147.0,0.0,0.413,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HX-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.463,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HX-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.462,true,"NA"]
["TCGA-BLCA","TCGA-CF-A8HX-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",18.0,210.0,4870.0,17.0,0.511573458918149,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HX-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.16,false,0.0164835164835]
["TCGA-BLCA","TCGA-CF-A8HX-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",4.0,0.0,98.0,0.0,0.168,false,0.0164835164835]
["TCGA-BLCA","TCGA-CF-A8HX-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",6.0,0.0,192.0,0.0,0.216,false,0.0139275766017]
["TCGA-BLCA","TCGA-CF-A8HY-01A","12:ATF7:53507856:ATP5G2:53669341:rev:-","ATF7--ATP5G2",2.0,0.0,4.0,0.0,0.503,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","12:FBRSL1:132490861:NOC4L:132150981:rev:+","FBRSL1--NOC4L",1.0,18.0,18.0,8.0,0.869,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",9.0,0.0,1758.0,0.0,0.679,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","16:HSF4:67169941:AC018557.1:66720897:rev:+","HSF4--AC018557.1",11.0,0.0,168.0,0.0,0.557,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.429,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",25.0,0.0,1126.0,0.0,0.717717180851594,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","1:ELF3:202011299:RNPEP:202004354:rev:+","ELF3--RNPEP",1.0,0.0,2.0,0.0,0.978,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",5.0,3449.0,231.0,225.0,0.414,true,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","20:RNF114:49936552:ZFAS1:49289045:rev:+","RNF114--ZFAS1",1.0,3.0,10.0,0.0,0.911,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.742102564381231,true,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.453,false,"NA"]
["TCGA-BLCA","TCGA-CF-A8HY-01A","10:HERC4:67966683:-:10:AL731568.1:75743466:+:strandcross","HERC4--AL731568.1",2.0,0.0,1.0,0.0,0.372,false,0.00242130750605]
["TCGA-BLCA","TCGA-CF-A8HY-01A","17:PGS1:78378808:+:16:KIF22:29804814:+:fusion","PGS1--KIF22",3.0,0.0,80.0,0.0,0.531,false,0.00492610837438]
["TCGA-BLCA","TCGA-CF-A9FF-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.496,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.654,true,"NA"]
["TCGA-BLCA","TCGA-CF-A9FF-01A","4:MANBA:102760718:UBE2D3:102809855:rev:-","MANBA--UBE2D3",1.0,29.0,40.0,10.0,0.927,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FF-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.62052267551066,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","11:CAPN1:65208262:SNX15:65035520:rev:+","CAPN1--SNX15",1.0,0.0,1.0,0.0,0.973,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","15:PPIB:64162041:UBAP1L:65102684:rev:-","PPIB--UBAP1L",1.0,0.0,1.0,0.0,0.966,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.426,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.919,true,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","5:DDX46:134764092:CAMLG:134750759:rev:+","DDX46--CAMLG",1.0,0.0,1.0,0.0,0.911,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.64,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FH-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",5.0,0.0,192.0,0.0,0.331,false,0.0258620689655]
["TCGA-BLCA","TCGA-CF-A9FL-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.428,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FL-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.442,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FL-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",2.0,821.0,85.0,71.0,0.413,false,"NA"]
["TCGA-BLCA","TCGA-CF-A9FL-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.838,true,"NA"]
["TCGA-BLCA","TCGA-CF-A9FL-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.206,false,0.0254777070064]
["TCGA-BLCA","TCGA-CF-A9FL-01A","14:NDRG2:21020292:-:19:AC092069.1:12944487:-:fusion","NDRG2--AC092069.1",5.0,10186.0,5.0,5.0,0.151,true,0.0251256281407]
["TCGA-BLCA","TCGA-CF-A9FM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.566,true,"NA"]
["TCGA-BLCA","TCGA-CF-A9FM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.46,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-01A","17:SLC38A10:81270918:ARL16:81681879:rev:-","SLC38A10--ARL16",1.0,0.0,1.0,0.0,0.937,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-01A","1:TRMT13:100144143:AGL:99921534:rev:+","TRMT13--AGL",1.0,0.0,1.0,0.0,0.969,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.472,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-01A","8:PDE7A:65841371:VCPIP1:66651544:rev:-","PDE7A--VCPIP1",1.0,1.0,2.0,1.0,0.81,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-01A","12:SLC2A13:40028301:-:19:ZNF329:58142661:-:fusion","SLC2A13--ZNF329",1.0,0.0,1.0,0.0,0.784,false,0.0]
["TCGA-BLCA","TCGA-CU-A0YN-01A","19:CNN2:1036677:+:11:NEAT1:65423285:+:fusion","CNN2--NEAT1",4.0,0.0,13.0,0.0,0.356,false,0.018018018018]
["TCGA-BLCA","TCGA-CU-A0YN-01A","1:RPL11:23694791:+:19:PNKP:49863760:-:fusion","RPL11--PNKP",2.0,0.0,1.0,0.0,0.178,false,0.03003003003]
["TCGA-BLCA","TCGA-CU-A0YN-01A","7:COBL:51083058:-:7:SEPT14:55807258:-:rev","COBL--SEPT14",1.0,0.0,1.0,0.0,0.906,false,0.0]
["TCGA-BLCA","TCGA-CU-A0YN-01A","7:SUN1:843520:+:1:AL035409.1:77068084:+:fusion","SUN1--AL035409.1",1.0,0.0,1.0,0.0,0.864,false,0.0]
["TCGA-BLCA","TCGA-CU-A0YN-11A","17:STAT3:42388279:CAVIN1:42405388:rev:-","STAT3--CAVIN1",1.0,10.0,10.0,8.0,0.845,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.917,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-11A","7:LINC01004:105012932:SRPK2:105118022:rev:-","LINC01004--SRPK2",1.0,1.0,6.0,0.0,0.895,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YN-11A","11:MCAM:119311090:-:16:MYH11:15715272:-:fusion","MCAM--MYH11",2.0,0.0,23.0,0.0,0.273,false,0.048951048951]
["TCGA-BLCA","TCGA-CU-A0YN-11A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",1.0,13.0,47.0,11.0,0.844,false,0.00699300699301]
["TCGA-BLCA","TCGA-CU-A0YN-11A","2:DES:219420155:+:1:CSRP1:201507103:-:fusion","DES--CSRP1",2.0,0.0,1.0,0.0,0.184,false,0.0629370629371]
["TCGA-BLCA","TCGA-CU-A0YN-11A","9:TPM2:35685064:-:17:ACTG1:81511626:-:fusion","TPM2--ACTG1",4.0,123.0,93.0,53.0,0.748,true,0.013986013986]
["TCGA-BLCA","TCGA-CU-A0YO-01A","14:IFT43:76022394:TTLL5:75902142:rev:+","IFT43--TTLL5",1.0,0.0,1.0,0.0,0.843,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",3.0,4613.0,511.0,496.0,0.522,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",3.0,8291.0,284.0,283.0,0.466,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.983,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","9:DOLPP1:129086798:PHYHD1:128921482:rev:+","DOLPP1--PHYHD1",1.0,7.0,7.0,1.0,0.908,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","9:TBC1D2:98208668:AL136084.2:98872415:rev:-","TBC1D2--AL136084.2",2.0,0.0,1.0,0.0,0.401,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.515,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YO-01A","12:AC007688.2:12927803:+:12:PTPRR:70892977:-:strandcross","AC007688.2--PTPRR",1.0,0.0,1.0,0.0,0.889,false,0.00529100529101]
["TCGA-BLCA","TCGA-CU-A0YO-01A","1:LUZP1:23091190:-:18:NEDD4L:58252001:+:fusion","LUZP1--NEDD4L",1.0,0.0,1.0,0.0,0.938,false,0.00529100529101]
["TCGA-BLCA","TCGA-CU-A0YO-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.248,false,0.026455026455]
["TCGA-BLCA","TCGA-CU-A0YO-01A","6:PDSS2:107210439:-:6:CRYBG1:106511430:+:strandcross","PDSS2--CRYBG1",3.0,0.0,1.0,0.0,0.704,false,0.010582010582]
["TCGA-BLCA","TCGA-CU-A0YR-01A","1:TNNI3K:74336149:FPGT-TNNI3K:74236102:rev:+","TNNI3K--FPGT-TNNI3K",1.0,1.0,1.0,0.0,0.967,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YR-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.687,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YR-01A","6:RPS18:33272122:PSMB9:32858005:rev:+","RPS18--PSMB9",1.0,0.0,1.0,0.0,0.967,false,"NA"]
["TCGA-BLCA","TCGA-CU-A0YR-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.724,true,"NA"]
["TCGA-BLCA","TCGA-CU-A0YR-11A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",3.0,0.0,91.0,0.0,0.218,false,0.031746031746]
["TCGA-BLCA","TCGA-CU-A0YR-11A","11:RELA:65658718:-:10:NFKB2:102398212:+:fusion","RELA--NFKB2",20.0,10517.0,1.0,1.0,0.164998540987178,true,0.0625]
["TCGA-BLCA","TCGA-CU-A0YR-11A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",4.0,1067.0,394.0,191.0,0.242,true,0.0568181818182]
["TCGA-BLCA","TCGA-CU-A0YR-11A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",4.0,0.0,297.0,0.0,0.205,false,0.0568181818182]
["TCGA-BLCA","TCGA-CU-A0YR-11A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",3.0,0.0,205.0,0.0,0.376,false,0.00793650793651]
["TCGA-BLCA","TCGA-CU-A0YR-11A","15:PKM:72209673:-:15:USP3-AS1:63600739:-:reg","PKM--USP3-AS1",2.0,0.0,1.0,0.0,0.291,false,0.0568181818182]
["TCGA-BLCA","TCGA-CU-A0YR-11A","16:AC007496.2:53981650:-:2:ACTG2:73913485:+:fusion","AC007496.2--ACTG2",8.0,1056.0,2.0,2.0,0.261,true,0.0568181818182]
["TCGA-BLCA","TCGA-CU-A0YR-11A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.712,false,0.0227272727273]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.673,true,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","13:WDFY2:51584824:INTS6-AS1:51512189:rev:+","WDFY2--INTS6-AS1",1.0,65.0,50.0,10.0,0.932,true,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",10.0,0.0,1758.0,0.0,0.669,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","16:CYB5B:69424857:VPS4A:69316008:rev:+","CYB5B--VPS4A",1.0,0.0,1.0,0.0,0.932,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","18:ZNF532:58865579:MALT1:58696366:rev:+","ZNF532--MALT1",1.0,1.0,1.0,0.0,0.86,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","1:SZT2:43410321:C1orf50:42773563:rev:+","SZT2--C1orf50",2.0,741.0,22.0,22.0,0.645,true,"NA"]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","11:AC132217.1:2129121:-:6:HIVEP1:12161439:+:fusion","AC132217.1--HIVEP1",2.0,0.0,1.0,0.0,0.226,false,0.0192616372392]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","12:KRT5:52517181:-:1:JTB:153977013:-:fusion","KRT5--JTB",2.0,0.0,15.0,0.0,0.528,false,0.0112359550562]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","16:ALDOA:30067366:+:22:MYH9:36284511:-:fusion","ALDOA--MYH9",2.0,0.0,2.0,0.0,0.369,false,0.016051364366]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","17:KRT16:41611069:-:20:PSMF1:1166227:+:fusion","KRT16--PSMF1",3.0,0.0,1.0,0.0,0.255,false,0.0192616372392]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","1:SHC1:154967980:-:X:PLXNA3:154471105:+:fusion","SHC1--PLXNA3",2.0,0.0,1.0,0.0,0.265,false,0.0192616372392]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","21:CXADR:17565611:+:16:CHMP1A:89647331:-:fusion","CXADR--CHMP1A",2.0,5.0,1.0,0.0,0.404,false,0.0144462279294]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","2:ZFP36L2:43226265:-:17:KRT17:41621091:-:fusion","ZFP36L2--KRT17",1.0,3.0,1.0,0.0,0.837,false,0.00802568218299]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","3:EIF4A2:186787584:+:20:NECAB3:33660395:-:fusion","EIF4A2--NECAB3",1.0,0.0,1.0,0.0,0.915,false,0.00642054574639]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","3:PFN2:149965713:-:16:DHX38:72108630:+:fusion","PFN2--DHX38",15.0,0.0,1.0,0.0,0.163,false,0.0192616372392]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","8:AC009902.2:81280595:-:1:S100A8:153390557:-:fusion","AC009902.2--S100A8",1.0,7.0,9.0,4.0,0.736,false,0.00802568218299]
["TCGA-BLCA","TCGA-CU-A3KJ-01A","8:CTSB:11853329:-:20:CEBPB-AS1:50191498:-:fusion","CTSB--CEBPB-AS1",2.0,0.0,2.0,0.0,0.321,false,0.0176565008026]
["TCGA-BLCA","TCGA-CU-A3QU-01A","11:GDPD5:75477619:MAP6:75608322:rev:-","GDPD5--MAP6",1.0,0.0,1.0,0.0,0.903,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.423,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","16:AC092143.3:89970931:CPNE7:89595367:rev:+","AC092143.3--CPNE7",1.0,345.0,99.0,49.0,0.863,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","20:ITCH:34369470:CHMP4B:33848467:rev:+","ITCH--CHMP4B",1.0,0.0,1.0,0.0,0.847,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","3:UBE2E1:23811510:UBE2E2:23589734:rev:+","UBE2E1--UBE2E2",1.0,2.0,7.0,0.0,0.86,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.405,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3QU-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.299,false,0.017316017316]
["TCGA-BLCA","TCGA-CU-A3QU-01A","11:OTUB1:63997768:+:7:ACTB:5528719:-:fusion","OTUB1--ACTB",5.0,0.0,2.0,0.0,0.235,false,0.0177383592018]
["TCGA-BLCA","TCGA-CU-A3QU-01A","12:NTN4:95665810:-:5:C1QTNF3-AMACR:34005899:-:fusion","NTN4--C1QTNF3-AMACR",1.0,0.0,1.0,0.0,0.921,false,0.0]
["TCGA-BLCA","TCGA-CU-A3QU-01A","12:TMED2:123590449:+:7:CLDN4:73828600:+:fusion","TMED2--CLDN4",2.0,162.0,2.0,0.0,0.578,false,0.00443458980044]
["TCGA-BLCA","TCGA-CU-A3QU-01A","19:CYP4F8:15629225:+:17:RPL23:38853105:-:fusion","CYP4F8--RPL23",1.0,0.0,1.0,0.0,0.697,false,0.00443458980044]
["TCGA-BLCA","TCGA-CU-A3QU-01A","19:EEF2:3979808:-:11:HSPA8:123059448:-:fusion","EEF2--HSPA8",2.0,0.0,4.0,0.0,0.357,false,0.00665188470067]
["TCGA-BLCA","TCGA-CU-A3QU-01A","19:RAD23A:12948009:+:6:BRD2:32976413:+:fusion","RAD23A--BRD2",2.0,0.0,1.0,0.0,0.357,false,0.00665188470067]
["TCGA-BLCA","TCGA-CU-A3QU-01A","19:RPL28:55388048:+:20:GNRH2:3044703:+:fusion","RPL28--GNRH2",2.0,0.0,1.0,0.0,0.233,false,0.0177383592018]
["TCGA-BLCA","TCGA-CU-A3QU-01A","3:GATA2-AS1:128490069:+:5:C1QTNF3-AMACR:34005899:-:fusion","GATA2-AS1--C1QTNF3-AMACR",1.0,1.0,3.0,1.0,0.674,false,0.00443458980044]
["TCGA-BLCA","TCGA-CU-A3QU-01A","6:HLA-C:31269339:-:11:TPP1:6615760:-:fusion","HLA-C--TPP1",2.0,0.0,1.0,0.0,0.536,false,0.00443458980044]
["TCGA-BLCA","TCGA-CU-A3YL-01A","12:RNF10:120546601:COX6A1:120440454:rev:+","RNF10--COX6A1",1.0,0.0,1.0,0.0,0.835,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","17:AFMID:78187433:SEPT9:77488727:rev:+","AFMID--SEPT9",1.0,0.0,1.0,0.0,0.832,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","1:EPB41:28993542:YTHDF2:28768929:rev:+","EPB41--YTHDF2",1.0,0.0,2.0,0.0,0.844,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.98,true,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","2:COBLL1:164743687:SLC38A11:164939556:rev:-","COBLL1--SLC38A11",1.0,0.0,2.0,0.0,0.874,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","3:MFSD1:158814067:RSRC1:158460935:rev:+","MFSD1--RSRC1",1.0,0.0,1.0,0.0,0.859,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.479,false,"NA"]
["TCGA-BLCA","TCGA-CU-A3YL-01A","10:ADIRF:86970530:+:7:ARF5:127590066:+:fusion","ADIRF--ARF5",2.0,0.0,1.0,0.0,0.172,false,0.0185185185185]
["TCGA-BLCA","TCGA-CU-A3YL-01A","2:SDC1:20200797:-:19:DNM2:10829112:+:fusion","SDC1--DNM2",3.0,0.0,1.0,0.0,0.393,false,0.0148148148148]
["TCGA-BLCA","TCGA-CU-A5W6-01A","12:GCN1:120183569:RPLP0:120197462:rev:-","GCN1--RPLP0",1.0,1.0,4.0,1.0,0.876,false,"NA"]
["TCGA-BLCA","TCGA-CU-A5W6-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",18.0,0.0,1126.0,0.0,0.507155789782241,false,"NA"]
["TCGA-BLCA","TCGA-CU-A5W6-01A","19:OPA3:45584623:EML2:45626839:rev:-","OPA3--EML2",2.0,0.0,1.0,0.0,0.593,false,"NA"]
["TCGA-BLCA","TCGA-CU-A5W6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.987,true,"NA"]
["TCGA-BLCA","TCGA-CU-A5W6-01A","7:FMC1:139344990:TRIM24:138504290:rev:+","FMC1--TRIM24",3.0,19.0,7.0,0.0,0.524,false,"NA"]
["TCGA-BLCA","TCGA-CU-A5W6-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",27.0,1558.0,165.0,160.0,0.820125461388907,true,0.002457002457]
["TCGA-BLCA","TCGA-CU-A5W6-01A","13:TGDS:94596051:-:3:ABCC5:183927443:-:fusion","TGDS--ABCC5",2.0,0.0,1.0,0.0,0.334,false,0.014742014742]
["TCGA-BLCA","TCGA-CU-A5W6-01A","4:MRFAP1:6641258:+:17:UBB:16380799:+:fusion","MRFAP1--UBB",7.0,0.0,122.0,0.0,0.161,false,0.019656019656]
["TCGA-BLCA","TCGA-CU-A5W6-01A","6:POU5F1:31166534:-:16:FUS:31183858:+:fusion","POU5F1--FUS",3.0,43.0,2.0,1.0,0.809,false,0.0]
["TCGA-BLCA","TCGA-CU-A72E-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.979,true,"NA"]
["TCGA-BLCA","TCGA-CU-A72E-01A","19:UBA2:34428570:GPI:34393248:rev:+","UBA2--GPI",1.0,0.0,1.0,0.0,0.879,false,"NA"]
["TCGA-BLCA","TCGA-CU-A72E-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.603,false,"NA"]
["TCGA-BLCA","TCGA-CU-A72E-01A","12:KRT5:52517107:-:3:ACY1:51986210:+:fusion","KRT5--ACY1",2.0,0.0,6.0,0.0,0.256,false,0.0214797136038]
["TCGA-BLCA","TCGA-CU-A72E-01A","17:KRT13:41502374:-:17:OXLD1:81666578:-:rev","KRT13--OXLD1",2.0,0.0,1.0,0.0,0.502,false,0.00954653937947]
["TCGA-BLCA","TCGA-CU-A72E-01A","19:CALM3:46608588:+:19:KXD1:18558827:+:rev","CALM3--KXD1",2.0,0.0,1.0,0.0,0.318,false,0.0190930787589]
["TCGA-BLCA","TCGA-DK-A1A3-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",4.0,5022.0,244.0,241.0,0.54,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A3-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.912,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A3-01A","4:LRBA:150893052:SH3D19:151226086:rev:-","LRBA--SH3D19",2.0,0.0,1.0,0.0,0.543,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A3-01A","9:TJP2:69151771:FXN:69046385:rev:+","TJP2--FXN",1.0,3.0,6.0,2.0,0.804,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A3-01A","16:ZNF423:49855735:-:6:SESN1:109002343:-:fusion","ZNF423--SESN1",2.0,0.0,1.0,0.0,0.707,false,0.0121951219512]
["TCGA-BLCA","TCGA-DK-A1A5-01A","10:FAM213A:80427496:TMEM254:80081841:rev:+","FAM213A--TMEM254",2.0,0.0,1.0,0.0,0.441,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:DNAJC7:41976479:AARSD1:42955456:rev:-","DNAJC7--AARSD1",1.0,5861.0,13.0,12.0,0.853,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","22:UPK3A:45293313:ARHGAP8:44845269:rev:+","UPK3A--ARHGAP8",1.0,0.0,1.0,0.0,0.969,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.645,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","6:WDR27:169701551:PSMB1:170549113:rev:-","WDR27--PSMB1",1.0,3.0,6.0,2.0,0.812,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","8:SNX31:100608494:PABPC1:100717888:rev:-","SNX31--PABPC1",1.0,0.0,1.0,0.0,0.897,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.514,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A5-01A","10:PLAU:73913098:+:10:C10orf55:73913075:-:strandcross","PLAU--C10orf55",3.0,90.0,10.0,8.0,0.517,false,0.00378787878788]
["TCGA-BLCA","TCGA-DK-A1A5-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",1.0,1067.0,394.0,191.0,0.915,false,0.00215517241379]
["TCGA-BLCA","TCGA-DK-A1A5-01A","15:B2M:44717791:+:7:COL1A2:94413690:+:fusion","B2M--COL1A2",4.0,0.0,1.0,0.0,0.177,false,0.0258620689655]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:COL1A1:50186317:-:10:HNRNPH3:68341174:+:fusion","COL1A1--HNRNPH3",2.0,0.0,2.0,0.0,0.207,false,0.0237068965517]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:17:JUP:41755432:-:strandcross","ERBB2--JUP",4.0,56.0,33.0,26.0,0.301,true,0.0150862068966]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:19:EPN1:55678527:+:fusion","ERBB2--EPN1",1.0,0.0,1.0,0.0,0.755,false,0.00646551724138]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:ERBB2:39715939:+:19:SHKBP1:40590730:+:fusion","ERBB2--SHKBP1",2.0,7.0,2.0,1.0,0.803,true,0.00215517241379]
["TCGA-BLCA","TCGA-DK-A1A5-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",9.0,0.0,260.0,0.0,0.174,false,0.0151515151515]
["TCGA-BLCA","TCGA-DK-A1A5-01A","2:TMSB10:84906117:+:16:TSNAXIP1:67827753:+:fusion","TMSB10--TSNAXIP1",6.0,0.0,9.0,0.0,0.192,false,0.0237068965517]
["TCGA-BLCA","TCGA-DK-A1A5-01A","4:DANCR:52712959:+:17:SEPT9:77487424:+:fusion","DANCR--SEPT9",1.0,4.0,1.0,0.0,0.968,false,0.00215517241379]
["TCGA-BLCA","TCGA-DK-A1A5-01A","5:RACK1:181236945:-:1:ECHDC2:52921774:-:fusion","RACK1--ECHDC2",13.0,0.0,1.0,0.0,0.221,false,0.0215517241379]
["TCGA-BLCA","TCGA-DK-A1A5-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",5.0,4574.0,830.0,638.0,0.26,true,0.0193965517241]
["TCGA-BLCA","TCGA-DK-A1A5-01A","7:ACTB:5528470:-:17:RPL26:8383167:-:fusion","ACTB--RPL26",2.0,0.0,36.0,0.0,0.409,false,0.0150862068966]
["TCGA-BLCA","TCGA-DK-A1A6-01A","17:NFE2L1:48057502:KPNB1:47664159:rev:+","NFE2L1--KPNB1",2.0,0.0,1.0,0.0,0.486,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","1:FABP3:31372942:ADGRB2:31756815:rev:-","FABP3--ADGRB2",1.0,0.0,1.0,0.0,0.996,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",15.0,9462.0,7336.0,7317.0,0.896,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","4:CCSER1:90468354:MMRN1:89894724:rev:+","CCSER1--MMRN1",1.0,0.0,1.0,0.0,0.886,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","6:SRSF3:36598983:BRPF3:36207313:rev:+","SRSF3--BRPF3",1.0,0.0,1.0,0.0,0.99,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",1.0,298.0,112.0,87.0,0.938,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A6-01A","10:ADIRF:86968605:+:11:CCND1:69651118:+:fusion","ADIRF--CCND1",1.0,0.0,1.0,0.0,0.809,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","10:STK32C:132307572:-:10:PWWP2B:132417061:+:strandcross","STK32C--PWWP2B",1.0,2.0,1.0,0.0,0.715,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","10:TSPAN15:69507669:+:22:AL021707.3:38734730:+:fusion","TSPAN15--AL021707.3",6.0,989.0,1.0,1.0,0.232,true,0.0105633802817]
["TCGA-BLCA","TCGA-DK-A1A6-01A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",3.0,0.0,91.0,0.0,0.258,false,0.00485436893204]
["TCGA-BLCA","TCGA-DK-A1A6-01A","11:SHANK2:71056481:-:8:MATN2:98021205:+:fusion","SHANK2--MATN2",2.0,0.0,1.0,0.0,0.692,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","17:ARHGAP44:12958897:+:17:FNDC8:35127042:+:reg","ARHGAP44--FNDC8",1.0,0.0,1.0,0.0,0.838,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","17:LRRC75A-AS1:16439414:+:1:SERINC2:31432967:+:fusion","LRRC75A-AS1--SERINC2",2.0,10.0,2.0,2.0,0.991,true,0.0]
["TCGA-BLCA","TCGA-DK-A1A6-01A","19:PPP1R12C:55098784:-:1:SERINC2:31432967:+:fusion","PPP1R12C--SERINC2",1.0,6.0,1.0,0.0,0.623,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","19:RPL28:55388048:+:12:GLTP:109852737:-:fusion","RPL28--GLTP",3.0,0.0,1.0,0.0,0.223,false,0.0105633802817]
["TCGA-BLCA","TCGA-DK-A1A6-01A","19:RPL36:5691453:+:8:LY6D:142785761:-:fusion","RPL36--LY6D",3.0,0.0,3.0,0.0,0.154,false,0.0105633802817]
["TCGA-BLCA","TCGA-DK-A1A6-01A","3:GATA2:128488352:-:1:SERINC2:31432967:+:fusion","GATA2--SERINC2",2.0,0.0,1.0,0.0,0.475,false,0.00704225352113]
["TCGA-BLCA","TCGA-DK-A1A6-01A","3:RNF7:141746119:+:12:PYM1:55914366:-:fusion","RNF7--PYM1",5.0,7155.0,30.0,29.0,0.174,true,0.0105633802817]
["TCGA-BLCA","TCGA-DK-A1A6-01A","4:MFSD10:2933106:-:19:TRIM28:58548294:+:fusion","MFSD10--TRIM28",1.0,0.0,1.0,0.0,0.769,false,0.00352112676056]
["TCGA-BLCA","TCGA-DK-A1A6-01A","6:HLA-E:30489595:+:6:HLA-B:31356957:-:strandcross","HLA-E--HLA-B",4.0,10194.0,137.0,137.0,0.274,true,0.00485436893204]
["TCGA-BLCA","TCGA-DK-A1A7-01A","12:SENP1:48106028:KANSL2:48655060:rev:-","SENP1--KANSL2",1.0,0.0,1.0,0.0,0.876,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.424,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",7.0,2722.0,255.0,144.0,0.567,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","1:PYGO2:154957026:GON4L:155784389:rev:-","PYGO2--GON4L",2.0,4067.0,204.0,203.0,0.413,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.937,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","4:TSPAN5:98658146:EIF4E:98901982:rev:-","TSPAN5--EIF4E",1.0,6.0,9.0,0.0,0.894,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.5,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1A7-01A","10:AL136982.7:86970237:-:3:EIF4G1:184325299:+:fusion","AL136982.7--EIF4G1",2.0,0.0,1.0,0.0,0.386,false,0.00913242009132]
["TCGA-BLCA","TCGA-DK-A1A7-01A","12:COX6A1:120438810:+:22:AL021707.5:38734725:+:fusion","COX6A1--AL021707.5",6.0,908.0,2.0,2.0,0.282,true,0.00913242009132]
["TCGA-BLCA","TCGA-DK-A1A7-01A","22:LARGE1:33761371:-:22:SYN3:32629868:-:reg","LARGE1--SYN3",1.0,0.0,1.0,0.0,0.664,false,0.00456621004566]
["TCGA-BLCA","TCGA-DK-A1AA-01A","13:MRPS31:40749138:ELF1:40982282:rev:-","MRPS31--ELF1",1.0,1.0,3.0,1.0,0.879,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AA-01A","17:MRPS23:57849240:MKS1:58208174:rev:-","MRPS23--MKS1",1.0,0.0,1.0,0.0,0.886,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",18.0,9462.0,7336.0,7317.0,0.867358598098435,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AA-01A","6:HLA-DRB5:32521905:HLA-DRB1:32581838:rev:-","HLA-DRB5--HLA-DRB1",3.0,7067.0,17.0,17.0,0.771,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AA-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.443,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AA-01A","12:UBC:124913321:-:11:SERPING1:57611717:+:fusion","UBC--SERPING1",2.0,0.0,1.0,0.0,0.347,false,0.00815217391304]
["TCGA-BLCA","TCGA-DK-A1AA-01A","17:ERBB2:39715939:+:17:JUP:41755432:-:strandcross","ERBB2--JUP",1.0,56.0,33.0,26.0,0.948,false,0.00271739130435]
["TCGA-BLCA","TCGA-DK-A1AA-01A","17:KRT19:41523617:-:19:NR2C2AP:19202844:-:fusion","KRT19--NR2C2AP",3.0,0.0,8.0,0.0,0.224,false,0.0108695652174]
["TCGA-BLCA","TCGA-DK-A1AB-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",28.0,669.0,283.0,225.0,0.767831762193531,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","12:GCN1:120194680:RPLP0:120197462:rev:-","GCN1--RPLP0",2.0,1.0,4.0,0.0,0.45,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.828,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","6:HLA-E:30492583:HLA-A:29945451:rev:+","HLA-E--HLA-A",3.0,9531.0,39.0,39.0,0.465,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","9:GSN:121248323:CNTRL:121161856:rev:+","GSN--CNTRL",2.0,342.0,18.0,6.0,0.45,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.574,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AB-01A","10:DDIT4:72274950:+:7:COL1A2:94428293:+:fusion","DDIT4--COL1A2",2.0,0.0,1.0,0.0,0.156,false,0.0405727923628]
["TCGA-BLCA","TCGA-DK-A1AB-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",20.0,1558.0,165.0,160.0,0.274828770401226,true,0.0262529832936]
["TCGA-BLCA","TCGA-DK-A1AB-01A","12:KRT5:52519742:-:22:TYMP:50528610:-:fusion","KRT5--TYMP",1.0,0.0,1.0,0.0,0.71,false,0.00715990453461]
["TCGA-BLCA","TCGA-DK-A1AB-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",3.0,187.0,145.0,16.0,0.16,false,0.0405727923628]
["TCGA-BLCA","TCGA-DK-A1AB-01A","22:KLHDC7B:50551023:+:19:FXYD3:35121222:+:fusion","KLHDC7B--FXYD3",4.0,0.0,1.0,0.0,0.159,false,0.0405727923628]
["TCGA-BLCA","TCGA-DK-A1AB-01A","2:EML4:42169636:+:3:DNAJB11:186581371:+:fusion","EML4--DNAJB11",2.0,0.0,1.0,0.0,0.595,false,0.00954653937947]
["TCGA-BLCA","TCGA-DK-A1AB-01A","2:PTMA:231712516:+:12:ABCB9:122981649:-:fusion","PTMA--ABCB9",3.0,2626.0,1.0,0.0,0.162,false,0.0405727923628]
["TCGA-BLCA","TCGA-DK-A1AB-01A","3:ABHD6:58294732:+:3:KLHL24:183664101:+:reg","ABHD6--KLHL24",3.0,0.0,1.0,0.0,0.162,false,0.0196078431373]
["TCGA-BLCA","TCGA-DK-A1AB-01A","5:SLC12A7:1073633:-:15:B2M:44715546:+:fusion","SLC12A7--B2M",2.0,0.0,1.0,0.0,0.512,false,0.0119331742243]
["TCGA-BLCA","TCGA-DK-A1AB-01A","7:POLD2:44114681:-:1:SH3BGRL3:26281058:+:fusion","POLD2--SH3BGRL3",4.0,0.0,4.0,0.0,0.791,false,0.00715990453461]
["TCGA-BLCA","TCGA-DK-A1AB-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",7.0,2324.0,521.0,517.0,0.367,true,0.0117647058824]
["TCGA-BLCA","TCGA-DK-A1AC-01A","10:KIF1BP:68995278:CCAR1:68771206:rev:+","KIF1BP--CCAR1",2.0,216.0,7.0,6.0,0.567,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.84,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","19:ZNF551:57685385:ZNF530:57612503:rev:+","ZNF551--ZNF530",1.0,2.0,4.0,0.0,0.955,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","22:AP1B1:29388424:ZMAT5:29742480:rev:-","AP1B1--ZMAT5",1.0,0.0,1.0,0.0,0.801,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","22:PISD:31648101:RTCB:32408833:rev:-","PISD--RTCB",2.0,0.0,1.0,0.0,0.706,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",22.0,9462.0,7336.0,7317.0,0.893693928913527,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","6:REV3L:111482750:FYN:111674630:rev:-","REV3L--FYN",1.0,2.0,15.0,2.0,0.926,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",1.0,298.0,112.0,87.0,0.807,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.418,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AC-01A","11:TPCN2:69088366:+:17:MYO1D:32605241:-:fusion","TPCN2--MYO1D",1.0,0.0,1.0,0.0,0.65,false,0.00879765395894]
["TCGA-BLCA","TCGA-DK-A1AC-01A","11:TRAPPC4:119019210:+:11:SERPING1:57602035:+:rev","TRAPPC4--SERPING1",2.0,0.0,4.0,0.0,0.263,false,0.0205278592375]
["TCGA-BLCA","TCGA-DK-A1AC-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",3.0,187.0,145.0,16.0,0.217,false,0.0234604105572]
["TCGA-BLCA","TCGA-DK-A1AC-01A","21:SCAF4:31685049:-:16:CHMP1A:89647331:-:fusion","SCAF4--CHMP1A",1.0,27.0,10.0,1.0,0.642,false,0.00879765395894]
["TCGA-BLCA","TCGA-DK-A1AC-01A","2:IGKC:88857161:-:6:PKIB:122610232:+:fusion","IGKC--PKIB",2.0,0.0,1.0,0.0,0.217,false,0.0234604105572]
["TCGA-BLCA","TCGA-DK-A1AC-01A","8:PCMTD1:51845661:-:10:BAMBI:28681258:+:fusion","PCMTD1--BAMBI",1.0,0.0,1.0,0.0,0.692,false,0.00879765395894]
["TCGA-BLCA","TCGA-DK-A1AC-01A","8:RPL30:98044943:-:20:PIGT:45425574:+:fusion","RPL30--PIGT",2.0,0.0,1.0,0.0,0.355,false,0.0175953079179]
["TCGA-BLCA","TCGA-DK-A1AD-01A","11:ZNF202:123724780:SIAE:124673881:rev:-","ZNF202--SIAE",2.0,491.0,38.0,32.0,0.418,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","13:PCCA:100273346:UBAC2:99385228:rev:+","PCCA--UBAC2",1.0,0.0,1.0,0.0,0.932,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.44,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.898,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",2.0,442.0,88.0,47.0,0.98,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",5.0,0.0,182.0,0.0,0.482,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","4:AFF1:86948571:PTPN13:86716530:rev:+","AFF1--PTPN13",3.0,0.0,1.0,0.0,0.435,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","9:GSN:121248323:CNTRL:121161856:rev:+","GSN--CNTRL",2.0,342.0,18.0,6.0,0.475,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.655,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AD-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",31.0,1558.0,165.0,160.0,0.527745940824154,true,0.0102301790281]
["TCGA-BLCA","TCGA-DK-A1AD-01A","12:PCBP2:53479683:+:21:SOD1:31659693:+:fusion","PCBP2--SOD1",2.0,0.0,1.0,0.0,0.51,false,0.0102301790281]
["TCGA-BLCA","TCGA-DK-A1AD-01A","19:SCGB2B2:34675630:-:19:ERCC1:45423381:-:rev","SCGB2B2--ERCC1",1.0,0.0,1.0,0.0,0.821,false,0.00255754475703]
["TCGA-BLCA","TCGA-DK-A1AD-01A","1:DEDD:161122025:-:17:AC019349.1:41500983:+:fusion","DEDD--AC019349.1",3.0,799.0,5.0,5.0,0.556,true,0.0102301790281]
["TCGA-BLCA","TCGA-DK-A1AD-01A","1:KLHDC9:161099062:+:19:URI1:29985223:+:fusion","KLHDC9--URI1",1.0,0.0,1.0,0.0,0.717,false,0.00255754475703]
["TCGA-BLCA","TCGA-DK-A1AD-01A","3:RAD18:8912312:-:22:TBC1D22A:46878653:+:fusion","RAD18--TBC1D22A",2.0,0.0,1.0,0.0,0.625,false,0.0076726342711]
["TCGA-BLCA","TCGA-DK-A1AD-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",1.0,4574.0,830.0,638.0,0.712,true,0.00255754475703]
["TCGA-BLCA","TCGA-DK-A1AD-01A","8:RPL30:98044943:-:3:QARS:49100102:-:fusion","RPL30--QARS",3.0,0.0,1.0,0.0,0.339,false,0.0179028132992]
["TCGA-BLCA","TCGA-DK-A1AD-01A","9:SPTAN1:128599495:+:17:RPL38:74203693:+:fusion","SPTAN1--RPL38",2.0,2614.0,20.0,16.0,0.51,true,0.0102301790281]
["TCGA-BLCA","TCGA-DK-A1AE-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",2.0,0.0,495.0,0.0,0.409,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","19:ZNF584:58401662:RPS5:58394497:rev:+","ZNF584--RPS5",1.0,2.0,5.0,0.0,0.946,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",2.0,397.0,152.0,123.0,0.526,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","1:S100A6:153535949:S100A4:153544809:rev:-","S100A6--S100A4",1.0,4.0,7.0,0.0,0.899,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",21.0,9462.0,7336.0,7317.0,0.828751998609498,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","5:MAML1:179733427:CANX:179705679:rev:+","MAML1--CANX",1.0,0.0,4.0,0.0,0.862,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.607,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AE-01A","14:HAUS4:22955100:-:14:MRPL52:22834172:+:strandcross","HAUS4--MRPL52",1.0,2.0,2.0,0.0,0.723,false,0.00446428571429]
["TCGA-BLCA","TCGA-DK-A1AE-01A","8:CLU:27599780:-:6:TUBB:30722918:+:fusion","CLU--TUBB",2.0,0.0,2.0,0.0,0.216,false,0.015625]
["TCGA-BLCA","TCGA-DK-A1AE-01A","8:PLAT:42175747:-:8:EXTL3:28752661:+:strandcross","PLAT--EXTL3",2.0,0.0,1.0,0.0,0.236,false,0.0111607142857]
["TCGA-BLCA","TCGA-DK-A1AF-01A","10:ARHGAP19:97264826:MMS19:97466901:rev:-","ARHGAP19--MMS19",1.0,0.0,1.0,0.0,0.94,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","16:KCTD5:2682800:AC141586.1:2610462:rev:+","KCTD5--AC141586.1",2.0,126.0,62.0,54.0,0.826,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","17:RECQL5:75638978:UNC13D:75841001:rev:-","RECQL5--UNC13D",1.0,0.0,1.0,0.0,0.897,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.405,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.498,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","1:RPS6KC1:213051509:ATF3:212615018:rev:+","RPS6KC1--ATF3",1.0,0.0,1.0,0.0,0.897,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","22:PRR34-AS1:46053920:ATXN10:45689712:rev:+","PRR34-AS1--ATXN10",1.0,1.0,3.0,1.0,0.822,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.708,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AF-01A","10:PSAP:71816298:-:2:COL3A1:189008035:+:fusion","PSAP--COL3A1",4.0,0.0,1.0,0.0,0.155,false,0.0348101265823]
["TCGA-BLCA","TCGA-DK-A1AF-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",12.0,7942.0,781.0,771.0,0.465,true,0.0189873417722]
["TCGA-BLCA","TCGA-DK-A1AF-01A","12:COX6A1:120438810:+:17:AC019349.1:41500983:+:fusion","COX6A1--AC019349.1",3.0,799.0,1.0,1.0,0.184,true,0.0284810126582]
["TCGA-BLCA","TCGA-DK-A1AF-01A","1:HMGCS2:119755427:-:20:ZFAS1:49289045:+:fusion","HMGCS2--ZFAS1",2.0,0.0,1.0,0.0,0.442,false,0.0189873417722]
["TCGA-BLCA","TCGA-DK-A1AF-01A","7:PRSS2:142773431:+:11:CTSD:1753880:-:fusion","PRSS2--CTSD",2.0,0.0,1.0,0.0,0.17,false,0.0316455696203]
["TCGA-BLCA","TCGA-DK-A1AG-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.487,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.972,true,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","2:TET3:74003166:STAMBP:73844813:rev:+","TET3--STAMBP",1.0,0.0,2.0,0.0,0.859,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","7:TTYH3:2632278:LFNG:2524695:rev:+","TTYH3--LFNG",1.0,0.0,1.0,0.0,0.967,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","9:ABL1:130714455:EXOSC2:130703053:rev:+","ABL1--EXOSC2",1.0,0.0,1.0,0.0,0.88,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.455,false,"NA"]
["TCGA-BLCA","TCGA-DK-A1AG-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",3.0,0.0,205.0,0.0,0.434,false,0.0]
["TCGA-BLCA","TCGA-DK-A1AG-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",2.0,187.0,145.0,16.0,0.189,false,0.0129449838188]
["TCGA-BLCA","TCGA-DK-A1AG-01A","17:JUP:41767458:-:19:BCAM:44820705:+:fusion","JUP--BCAM",2.0,0.0,1.0,0.0,0.374,false,0.00970873786408]
["TCGA-BLCA","TCGA-DK-A1AG-01A","19:ISYNA1:18436032:-:7:ACTB:5527891:-:fusion","ISYNA1--ACTB",2.0,0.0,1.0,0.0,0.282,false,0.0129449838188]
["TCGA-BLCA","TCGA-DK-A1AG-01A","19:PPP1R12C:55098784:-:19:ZNF787:56103227:-:rev","PPP1R12C--ZNF787",2.0,14.0,8.0,0.0,0.545,false,0.00970873786408]
["TCGA-BLCA","TCGA-DK-A1AG-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",5.0,4574.0,830.0,638.0,0.313,false,0.0129449838188]
["TCGA-BLCA","TCGA-DK-A2HX-01A","18:TMEM241:23421367:AC090772.3:24159828:rev:-","TMEM241--AC090772.3",1.0,0.0,1.0,0.0,0.833,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2HX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,1.0,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2HX-01A","3:FAM157A:198210368:FYTTD1:197770132:rev:+","FAM157A--FYTTD1",2.0,108.0,36.0,11.0,0.552,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2HX-01A","10:TAF3:7824560:+:10:AL713851.1:2566529:+:rev","TAF3--AL713851.1",1.0,0.0,1.0,0.0,0.798,false,0.00887573964497]
["TCGA-BLCA","TCGA-DK-A2HX-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",5.0,0.0,297.0,0.0,0.179,false,0.0236686390533]
["TCGA-BLCA","TCGA-DK-A2HX-01A","19:CEACAM5:41729798:+:16:EARS2:23550842:-:fusion","CEACAM5--EARS2",2.0,109.0,8.0,0.0,0.571,false,0.0147928994083]
["TCGA-BLCA","TCGA-DK-A2HX-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",19.0,0.0,225.0,0.0,0.304269831990517,false,0.0177514792899]
["TCGA-BLCA","TCGA-DK-A2HX-01A","3:RNF7:141746119:+:12:PYM1:55914366:-:fusion","RNF7--PYM1",4.0,7155.0,30.0,29.0,0.862,true,0.00591715976331]
["TCGA-BLCA","TCGA-DK-A2HX-01A","4:MRFAP1:6641258:+:16:ANKRD11:89288678:-:fusion","MRFAP1--ANKRD11",17.0,0.0,3.0,0.0,0.283397934003802,false,0.0177514792899]
["TCGA-BLCA","TCGA-DK-A2I1-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.425,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","17:IFT20:28330111:PROCA1:28704843:rev:-","IFT20--PROCA1",3.0,2.0,2.0,0.0,0.607,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","17:LRRC75A-AS1:16441738:UBB:16381095:rev:+","LRRC75A-AS1--UBB",3.0,0.0,39.0,0.0,0.43,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.542,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",3.0,0.0,423.0,0.0,0.456,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","19:FBXW9:12688917:HOOK2:12773253:rev:-","FBXW9--HOOK2",2.0,361.0,52.0,41.0,0.454,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","19:SAFB2:5586999:DENND1C:6477588:rev:-","SAFB2--DENND1C",3.0,0.0,13.0,0.0,0.441,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",5.0,3449.0,231.0,225.0,0.637,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","20:UQCC1:35303454:AL035420.2:36088192:rev:-","UQCC1--AL035420.2",4.0,0.0,1.0,0.0,0.518,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",15.0,9462.0,7336.0,7317.0,0.952,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","2:PPP1CB:28752176:BABAM2:28298338:rev:+","PPP1CB--BABAM2",1.0,2.0,7.0,2.0,0.807,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","3:COL7A1:48564073:AC104452.1:49423856:rev:-","COL7A1--AC104452.1",3.0,8.0,51.0,0.0,0.417,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",4.0,97.0,99.0,0.0,0.526,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.615,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",1.0,298.0,112.0,87.0,0.821,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","9:GAPVD1:125287883:RABEPK:125213370:rev:+","GAPVD1--RABEPK",3.0,463.0,7.0,6.0,0.607,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.718,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I1-01A","10:KIAA1217:24381067:+:10:SPAG6:22364853:+:rev","KIAA1217--SPAG6",7.0,0.0,1.0,0.0,0.642,false,0.00442477876106]
["TCGA-BLCA","TCGA-DK-A2I1-01A","10:KIAA1217:24501545:+:10:MALRD1:19387528:+:rev","KIAA1217--MALRD1",1.0,0.0,1.0,0.0,0.728,false,0.00442477876106]
["TCGA-BLCA","TCGA-DK-A2I1-01A","12:LDHB:21638353:-:1:DAP3:155737006:+:fusion","LDHB--DAP3",2.0,0.0,1.0,0.0,0.469,false,0.00663716814159]
["TCGA-BLCA","TCGA-DK-A2I1-01A","16:GFOD2:67685457:-:16:AC009118.1:58383169:-:reg","GFOD2--AC009118.1",1.0,0.0,1.0,0.0,0.782,false,0.00221238938053]
["TCGA-BLCA","TCGA-DK-A2I1-01A","16:LONP2:48303305:+:16:ABCC11:48175417:-:strandcross","LONP2--ABCC11",2.0,0.0,1.0,0.0,0.791,false,0.00221238938053]
["TCGA-BLCA","TCGA-DK-A2I1-01A","16:SNX29:12199683:+:16:LITAF:11556735:-:strandcross","SNX29--LITAF",1.0,0.0,1.0,0.0,0.962,false,0.0]
["TCGA-BLCA","TCGA-DK-A2I1-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",19.0,0.0,225.0,0.0,0.316868096488504,false,0.00884955752212]
["TCGA-BLCA","TCGA-DK-A2I1-01A","7:STAG3:100180895:+:19:AC005523.2:4795559:-:fusion","STAG3--AC005523.2",4.0,3815.0,67.0,65.0,0.404,true,0.00663716814159]
["TCGA-BLCA","TCGA-DK-A2I2-01A","12:ELK3:96259853:METAP2:95504065:rev:+","ELK3--METAP2",1.0,0.0,1.0,0.0,0.98,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","13:USP12:27171592:MTIF3:27445156:rev:-","USP12--MTIF3",1.0,0.0,1.0,0.0,0.95,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",10.0,5703.0,236.0,234.0,0.693,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","2:CFLAR-AS1:201147743:ALS2:201715839:rev:-","CFLAR-AS1--ALS2",2.0,231.0,92.0,27.0,0.642,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.428,true,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","4:USP53:119273708:MYOZ2:119150872:rev:+","USP53--MYOZ2",1.0,0.0,1.0,0.0,0.834,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","6:AL391361.2:160880323:AGPAT4:161166417:rev:-","AL391361.2--AGPAT4",2.0,0.0,3.0,0.0,0.404,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.595,false,"NA"]
["TCGA-BLCA","TCGA-DK-A2I2-01A","1:GAS5:173866528:-:20:SLPI:45252419:-:fusion","GAS5--SLPI",3.0,0.0,1.0,0.0,0.203,false,0.0222222222222]
["TCGA-BLCA","TCGA-DK-A2I2-01A","7:ACTB:5529282:-:11:EHBP1L1:65591800:+:fusion","ACTB--EHBP1L1",2.0,0.0,8.0,0.0,0.238,false,0.0155555555556]
["TCGA-BLCA","TCGA-DK-A2I2-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",4.0,2324.0,521.0,517.0,0.384,true,0.00436681222707]
["TCGA-BLCA","TCGA-DK-A2I4-01A","14:NEDD8-MDP1:24217186:NEDD8:24218215:rev:-","NEDD8-MDP1--NEDD8",2.0,64.0,17.0,4.0,0.442,false,"NA"]
["TCGA-BLCA","TCGA-DK-A3IL-01A","4:NSD2:1892263:+:16:NMRAL1:4469465:-:fusion","NSD2--NMRAL1",7.0,3419.0,11.0,11.0,0.356,true,0.0]
["TCGA-BLCA","TCGA-DK-A3IN-01A","11:CREB3L1:46321409:+:16:USB1:57999546:+:fusion","CREB3L1--USB1",4.0,1.0,1.0,0.0,0.229,false,0.0294117647059]
["TCGA-BLCA","TCGA-DK-A3WW-01A","1:CLK2:155262880:GON4L:155784389:rev:-","CLK2--GON4L",2.0,92.0,19.0,10.0,0.465,false,"NA"]
["TCGA-BLCA","TCGA-DK-A3X1-01A","4:AFF1:86948571:PTPN13:86807560:rev:+","AFF1--PTPN13",1.0,0.0,1.0,0.0,0.934,false,"NA"]
["TCGA-BLCA","TCGA-DK-A6B1-01A","6:SRSF3:36596968:+:11:RPS3:75401640:+:fusion","SRSF3--RPS3",2.0,0.0,1.0,0.0,0.259,false,0.0165631469979]
["TCGA-BLCA","TCGA-DK-A6B6-01A","12:FBRSL1:132548032:NOC4L:132150981:rev:+","FBRSL1--NOC4L",1.0,3.0,10.0,1.0,0.963,false,"NA"]
["TCGA-BLCA","TCGA-DK-AA6R-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",21.0,0.0,225.0,0.0,0.283852668875274,false,0.0330578512397]
["TCGA-BLCA","TCGA-DK-AA77-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.301,true,0.0143884892086]
["TCGA-BLCA","TCGA-E5-A4U1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.88,true,"NA"]
["TCGA-BLCA","TCGA-E7-A519-01A","11:ZNF202:123724780:SIAE:124673881:rev:-","ZNF202--SIAE",2.0,491.0,38.0,32.0,0.425,true,"NA"]
["TCGA-BLCA","TCGA-E7-A541-01A","2:RAB1A:65086855:-:19:RFXANK:19192763:+:fusion","RAB1A--RFXANK",5.0,0.0,1.0,0.0,0.186,false,0.0217917675545]
["TCGA-BLCA","TCGA-E7-A7DV-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",4.0,726.0,603.0,54.0,0.568,false,"NA"]
["TCGA-BLCA","TCGA-E7-A7XN-01A","16:AC092326.1:16659597:NDE1:15694165:rev:+","AC092326.1--NDE1",1.0,710.0,28.0,19.0,0.858,true,"NA"]
["TCGA-BLCA","TCGA-FD-A3B3-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.456,false,"NA"]
["TCGA-BLCA","TCGA-FD-A3B5-01A","8:CNBD1:87353786:+:18:PTPN2:12785844:-:fusion","CNBD1--PTPN2",5.0,0.0,1.0,0.0,0.316,false,0.016632016632]
["TCGA-BLCA","TCGA-FD-A3NA-01A","7:ACTB:5528470:-:17:STARD3:39660286:+:fusion","ACTB--STARD3",3.0,0.0,8.0,0.0,0.514,false,0.00626959247649]
["TCGA-BLCA","TCGA-FD-A3SM-01A","1:S100A16:153607999:-:19:AC011498.1:4496919:+:fusion","S100A16--AC011498.1",1.0,2059.0,3.0,2.0,0.796,true,0.0]
["TCGA-BLCA","TCGA-FD-A3SN-01A","X:CD99:2726373:+:12:PCBP2:53454785:+:fusion","CD99--PCBP2",3.0,0.0,1.0,0.0,0.221,false,0.0258215962441]
["TCGA-BLCA","TCGA-FD-A3SR-01A","19:ZNF585A:37155865:-:19:ERCC1:45416897:-:rev","ZNF585A--ERCC1",2.0,0.0,1.0,0.0,0.191,false,0.01108033241]
["TCGA-BLCA","TCGA-FD-A43U-01A","14:EAPP:34516012:PPP2R3C:35116737:rev:-","EAPP--PPP2R3C",4.0,0.0,148.0,0.0,0.513,false,"NA"]
["TCGA-BLCA","TCGA-FD-A5BS-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",2.0,5703.0,236.0,234.0,0.508,true,"NA"]
["TCGA-BLCA","TCGA-FD-A5BT-01A","14:IRF9:24166392:+:11:AC091053.1:8693357:+:fusion","IRF9--AC091053.1",15.0,294.0,9.0,0.0,0.271,false,0.00833333333333]
["TCGA-BLCA","TCGA-FD-A5C0-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.51,false,"NA"]
["TCGA-BLCA","TCGA-FD-A5C1-01A","20:PTGIS:49511028:SPATA2:49908592:rev:-","PTGIS--SPATA2",1.0,0.0,1.0,0.0,0.953,false,"NA"]
["TCGA-BLCA","TCGA-FD-A62N-01A","3:COL7A1:48572671:-:15:B2M:44717844:+:fusion","COL7A1--B2M",2.0,0.0,1.0,0.0,0.49,false,0.00566893424036]
["TCGA-BLCA","TCGA-FD-A6TE-01A","15:AC124312.1:24982437:SNURF:24962114:rev:+","AC124312.1--SNURF",1.0,19.0,48.0,10.0,0.924,false,"NA"]
["TCGA-BLCA","TCGA-FJ-A3Z7-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.653,false,"NA"]
["TCGA-BLCA","TCGA-FT-A3EE-01A","20:AHCY:34294081:GGT7:34854923:rev:-","AHCY--GGT7",1.0,0.0,1.0,0.0,0.884,false,"NA"]
["TCGA-BLCA","TCGA-G2-A2EF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.998,true,"NA"]
["TCGA-BLCA","TCGA-G2-A2ES-01A","12:HSP90B1:103931623:+:12:TNFRSF1A:6329899:-:strandcross","HSP90B1--TNFRSF1A",4.0,0.0,3.0,0.0,0.195,false,0.0135746606335]
["TCGA-BLCA","TCGA-G2-A3IE-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.616,true,"NA"]
["TCGA-BLCA","TCGA-GC-A3BM-01A","1:CLSTN1:9729026:-:17:PRPF8:1654980:-:fusion","CLSTN1--PRPF8",5.0,2949.0,49.0,14.0,0.715,true,0.00294985250737]
["TCGA-BLCA","TCGA-GC-A3RB-01A","7:ACTB:5528281:-:17:DCXR:82036987:-:fusion","ACTB--DCXR",2.0,0.0,1.0,0.0,0.177,false,0.00911161731207]
["TCGA-BLCA","TCGA-GC-A6I1-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.512,false,"NA"]
["TCGA-BLCA","TCGA-GC-A6I3-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.519,true,"NA"]
["TCGA-BLCA","TCGA-GD-A3OQ-11A","5:MATR3:139293805:CTNNA1:138886212:rev:+","MATR3--CTNNA1",1.0,15.0,36.0,6.0,0.898,false,"NA"]
["TCGA-BLCA","TCGA-GD-A3OS-01A","14:IRF9:24166392:+:1:AL513523.10:153774079:-:fusion","IRF9--AL513523.10",4.0,603.0,1.0,0.0,0.202,false,0.0174603174603]
["TCGA-BLCA","TCGA-GU-A42Q-01A","17:KRT17:41624743:-:1:TPR:186326235:-:fusion","KRT17--TPR",2.0,0.0,1.0,0.0,0.455,false,0.0154142581888]
["TCGA-BLCA","TCGA-GU-A763-01A","3:PCCB:136337895:+:8:AC130304.1:37858949:+:fusion","PCCB--AC130304.1",2.0,769.0,1.0,0.0,0.355,false,0.00406504065041]
["TCGA-BLCA","TCGA-GV-A3JV-01A","17:ACTG1:81510480:-:17:CLDN7:7262945:-:reg","ACTG1--CLDN7",2.0,0.0,1.0,0.0,0.449,false,0.0121951219512]
["TCGA-BLCA","TCGA-GV-A3JX-01A","11:CFL1:65855009:-:1:DMBX1:46512043:+:fusion","CFL1--DMBX1",3.0,0.0,1.0,0.0,0.162,false,0.0280898876404]
["TCGA-BLCA","TCGA-GV-A3JX-01A","4:MRFAP1:6641258:+:12:TUBA1B:49128785:-:fusion","MRFAP1--TUBA1B",10.0,0.0,2.0,0.0,0.275,false,0.0224719101124]
["TCGA-BLCA","TCGA-GV-A40E-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.437,false,"NA"]
["TCGA-BLCA","TCGA-GV-A40G-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",3.0,5352.0,117.0,117.0,0.418,true,"NA"]
["TCGA-BLCA","TCGA-HQ-A5NE-01A","5:PDCD6:272772:PLEKHG4B:181514:rev:+","PDCD6--PLEKHG4B",2.0,0.0,1.0,0.0,0.667,false,"NA"]
["TCGA-BLCA","TCGA-K4-A3WV-01A","8:AC090809.1:36701821:-:11:DGAT2:75790188:+:fusion","AC090809.1--DGAT2",1.0,0.0,1.0,0.0,0.94,false,0.0]
["TCGA-BLCA","TCGA-K4-A54R-11A","6:PPP1R10:30600400:FLOT1:30740853:rev:-","PPP1R10--FLOT1",3.0,2233.0,39.0,38.0,0.462,true,"NA"]
["TCGA-BLCA","TCGA-K4-A5RH-01A","7:GNA12:2843853:-:X:ZC4H2:64922243:-:fusion","GNA12--ZC4H2",1.0,0.0,1.0,0.0,0.966,false,0.0]
["TCGA-BLCA","TCGA-K4-A5RJ-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.189,true,0.0207373271889]
["TCGA-BLCA","TCGA-KQ-A41P-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.61,true,"NA"]
["TCGA-BLCA","TCGA-LC-A66R-01A","1:KHDRBS1:32031640:+:14:IGHG1:105741795:-:fusion","KHDRBS1--IGHG1",4.0,0.0,3.0,0.0,0.25,false,0.0275689223058]
["TCGA-BLCA","TCGA-PQ-A6FN-01A","17:P4HB:81843459:-:8:SCRIB:143795530:-:fusion","P4HB--SCRIB",2.0,0.0,1.0,0.0,0.299,false,0.0133037694013]
["TCGA-BLCA","TCGA-UY-A78L-01A","16:ESRP2:68233199:-:8:AP003352.1:98041726:+:fusion","ESRP2--AP003352.1",2.0,10515.0,4.0,4.0,0.362,true,0.0102564102564]
["TCGA-BLCA","TCGA-UY-A78O-01A","2:UGT1A6:233693865:+:1:SERINC2:31432967:+:fusion","UGT1A6--SERINC2",1.0,0.0,1.0,0.0,0.937,false,0.0]
["TCGA-BLCA","TCGA-UY-A8OC-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",11.0,0.0,1126.0,0.0,0.49,false,"NA"]
["TCGA-BLCA","TCGA-XF-A8HF-01A","7:BMT2:112819147:GPR85:113086414:rev:-","BMT2--GPR85",3.0,832.0,56.0,46.0,0.444,false,"NA"]
["TCGA-BLCA","TCGA-XF-A9SK-01A","3:PPARG:12312453:ATG7:11379972:rev:+","PPARG--ATG7",1.0,0.0,1.0,0.0,0.855,false,"NA"]
["TCGA-BLCA","TCGA-XF-A9ST-01A","22:RPS19BP1:39529156:-:1:TINAGL1:31586839:+:fusion","RPS19BP1--TINAGL1",2.0,0.0,1.0,0.0,0.226,false,0.0205128205128]
["TCGA-BLCA","TCGA-XF-A9T4-01A","1:DCAF6:168004793:MPZL1:167765583:rev:+","DCAF6--MPZL1",2.0,3.0,3.0,2.0,0.771,false,"NA"]
["TCGA-BLCA","TCGA-XF-AAMQ-01A","3:UBXN7:196402952:WDR53:196561491:rev:-","UBXN7--WDR53",1.0,1.0,1.0,0.0,0.812,false,"NA"]
["TCGA-BLCA","TCGA-XF-AAMR-01A","1:HDGF:156743841:-:17:PHF23:7239506:-:fusion","HDGF--PHF23",3.0,0.0,15.0,0.0,0.497,false,0.0156950672646]
["TCGA-BLCA","TCGA-XF-AAN0-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.997,true,"NA"]
["TCGA-BLCA","TCGA-YC-A9TC-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",11.0,0.0,1758.0,0.0,0.578,false,"NA"]
["TCGA-BLCA","TCGA-ZF-A9R3-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",3.0,0.0,319.0,0.0,0.56,false,0.0]
["TCGA-BLCA","TCGA-ZF-AA4N-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.447,false,0.015503875969]
["TCGA-BLCA","TCGA-ZF-AA4W-01A","9:CDK5RAP2:120388876:PHF19:120868356:rev:-","CDK5RAP2--PHF19",3.0,0.0,135.0,0.0,0.416,false,"NA"]
["TCGA-BRCA","TCGA-3C-AAAU-01A","1:RHOC:112701131:-:5:COX7C:86617973:+:fusion","RHOC--COX7C",3.0,0.0,26.0,0.0,0.644,false,0.00858369098712]
["TCGA-BRCA","TCGA-3C-AALK-01A","17:NARF:82458830:+:17:P4HB:81845742:-:strandcross","NARF--P4HB",3.0,0.0,1.0,0.0,0.568,false,0.00803212851406]
["TCGA-BRCA","TCGA-A1-A0SI-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",5.0,0.0,205.0,0.0,0.301,false,0.0136518771331]
["TCGA-BRCA","TCGA-A1-A0SN-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.286,true,0.0209580838323]
["TCGA-BRCA","TCGA-A2-A04T-01A","15:AC107976.2:94856719:-:19:NOP53:47755474:+:fusion","AC107976.2--NOP53",1.0,67.0,90.0,15.0,0.881,false,0.0027027027027]
["TCGA-BRCA","TCGA-A2-A04X-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",3.0,2061.0,160.0,157.0,0.413,true,"NA"]
["TCGA-BRCA","TCGA-A2-A04Y-01A","20:GNAS:58909715:+:18:CXXC1:50283815:-:fusion","GNAS--CXXC1",2.0,0.0,1.0,0.0,0.244,false,0.00808080808081]
["TCGA-BRCA","TCGA-A2-A0CR-01A","15:HAPLN3:88877295:PEX11A:89677932:rev:-","HAPLN3--PEX11A",7.0,430.0,44.0,33.0,0.564,true,"NA"]
["TCGA-BRCA","TCGA-A2-A0CT-01A","7:COL1A2:94420444:+:17:COL1A1:50189275:-:fusion","COL1A2--COL1A1",2.0,7431.0,3.0,3.0,0.981,true,0.0]
["TCGA-BRCA","TCGA-A2-A0D3-01A","19:ZNF714:21118885:ZNF90:20121222:rev:+","ZNF714--ZNF90",4.0,32.0,31.0,1.0,0.473,false,"NA"]
["TCGA-BRCA","TCGA-A2-A0EN-01A","3:LTF:46437940:-:19:ECH1:38817364:-:fusion","LTF--ECH1",2.0,0.0,1.0,0.0,0.45,false,0.0228571428571]
["TCGA-BRCA","TCGA-A2-A0EV-01A","15:STARD9:42630146:+:22:MB:35611106:-:fusion","STARD9--MB",1.0,212.0,28.0,16.0,0.671,false,0.00348432055749]
["TCGA-BRCA","TCGA-A2-A0ST-01A","17:ARSG:68395193:KPNA2:68046504:rev:+","ARSG--KPNA2",2.0,0.0,4.0,0.0,0.471,false,"NA"]
["TCGA-BRCA","TCGA-A2-A0T4-01A","11:KDM2A:67181892:+:6:FAM83B:54870187:+:fusion","KDM2A--FAM83B",1.0,0.0,1.0,0.0,0.781,false,0.00552486187845]
["TCGA-BRCA","TCGA-A2-A0T6-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",3.0,0.0,319.0,0.0,0.517,false,0.0]
["TCGA-BRCA","TCGA-A2-A0YH-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",3.0,8291.0,284.0,283.0,0.778,true,"NA"]
["TCGA-BRCA","TCGA-A2-A0YM-01A","15:INO80:41016088:NDUFAF1:41397140:rev:-","INO80--NDUFAF1",1.0,0.0,1.0,0.0,0.81,false,"NA"]
["TCGA-BRCA","TCGA-A2-A1G0-01A","17:APPBP2:60464788:-:5:CCL28:43382052:-:fusion","APPBP2--CCL28",4.0,2686.0,31.0,30.0,0.319,true,0.02331002331]
["TCGA-BRCA","TCGA-A2-A1G1-01A","12:COX6A1:120438810:+:12:AC024896.1:26971586:+:rev","COX6A1--AC024896.1",2.0,3091.0,1.0,1.0,0.554,true,0.0105900151286]
["TCGA-BRCA","TCGA-A2-A1G6-01A","7:STAG3:100180895:+:19:AC005523.2:4795559:-:fusion","STAG3--AC005523.2",2.0,3815.0,67.0,65.0,0.317,true,0.0142045454545]
["TCGA-BRCA","TCGA-A2-A25F-01A","19:UBA52:18572607:+:3:SMARCC1:47706530:-:fusion","UBA52--SMARCC1",3.0,744.0,27.0,26.0,0.212,true,0.0148148148148]
["TCGA-BRCA","TCGA-A2-A3XT-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",16.0,0.0,1499.0,0.0,0.20420723732095,false,0.00746268656716]
["TCGA-BRCA","TCGA-A2-A3XY-01A","8:PPP2R2A:26361012:+:8:PCMTD1:51898970:-:strandcross","PPP2R2A--PCMTD1",3.0,0.0,1.0,0.0,0.378,false,0.003125]
["TCGA-BRCA","TCGA-A2-A4RW-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.923,true,"NA"]
["TCGA-BRCA","TCGA-A7-A0CH-11A","19:TMEM143:48360319:PLEKHA4:48838129:rev:-","TMEM143--PLEKHA4",2.0,56.0,5.0,2.0,0.604,true,"NA"]
["TCGA-BRCA","TCGA-A7-A0D9-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.5,true,"NA"]
["TCGA-BRCA","TCGA-A7-A0DB-01C","19:ZNF91:23358730:-:19:AC139769.1:23831597:+:strandcross","ZNF91--AC139769.1",9.0,0.0,1.0,0.0,0.284,false,0.0891089108911]
["TCGA-BRCA","TCGA-A7-A13D-01B","17:PSMD12:67366412:-:17:PITPNC1:67532802:+:strandcross","PSMD12--PITPNC1",1.0,2.0,3.0,1.0,0.971,false,0.0]
["TCGA-BRCA","TCGA-A7-A13F-11A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",1.0,1067.0,394.0,191.0,0.887,false,0.00636942675159]
["TCGA-BRCA","TCGA-A7-A13G-01A","15:STARD9:42630146:+:22:MB:35617265:-:fusion","STARD9--MB",5.0,2569.0,85.0,85.0,0.343,true,0.0122549019608]
["TCGA-BRCA","TCGA-A7-A13G-01B","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.666,true,"NA"]
["TCGA-BRCA","TCGA-A7-A26F-01A","8:LOXL2:23403954:ENTPD4:23449997:rev:-","LOXL2--ENTPD4",1.0,0.0,1.0,0.0,0.88,false,"NA"]
["TCGA-BRCA","TCGA-A7-A26F-01B","1:TSNAX:231542611:TSNAX-DISC1:231537213:rev:+","TSNAX--TSNAX-DISC1",6.0,42.0,35.0,27.0,1.0,true,"NA"]
["TCGA-BRCA","TCGA-A7-A26I-01A","7:PILRA:100367617:PILRB:100367349:rev:+","PILRA--PILRB",1.0,0.0,2.0,0.0,0.813,false,"NA"]
["TCGA-BRCA","TCGA-A7-A2KD-01A","17:KIAA0100:28639315:-:11:GRM5:88567992:-:fusion","KIAA0100--GRM5",1.0,0.0,1.0,0.0,0.735,false,0.0106100795756]
["TCGA-BRCA","TCGA-A7-A425-01A","3:VPS8:184825048:CHRD:184384537:rev:+","VPS8--CHRD",2.0,110.0,27.0,10.0,0.553,false,"NA"]
["TCGA-BRCA","TCGA-A7-A426-01A","1:PLA2G2A:19975438:-:16:MBTPS1:84070038:-:fusion","PLA2G2A--MBTPS1",4.0,0.0,14.0,0.0,0.555,false,0.0]
["TCGA-BRCA","TCGA-A7-A4SF-01A","17:ERBB2:39728577:+:7:KDM7A:140133656:-:fusion","ERBB2--KDM7A",4.0,0.0,3.0,0.0,0.16,false,0.0199004975124]
["TCGA-BRCA","TCGA-A7-A5ZX-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",11.0,35.0,139.0,0.0,0.462,false,"NA"]
["TCGA-BRCA","TCGA-A7-A6VY-01A","14:RBM23:22904875:PSMB5:23033674:rev:-","RBM23--PSMB5",1.0,2.0,4.0,2.0,0.903,false,"NA"]
["TCGA-BRCA","TCGA-A8-A06R-01A","4:CLOCK:55432476:-:9:HMCN2:130362867:+:fusion","CLOCK--HMCN2",2.0,0.0,13.0,0.0,0.296,false,0.025]
["TCGA-BRCA","TCGA-A8-A076-01A","7:ACTB:5528470:-:11:AP000842.4:125957900:+:fusion","ACTB--AP000842.4",7.0,0.0,7.0,0.0,0.277,false,0.0114942528736]
["TCGA-BRCA","TCGA-A8-A07E-01A","19:ZNF329:58127425:-:22:XBP1:28797205:-:fusion","ZNF329--XBP1",2.0,289.0,2.0,1.0,0.558,false,0.0130548302872]
["TCGA-BRCA","TCGA-A8-A07G-01A","12:LACRT:54633180:-:2:COL3A1:189003734:+:fusion","LACRT--COL3A1",2.0,0.0,1.0,0.0,0.335,false,0.0096463022508]
["TCGA-BRCA","TCGA-A8-A07W-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.715,true,"NA"]
["TCGA-BRCA","TCGA-A8-A081-01A","2:HDLBP:241315102:STK25:241501708:rev:-","HDLBP--STK25",1.0,0.0,1.0,0.0,0.999,false,"NA"]
["TCGA-BRCA","TCGA-A8-A08A-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.537,false,"NA"]
["TCGA-BRCA","TCGA-A8-A08G-01A","15:SCAPER:76574158:-:15:MAPKBP1:41799823:+:strandcross","SCAPER--MAPKBP1",1.0,0.0,1.0,0.0,0.772,false,0.00502512562814]
["TCGA-BRCA","TCGA-A8-A08O-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",4.0,7942.0,781.0,771.0,0.319,true,0.0257731958763]
["TCGA-BRCA","TCGA-A8-A08R-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.734,false,"NA"]
["TCGA-BRCA","TCGA-A8-A08X-01A","9:SCAI:124999891:-:8:CA8:60189985:-:fusion","SCAI--CA8",2.0,0.0,1.0,0.0,0.725,false,0.00854700854701]
["TCGA-BRCA","TCGA-A8-A096-01A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",2.0,2223.0,62.0,62.0,0.491,true,"NA"]
["TCGA-BRCA","TCGA-A8-A097-01A","2:RASGRP3:33481304:TTC27:32678856:rev:+","RASGRP3--TTC27",1.0,246.0,85.0,43.0,0.829,false,"NA"]
["TCGA-BRCA","TCGA-A8-A09G-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.614,true,"NA"]
["TCGA-BRCA","TCGA-A8-A09I-01A","5:GFM2:74765035:POC5:75685484:rev:-","GFM2--POC5",2.0,125.0,64.0,16.0,0.963,true,"NA"]
["TCGA-BRCA","TCGA-A8-A09T-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",3.0,8291.0,284.0,283.0,0.548,true,"NA"]
["TCGA-BRCA","TCGA-A8-A09W-01A","17:ALOX15B:8047076:ACADVL:7224321:rev:+","ALOX15B--ACADVL",1.0,0.0,1.0,0.0,0.863,false,"NA"]
["TCGA-BRCA","TCGA-A8-A0A6-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",15.0,4574.0,830.0,638.0,0.155,true,0.0711743772242]
["TCGA-BRCA","TCGA-AC-A23E-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",2.0,4613.0,511.0,496.0,0.422,true,"NA"]
["TCGA-BRCA","TCGA-AC-A2BK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.524,true,"NA"]
["TCGA-BRCA","TCGA-AC-A2FB-11A","22:TIMP3:32802122:FBXO7:32479133:rev:+","TIMP3--FBXO7",1.0,0.0,1.0,0.0,0.866,false,"NA"]
["TCGA-BRCA","TCGA-AC-A2FM-01A","5:MRPL22:154941265:CNOT8:154865192:rev:+","MRPL22--CNOT8",1.0,0.0,1.0,0.0,0.915,false,"NA"]
["TCGA-BRCA","TCGA-AC-A2FO-01A","17:RNF167:4941157:+:17:AC020558.1:17610336:+:reg","RNF167--AC020558.1",1.0,0.0,1.0,0.0,0.883,false,0.0040899795501]
["TCGA-BRCA","TCGA-AC-A2QH-01B","2:AC079447.1:99216114:MRPL30:99194751:rev:+","AC079447.1--MRPL30",1.0,10.0,7.0,4.0,0.831,false,"NA"]
["TCGA-BRCA","TCGA-AC-A3HN-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.742,true,"NA"]
["TCGA-BRCA","TCGA-AC-A3QP-01A","19:BORCS8:19182573:SUGP1:19277076:rev:-","BORCS8--SUGP1",2.0,0.0,1.0,0.0,0.596,false,"NA"]
["TCGA-BRCA","TCGA-AC-A3TM-01A","19:MYO1F:8555392:-:17:RPL38:74203693:+:fusion","MYO1F--RPL38",5.0,4077.0,7.0,7.0,0.168,true,0.00847457627119]
["TCGA-BRCA","TCGA-AC-A3W5-01A","12:AVIL:57806132:-:17:COL1A1:50187122:-:fusion","AVIL--COL1A1",1.0,0.0,1.0,0.0,0.927,false,0.0]
["TCGA-BRCA","TCGA-AC-A62V-01A","20:DLGAP4:36462599:+:17:TUBD1:59863847:-:fusion","DLGAP4--TUBD1",3.0,0.0,1.0,0.0,0.604,false,0.00297619047619]
["TCGA-BRCA","TCGA-AC-A62X-01A","6:TEAD3:35473597:AL133507.1:35989902:rev:-","TEAD3--AL133507.1",2.0,16.0,10.0,0.0,0.424,false,"NA"]
["TCGA-BRCA","TCGA-AC-A6NO-01A","10:ANXA7:73377445:USP54:73545672:rev:-","ANXA7--USP54",1.0,444.0,49.0,27.0,0.968,false,"NA"]
["TCGA-BRCA","TCGA-AC-A8OR-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.416,false,"NA"]
["TCGA-BRCA","TCGA-AN-A04A-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.439,false,0.00413223140496]
["TCGA-BRCA","TCGA-AN-A0AK-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.441,false,"NA"]
["TCGA-BRCA","TCGA-AN-A0AM-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",7.0,4574.0,830.0,638.0,0.209,true,0.0240963855422]
["TCGA-BRCA","TCGA-AN-A0FJ-01A","22:CDC45:19516893:DGCR5:19014353:rev:+","CDC45--DGCR5",2.0,0.0,1.0,0.0,0.767,false,"NA"]
["TCGA-BRCA","TCGA-AN-A0FT-01A","14:HAUS4:22947887:-:12:FKBP4:2801117:+:fusion","HAUS4--FKBP4",2.0,0.0,1.0,0.0,0.169,false,0.0225225225225]
["TCGA-BRCA","TCGA-AN-A0XL-01A","5:MATR3:139293805:CTNNA1:138886212:rev:+","MATR3--CTNNA1",1.0,15.0,36.0,6.0,0.888,true,"NA"]
["TCGA-BRCA","TCGA-AN-A0XS-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.699,false,"NA"]
["TCGA-BRCA","TCGA-AO-A03O-01A","14:TTC6:37606742:MIPOL1:37308056:rev:+","TTC6--MIPOL1",1.0,2.0,2.0,1.0,0.832,false,"NA"]
["TCGA-BRCA","TCGA-AO-A03R-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",2.0,0.0,1126.0,0.0,0.486,false,"NA"]
["TCGA-BRCA","TCGA-AO-A0J2-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",2.0,35.0,139.0,0.0,0.459,false,"NA"]
["TCGA-BRCA","TCGA-AO-A0J7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.436,true,"NA"]
["TCGA-BRCA","TCGA-AO-A0JD-01A","6:PTPRK:128520259:-:8:OXR1:106518943:+:fusion","PTPRK--OXR1",1.0,0.0,1.0,0.0,0.797,false,0.00724637681159]
["TCGA-BRCA","TCGA-AO-A0JG-01A","7:AZGP1:99968155:-:6:HLA-DPA1:33069300:-:fusion","AZGP1--HLA-DPA1",6.0,0.0,12.0,0.0,0.255,false,0.0181451612903]
["TCGA-BRCA","TCGA-AO-A128-01A","19:HKR1:37359546:ZNF567:36694802:rev:+","HKR1--ZNF567",1.0,534.0,55.0,38.0,0.833,false,"NA"]
["TCGA-BRCA","TCGA-AO-A12B-01A","17:LGALS3BP:78971256:-:2:AC009948.1:178430695:+:fusion","LGALS3BP--AC009948.1",2.0,0.0,1.0,0.0,0.159,false,0.0365296803653]
["TCGA-BRCA","TCGA-AO-A12D-01A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",1.0,13.0,47.0,11.0,0.729,false,0.00947867298578]
["TCGA-BRCA","TCGA-AO-A1KR-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",3.0,187.0,145.0,16.0,0.247,false,0.0191387559809]
["TCGA-BRCA","TCGA-AO-A1KT-01A","9:TUBB4B:137241417:+:X:UBA1:47212990:+:fusion","TUBB4B--UBA1",2.0,0.0,1.0,0.0,0.423,false,0.015]
["TCGA-BRCA","TCGA-AQ-A54O-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,29.0,70.0,0.0,0.416,false,"NA"]
["TCGA-BRCA","TCGA-AR-A0TP-01A","2:AC007966.1:185729329:-:2:LYPD6B:149212992:+:strandcross","AC007966.1--LYPD6B",1.0,0.0,1.0,0.0,0.797,false,0.00738007380074]
["TCGA-BRCA","TCGA-AR-A0TZ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.771,true,"NA"]
["TCGA-BRCA","TCGA-AR-A0U0-01A","2:CTDSP1:218402405:+:9:C9orf3:95086682:+:fusion","CTDSP1--C9orf3",3.0,72.0,73.0,23.0,1.0,true,0.0]
["TCGA-BRCA","TCGA-AR-A1AJ-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.426,true,"NA"]
["TCGA-BRCA","TCGA-AR-A1AQ-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",3.0,4613.0,511.0,496.0,0.503,true,"NA"]
["TCGA-BRCA","TCGA-AR-A1AV-01A","17:COL1A1:50189377:-:7:COL1A2:94408770:+:fusion","COL1A1--COL1A2",2.0,2315.0,2.0,2.0,0.928,true,0.0]
["TCGA-BRCA","TCGA-AR-A24K-01A","16:RSL1D1:11849258:-:3:NGLY1:25751263:-:fusion","RSL1D1--NGLY1",2.0,437.0,1.0,1.0,0.669,true,0.00765306122449]
["TCGA-BRCA","TCGA-AR-A24O-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.867,true,"NA"]
["TCGA-BRCA","TCGA-AR-A24Z-01A","4:MANBA:102689574:UBE2D3:102809855:rev:-","MANBA--UBE2D3",1.0,9.0,24.0,5.0,0.815,false,"NA"]
["TCGA-BRCA","TCGA-AR-A250-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",10.0,0.0,297.0,0.0,0.182,false,0.042492917847]
["TCGA-BRCA","TCGA-AR-A2LH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.744,true,"NA"]
["TCGA-BRCA","TCGA-AR-A2LL-01A","7:ZNF736:64336982:+:16:CHMP1A:89647331:-:fusion","ZNF736--CHMP1A",2.0,73.0,38.0,17.0,0.414,false,0.010775862069]
["TCGA-BRCA","TCGA-AR-A5QN-01A","1:SCAMP3:155255979:GON4L:155784389:rev:-","SCAMP3--GON4L",2.0,707.0,21.0,16.0,0.419,true,"NA"]
["TCGA-BRCA","TCGA-AR-A5QQ-01A","5:TGFBI:136033861:+:5:AC002428.1:135900526:-:strandcross","TGFBI--AC002428.1",1.0,0.0,1.0,0.0,0.904,false,0.00186219739292]
["TCGA-BRCA","TCGA-B6-A0I6-01A","8:TRPS1:115668545:-:8:RAD21:116866761:-:rev","TRPS1--RAD21",1.0,4.0,5.0,0.0,0.995,false,0.0]
["TCGA-BRCA","TCGA-B6-A0IG-01A","15:STARD9:42630146:+:22:MB:35617265:-:fusion","STARD9--MB",14.0,2569.0,85.0,85.0,0.227,true,0.0233050847458]
["TCGA-BRCA","TCGA-B6-A0IK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.932,true,"NA"]
["TCGA-BRCA","TCGA-B6-A0IO-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",3.0,187.0,145.0,16.0,0.182,false,0.0137174211248]
["TCGA-BRCA","TCGA-B6-A0RH-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",6.0,29.0,70.0,0.0,0.452,false,"NA"]
["TCGA-BRCA","TCGA-B6-A0RO-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.878,true,"NA"]
["TCGA-BRCA","TCGA-B6-A0RQ-01A","4:CFI:109746222:PITX2:110633008:rev:-","CFI--PITX2",6.0,0.0,1.0,0.0,0.415,false,"NA"]
["TCGA-BRCA","TCGA-B6-A0WW-01A","7:MYL10:101629041:-:4:UBE2K:39737420:+:fusion","MYL10--UBE2K",2.0,100.0,1.0,0.0,0.554,false,0.00554016620499]
["TCGA-BRCA","TCGA-B6-A0X4-01A","3:CPB1:148845626:+:2:CEBPZ:37201903:-:fusion","CPB1--CEBPZ",2.0,0.0,1.0,0.0,0.157,false,0.0509915014164]
["TCGA-BRCA","TCGA-B6-A400-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.639,true,"NA"]
["TCGA-BRCA","TCGA-B6-A409-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.843043624492707,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0AY-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",5.0,2011.0,360.0,280.0,0.562,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0AZ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.695,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0B3-01A","17:TANC2:63009626:TLK2:62596585:rev:+","TANC2--TLK2",1.0,0.0,1.0,0.0,0.961,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0B7-11A","17:RAB40B:82657793:-:11:NUMA1:72004816:-:fusion","RAB40B--NUMA1",3.0,0.0,4.0,0.0,0.365,false,0.00581395348837]
["TCGA-BRCA","TCGA-BH-A0B9-01A","2:RAB10:26034735:+:20:GNAS:58895612:+:fusion","RAB10--GNAS",1.0,5.0,1.0,0.0,0.661,false,0.00595238095238]
["TCGA-BRCA","TCGA-BH-A0BG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.499,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0BJ-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.462,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0BT-01A","1:NDUFS2:161214239:+:12:MYL6:56158356:+:fusion","NDUFS2--MYL6",2.0,0.0,1.0,0.0,0.506,false,0.00810810810811]
["TCGA-BRCA","TCGA-BH-A0BV-01A","1:AL359265.3:176207871:+:1:RFWD2:176046324:-:strandcross","AL359265.3--RFWD2",1.0,0.0,1.0,0.0,0.636,false,0.0119047619048]
["TCGA-BRCA","TCGA-BH-A0C3-01A","13:STK24:98576745:DOCK9:98955551:rev:-","STK24--DOCK9",1.0,0.0,1.0,0.0,0.813,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0DD-11A","20:SLC9A8:49815189:ZFAS1:49279104:rev:+","SLC9A8--ZFAS1",1.0,0.0,1.0,0.0,0.964,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0DI-01A","7:COL1A2:94421062:+:17:COL1A1:50194041:-:fusion","COL1A2--COL1A1",4.0,60.0,4.0,1.0,0.158,false,0.00961538461538]
["TCGA-BRCA","TCGA-BH-A0DO-11A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.425,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0DP-11A","8:PLPBP:37766355:+:16:CHMP1A:89647331:-:fusion","PLPBP--CHMP1A",2.0,70.0,43.0,10.0,0.615,false,0.0102739726027]
["TCGA-BRCA","TCGA-BH-A0DX-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.423,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0EA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.931,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0EI-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.467,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0H5-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.866,true,"NA"]
["TCGA-BRCA","TCGA-BH-A0H9-11A","6:HLA-E:30492583:+:6:ZNRD1ASP:30009171:-:strandcross","HLA-E--ZNRD1ASP",1.0,174.0,3.0,1.0,0.966,false,0.0]
["TCGA-BRCA","TCGA-BH-A0HB-01A","19:EPN1:55675435:U2AF2:55668507:rev:+","EPN1--U2AF2",1.0,1.0,1.0,0.0,0.967,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0HQ-01A","19:AKT2:40232335:C19orf47:40343805:rev:-","AKT2--C19orf47",2.0,0.0,47.0,0.0,0.415,false,"NA"]
["TCGA-BRCA","TCGA-BH-A0HW-01A","6:ESR1:151702005:+:6:RMND1:151436554:-:strandcross","ESR1--RMND1",1.0,0.0,1.0,0.0,0.784,false,0.00687285223368]
["TCGA-BRCA","TCGA-BH-A18F-01A","1:ZZZ3:77639449:USP33:77725762:rev:-","ZZZ3--USP33",2.0,0.0,1.0,0.0,0.514,false,"NA"]
["TCGA-BRCA","TCGA-BH-A18J-01A","3:RAB5A:19975752:+:3:AC092422.1:25174119:+:reg","RAB5A--AC092422.1",1.0,0.0,1.0,0.0,0.859,false,0.00694444444444]
["TCGA-BRCA","TCGA-BH-A18M-01A","7:ACTB:5528470:-:1:HSPG2:21833384:-:fusion","ACTB--HSPG2",6.0,0.0,19.0,0.0,0.167,false,0.0568181818182]
["TCGA-BRCA","TCGA-BH-A18R-01A","6:BTN3A3:26450133:BTN3A1:26412412:rev:+","BTN3A3--BTN3A1",1.0,2659.0,122.0,88.0,0.934,true,"NA"]
["TCGA-BRCA","TCGA-BH-A18S-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.908,true,"NA"]
["TCGA-BRCA","TCGA-BH-A18V-11A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.779,false,"NA"]
["TCGA-BRCA","TCGA-BH-A1EO-11A","3:AC083798.2:122416250:FAM162A:122402760:rev:+","AC083798.2--FAM162A",3.0,5.0,11.0,4.0,0.992,true,"NA"]
["TCGA-BRCA","TCGA-BH-A1EU-11A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.456,true,"NA"]
["TCGA-BRCA","TCGA-BH-A1EV-11A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",2.0,2223.0,62.0,62.0,0.414,true,"NA"]
["TCGA-BRCA","TCGA-BH-A1F0-11B","2:RASGRP3:33481304:TTC27:32678856:rev:+","RASGRP3--TTC27",2.0,246.0,85.0,43.0,0.576,false,"NA"]
["TCGA-BRCA","TCGA-BH-A1F2-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.716,true,"NA"]
["TCGA-BRCA","TCGA-BH-A1F8-01A","11:MMP13:102945119:-:7:UBE3C:157256914:+:fusion","MMP13--UBE3C",2.0,876.0,1.0,1.0,0.484,true,0.00420168067227]
["TCGA-BRCA","TCGA-BH-A1FD-01A","16:CNOT1:58629728:GOT2:58723902:rev:-","CNOT1--GOT2",1.0,2.0,3.0,1.0,0.89,false,"NA"]
["TCGA-BRCA","TCGA-BH-A1FG-01A","6:MPC1:166382806:-:6:PXT1:36391874:-:reg","MPC1--PXT1",1.0,0.0,1.0,0.0,0.776,false,0.00303951367781]
["TCGA-BRCA","TCGA-BH-A1FJ-01A","19:AC074212.1:45765964:+:1:MUC1:155187538:-:fusion","AC074212.1--MUC1",2.0,0.0,8.0,0.0,0.302,false,0.0164319248826]
["TCGA-BRCA","TCGA-BH-A1FM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.488,true,"NA"]
["TCGA-BRCA","TCGA-BH-A202-01A","2:FN1:215379130:-:16:HCFC1R1:3024246:-:fusion","FN1--HCFC1R1",3.0,0.0,5.0,0.0,0.228,false,0.0174672489083]
["TCGA-BRCA","TCGA-BH-A204-01A","8:NCOA2:70296744:TRAM1:70600082:rev:-","NCOA2--TRAM1",1.0,3.0,4.0,1.0,0.828,false,"NA"]
["TCGA-BRCA","TCGA-BH-A28Q-01A","21:TFF3:42312053:CBS:43055901:rev:-","TFF3--CBS",3.0,79.0,80.0,0.0,0.44,false,"NA"]
["TCGA-BRCA","TCGA-BH-A42V-01A","14:KIAA0391:35180777:FAM177A1:35053278:rev:+","KIAA0391--FAM177A1",1.0,0.0,2.0,0.0,0.828,false,"NA"]
["TCGA-BRCA","TCGA-BH-A8FY-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.558,false,"NA"]
["TCGA-BRCA","TCGA-C8-A12L-01A","X:PLP2:49174425:+:20:PPDPF:63520765:+:fusion","PLP2--PPDPF",3.0,0.0,1.0,0.0,0.16,false,0.0272952853598]
["TCGA-BRCA","TCGA-C8-A12T-01A","11:CFL1:65854832:-:7:COL1A2:94430247:+:fusion","CFL1--COL1A2",3.0,390.0,14.0,1.0,0.479,false,0.00398406374502]
["TCGA-BRCA","TCGA-C8-A12V-01A","19:FBXO46:45714769:-:11:GSEC:126342322:-:fusion","FBXO46--GSEC",3.0,42.0,1.0,0.0,0.203,false,0.0181347150259]
["TCGA-BRCA","TCGA-C8-A130-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,411.0,151.0,68.0,0.822,true,"NA"]
["TCGA-BRCA","TCGA-C8-A137-01A","17:COA3:42797634:AARSD1:42955456:rev:-","COA3--AARSD1",4.0,4147.0,74.0,73.0,0.746,true,"NA"]
["TCGA-BRCA","TCGA-C8-A1HI-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.411,false,"NA"]
["TCGA-BRCA","TCGA-C8-A1HK-01A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",3.0,2223.0,62.0,62.0,0.544,true,"NA"]
["TCGA-BRCA","TCGA-C8-A1HM-01A","8:ATP6V1H:53829444:TCEA1:54010492:rev:-","ATP6V1H--TCEA1",1.0,1.0,4.0,0.0,0.964,false,"NA"]
["TCGA-BRCA","TCGA-C8-A26W-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",3.0,198.0,115.0,72.0,0.863,true,"NA"]
["TCGA-BRCA","TCGA-C8-A26Y-01A","5:HSPA9:138567001:-:3:TMEM45A:100555209:+:fusion","HSPA9--TMEM45A",3.0,0.0,1.0,0.0,0.167,false,0.0302375809935]
["TCGA-BRCA","TCGA-C8-A27B-01A","6:BTN3A3:26450133:BTN3A1:26412412:rev:+","BTN3A3--BTN3A1",1.0,2659.0,122.0,88.0,0.814,true,"NA"]
["TCGA-BRCA","TCGA-C8-A8HQ-01A","6:PSMG4:3259196:+:6:EEF1E1:8080030:-:strandcross","PSMG4--EEF1E1",1.0,0.0,1.0,0.0,0.604,false,0.00705882352941]
["TCGA-BRCA","TCGA-D8-A143-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.545,false,"NA"]
["TCGA-BRCA","TCGA-D8-A146-01A","12:PIP4K2C:57594122:+:2:ARHGAP15:143202134:+:fusion","PIP4K2C--ARHGAP15",1.0,0.0,1.0,0.0,0.92,false,0.0]
["TCGA-BRCA","TCGA-D8-A1JA-01A","17:ERBB2:39707141:+:9:RPS6:19378918:-:fusion","ERBB2--RPS6",1.0,0.0,1.0,0.0,0.718,false,0.00744416873449]
["TCGA-BRCA","TCGA-D8-A1JF-01A","7:BMT2:112939591:GPR85:113084891:rev:-","BMT2--GPR85",1.0,0.0,1.0,0.0,0.941,false,"NA"]
["TCGA-BRCA","TCGA-D8-A1JH-01A","2:GRHL1:9995360:+:22:XBP1:28797205:-:fusion","GRHL1--XBP1",1.0,220.0,1.0,0.0,0.709,false,0.00397614314115]
["TCGA-BRCA","TCGA-D8-A1JM-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",2.0,1067.0,394.0,191.0,0.954,true,0.0]
["TCGA-BRCA","TCGA-D8-A1JP-01A","9:FANCC:95317526:-:9:SLC28A3:84288178:-:reg","FANCC--SLC28A3",1.0,0.0,1.0,0.0,0.952,false,0.0]
["TCGA-BRCA","TCGA-D8-A1X7-01A","2:COL5A2:189052172:-:17:COL1A1:50192693:-:fusion","COL5A2--COL1A1",1.0,87.0,1.0,0.0,0.63,false,0.0125786163522]
["TCGA-BRCA","TCGA-D8-A1XA-01A","16:ALDOA:30067366:+:19:AP1M2:10579858:-:fusion","ALDOA--AP1M2",2.0,0.0,1.0,0.0,0.374,false,0.0172413793103]
["TCGA-BRCA","TCGA-D8-A1XM-01A","19:FTL:48966406:+:11:FTH1:61964891:-:fusion","FTL--FTH1",1.0,53.0,1.0,0.0,0.841,false,0.0019305019305]
["TCGA-BRCA","TCGA-D8-A1XR-01A","8:CA13:85221125:E2F5:85202147:rev:+","CA13--E2F5",1.0,0.0,1.0,0.0,0.891,false,"NA"]
["TCGA-BRCA","TCGA-D8-A1XY-01A","16:SLC9A3R2:2036998:+:1:MUC1:155191337:-:fusion","SLC9A3R2--MUC1",1.0,0.0,1.0,0.0,0.653,false,0.0125]
["TCGA-BRCA","TCGA-D8-A1Y1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",14.0,9462.0,7336.0,7317.0,0.816,true,"NA"]
["TCGA-BRCA","TCGA-D8-A27H-01A","12:GLS2:56470952:ATP5B:56643958:rev:-","GLS2--ATP5B",2.0,0.0,1.0,0.0,0.453,false,"NA"]
["TCGA-BRCA","TCGA-D8-A27K-01A","16:CLUAP1:3509969:AC108134.4:3109425:rev:+","CLUAP1--AC108134.4",2.0,75.0,1.0,0.0,0.558,false,"NA"]
["TCGA-BRCA","TCGA-D8-A27P-01A","7:ACTB:5528470:-:12:SCARB1:124786503:-:fusion","ACTB--SCARB1",5.0,0.0,6.0,0.0,0.158,false,0.0383275261324]
["TCGA-BRCA","TCGA-D8-A27W-01A","5:HSPA9:138555360:-:12:AC005841.1:2803938:-:fusion","HSPA9--AC005841.1",4.0,1071.0,6.0,0.0,0.685,false,0.00595238095238]
["TCGA-BRCA","TCGA-D8-A73X-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.433,true,0.00699300699301]
["TCGA-BRCA","TCGA-E2-A10C-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.467,false,"NA"]
["TCGA-BRCA","TCGA-E2-A10F-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",6.0,1.0,1034.0,1.0,0.598,false,"NA"]
["TCGA-BRCA","TCGA-E2-A14V-01A","11:LDLRAD3:36098461:TRIM44:35685259:rev:+","LDLRAD3--TRIM44",1.0,0.0,4.0,0.0,0.967,false,"NA"]
["TCGA-BRCA","TCGA-E2-A14X-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.517,false,"NA"]
["TCGA-BRCA","TCGA-E2-A154-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",3.0,2061.0,160.0,157.0,0.437,true,"NA"]
["TCGA-BRCA","TCGA-E2-A159-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.406,false,"NA"]
["TCGA-BRCA","TCGA-E2-A15G-01A","9:GNAQ:77794463:-:9:TRPM6:74858748:-:reg","GNAQ--TRPM6",1.0,0.0,1.0,0.0,0.947,false,0.00487804878049]
["TCGA-BRCA","TCGA-E2-A15J-01A","11:CD151:834591:RPLP2:811597:rev:+","CD151--RPLP2",1.0,0.0,2.0,0.0,0.818,false,"NA"]
["TCGA-BRCA","TCGA-E2-A15K-11A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",17.0,0.0,1126.0,0.0,0.805764936191849,false,"NA"]
["TCGA-BRCA","TCGA-E2-A15R-01A","2:RPL37A:216500031:XRCC5:216204322:rev:+","RPL37A--XRCC5",1.0,0.0,1.0,0.0,0.927,false,"NA"]
["TCGA-BRCA","TCGA-E2-A1B0-01A","18:RBFA:80046332:+:14:GNPNAT1:52777081:-:fusion","RBFA--GNPNAT1",2.0,0.0,1.0,0.0,0.359,false,0.0175438596491]
["TCGA-BRCA","TCGA-E2-A1B5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.517,false,"NA"]
["TCGA-BRCA","TCGA-E2-A1B6-01A","1:PRCC:156800817:+:20:HAO1:7940474:-:fusion","PRCC--HAO1",3.0,190.0,14.0,7.0,0.256,true,0.0159817351598]
["TCGA-BRCA","TCGA-E2-A1IN-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",4.0,0.0,205.0,0.0,0.303,false,0.00342465753425]
["TCGA-BRCA","TCGA-E2-A1IO-01A","2:COL3A1:189010890:+:4:TMEM165:55418048:+:fusion","COL3A1--TMEM165",2.0,0.0,1.0,0.0,0.214,false,0.0368421052632]
["TCGA-BRCA","TCGA-E2-A1LB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.867,true,"NA"]
["TCGA-BRCA","TCGA-E2-A1LE-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.61,false,"NA"]
["TCGA-BRCA","TCGA-E2-A1LI-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",2.0,397.0,152.0,123.0,0.766,true,"NA"]
["TCGA-BRCA","TCGA-E2-A2P6-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",8.0,0.0,1758.0,0.0,0.546,false,"NA"]
["TCGA-BRCA","TCGA-E2-A573-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.569,false,"NA"]
["TCGA-BRCA","TCGA-E2-A574-01A","12:LINC01481:70242797:-:18:LINC01630:51465407:+:fusion","LINC01481--LINC01630",2.0,0.0,1.0,0.0,0.452,false,0.00314465408805]
["TCGA-BRCA","TCGA-E2-A576-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",25.0,9462.0,7336.0,7317.0,0.889872450035624,true,"NA"]
["TCGA-BRCA","TCGA-E9-A1N8-01A","19:PIP5K1C:3647338:-:19:C3:6719403:-:rev","PIP5K1C--C3",2.0,0.0,1.0,0.0,0.712,false,0.00766283524904]
["TCGA-BRCA","TCGA-E9-A1NC-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.568,false,"NA"]
["TCGA-BRCA","TCGA-E9-A1NG-01A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",1.0,13.0,47.0,11.0,0.653,false,0.00744878957169]
["TCGA-BRCA","TCGA-E9-A1QZ-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",1.0,198.0,115.0,72.0,0.852,false,"NA"]
["TCGA-BRCA","TCGA-E9-A1R7-11A","15:NEDD4:55993511:-:15:B2M:44715423:+:strandcross","NEDD4--B2M",1.0,0.0,1.0,0.0,0.941,false,0.00259067357513]
["TCGA-BRCA","TCGA-E9-A1RC-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",5.0,0.0,319.0,0.0,0.341,false,0.00352112676056]
["TCGA-BRCA","TCGA-E9-A1RF-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",6.0,5703.0,236.0,234.0,0.405,true,"NA"]
["TCGA-BRCA","TCGA-E9-A227-01A","2:CALM2:47160172:-:20:HM13:31567640:+:fusion","CALM2--HM13",3.0,0.0,17.0,0.0,0.256,false,0.0271084337349]
["TCGA-BRCA","TCGA-E9-A22D-01A","19:LYPD3:43465493:XRCC1:43561020:rev:-","LYPD3--XRCC1",1.0,0.0,1.0,0.0,0.952,false,"NA"]
["TCGA-BRCA","TCGA-E9-A22E-01A","X:COX7B:77901867:+:1:S100A13:153619038:-:fusion","COX7B--S100A13",1.0,366.0,1.0,1.0,0.686,true,0.0111111111111]
["TCGA-BRCA","TCGA-E9-A22H-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",17.0,915.0,236.0,214.0,0.727846161423123,true,"NA"]
["TCGA-BRCA","TCGA-E9-A3HO-01A","17:YWHAE:1400047:CRK:1437155:rev:-","YWHAE--CRK",1.0,26.0,63.0,13.0,0.861,false,"NA"]
["TCGA-BRCA","TCGA-E9-A3Q9-01A","11:SCGB1D2:62242362:+:22:IGLL5:22893697:+:fusion","SCGB1D2--IGLL5",2.0,0.0,1.0,0.0,0.285,false,0.0111420612813]
["TCGA-BRCA","TCGA-E9-A5FK-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",8.0,7.0,180.0,0.0,0.434,false,"NA"]
["TCGA-BRCA","TCGA-EW-A1IW-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",28.0,9462.0,7336.0,7317.0,0.874166123392382,true,"NA"]
["TCGA-BRCA","TCGA-EW-A1J1-01A","19:CALR:12940887:+:11:TRPT1:64224210:-:fusion","CALR--TRPT1",4.0,0.0,13.0,0.0,0.232,false,0.0143266475645]
["TCGA-BRCA","TCGA-EW-A1J3-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",13.0,4613.0,511.0,496.0,0.69,true,"NA"]
["TCGA-BRCA","TCGA-EW-A1P3-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",2.0,2011.0,360.0,280.0,0.442,true,"NA"]
["TCGA-BRCA","TCGA-EW-A1P4-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.716,true,0.00497512437811]
["TCGA-BRCA","TCGA-EW-A1PB-01A","4:SHROOM3:76586469:+:4:AC058822.1:53379073:+:rev","SHROOM3--AC058822.1",1.0,0.0,1.0,0.0,0.578,false,0.00778210116732]
["TCGA-BRCA","TCGA-EW-A1PH-01A","1:CCDC30:42482816:+:1:FOXJ3:42182024:-:strandcross","CCDC30--FOXJ3",1.0,0.0,1.0,0.0,0.932,false,0.0]
["TCGA-BRCA","TCGA-EW-A3E8-01B","9:FAM120AOS:93448369:-:10:LINC00993:37314378:+:fusion","FAM120AOS--LINC00993",5.0,110.0,1.0,1.0,0.352,true,0.00720720720721]
["TCGA-BRCA","TCGA-EW-A6S9-01A","2:TTC31:74483410:MTHFD2:74205705:rev:+","TTC31--MTHFD2",2.0,0.0,1.0,0.0,0.508,false,"NA"]
["TCGA-BRCA","TCGA-EW-A6SC-01A","19:AC022154.1:48620799:TEAD2:49341437:rev:-","AC022154.1--TEAD2",1.0,86.0,18.0,4.0,0.813,true,"NA"]
["TCGA-BRCA","TCGA-GI-A2C9-01A","11:MCAM:119311090:-:22:TRABD:50199116:+:fusion","MCAM--TRABD",5.0,0.0,9.0,0.0,0.458,false,0.0149253731343]
["TCGA-BRCA","TCGA-GM-A2DD-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",15.0,5703.0,236.0,234.0,0.864,true,"NA"]
["TCGA-BRCA","TCGA-GM-A2DL-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.911,true,"NA"]
["TCGA-BRCA","TCGA-GM-A2DN-01A","3:LTF:46436019:-:1:HMGN2:26472477:+:fusion","LTF--HMGN2",4.0,0.0,2.0,0.0,0.516,false,0.0133333333333]
["TCGA-BRCA","TCGA-GM-A5PV-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",18.0,0.0,1499.0,0.0,0.463766568561294,false,0.00367647058824]
["TCGA-BRCA","TCGA-GM-A5PX-01A","21:S100B:46598962:-:12:TCTN1:110644708:+:fusion","S100B--TCTN1",3.0,0.0,29.0,0.0,0.468,false,0.010752688172]
["TCGA-BRCA","TCGA-LD-A66U-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",44.0,915.0,236.0,214.0,0.859607615920168,true,"NA"]
["TCGA-BRCA","TCGA-LL-A50Y-01A","14:WDR20:102140172:PPP2R5C:101882161:rev:+","WDR20--PPP2R5C",1.0,0.0,1.0,0.0,0.895,false,"NA"]
["TCGA-BRCA","TCGA-LL-A5YO-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",5.0,29.0,70.0,0.0,0.491,false,"NA"]
["TCGA-BRCA","TCGA-LL-A6FQ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.693,false,"NA"]
["TCGA-BRCA","TCGA-LL-A6FQ-01A","7:HSPB1:76303865:+:17:GRN:44352202:+:fusion","HSPB1--GRN",5.0,0.0,3.0,0.0,0.198,false,0.0147329650092]
["TCGA-BRCA","TCGA-OK-A5Q2-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",4.0,2061.0,160.0,157.0,0.473,true,"NA"]
["TCGA-BRCA","TCGA-OL-A5D6-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.276,false,0.0049504950495]
["TCGA-BRCA","TCGA-OL-A5RU-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",2.0,4613.0,511.0,496.0,0.439,true,"NA"]
["TCGA-BRCA","TCGA-OL-A5RW-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.673,true,"NA"]
["TCGA-BRCA","TCGA-OL-A66I-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",2.0,2732.0,181.0,181.0,0.475,true,"NA"]
["TCGA-BRCA","TCGA-OL-A66K-01A","1:PYGO2:154957026:GON4L:155784389:rev:-","PYGO2--GON4L",2.0,4067.0,204.0,203.0,0.401,true,"NA"]
["TCGA-BRCA","TCGA-OL-A66P-01A","3:LMLN:197980504:RPL35A:197954003:rev:+","LMLN--RPL35A",1.0,1.0,3.0,1.0,0.819,false,"NA"]
["TCGA-BRCA","TCGA-OL-A6VQ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.741,true,"NA"]
["TCGA-BRCA","TCGA-PE-A5DD-01A","8:KAT6A:41929479:PLAT:42193727:rev:-","KAT6A--PLAT",3.0,1310.0,32.0,23.0,0.436,true,"NA"]
["TCGA-BRCA","TCGA-S3-A6ZF-01A","8:PLPBP:37762758:ERLIN2:37744355:rev:+","PLPBP--ERLIN2",2.0,0.0,1.0,0.0,0.796,false,"NA"]
["TCGA-BRCA","TCGA-S3-AA17-01A","12:PPP1R12A:79775923:-:5:CAST:96695836:+:fusion","PPP1R12A--CAST",3.0,5304.0,2.0,1.0,0.258,true,0.0302197802198]
["TCGA-BRCA","TCGA-V7-A7HQ-01A","22:NF2:29604112:+:22:EIF3D:36511786:-:strandcross","NF2--EIF3D",2.0,0.0,1.0,0.0,0.844,false,0.0]
["TCGA-BRCA","TCGA-XX-A899-01A","15:CCPG1:55348332:DNAAF4:55430779:rev:-","CCPG1--DNAAF4",1.0,0.0,1.0,0.0,0.925,false,"NA"]
["TCGA-CESC","TCGA-C5-A0TN-01A","8:CTSB:11847052:-:3:RNF123:49716393:+:fusion","CTSB--RNF123",2.0,0.0,1.0,0.0,0.396,false,0.00395778364116]
["TCGA-CESC","TCGA-C5-A1BF-01B","12:CPM:68855981:-:6:FLOT1:30740798:-:fusion","CPM--FLOT1",2.0,0.0,7.0,0.0,0.157,false,0.0323450134771]
["TCGA-CESC","TCGA-C5-A1BN-01B","12:KRT5:52516690:-:17:FLII:18254630:-:fusion","KRT5--FLII",2.0,4.0,3.0,0.0,0.527,false,0.00705882352941]
["TCGA-CESC","TCGA-C5-A1M8-01A","10:PDCD4:110876070:SMC3:110604231:rev:+","PDCD4--SMC3",1.0,0.0,1.0,0.0,0.829,false,"NA"]
["TCGA-CESC","TCGA-C5-A1MH-01A","15:AC124312.1:24982437:SNURF:24962114:rev:+","AC124312.1--SNURF",1.0,19.0,48.0,10.0,0.896,false,"NA"]
["TCGA-CESC","TCGA-C5-A1ML-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.409,true,"NA"]
["TCGA-CESC","TCGA-C5-A1MN-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",5.0,0.0,98.0,0.0,0.156,false,0.011673151751]
["TCGA-CESC","TCGA-C5-A2LX-01A","11:ZBED5:10857862:GALNT18:11293193:rev:-","ZBED5--GALNT18",1.0,0.0,1.0,0.0,0.971,false,"NA"]
["TCGA-CESC","TCGA-C5-A2LZ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.433,false,"NA"]
["TCGA-CESC","TCGA-C5-A3HL-01A","12:KRT5:52515798:-:12:ISCU:108564279:+:strandcross","KRT5--ISCU",1.0,0.0,1.0,0.0,0.757,false,0.00588235294118]
["TCGA-CESC","TCGA-C5-A7CH-01A","17:SOX15:7588178:MYH10:8493898:rev:-","SOX15--MYH10",3.0,20.0,2.0,0.0,0.422,false,"NA"]
["TCGA-CESC","TCGA-C5-A7X5-01A","6:TBP:170561910:+:7:FOXP2:114631531:+:fusion","TBP--FOXP2",1.0,2115.0,3.0,1.0,0.857,false,0.00290697674419]
["TCGA-CESC","TCGA-C5-A8XH-01A","17:GGA3:75261548:GRB2:75332797:rev:-","GGA3--GRB2",1.0,0.0,2.0,0.0,0.887,false,"NA"]
["TCGA-CESC","TCGA-C5-A8YT-01A","19:CNN2:1037000:+:15:MYO1E:59188216:-:fusion","CNN2--MYO1E",1.0,242.0,6.0,1.0,0.928,false,0.0]
["TCGA-CESC","TCGA-DG-A2KH-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",12.0,7.0,180.0,0.0,0.424,false,"NA"]
["TCGA-CESC","TCGA-DR-A0ZL-01A","10:ANAPC16:72233615:+:19:AC008655.1:50310539:-:fusion","ANAPC16--AC008655.1",9.0,13.0,3.0,0.0,0.679,false,0.0014684287812]
["TCGA-CESC","TCGA-DS-A0VL-01A","12:METTL7A:50930422:+:1:ELF3:202015209:+:fusion","METTL7A--ELF3",3.0,1761.0,1.0,1.0,0.284,true,0.0107142857143]
["TCGA-CESC","TCGA-DS-A1OA-01A","11:EIF4G2:10797816:-:19:SLC1A5:46788594:-:fusion","EIF4G2--SLC1A5",2.0,0.0,1.0,0.0,0.387,false,0.019298245614]
["TCGA-CESC","TCGA-DS-A1OD-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",7.0,6005.0,679.0,674.0,0.564,true,"NA"]
["TCGA-CESC","TCGA-DS-A3LQ-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",4.0,0.0,182.0,0.0,0.418,false,"NA"]
["TCGA-CESC","TCGA-EA-A1QS-01A","9:B4GALT1:33166758:BAG1:33262830:rev:-","B4GALT1--BAG1",76.0,21.0,35.0,10.0,0.923189762088923,true,"NA"]
["TCGA-CESC","TCGA-EA-A3HR-01A","13:ATP7B:51934604:-:11:AP002990.1:62572742:-:fusion","ATP7B--AP002990.1",4.0,0.0,1.0,0.0,0.283,false,0.0159362549801]
["TCGA-CESC","TCGA-EA-A3QD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.971,true,"NA"]
["TCGA-CESC","TCGA-EA-A3QD-01A","6:HLA-E:30489595:+:6:HLA-B:31356957:-:strandcross","HLA-E--HLA-B",4.0,10194.0,137.0,137.0,0.17,true,0.0179948586118]
["TCGA-CESC","TCGA-EA-A43B-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",4.0,2061.0,160.0,157.0,0.737,true,"NA"]
["TCGA-CESC","TCGA-EA-A44S-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.957,true,"NA"]
["TCGA-CESC","TCGA-EA-A50E-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",4.0,821.0,85.0,71.0,0.485,true,"NA"]
["TCGA-CESC","TCGA-EA-A5ZD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.711,false,"NA"]
["TCGA-CESC","TCGA-EK-A2H0-01A","16:HSF4:67169941:AC018557.1:66720897:rev:+","HSF4--AC018557.1",7.0,0.0,168.0,0.0,0.459,false,"NA"]
["TCGA-CESC","TCGA-EK-A2IP-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",3.0,315.0,342.0,224.0,0.999,true,0.0]
["TCGA-CESC","TCGA-EK-A2PG-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",3.0,0.0,260.0,0.0,0.198,false,0.0168067226891]
["TCGA-CESC","TCGA-EK-A2R9-01A","19:CALR:12943756:+:10:ZWINT:56359532:-:fusion","CALR--ZWINT",4.0,0.0,3.0,0.0,0.395,false,0.00886917960089]
["TCGA-CESC","TCGA-EK-A2RA-01A","9:FAM129B:127507184:-:11:RPLP2:810269:+:fusion","FAM129B--RPLP2",2.0,0.0,1.0,0.0,0.638,false,0.00155520995334]
["TCGA-CESC","TCGA-EK-A2RK-01A","21:SCAF4:31685049:-:16:CHMP1A:89647331:-:fusion","SCAF4--CHMP1A",1.0,27.0,10.0,1.0,0.652,false,0.0015503875969]
["TCGA-CESC","TCGA-EK-A2RN-01A","3:TTLL3:9836315:+:11:MUC5B:1255383:+:fusion","TTLL3--MUC5B",3.0,0.0,1.0,0.0,0.173,false,0.0309734513274]
["TCGA-CESC","TCGA-EK-A3GN-01A","19:ZNF574:42081549:AC243960.1:41554951:rev:+","ZNF574--AC243960.1",2.0,0.0,90.0,0.0,0.443,false,"NA"]
["TCGA-CESC","TCGA-EX-A1H6-01B","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",4.0,2732.0,181.0,181.0,0.431,true,"NA"]
["TCGA-CESC","TCGA-EX-A69M-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",3.0,5352.0,117.0,117.0,0.565,true,"NA"]
["TCGA-CESC","TCGA-FU-A2QG-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",3.0,2439.0,257.0,256.0,0.466,true,"NA"]
["TCGA-CESC","TCGA-FU-A3EO-01A","7:NDUFA4:10940016:-:7:PHF14:11111350:+:strandcross","NDUFA4--PHF14",2.0,65.0,57.0,30.0,0.96,false,0.0]
["TCGA-CESC","TCGA-FU-A3TX-01A","5:MATR3:139293805:CTNNA1:138810038:rev:+","MATR3--CTNNA1",1.0,11.0,42.0,6.0,0.927,false,"NA"]
["TCGA-CESC","TCGA-FU-A5XV-01A","1:MIR205HG:209430476:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,8.0,35.0,4.0,0.706,false,0.0043956043956]
["TCGA-CESC","TCGA-HM-A3JJ-01A","6:HLA-C:31271073:-:12:TIMELESS:56431604:-:fusion","HLA-C--TIMELESS",3.0,0.0,1.0,0.0,0.212,false,0.0265306122449]
["TCGA-CESC","TCGA-HM-A3JK-01A","1:ARHGEF10L:17664595:CROCC:16929846:rev:+","ARHGEF10L--CROCC",1.0,0.0,1.0,0.0,0.896,false,"NA"]
["TCGA-CESC","TCGA-IR-A3LC-01A","18:NAPG:10526158:RAB31:9859228:rev:+","NAPG--RAB31",1.0,3.0,4.0,0.0,0.861,false,"NA"]
["TCGA-CESC","TCGA-IR-A3LI-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.509,true,"NA"]
["TCGA-CESC","TCGA-JW-A5VG-01A","3:TFDP2:141963812:-:16:LONP2:48356449:+:fusion","TFDP2--LONP2",8.0,0.0,6.0,0.0,0.225,false,0.0120967741935]
["TCGA-CESC","TCGA-JW-A5VJ-01A","11:CD44:35229244:+:15:PLA2G4B:41846203:+:fusion","CD44--PLA2G4B",2.0,0.0,1.0,0.0,0.234,false,0.0138067061144]
["TCGA-CESC","TCGA-JW-A852-01A","17:TP53:7668421:MYH10:8493898:rev:-","TP53--MYH10",4.0,0.0,55.0,0.0,0.536,false,"NA"]
["TCGA-CESC","TCGA-JX-A3PZ-01A","2:COX5B:97647443:+:2:GPC1:240466058:+:reg","COX5B--GPC1",2.0,0.0,1.0,0.0,0.333,false,0.00837520938023]
["TCGA-CESC","TCGA-JX-A5QV-01A","3:AC078785.2:113058946:CCDC191:114005962:rev:-","AC078785.2--CCDC191",3.0,320.0,6.0,5.0,0.719,false,"NA"]
["TCGA-CESC","TCGA-LP-A5U2-01A","5:RPL37:40834181:-:19:RPL28:55386767:+:fusion","RPL37--RPL28",2.0,0.0,4.0,0.0,0.219,false,0.0240480961924]
["TCGA-CESC","TCGA-MA-AA3W-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.829,true,"NA"]
["TCGA-CESC","TCGA-MU-A5YI-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.675,false,"NA"]
["TCGA-CESC","TCGA-MY-A5BD-01A","12:CPSF6:69262562:+:9:C9orf3:95086682:+:fusion","CPSF6--C9orf3",3.0,134.0,130.0,48.0,0.804,true,0.00169204737733]
["TCGA-CESC","TCGA-Q1-A5R1-01A","9:RPS6:19378368:-:6:MIR6891:31355316:-:fusion","RPS6--MIR6891",2.0,0.0,2.0,0.0,0.247,false,0.0190839694656]
["TCGA-CESC","TCGA-Q1-A5R2-01A","17:TP53:7687377:-:17:GAS7:9925599:-:rev","TP53--GAS7",1.0,0.0,1.0,0.0,0.604,false,0.00330578512397]
["TCGA-CESC","TCGA-Q1-A6DW-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.517,false,"NA"]
["TCGA-CESC","TCGA-Q1-A73R-01A","7:GATS:100222597:-:7:PILRB:100355143:+:strandcross","GATS--PILRB",1.0,53.0,58.0,20.0,0.902,false,0.00141843971631]
["TCGA-CESC","TCGA-UC-A7PG-06A","17:ACTG1:81509988:-:17:KRT13:41504576:-:reg","ACTG1--KRT13",9.0,0.0,2.0,0.0,0.256,false,0.0358974358974]
["TCGA-CESC","TCGA-VS-A8EC-01A","15:CEP152:48717018:FAM227B:49371399:rev:-","CEP152--FAM227B",1.0,0.0,1.0,0.0,0.967,false,"NA"]
["TCGA-CESC","TCGA-VS-A8EG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.78,true,"NA"]
["TCGA-CESC","TCGA-VS-A8Q9-01A","17:ERBB2:39713269:+:8:PVT1:128009590:+:fusion","ERBB2--PVT1",3.0,1149.0,78.0,36.0,0.22,false,0.00520833333333]
["TCGA-CESC","TCGA-VS-A8QH-01A","3:EIF4A2:186784696:DNAJB11:186582716:rev:+","EIF4A2--DNAJB11",1.0,2.0,2.0,1.0,0.954,false,"NA"]
["TCGA-CESC","TCGA-VS-A953-01A","1:S100A6:153535202:S100A2:153561591:rev:-","S100A6--S100A2",1.0,0.0,1.0,0.0,0.869,false,"NA"]
["TCGA-CESC","TCGA-VS-A9UC-01A","10:LHPP:124614141:+:16:JPT2:1700074:+:fusion","LHPP--JPT2",3.0,0.0,1.0,0.0,0.2,false,0.0174418604651]
["TCGA-CESC","TCGA-VS-A9UM-01A","21:AP000561.1:22212813:NCAM2:21477291:rev:+","AP000561.1--NCAM2",1.0,0.0,1.0,0.0,0.905,false,"NA"]
["TCGA-CESC","TCGA-VS-A9UP-01A","1:ZDHHC18:26827139:ARID1A:26772500:rev:+","ZDHHC18--ARID1A",2.0,0.0,1.0,0.0,0.466,false,"NA"]
["TCGA-CESC","TCGA-VS-AA62-01A","15:B2M:44716356:+:14:DYNC1H1:102050071:+:fusion","B2M--DYNC1H1",2.0,0.0,17.0,0.0,0.394,false,0.0164473684211]
["TCGA-CESC","TCGA-XS-A8TJ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.419,false,"NA"]
["TCGA-CESC","TCGA-ZJ-AAXI-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,1126.0,0.0,0.435,false,"NA"]
["TCGA-CESC","TCGA-ZJ-AAXU-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.844,true,"NA"]
["TCGA-CHOL","TCGA-4G-AAZT-01A","1:ID3:23557934:-:2:ATP5G3:175184607:-:fusion","ID3--ATP5G3",3.0,0.0,1.0,0.0,0.224,false,0.00248756218905]
["TCGA-CHOL","TCGA-W5-AA2Q-01A","X:FLNA:154354151:-:10:VIM:17234693:+:fusion","FLNA--VIM",2.0,0.0,1.0,0.0,0.186,false,0.0135135135135]
["TCGA-CHOL","TCGA-W5-AA2U-01A","11:AP001636.3:59051260:PATL1:59653018:rev:-","AP001636.3--PATL1",1.0,0.0,1.0,0.0,0.834,false,"NA"]
["TCGA-CHOL","TCGA-W5-AA33-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.348,false,0.0132450331126]
["TCGA-CHOL","TCGA-W6-AA0S-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.42,true,"NA"]
["TCGA-COAD","TCGA-4N-A93T-01A","17:ERBB2:39713269:+:8:PVT1:128009590:+:fusion","ERBB2--PVT1",3.0,1149.0,78.0,36.0,0.196,true,0.00478468899522]
["TCGA-COAD","TCGA-A6-2674-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.456,false,"NA"]
["TCGA-COAD","TCGA-A6-2677-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.552,false,0.0198675496689]
["TCGA-COAD","TCGA-A6-2678-11A","11:RPLP2:812871:+:19:P2RY11:10112104:+:fusion","RPLP2--P2RY11",7.0,5819.0,29.0,16.0,0.325,true,0.0142276422764]
["TCGA-COAD","TCGA-A6-2683-11A","19:ZNF738:21375964:ZNF430:21056631:rev:+","ZNF738--ZNF430",1.0,3551.0,102.0,73.0,0.856,false,"NA"]
["TCGA-COAD","TCGA-A6-2685-11A","1:ENO1:8861005:-:19:RFX1:13993895:-:fusion","ENO1--RFX1",6.0,5.0,1.0,0.0,0.227,false,0.0219298245614]
["TCGA-COAD","TCGA-A6-3810-01B","13:LMO7:75727098:AL137782.1:75621763:rev:+","LMO7--AL137782.1",4.0,40.0,23.0,19.0,0.937,true,"NA"]
["TCGA-COAD","TCGA-A6-5657-01A","12:GCN1:120153213:RPLP0:120197462:rev:-","GCN1--RPLP0",1.0,0.0,1.0,0.0,0.929,false,"NA"]
["TCGA-COAD","TCGA-A6-5659-01A","16:AC009119.2:83912367:MLYCD:83906987:rev:+","AC009119.2--MLYCD",2.0,26.0,17.0,13.0,0.438,true,"NA"]
["TCGA-COAD","TCGA-A6-5661-01B","12:PGAM5:132718120:AC135586.2:132714858:rev:+","PGAM5--AC135586.2",2.0,1.0,3.0,0.0,0.685,false,"NA"]
["TCGA-COAD","TCGA-A6-5665-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.719,true,"NA"]
["TCGA-COAD","TCGA-A6-6138-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.502,false,0.0]
["TCGA-COAD","TCGA-A6-6650-01A","13:LMO7:75727098:AL137782.1:75621763:rev:+","LMO7--AL137782.1",8.0,40.0,23.0,19.0,0.72,true,"NA"]
["TCGA-COAD","TCGA-A6-6780-01A","19:KXD1:18569378:KCNN1:17989716:rev:+","KXD1--KCNN1",2.0,0.0,8.0,0.0,0.448,false,"NA"]
["TCGA-COAD","TCGA-A6-6780-01A","2:EPCAM:47387601:+:21:SOD1:31659693:+:fusion","EPCAM--SOD1",2.0,39.0,4.0,0.0,0.423,false,0.0132625994695]
["TCGA-COAD","TCGA-AA-3492-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.984,true,"NA"]
["TCGA-COAD","TCGA-AA-3502-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",8.0,0.0,1758.0,0.0,0.641,false,"NA"]
["TCGA-COAD","TCGA-AA-3516-11A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",3.0,2011.0,360.0,280.0,0.469,true,"NA"]
["TCGA-COAD","TCGA-AA-3531-11A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",2.0,915.0,236.0,214.0,0.45,true,"NA"]
["TCGA-COAD","TCGA-AA-3675-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.827,true,"NA"]
["TCGA-COAD","TCGA-AA-3712-11A","12:PAN2:56333862:STAT2:56346203:rev:-","PAN2--STAT2",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-COAD","TCGA-AA-3713-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.535,true,"NA"]
["TCGA-COAD","TCGA-AD-6889-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.527,true,"NA"]
["TCGA-COAD","TCGA-AD-6963-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.334,false,0.00389105058366]
["TCGA-COAD","TCGA-AY-6196-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.87,true,"NA"]
["TCGA-COAD","TCGA-AY-A71X-01A","8:VPS13B:99809530:+:8:RGS22:100080355:-:strandcross","VPS13B--RGS22",1.0,0.0,1.0,0.0,0.781,false,0.00325732899023]
["TCGA-COAD","TCGA-AZ-5403-01A","16:IL32:3065494:TSC2:2079032:rev:+","IL32--TSC2",1.0,0.0,1.0,0.0,0.827,false,"NA"]
["TCGA-COAD","TCGA-AZ-6598-11A","9:SHC3:89052037:AL353150.1:89088935:rev:-","SHC3--AL353150.1",2.0,0.0,1.0,0.0,0.649,false,"NA"]
["TCGA-COAD","TCGA-AZ-6600-01A","1:CAP1:40072271:+:11:TMPRSS4:118107774:+:fusion","CAP1--TMPRSS4",12.0,1.0,121.0,0.0,0.251,false,0.0142348754448]
["TCGA-COAD","TCGA-AZ-6606-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",27.0,1.0,1034.0,1.0,0.546950815703752,false,"NA"]
["TCGA-COAD","TCGA-CA-5796-01A","17:ACTG1:81510927:-:19:PRKCSH:11436389:+:fusion","ACTG1--PRKCSH",2.0,1.0,2.0,0.0,0.259,false,0.025641025641]
["TCGA-COAD","TCGA-CK-4948-01B","11:C11orf80:66762450:+:17:C1QBP:5439155:-:fusion","C11orf80--C1QBP",1.0,3.0,11.0,1.0,0.816,false,0.0]
["TCGA-COAD","TCGA-CK-4950-01A","4:MRFAP1:6641258:+:3:CNBP:129171538:-:fusion","MRFAP1--CNBP",9.0,0.0,86.0,0.0,0.399,false,0.0119760479042]
["TCGA-COAD","TCGA-CM-4744-01A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",2.0,2223.0,62.0,62.0,0.452,true,"NA"]
["TCGA-COAD","TCGA-CM-4747-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.647,true,"NA"]
["TCGA-COAD","TCGA-CM-5863-01A","14:CKB:103522023:-:11:CD151:837942:+:fusion","CKB--CD151",2.0,0.0,3.0,0.0,0.345,false,0.0148698884758]
["TCGA-COAD","TCGA-CM-6163-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",4.0,1.0,1034.0,1.0,0.56,false,"NA"]
["TCGA-COAD","TCGA-CM-6171-01A","15:TMEM87A:42211139:-:4:EGF:109912891:+:fusion","TMEM87A--EGF",5.0,0.0,1.0,0.0,0.16,false,0.02]
["TCGA-COAD","TCGA-CM-6678-01A","17:SNX11:48112873:NPEPPS:47618350:rev:+","SNX11--NPEPPS",1.0,69.0,17.0,3.0,0.926,false,"NA"]
["TCGA-COAD","TCGA-D5-5541-01A","6:HLA-E:30492583:HLA-A:29945451:rev:+","HLA-E--HLA-A",2.0,9531.0,39.0,39.0,0.776,true,"NA"]
["TCGA-COAD","TCGA-D5-6532-01A","1:SNHG3:28508160:+:7:ICA1:8143972:-:fusion","SNHG3--ICA1",2.0,22.0,2.0,1.0,0.937,true,0.0]
["TCGA-COAD","TCGA-D5-6537-01A","7:AGK:141555567:NDUFB2:140702866:rev:+","AGK--NDUFB2",1.0,14.0,20.0,5.0,0.992,false,"NA"]
["TCGA-COAD","TCGA-D5-6923-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",4.0,1.0,1034.0,1.0,0.588,false,"NA"]
["TCGA-COAD","TCGA-D5-7000-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",6.0,915.0,236.0,214.0,0.591,true,"NA"]
["TCGA-COAD","TCGA-DM-A0XF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.814,true,"NA"]
["TCGA-COAD","TCGA-DM-A1D4-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",6.0,6005.0,679.0,674.0,0.52,true,"NA"]
["TCGA-COAD","TCGA-DM-A1HA-01A","13:TPT1:45340712:-:1:FBXO2:11650074:-:fusion","TPT1--FBXO2",1.0,0.0,1.0,0.0,0.805,false,0.0019120458891]
["TCGA-COAD","TCGA-DM-A280-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",3.0,2722.0,255.0,144.0,0.404,true,"NA"]
["TCGA-COAD","TCGA-DM-A28E-01A","20:PTPRA:3021428:+:7:PDIA4:149006053:-:fusion","PTPRA--PDIA4",4.0,0.0,32.0,0.0,0.166,false,0.0314136125654]
["TCGA-COAD","TCGA-F4-6460-01A","15:RAB27A:55314039:NEDD4:55874008:rev:-","RAB27A--NEDD4",1.0,15.0,11.0,3.0,0.936,false,"NA"]
["TCGA-COAD","TCGA-F4-6704-01A","12:PCBP2-OT1:53465057:+:17:AC145207.2:81867722:+:fusion","PCBP2-OT1--AC145207.2",2.0,9198.0,1.0,1.0,0.154,true,0.026399155227]
["TCGA-COAD","TCGA-F4-6809-01A","1:HS2ST1:86915160:+:1:AC093580.1:82215772:-:strandcross","HS2ST1--AC093580.1",1.0,0.0,1.0,0.0,0.9,false,0.00194552529183]
["TCGA-COAD","TCGA-F4-6856-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.415,false,"NA"]
["TCGA-COAD","TCGA-G4-6303-01A","8:EPPK1:143878438:CYHR1:144453460:rev:-","EPPK1--CYHR1",2.0,0.0,2.0,0.0,0.734,false,"NA"]
["TCGA-COAD","TCGA-G4-6311-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",6.0,0.0,423.0,0.0,0.42,false,"NA"]
["TCGA-COAD","TCGA-G4-6586-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.646,false,"NA"]
["TCGA-COAD","TCGA-G4-6626-01A","14:DCAF5:69116366:AL359317.2:69184497:rev:-","DCAF5--AL359317.2",1.0,0.0,1.0,0.0,0.971,false,"NA"]
["TCGA-COAD","TCGA-QG-A5YW-01A","1:SELENOF:86914028:-:1:HS2ST1:87072934:+:strandcross","SELENOF--HS2ST1",1.0,1.0,9.0,1.0,0.909,false,0.0]
["TCGA-COAD","TCGA-RU-A8FL-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.412,false,"NA"]
["TCGA-COAD","TCGA-T9-A92H-01A","12:COX6A1:120438810:+:19:AC008655.1:50310539:-:fusion","COX6A1--AC008655.1",5.0,2798.0,10.0,6.0,0.762,true,0.00313479623824]
["TCGA-DLBC","TCGA-FA-A6HN-01A","20:CTNNBL1:37872128:RPN2:37223878:rev:+","CTNNBL1--RPN2",2.0,0.0,1.0,0.0,0.437,false,"NA"]
["TCGA-DLBC","TCGA-FA-A82F-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",4.0,7942.0,781.0,771.0,0.576,true,0.0129032258065]
["TCGA-DLBC","TCGA-FF-8042-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",4.0,5022.0,244.0,241.0,0.493,true,"NA"]
["TCGA-DLBC","TCGA-FF-8047-01A","19:AKT2:40232335:C19orf47:40343805:rev:-","AKT2--C19orf47",2.0,0.0,47.0,0.0,0.518,false,"NA"]
["TCGA-DLBC","TCGA-FF-8047-01A","5:MAT2B:163519149:+:19:PGPEP1:18369706:+:fusion","MAT2B--PGPEP1",4.0,0.0,1.0,0.0,0.164,false,0.0202247191011]
["TCGA-DLBC","TCGA-FF-8062-01A","16:CORO1A:30189034:+:14:C14orf80:105489876:+:fusion","CORO1A--C14orf80",3.0,0.0,1.0,0.0,0.212,false,0.0179948586118]
["TCGA-DLBC","TCGA-G8-6324-01A","16:CHMP1A:89645955:-:14:IGHM:105855815:-:fusion","CHMP1A--IGHM",3.0,0.0,1.0,0.0,0.158,false,0.0263157894737]
["TCGA-DLBC","TCGA-G8-6325-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",10.0,8277.0,230.0,230.0,0.79,true,"NA"]
["TCGA-DLBC","TCGA-G8-6906-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",9.0,6005.0,679.0,674.0,0.58,true,"NA"]
["TCGA-DLBC","TCGA-G8-6907-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",11.0,6005.0,679.0,674.0,0.93,true,"NA"]
["TCGA-DLBC","TCGA-GR-7351-01A","17:RPL23:38850362:-:11:STARD10:72759309:-:fusion","RPL23--STARD10",3.0,0.0,1.0,0.0,0.152,false,0.0244648318043]
["TCGA-DLBC","TCGA-GR-7353-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.911,true,"NA"]
["TCGA-DLBC","TCGA-GR-A4D6-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.877,true,"NA"]
["TCGA-DLBC","TCGA-GS-A9TW-01A","12:SBNO1:123323680:EIF2B1:123627156:rev:-","SBNO1--EIF2B1",1.0,0.0,1.0,0.0,0.959,false,"NA"]
["TCGA-DLBC","TCGA-RQ-A6JB-01A","6:BTN3A3:26450133:BTN3A1:26412412:rev:+","BTN3A3--BTN3A1",2.0,2659.0,122.0,88.0,0.7,true,"NA"]
["TCGA-ESCA","TCGA-2H-A9GI-01A","13:RB1:48381443:ITM2B:48253808:rev:+","RB1--ITM2B",2.0,28.0,53.0,14.0,0.93,true,"NA"]
["TCGA-ESCA","TCGA-IG-A3YC-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,315.0,342.0,224.0,0.973,false,0.0]
["TCGA-ESCA","TCGA-JY-A6F8-01A","12:C12orf76:110044420:PPP1CC:110731901:rev:-","C12orf76--PPP1CC",2.0,252.0,6.0,4.0,0.423,true,"NA"]
["TCGA-ESCA","TCGA-JY-A6FE-01A","7:STAG3L5P-PVRIG2P-PILRB:100338889:+:7:GATS:100213133:-:strandcross","STAG3L5P-PVRIG2P-PILRB--GATS",1.0,24.0,16.0,5.0,0.779,false,0.0]
["TCGA-ESCA","TCGA-L5-A4OQ-01A","9:RXRA:134421805:WDR5:134157893:rev:+","RXRA--WDR5",1.0,0.0,1.0,0.0,0.978,false,"NA"]
["TCGA-ESCA","TCGA-L5-A88V-01A","20:AL391095.2:38378872:+:2:AC074117.1:27367424:+:fusion","AL391095.2--AC074117.1",3.0,60.0,1.0,1.0,0.458,true,0.0]
["TCGA-ESCA","TCGA-LN-A49M-01A","2:MCFD2:46910780:-:3:TP63:189886394:+:fusion","MCFD2--TP63",2.0,3.0,1.0,1.0,0.157,true,0.0433694745621]
["TCGA-ESCA","TCGA-LN-A49W-01A","6:HLA-B:31355522:-:6:HLA-F:29724173:+:strandcross","HLA-B--HLA-F",1.0,2.0,2.0,0.0,0.829,false,8.32639467111E-4]
["TCGA-ESCA","TCGA-LN-A5U5-01A","12:AC138466.1:132190333:NOC4L:132150981:rev:+","AC138466.1--NOC4L",1.0,0.0,5.0,0.0,0.974,false,"NA"]
["TCGA-ESCA","TCGA-Q9-A6FU-01A","17:TRAF4:28744255:SUPT6H:28678076:rev:+","TRAF4--SUPT6H",1.0,0.0,1.0,0.0,0.843,false,"NA"]
["TCGA-ESCA","TCGA-R6-A8W5-01B","12:BRI3BP:124994003:+:12:UBC:124913774:-:strandcross","BRI3BP--UBC",4.0,170.0,56.0,45.0,0.599,true,0.00229357798165]
["TCGA-ESCA","TCGA-V5-A7RE-11A","17:ERBB2:39715939:+:17:JUP:41755432:-:strandcross","ERBB2--JUP",7.0,56.0,33.0,26.0,0.96,true,0.0]
["TCGA-GBM","TCGA-06-0141-01A","2:ANKAR:189720787:ASNSD1:189670441:rev:+","ANKAR--ASNSD1",1.0,0.0,1.0,0.0,0.842,false,"NA"]
["TCGA-GBM","TCGA-06-0675-11A","14:CKB:103520122:-:2:KIF1A:240722658:-:fusion","CKB--KIF1A",3.0,0.0,5.0,0.0,0.235,false,0.0311614730878]
["TCGA-GBM","TCGA-06-0747-01A","18:ZNF532:58865579:NEDD4L:58165788:rev:+","ZNF532--NEDD4L",1.0,1.0,2.0,1.0,0.957,false,"NA"]
["TCGA-GBM","TCGA-06-AABW-11A","9:ABCA2:137010620:-:12:TUBA1A:49186458:-:fusion","ABCA2--TUBA1A",1.0,0.0,1.0,0.0,0.919,false,0.00269541778976]
["TCGA-GBM","TCGA-19-1390-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",19.0,2010.0,1976.0,1665.0,0.689553701235337,true,7.2202166065E-4]
["TCGA-GBM","TCGA-41-2572-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",27.0,2010.0,1976.0,1665.0,0.748520809045819,true,0.0]
["TCGA-HNSC","TCGA-BA-4074-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.72,true,"NA"]
["TCGA-HNSC","TCGA-BA-4078-01A","17:KRT17:41621627:-:19:PDCD5:32581232:+:fusion","KRT17--PDCD5",2.0,0.0,1.0,0.0,0.219,false,0.0108803165183]
["TCGA-HNSC","TCGA-BA-5151-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",3.0,0.0,260.0,0.0,0.445,false,0.00655737704918]
["TCGA-HNSC","TCGA-BA-5152-01A","3:NEK4:52770654:ITIH4:52814363:rev:-","NEK4--ITIH4",1.0,0.0,1.0,0.0,0.864,false,"NA"]
["TCGA-HNSC","TCGA-BA-5557-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.984,false,"NA"]
["TCGA-HNSC","TCGA-BA-5559-01A","17:TMEM104:74777738:+:19:IRF3:49663514:-:fusion","TMEM104--IRF3",3.0,276.0,5.0,1.0,0.86,true,0.00504201680672]
["TCGA-HNSC","TCGA-BA-6869-01A","16:AC009063.3:83716987:-:9:TMEM268:114643134:+:fusion","AC009063.3--TMEM268",2.0,584.0,43.0,16.0,0.442,false,0.00764818355641]
["TCGA-HNSC","TCGA-BA-6870-01A","14:BCL2L2:23308199:+:17:KRT13:41502594:-:fusion","BCL2L2--KRT13",2.0,0.0,1.0,0.0,0.492,false,0.0126103404792]
["TCGA-HNSC","TCGA-BA-A4IH-01A","X:EIF2S3:24057754:PRDX4:23674990:rev:+","EIF2S3--PRDX4",1.0,0.0,1.0,0.0,0.817,false,"NA"]
["TCGA-HNSC","TCGA-BA-A4II-01A","19:USF2:35269929:+:17:KRT14:41583921:-:fusion","USF2--KRT14",2.0,0.0,6.0,0.0,0.237,false,0.0117647058824]
["TCGA-HNSC","TCGA-BA-A6DG-01A","11:GRK2:67284983:ACTN3:66560573:rev:+","GRK2--ACTN3",2.0,0.0,55.0,0.0,0.486,false,"NA"]
["TCGA-HNSC","TCGA-BA-A6DL-01A","6:IGF2R:160103815:WTAP:159738990:rev:+","IGF2R--WTAP",1.0,0.0,1.0,0.0,0.977,false,"NA"]
["TCGA-HNSC","TCGA-BB-4217-01A","17:MYO1C:1491600:PITPNA:1558559:rev:-","MYO1C--PITPNA",1.0,14.0,20.0,6.0,0.864,false,"NA"]
["TCGA-HNSC","TCGA-BB-7861-01A","11:RPLP2:812871:+:19:P2RY11:10112104:+:fusion","RPLP2--P2RY11",7.0,5819.0,29.0,16.0,0.194,false,0.018018018018]
["TCGA-HNSC","TCGA-BB-7862-01A","2:GFPT1:69354489:NFU1:69400538:rev:-","GFPT1--NFU1",2.0,0.0,1.0,0.0,0.995,false,"NA"]
["TCGA-HNSC","TCGA-BB-7871-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",18.0,9462.0,7336.0,7317.0,0.855784030433566,false,"NA"]
["TCGA-HNSC","TCGA-BB-A5HU-01A","12:HMGA2:65951415:LINC02454:65612692:rev:+","HMGA2--LINC02454",1.0,0.0,1.0,0.0,0.987,false,"NA"]
["TCGA-HNSC","TCGA-C9-A480-01A","2:CAPG:85398720:-:12:KRT6A:52491736:-:fusion","CAPG--KRT6A",2.0,0.0,1.0,0.0,0.458,false,0.00693240901213]
["TCGA-HNSC","TCGA-CN-4727-01A","6:PPARD:35411217:ZNF76:35281056:rev:+","PPARD--ZNF76",1.0,0.0,1.0,0.0,0.971,false,"NA"]
["TCGA-HNSC","TCGA-CN-4730-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.593,false,"NA"]
["TCGA-HNSC","TCGA-CN-4731-01A","9:RPS6:19378708:-:20:PFDN4:54215300:+:fusion","RPS6--PFDN4",4.0,0.0,4.0,0.0,0.235,false,0.0226130653266]
["TCGA-HNSC","TCGA-CN-4736-01A","17:SPAG9:50964149:-:12:AC006064.4:6538370:-:fusion","SPAG9--AC006064.4",2.0,3.0,20.0,0.0,0.213,false,0.0152838427948]
["TCGA-HNSC","TCGA-CN-4739-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.485,false,"NA"]
["TCGA-HNSC","TCGA-CN-5356-01A","12:KDM5A:310885:-:7:ACTB:5527611:-:fusion","KDM5A--ACTB",3.0,0.0,1.0,0.0,0.411,false,0.0076103500761]
["TCGA-HNSC","TCGA-CN-5359-01A","19:PPP1R12C:55098784:-:19:CNN2:1036130:+:strandcross","PPP1R12C--CNN2",2.0,51.0,42.0,17.0,0.998,true,0.0]
["TCGA-HNSC","TCGA-CN-5365-01A","1:LMNA:156139317:+:12:IFT81:110162919:+:fusion","LMNA--IFT81",3.0,0.0,14.0,0.0,0.215,false,0.0791027154664]
["TCGA-HNSC","TCGA-CN-5369-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.481,false,"NA"]
["TCGA-HNSC","TCGA-CN-5369-01A","2:IGKC:88857161:-:9:AK3:4713096:-:fusion","IGKC--AK3",7.0,0.0,10.0,0.0,0.262,false,0.0148588410104]
["TCGA-HNSC","TCGA-CN-6012-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",4.0,0.0,495.0,0.0,0.438,false,"NA"]
["TCGA-HNSC","TCGA-CN-6016-01A","7:HSPB1:76304260:+:17:COL1A1:50194058:-:fusion","HSPB1--COL1A1",2.0,0.0,2.0,0.0,0.488,false,0.0114942528736]
["TCGA-HNSC","TCGA-CN-6020-01A","11:NDUFV1:67609852:+:17:AC145207.2:81867722:+:fusion","NDUFV1--AC145207.2",6.0,792.0,49.0,0.0,0.184,false,0.0285714285714]
["TCGA-HNSC","TCGA-CN-6023-01A","2:SMPD4:130159513:FAM168B:131071938:rev:-","SMPD4--FAM168B",3.0,2260.0,44.0,39.0,0.556,true,"NA"]
["TCGA-HNSC","TCGA-CN-6996-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",2.0,669.0,283.0,225.0,0.783,true,"NA"]
["TCGA-HNSC","TCGA-CN-6996-01A","2:GPC1:240466358:+:10:ANXA11:80163613:-:fusion","GPC1--ANXA11",7.0,0.0,5.0,0.0,0.194,false,0.0230769230769]
["TCGA-HNSC","TCGA-CN-6998-01A","20:PI3:45175001:+:17:KRT14:41583921:-:fusion","PI3--KRT14",1.0,0.0,1.0,0.0,0.692,false,0.00398936170213]
["TCGA-HNSC","TCGA-CN-A49B-01A","9:UBAC1:135932969:CCDC183-AS1:136808848:rev:-","UBAC1--CCDC183-AS1",8.0,0.0,40.0,0.0,0.521,false,"NA"]
["TCGA-HNSC","TCGA-CN-A642-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.598,true,"NA"]
["TCGA-HNSC","TCGA-CN-A6V7-01A","10:NEURL1:103585225:PDCD11:103438015:rev:+","NEURL1--PDCD11",1.0,0.0,1.0,0.0,0.807,false,"NA"]
["TCGA-HNSC","TCGA-CQ-5324-01A","12:PTMS:6769999:+:21:APP:26051032:-:fusion","PTMS--APP",2.0,0.0,1.0,0.0,0.484,false,0.0166666666667]
["TCGA-HNSC","TCGA-CQ-5331-01A","17:KRT19:41524843:KRT17:41621754:rev:-","KRT19--KRT17",2.0,1326.0,1.0,1.0,0.72,true,"NA"]
["TCGA-HNSC","TCGA-CQ-5334-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.75,true,"NA"]
["TCGA-HNSC","TCGA-CQ-6220-01A","7:LUC7L2:139409654:+:12:KRT6A:52493257:-:fusion","LUC7L2--KRT6A",3.0,0.0,3.0,0.0,0.426,false,0.00578871201158]
["TCGA-HNSC","TCGA-CQ-6223-01A","2:XRCC5:216162048:+:12:KRT6A:52491736:-:fusion","XRCC5--KRT6A",1.0,0.0,1.0,0.0,0.589,false,0.00806451612903]
["TCGA-HNSC","TCGA-CQ-6228-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.787,true,"NA"]
["TCGA-HNSC","TCGA-CQ-6229-01A","19:ZNF574:42081549:AC243960.1:41554951:rev:+","ZNF574--AC243960.1",2.0,0.0,90.0,0.0,0.439,false,"NA"]
["TCGA-HNSC","TCGA-CQ-7071-01A","7:ACTB:5529161:-:11:MALAT1:65504133:+:fusion","ACTB--MALAT1",1.0,0.0,1.0,0.0,0.762,false,0.00549450549451]
["TCGA-HNSC","TCGA-CQ-A4C6-01A","11:PEX16:45911899:AMBRA1:46435037:rev:-","PEX16--AMBRA1",2.0,25.0,2.0,1.0,0.625,false,"NA"]
["TCGA-HNSC","TCGA-CQ-A4C9-01A","1:GAS5:173865857:-:22:SH3BP1:37644870:+:fusion","GAS5--SH3BP1",2.0,0.0,1.0,0.0,0.181,false,0.0327868852459]
["TCGA-HNSC","TCGA-CQ-A4CG-01A","17:VPS53:697418:NXN:826078:rev:-","VPS53--NXN",1.0,0.0,1.0,0.0,0.905,false,"NA"]
["TCGA-HNSC","TCGA-CQ-A4CH-01A","7:RAPGEF5:22291175:-:7:KLHL7:23123777:+:strandcross","RAPGEF5--KLHL7",1.0,0.0,1.0,0.0,0.896,false,0.0]
["TCGA-HNSC","TCGA-CR-6467-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",18.0,9462.0,7336.0,7317.0,0.807462936788584,true,"NA"]
["TCGA-HNSC","TCGA-CR-6470-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",8.0,2324.0,521.0,517.0,0.315,true,0.016393442623]
["TCGA-HNSC","TCGA-CR-6477-01A","12:KRT5:52519901:-:17:SGSM2:2337506:+:fusion","KRT5--SGSM2",3.0,0.0,1.0,0.0,0.338,false,0.0125]
["TCGA-HNSC","TCGA-CR-6482-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.807,false,"NA"]
["TCGA-HNSC","TCGA-CR-6491-01A","11:RPLP2:811645:+:12:PTMS:6769603:+:fusion","RPLP2--PTMS",1.0,0.0,1.0,0.0,0.718,false,0.002886002886]
["TCGA-HNSC","TCGA-CR-6493-01A","17:ACTG1:81509989:-:19:TIMM13:2427046:-:fusion","ACTG1--TIMM13",4.0,0.0,7.0,0.0,0.544,false,0.0]
["TCGA-HNSC","TCGA-CR-7369-01A","16:SLC12A4:67944593:-:12:KRT6A:52493257:-:fusion","SLC12A4--KRT6A",2.0,0.0,1.0,0.0,0.286,false,0.0212765957447]
["TCGA-HNSC","TCGA-CR-7371-01A","17:MYO1C:1491600:PITPNA:1558559:rev:-","MYO1C--PITPNA",2.0,14.0,20.0,6.0,0.839,false,"NA"]
["TCGA-HNSC","TCGA-CR-7376-01A","16:SPSB3:1781358:-:11:MUC5B:1252809:+:fusion","SPSB3--MUC5B",2.0,0.0,1.0,0.0,0.506,false,0.0131086142322]
["TCGA-HNSC","TCGA-CR-7379-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.295,true,0.0184804928131]
["TCGA-HNSC","TCGA-CR-7389-01A","1:MIR205HG:209431825:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",2.0,315.0,342.0,224.0,0.862,false,0.0]
["TCGA-HNSC","TCGA-CR-7392-01A","4:LINC02362:184376441:IRF2:184429070:rev:-","LINC02362--IRF2",1.0,0.0,1.0,0.0,0.986,false,"NA"]
["TCGA-HNSC","TCGA-CR-7393-01A","9:EHMT1:137743100:+:12:KRT6A:52491736:-:fusion","EHMT1--KRT6A",2.0,0.0,1.0,0.0,0.434,false,0.0147601476015]
["TCGA-HNSC","TCGA-CR-7404-01A","4:METAP1:99028918:RAP1GDS1:98343139:rev:+","METAP1--RAP1GDS1",1.0,1.0,1.0,0.0,0.879,false,"NA"]
["TCGA-HNSC","TCGA-CV-5431-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",11.0,0.0,1499.0,0.0,0.168,false,0.0700636942675]
["TCGA-HNSC","TCGA-CV-5440-01A","19:CIRBP:1259638:+:1:SPRR1B:153032327:+:fusion","CIRBP--SPRR1B",2.0,0.0,1.0,0.0,0.256,false,0.0158102766798]
["TCGA-HNSC","TCGA-CV-5443-01A","17:EIF5A:7311651:+:11:TMEM223:62791992:-:fusion","EIF5A--TMEM223",3.0,0.0,1.0,0.0,0.197,false,0.0308788598575]
["TCGA-HNSC","TCGA-CV-5973-01A","17:PER1:8140472:MYH10:8493898:rev:-","PER1--MYH10",2.0,0.0,39.0,0.0,0.458,false,"NA"]
["TCGA-HNSC","TCGA-CV-5978-01A","4:MRFAP1:6641258:+:17:UBB:16380799:+:fusion","MRFAP1--UBB",4.0,0.0,122.0,0.0,0.341,false,0.011961722488]
["TCGA-HNSC","TCGA-CV-6436-01A","9:UBAC1:135932969:CCDC183-AS1:136808848:rev:-","UBAC1--CCDC183-AS1",4.0,0.0,40.0,0.0,0.487,false,"NA"]
["TCGA-HNSC","TCGA-CV-6441-01A","2:MYL1:210290150:-:8:AP003352.1:98041726:+:fusion","MYL1--AP003352.1",6.0,0.0,1.0,0.0,0.241,false,0.0282776349614]
["TCGA-HNSC","TCGA-CV-6933-11A","5:ELL2:95961575:-:5:AC104123.1:96379566:+:strandcross","ELL2--AC104123.1",1.0,0.0,1.0,0.0,0.745,false,0.0115207373272]
["TCGA-HNSC","TCGA-CV-6935-11A","17:KRT13:41505056:-:16:THOC6:3027577:+:fusion","KRT13--THOC6",2.0,0.0,1.0,0.0,0.222,false,0.0246478873239]
["TCGA-HNSC","TCGA-CV-6938-01A","17:RPL26:8377526:MYH10:8493898:rev:-","RPL26--MYH10",1.0,0.0,1.0,0.0,0.889,false,"NA"]
["TCGA-HNSC","TCGA-CV-6938-01A","12:KRT5:52519742:-:15:GRAMD2:72197785:-:fusion","KRT5--GRAMD2",1.0,0.0,1.0,0.0,0.978,false,0.0030303030303]
["TCGA-HNSC","TCGA-CV-6938-01A","17:ACTG1:81511188:-:1:ACTA1:229431902:-:fusion","ACTG1--ACTA1",1.0,0.0,3.0,0.0,0.943,false,0.00606060606061]
["TCGA-HNSC","TCGA-CV-6941-01A","17:WIPF2:40256522:PSMD3:39984294:rev:+","WIPF2--PSMD3",1.0,0.0,1.0,0.0,0.892,false,"NA"]
["TCGA-HNSC","TCGA-CV-6943-01A","1:LMNA:156134498:+:17:KRT14:41584413:-:fusion","LMNA--KRT14",2.0,0.0,1.0,0.0,0.36,false,0.00560538116592]
["TCGA-HNSC","TCGA-CV-6948-01A","X:MIR222HG:45769786:ZNF674:46501335:rev:-","MIR222HG--ZNF674",1.0,0.0,1.0,0.0,0.988,false,"NA"]
["TCGA-HNSC","TCGA-CV-6951-01A","22:MYH9:36286718:-:17:KRT17:41621751:-:fusion","MYH9--KRT17",1.0,0.0,1.0,0.0,0.974,false,0.0]
["TCGA-HNSC","TCGA-CV-6955-11A","X:DOCK11:118561517:WDR44:118444360:rev:+","DOCK11--WDR44",1.0,0.0,1.0,0.0,0.882,false,"NA"]
["TCGA-HNSC","TCGA-CV-6959-11A","17:ALOX12-AS1:7010059:-:17:KRT13:41501362:-:rev","ALOX12-AS1--KRT13",2.0,0.0,3.0,0.0,0.293,false,0.0174216027875]
["TCGA-HNSC","TCGA-CV-6960-01A","2:MOGS:74461069:-:20:HM13:31567640:+:fusion","MOGS--HM13",2.0,0.0,1.0,0.0,0.302,false,0.0177514792899]
["TCGA-HNSC","TCGA-CV-7089-01A","1:LYPLAL1:219179246:RRP15:218330948:rev:+","LYPLAL1--RRP15",2.0,19.0,43.0,12.0,0.855,true,"NA"]
["TCGA-HNSC","TCGA-CV-7090-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",7.0,2324.0,521.0,517.0,0.288,true,0.0108695652174]
["TCGA-HNSC","TCGA-CV-7100-01A","11:ARHGAP42:100859625:+:11:CHRDL2:74708395:-:strandcross","ARHGAP42--CHRDL2",2.0,0.0,1.0,0.0,0.47,false,0.00390625]
["TCGA-HNSC","TCGA-CV-7101-11A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.464,false,"NA"]
["TCGA-HNSC","TCGA-CV-7177-11A","20:TGM3:2332310:+:17:AC004448.1:19446852:-:fusion","TGM3--AC004448.1",2.0,0.0,1.0,0.0,0.424,false,0.0201729106628]
["TCGA-HNSC","TCGA-CV-7178-11A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",22.0,1.0,1034.0,1.0,0.874986407435175,false,"NA"]
["TCGA-HNSC","TCGA-CV-7242-01A","11:CLNS1A:77637590:ALG8:78104453:rev:-","CLNS1A--ALG8",1.0,0.0,1.0,0.0,0.979,false,"NA"]
["TCGA-HNSC","TCGA-CV-7242-11A","12:EMP1:13219939:+:X:NDUFA1:119873304:+:fusion","EMP1--NDUFA1",2.0,0.0,1.0,0.0,0.212,false,0.0180412371134]
["TCGA-HNSC","TCGA-CV-7247-01A","X:ATRX:77785982:MAGT1:77857497:rev:-","ATRX--MAGT1",1.0,1.0,1.0,0.0,0.831,false,"NA"]
["TCGA-HNSC","TCGA-CV-7252-01A","17:FAM104A:73232086:CDC42EP4:73286612:rev:-","FAM104A--CDC42EP4",1.0,4.0,4.0,3.0,0.951,false,"NA"]
["TCGA-HNSC","TCGA-CV-7255-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",3.0,0.0,98.0,0.0,0.234,false,0.00743494423792]
["TCGA-HNSC","TCGA-CV-7255-11A","17:KRT19:41525191:-:19:EEF2:3983291:-:fusion","KRT19--EEF2",1.0,1.0,3.0,1.0,0.848,false,0.00892857142857]
["TCGA-HNSC","TCGA-CV-7263-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",5.0,669.0,283.0,225.0,0.451,true,"NA"]
["TCGA-HNSC","TCGA-CV-7409-01A","6:TUBB:30725426:+:1:S100A9:153360644:+:fusion","TUBB--S100A9",3.0,0.0,1.0,0.0,0.164,false,0.03]
["TCGA-HNSC","TCGA-CV-7411-01A","2:KIDINS220:8730201:-:17:KRT17:41624296:-:fusion","KIDINS220--KRT17",3.0,0.0,1.0,0.0,0.155,false,0.0645161290323]
["TCGA-HNSC","TCGA-CV-7416-01A","10:COL17A1:104031288:-:15:CA12:63326357:-:fusion","COL17A1--CA12",6.0,0.0,6.0,0.0,0.234,false,0.0208333333333]
["TCGA-HNSC","TCGA-CV-7416-11A","1:SPRR2A:153057471:-:19:KLK13:51058674:-:fusion","SPRR2A--KLK13",1.0,0.0,1.0,0.0,0.99,false,0.0]
["TCGA-HNSC","TCGA-CV-7424-11A","19:NOTCH3:15200788:AKAP8L:15410594:rev:-","NOTCH3--AKAP8L",1.0,0.0,1.0,0.0,0.812,false,"NA"]
["TCGA-HNSC","TCGA-CV-7425-01A","12:KRT5:52517107:-:X:CXorf40B:149938435:-:fusion","KRT5--CXorf40B",2.0,0.0,1.0,0.0,0.161,false,0.0623973727422]
["TCGA-HNSC","TCGA-CV-7427-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",6.0,0.0,1499.0,0.0,0.491,false,0.00555555555556]
["TCGA-HNSC","TCGA-CV-7432-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",4.0,2324.0,521.0,517.0,0.324,true,0.00966183574879]
["TCGA-HNSC","TCGA-CV-7435-01A","1:LRP8:53246553:-:6:SYCP2L:10974768:+:fusion","LRP8--SYCP2L",3.0,0.0,30.0,0.0,0.261,false,0.017825311943]
["TCGA-HNSC","TCGA-CV-7438-01A","13:POSTN:37562591:-:14:YY1:100262304:+:fusion","POSTN--YY1",3.0,11.0,14.0,0.0,0.155,false,0.0225225225225]
["TCGA-HNSC","TCGA-CV-7438-11A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",1.0,669.0,283.0,225.0,0.832,false,"NA"]
["TCGA-HNSC","TCGA-CV-7440-01A","12:TUBA1C:49269527:+:12:TUBA1B:49131395:-:strandcross","TUBA1C--TUBA1B",3.0,73.0,38.0,20.0,0.261,true,0.0179028132992]
["TCGA-HNSC","TCGA-CV-7568-01A","1:PSMA5:109409928:-:10:MARCH8:45553204:-:fusion","PSMA5--MARCH8",3.0,2458.0,7.0,3.0,1.0,true,0.0]
["TCGA-HNSC","TCGA-CV-A45R-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.477,false,"NA"]
["TCGA-HNSC","TCGA-CV-A45U-01A","1:MIR205HG:209430476:+:9:C9orf3:95086682:+:fusion","MIR205HG--C9orf3",1.0,8.0,35.0,4.0,0.912,false,0.00468384074941]
["TCGA-HNSC","TCGA-CV-A45Z-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",1.0,442.0,88.0,47.0,0.815,false,"NA"]
["TCGA-HNSC","TCGA-CV-A460-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.646,true,"NA"]
["TCGA-HNSC","TCGA-CV-A468-01A","3:AC078785.1:113089024:+:19:AC011558.1:1039064:-:fusion","AC078785.1--AC011558.1",6.0,2452.0,1.0,0.0,0.298,false,0.0178890876565]
["TCGA-HNSC","TCGA-CV-A6JD-01A","17:COL1A1:50186640:-:19:BST2:17403326:-:fusion","COL1A1--BST2",2.0,1.0,13.0,0.0,0.174,false,0.0188383045526]
["TCGA-HNSC","TCGA-CV-A6JN-01A","19:TNPO2:12699201:HOOK2:12773253:rev:-","TNPO2--HOOK2",2.0,2485.0,95.0,92.0,0.46,true,"NA"]
["TCGA-HNSC","TCGA-CV-A6JU-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.519,true,"NA"]
["TCGA-HNSC","TCGA-CV-A6K1-01A","3:COL7A1:48564073:AC104452.1:49423856:rev:-","COL7A1--AC104452.1",3.0,8.0,51.0,0.0,0.411,false,"NA"]
["TCGA-HNSC","TCGA-CX-7085-01A","14:IGHG1:105742065:-:11:PRPF19:60902465:-:fusion","IGHG1--PRPF19",2.0,0.0,1.0,0.0,0.361,false,0.0196399345336]
["TCGA-HNSC","TCGA-CX-7086-01A","1:S100A8:153390204:-:20:PIGT:45419295:+:fusion","S100A8--PIGT",2.0,0.0,2.0,0.0,0.197,false,0.0194346289753]
["TCGA-HNSC","TCGA-D6-6516-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",9.0,0.0,1758.0,0.0,0.791,false,"NA"]
["TCGA-HNSC","TCGA-D6-6517-01A","17:KRT14:41583235:-:16:HERPUD1:56939249:+:fusion","KRT14--HERPUD1",6.0,0.0,7.0,0.0,0.242,false,0.0141843971631]
["TCGA-HNSC","TCGA-D6-6826-01A","2:YWHAQ:9588298:-:8:AC107376.1:56074592:+:fusion","YWHAQ--AC107376.1",4.0,0.0,1.0,0.0,0.197,false,0.0196374622356]
["TCGA-HNSC","TCGA-D6-A4ZB-01A","19:MAN2B1:12646511:HOOK2:12773253:rev:-","MAN2B1--HOOK2",2.0,621.0,20.0,18.0,0.447,true,"NA"]
["TCGA-HNSC","TCGA-D6-A6EN-01A","10:ARHGAP21:24583614:AL354976.1:25244854:rev:-","ARHGAP21--AL354976.1",2.0,234.0,18.0,0.0,0.436,false,"NA"]
["TCGA-HNSC","TCGA-D6-A6EN-01A","5:CCNB1:69171452:+:3:ULK4:41800293:-:fusion","CCNB1--ULK4",5.0,0.0,10.0,0.0,0.23,false,0.00900900900901]
["TCGA-HNSC","TCGA-D6-A6EQ-01A","1:FAM212B:111739186:ST7L:112526111:rev:-","FAM212B--ST7L",2.0,0.0,1.0,0.0,0.809,false,"NA"]
["TCGA-HNSC","TCGA-DQ-5629-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.521,false,"NA"]
["TCGA-HNSC","TCGA-DQ-7589-01A","14:MTA1:105420063:PACS2:105394554:rev:+","MTA1--PACS2",1.0,0.0,1.0,0.0,0.954,false,"NA"]
["TCGA-HNSC","TCGA-DQ-7592-01A","14:IFI27:94111773:IFI27L1:94101814:rev:+","IFI27--IFI27L1",3.0,0.0,7.0,0.0,0.641,false,"NA"]
["TCGA-HNSC","TCGA-DQ-7592-01A","2:IGKC:88857161:-:3:EIF4G1:184325299:+:fusion","IGKC--EIF4G1",3.0,0.0,48.0,0.0,0.29,false,0.0101880877743]
["TCGA-HNSC","TCGA-F7-8489-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.73,true,0.00255102040816]
["TCGA-HNSC","TCGA-F7-A50I-01A","17:UTP6:31887236:-:17:BCAS3:61034666:+:strandcross","UTP6--BCAS3",2.0,0.0,1.0,0.0,0.845,false,0.00380228136882]
["TCGA-HNSC","TCGA-F7-A623-01A","3:PCYT1A:196287615:WDR53:196554807:rev:-","PCYT1A--WDR53",1.0,0.0,1.0,0.0,0.95,false,"NA"]
["TCGA-HNSC","TCGA-H7-8501-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.299,false,0.0173410404624]
["TCGA-HNSC","TCGA-HD-7754-01A","1:S100A8:153390395:-:8:CTSB:11847822:-:fusion","S100A8--CTSB",8.0,0.0,22.0,0.0,0.235,false,0.0105900151286]
["TCGA-HNSC","TCGA-HD-7832-01A","6:HLA-B:31357086:-:12:MYL6:56158349:+:fusion","HLA-B--MYL6",2.0,0.0,1.0,0.0,0.42,false,0.00531914893617]
["TCGA-HNSC","TCGA-HD-A633-01A","18:NAPG:10526158:RAB31:9845582:rev:+","NAPG--RAB31",1.0,0.0,6.0,0.0,0.852,false,"NA"]
["TCGA-HNSC","TCGA-HD-A634-01A","1:SNHG3:28508160:+:11:TAF1D:93734660:-:fusion","SNHG3--TAF1D",1.0,2.0,1.0,0.0,0.981,false,0.0]
["TCGA-HNSC","TCGA-HD-A6I0-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",11.0,0.0,495.0,0.0,0.51,false,"NA"]
["TCGA-HNSC","TCGA-IQ-7630-01A","7:BRI3:98291524:+:16:CFDP1:75305182:-:fusion","BRI3--CFDP1",5.0,0.0,1.0,0.0,0.25,false,0.0104529616725]
["TCGA-HNSC","TCGA-IQ-A61I-01A","22:APOL1:36266107:+:17:AC019349.1:41500983:+:fusion","APOL1--AC019349.1",5.0,448.0,2.0,2.0,0.16,true,0.0289855072464]
["TCGA-HNSC","TCGA-IQ-A6SG-01A","7:BRAF:140777991:-:7:SUGCT:40860316:+:strandcross","BRAF--SUGCT",8.0,0.0,70.0,0.0,0.568,false,0.00507614213198]
["TCGA-HNSC","TCGA-KU-A6H7-01A","7:ACTB:5528470:-:17:RPL26:8383167:-:fusion","ACTB--RPL26",3.0,0.0,36.0,0.0,0.27,false,0.00905797101449]
["TCGA-HNSC","TCGA-KU-A6H7-06A","1:OBSCN:228361250:+:1:DISC1:231770835:+:reg","OBSCN--DISC1",4.0,0.0,1.0,0.0,0.25,false,0.0177514792899]
["TCGA-HNSC","TCGA-KU-A6H7-06A","8:MAL2:119245673:+:5:RPS23:82278577:-:fusion","MAL2--RPS23",2.0,0.0,1.0,0.0,0.165,false,0.00910273081925]
["TCGA-HNSC","TCGA-MT-A7BN-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",79.0,1.0,1034.0,1.0,0.986936751325656,false,"NA"]
["TCGA-HNSC","TCGA-MZ-A6I9-01A","19:RPL28:55386693:+:19:RPS16:39433761:-:strandcross","RPL28--RPS16",1.0,0.0,1.0,0.0,0.947,false,0.0]
["TCGA-HNSC","TCGA-P3-A6SW-01A","2:IGKC:88857161:-:X:NDUFA1:119873304:+:fusion","IGKC--NDUFA1",8.0,0.0,22.0,0.0,0.278,false,0.0154639175258]
["TCGA-HNSC","TCGA-P3-A6T2-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.703,true,"NA"]
["TCGA-HNSC","TCGA-P3-A6T6-01A","20:SLC24A3:19281087:DTD1:18744100:rev:+","SLC24A3--DTD1",1.0,2.0,4.0,1.0,0.843,false,"NA"]
["TCGA-HNSC","TCGA-QK-A6IH-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.494,false,"NA"]
["TCGA-HNSC","TCGA-QK-A6IJ-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",5.0,2722.0,255.0,144.0,0.576,false,"NA"]
["TCGA-HNSC","TCGA-QK-A8Z8-01A","X:MAGEC3:141896507:+:X:MAGEC2:142204053:-:strandcross","MAGEC3--MAGEC2",8.0,230.0,53.0,48.0,0.429,true,0.0170068027211]
["TCGA-HNSC","TCGA-QK-A8ZA-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.934,true,"NA"]
["TCGA-HNSC","TCGA-T3-A92M-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.763,false,"NA"]
["TCGA-HNSC","TCGA-TN-A7HI-01A","21:LTN1:28965865:CCT8:29060660:rev:-","LTN1--CCT8",1.0,0.0,1.0,0.0,0.909,false,"NA"]
["TCGA-HNSC","TCGA-UF-A719-01A","14:CINP:102362845:CDC42BPB:102946684:rev:-","CINP--CDC42BPB",1.0,0.0,1.0,0.0,0.963,false,"NA"]
["TCGA-HNSC","TCGA-UF-A7JC-01A","2:FARP2:241356388:SEPT2:241346166:rev:+","FARP2--SEPT2",1.0,0.0,1.0,0.0,0.883,false,"NA"]
["TCGA-HNSC","TCGA-UF-A7JO-01A","11:MMP12:102862736:-:17:AC130324.1:30864940:-:fusion","MMP12--AC130324.1",11.0,1081.0,16.0,7.0,0.917,false,0.0]
["TCGA-HNSC","TCGA-UF-A7JV-01A","7:ACTB:5528470:-:1:SCAMP3:155262259:-:fusion","ACTB--SCAMP3",7.0,0.0,12.0,0.0,0.255,false,0.0328947368421]
["TCGA-KICH","TCGA-KL-8327-01A","15:RHCG:89471407:PEX11A:89677932:rev:-","RHCG--PEX11A",15.0,1015.0,22.0,22.0,0.635,true,"NA"]
["TCGA-KICH","TCGA-KL-8330-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.378,true,0.0168918918919]
["TCGA-KICH","TCGA-KL-8332-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",15.0,0.0,1126.0,0.0,0.518,false,"NA"]
["TCGA-KICH","TCGA-KL-8337-01A","14:LGALS3:55140440:+:19:RPS11:49496436:+:fusion","LGALS3--RPS11",3.0,41.0,1.0,0.0,0.308,false,0.0155763239875]
["TCGA-KICH","TCGA-KL-8341-01A","15:SCAMP2:74873199:COX5A:74929232:rev:-","SCAMP2--COX5A",1.0,0.0,1.0,0.0,0.818,false,"NA"]
["TCGA-KICH","TCGA-KM-8441-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",4.0,2010.0,1976.0,1665.0,0.169,true,0.0440251572327]
["TCGA-KICH","TCGA-KM-8476-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",18.0,0.0,495.0,0.0,0.777282066985063,false,"NA"]
["TCGA-KICH","TCGA-KN-8423-11A","15:MEIS2:37036814:-:17:ZSWIM7:15977092:-:fusion","MEIS2--ZSWIM7",2.0,0.0,1.0,0.0,0.57,false,0.0103359173127]
["TCGA-KICH","TCGA-KN-8424-11A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.323,true,0.0347222222222]
["TCGA-KICH","TCGA-KN-8427-01A","22:SLC25A1:19176578:-:1:ENO1:8865482:-:fusion","SLC25A1--ENO1",2.0,0.0,8.0,0.0,0.167,false,0.0217391304348]
["TCGA-KICH","TCGA-KN-8430-01A","11:MCAM:119311090:-:1:PPP2R5A:212360638:+:fusion","MCAM--PPP2R5A",5.0,0.0,6.0,0.0,0.483,false,0.0147058823529]
["TCGA-KICH","TCGA-KN-8435-11A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",11.0,0.0,1499.0,0.0,0.16,false,0.00578034682081]
["TCGA-KICH","TCGA-KO-8403-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",4.0,2010.0,1976.0,1665.0,0.674,true,0.0117647058824]
["TCGA-KICH","TCGA-KO-8404-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",18.0,7942.0,781.0,771.0,0.651325350184727,true,0.0]
["TCGA-KICH","TCGA-KO-8414-01A","12:COX6A1:120438810:+:8:AC130304.1:37858949:+:fusion","COX6A1--AC130304.1",2.0,2302.0,1.0,1.0,0.315,true,0.00591715976331]
["TCGA-KIRC","TCGA-A3-3306-01A","1:NRAS:114716050:CSDE1:114725333:rev:-","NRAS--CSDE1",2.0,0.0,2.0,0.0,0.681,false,"NA"]
["TCGA-KIRC","TCGA-A3-3322-01A","2:AC007283.1:201167272:+:7:AC010655.2:128466563:+:fusion","AC007283.1--AC010655.2",2.0,267.0,1.0,1.0,0.6,true,0.0192307692308]
["TCGA-KIRC","TCGA-A3-3329-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.474,false,"NA"]
["TCGA-KIRC","TCGA-A3-3358-01A","9:MVB12B:126421948:PBX3:125915686:rev:+","MVB12B--PBX3",1.0,0.0,1.0,0.0,0.955,false,"NA"]
["TCGA-KIRC","TCGA-A3-3363-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,1126.0,0.0,0.414,false,"NA"]
["TCGA-KIRC","TCGA-A3-3376-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",11.0,0.0,297.0,0.0,0.2,false,0.0328185328185]
["TCGA-KIRC","TCGA-A3-3385-01A","10:AKR1C3:5102210:AKR1C1:4972584:rev:+","AKR1C3--AKR1C1",3.0,9342.0,1.0,1.0,0.483,true,"NA"]
["TCGA-KIRC","TCGA-A3-A8OX-01A","11:GSTP1:67586211:+:11:MCAM:119309915:-:strandcross","GSTP1--MCAM",4.0,0.0,8.0,0.0,0.221,false,0.0292553191489]
["TCGA-KIRC","TCGA-AK-3434-01A","17:KRT19:41523617:DHX58:42102809:rev:-","KRT19--DHX58",5.0,0.0,30.0,0.0,0.401,false,"NA"]
["TCGA-KIRC","TCGA-AK-3447-01A","6:FKBP5:35573590:AL133507.1:35989902:rev:-","FKBP5--AL133507.1",2.0,1.0,31.0,0.0,0.503,false,"NA"]
["TCGA-KIRC","TCGA-AK-3455-01A","1:PKLR:155290253:GON4L:155784389:rev:-","PKLR--GON4L",2.0,26.0,1.0,1.0,0.467,true,"NA"]
["TCGA-KIRC","TCGA-AK-3461-01A","22:ADA2:17188339:ATP6V1E1:17619127:rev:-","ADA2--ATP6V1E1",1.0,4.0,1.0,0.0,0.811,false,"NA"]
["TCGA-KIRC","TCGA-B0-4698-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.456,true,"NA"]
["TCGA-KIRC","TCGA-B0-4706-01A","3:HEG1:125055575:SLC12A8:125110335:rev:-","HEG1--SLC12A8",1.0,0.0,1.0,0.0,0.972,false,"NA"]
["TCGA-KIRC","TCGA-B0-4810-01A","2:PPP1CB:28752176:BABAM2:28298338:rev:+","PPP1CB--BABAM2",1.0,2.0,7.0,2.0,0.897,false,"NA"]
["TCGA-KIRC","TCGA-B0-4818-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",25.0,0.0,297.0,0.0,0.174885907771233,false,0.0257575757576]
["TCGA-KIRC","TCGA-B0-4837-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.518,false,"NA"]
["TCGA-KIRC","TCGA-B0-4842-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.41,false,"NA"]
["TCGA-KIRC","TCGA-B0-4848-01A","10:UPF2:11948369:-:8:CLU:27606524:-:fusion","UPF2--CLU",5.0,0.0,1.0,0.0,0.335,false,0.0372340425532]
["TCGA-KIRC","TCGA-B0-5083-01A","9:ABHD17B:71910634:ZFAND5:72357056:rev:-","ABHD17B--ZFAND5",1.0,1.0,2.0,1.0,0.94,false,"NA"]
["TCGA-KIRC","TCGA-B0-5099-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.834,true,"NA"]
["TCGA-KIRC","TCGA-B0-5109-01A","2:IGKC:88857161:-:17:CLDN7:7262945:-:fusion","IGKC--CLDN7",9.0,0.0,23.0,0.0,0.174,false,0.0233766233766]
["TCGA-KIRC","TCGA-B0-5115-01A","7:ACTB:5528470:-:12:SCARB1:124786503:-:fusion","ACTB--SCARB1",7.0,0.0,6.0,0.0,0.181,false,0.0408163265306]
["TCGA-KIRC","TCGA-B0-5400-01A","16:HP:72061026:+:1:MAPKAPK2:206731839:+:fusion","HP--MAPKAPK2",3.0,0.0,1.0,0.0,0.331,false,0.0189655172414]
["TCGA-KIRC","TCGA-B0-5400-01A","8:CLU:27604310:-:16:VKORC1:31094549:-:fusion","CLU--VKORC1",9.0,0.0,1.0,0.0,0.555,false,0.0120689655172]
["TCGA-KIRC","TCGA-B0-5695-01A","10:INPP5A:132650505:PWWP2B:132417061:rev:+","INPP5A--PWWP2B",1.0,7.0,8.0,3.0,0.876,false,"NA"]
["TCGA-KIRC","TCGA-B0-5700-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.947,true,"NA"]
["TCGA-KIRC","TCGA-B0-5709-01A","12:TUBA1C:49269527:+:12:TUBA1B:49131395:-:strandcross","TUBA1C--TUBA1B",2.0,73.0,38.0,20.0,0.287,false,0.0241935483871]
["TCGA-KIRC","TCGA-B0-5712-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.863,true,"NA"]
["TCGA-KIRC","TCGA-B2-3923-01A","6:ABCF1:30589720:+:2:MGAT4A:98726567:-:fusion","ABCF1--MGAT4A",4.0,0.0,1.0,0.0,0.184,false,0.0373134328358]
["TCGA-KIRC","TCGA-B2-4102-01A","16:PDPK1:2595850:NUBP2:1783877:rev:+","PDPK1--NUBP2",1.0,2.0,4.0,1.0,0.802,false,"NA"]
["TCGA-KIRC","TCGA-B2-5633-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",8.0,0.0,225.0,0.0,0.438,false,0.0253807106599]
["TCGA-KIRC","TCGA-B2-5635-01B","6:SMIM8:87375710:C6orf163:87356301:rev:+","SMIM8--C6orf163",1.0,0.0,1.0,0.0,0.847,false,"NA"]
["TCGA-KIRC","TCGA-B4-5378-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.403,false,"NA"]
["TCGA-KIRC","TCGA-B8-4148-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.979,true,"NA"]
["TCGA-KIRC","TCGA-B8-4148-01A","3:LAMB2:49124395:-:17:CLUH:2691682:-:fusion","LAMB2--CLUH",1.0,0.0,1.0,0.0,0.913,false,0.00135135135135]
["TCGA-KIRC","TCGA-B8-5165-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",2.0,198.0,115.0,72.0,0.706,false,"NA"]
["TCGA-KIRC","TCGA-B8-5549-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.54,false,"NA"]
["TCGA-KIRC","TCGA-B8-A54I-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",2.0,0.0,1126.0,0.0,0.441,false,"NA"]
["TCGA-KIRC","TCGA-BP-4160-01A","19:LILRA6:54240831:LILRB2:54278562:rev:-","LILRA6--LILRB2",3.0,125.0,46.0,44.0,0.829,true,"NA"]
["TCGA-KIRC","TCGA-BP-4170-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",3.0,2722.0,255.0,144.0,0.432,true,"NA"]
["TCGA-KIRC","TCGA-BP-4174-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.915,true,"NA"]
["TCGA-KIRC","TCGA-BP-4337-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.537,false,"NA"]
["TCGA-KIRC","TCGA-BP-4341-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",2.0,187.0,145.0,16.0,0.401,false,0.0179282868526]
["TCGA-KIRC","TCGA-BP-4346-01A","6:MDC1:30699807:FLOT1:30740853:rev:-","MDC1--FLOT1",2.0,1217.0,58.0,53.0,0.465,true,"NA"]
["TCGA-KIRC","TCGA-BP-4758-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",8.0,0.0,297.0,0.0,0.225,false,0.0239808153477]
["TCGA-KIRC","TCGA-BP-4761-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.422,true,"NA"]
["TCGA-KIRC","TCGA-BP-4781-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.648,false,"NA"]
["TCGA-KIRC","TCGA-BP-4790-01A","19:LILRA6:54240831:LILRB2:54278562:rev:-","LILRA6--LILRB2",6.0,125.0,46.0,44.0,0.782,true,"NA"]
["TCGA-KIRC","TCGA-BP-4804-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.938,true,"NA"]
["TCGA-KIRC","TCGA-BP-4965-01A","8:CPQ:96645402:SDC2:96529193:rev:+","CPQ--SDC2",1.0,1.0,3.0,1.0,0.956,false,"NA"]
["TCGA-KIRC","TCGA-BP-4974-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",3.0,6005.0,679.0,674.0,0.439,true,"NA"]
["TCGA-KIRC","TCGA-BP-4975-01A","16:MGRN1:4625048:HMOX2:4496146:rev:+","MGRN1--HMOX2",2.0,470.0,108.0,36.0,0.995,true,"NA"]
["TCGA-KIRC","TCGA-BP-4986-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.663,true,"NA"]
["TCGA-KIRC","TCGA-BP-4994-01A","14:HIF1A:61695839:PRKCH:61485502:rev:+","HIF1A--PRKCH",1.0,15.0,26.0,8.0,0.91,false,"NA"]
["TCGA-KIRC","TCGA-BP-5000-01A","5:GPX3:151028954:+:17:GPS2:7315119:-:fusion","GPX3--GPS2",3.0,0.0,1.0,0.0,0.154,false,0.0160550458716]
["TCGA-KIRC","TCGA-BP-5169-01A","3:IP6K2:48688003:AC104452.1:49423856:rev:-","IP6K2--AC104452.1",2.0,97.0,99.0,0.0,0.404,false,"NA"]
["TCGA-KIRC","TCGA-BP-5173-01A","1:PINK1:20651316:+:7:TRIP6:100867387:+:fusion","PINK1--TRIP6",7.0,0.0,1.0,0.0,0.174,false,0.025462962963]
["TCGA-KIRC","TCGA-BP-5183-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.768,true,"NA"]
["TCGA-KIRC","TCGA-BP-5186-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.858,true,"NA"]
["TCGA-KIRC","TCGA-BP-5199-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",12.0,4574.0,830.0,638.0,0.665,true,0.0107334525939]
["TCGA-KIRC","TCGA-CJ-4636-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",1.0,402.0,251.0,118.0,0.825,false,"NA"]
["TCGA-KIRC","TCGA-CJ-4643-01A","9:LINC01503:129342043:PHYHD1:128921482:rev:+","LINC01503--PHYHD1",2.0,197.0,8.0,1.0,0.503,false,"NA"]
["TCGA-KIRC","TCGA-CJ-4871-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.817224936961773,false,"NA"]
["TCGA-KIRC","TCGA-CJ-4885-01A","14:HNRNPC:21211459:-:17:ACADVL:7224217:+:fusion","HNRNPC--ACADVL",8.0,0.0,1.0,0.0,0.489,false,0.020618556701]
["TCGA-KIRC","TCGA-CJ-4889-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.418,true,"NA"]
["TCGA-KIRC","TCGA-CJ-4891-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.764,false,"NA"]
["TCGA-KIRC","TCGA-CJ-4902-01A","5:SMAD5:136132962:TGFBI:136049439:rev:+","SMAD5--TGFBI",1.0,0.0,1.0,0.0,0.894,false,"NA"]
["TCGA-KIRC","TCGA-CJ-4907-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",4.0,0.0,205.0,0.0,0.225,false,0.0036496350365]
["TCGA-KIRC","TCGA-CJ-5677-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",3.0,4574.0,830.0,638.0,0.302,false,0.0193236714976]
["TCGA-KIRC","TCGA-CJ-5680-01A","11:FXYD2:117824162:-:7:C7orf49:135169060:-:fusion","FXYD2--C7orf49",2.0,0.0,1.0,0.0,0.438,false,0.0151515151515]
["TCGA-KIRC","TCGA-CJ-6033-01A","17:STAT3:42313324:AARSD1:42955456:rev:-","STAT3--AARSD1",2.0,1729.0,51.0,51.0,0.659,true,"NA"]
["TCGA-KIRC","TCGA-CW-5580-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.931,true,"NA"]
["TCGA-KIRC","TCGA-CW-5588-01A","8:CASC21:127339435:PCAT1:127006555:rev:+","CASC21--PCAT1",1.0,0.0,1.0,0.0,0.808,false,"NA"]
["TCGA-KIRC","TCGA-CZ-4854-01A","11:C11orf49:46987310:ATG13:46630045:rev:+","C11orf49--ATG13",1.0,0.0,1.0,0.0,0.902,false,"NA"]
["TCGA-KIRC","TCGA-CZ-4864-01A","17:AC005224.1:14210565:+:6:ENPP3:131733588:+:fusion","AC005224.1--ENPP3",40.0,922.0,35.0,35.0,0.594888084479118,true,0.00765696784074]
["TCGA-KIRC","TCGA-CZ-5453-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.321,true,0.0328358208955]
["TCGA-KIRC","TCGA-CZ-5455-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.613,false,"NA"]
["TCGA-KIRC","TCGA-CZ-5466-01A","7:PRKAG2:151556161:-:17:RPL38:74203693:+:fusion","PRKAG2--RPL38",2.0,566.0,1.0,0.0,0.369,false,0.0117370892019]
["TCGA-KIRC","TCGA-CZ-5468-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.991,true,"NA"]
["TCGA-KIRC","TCGA-DV-5565-01A","4:ADD1:2844024:FAM193A:2708146:rev:+","ADD1--FAM193A",1.0,79.0,2.0,0.0,0.999,false,"NA"]
["TCGA-KIRC","TCGA-DV-5574-01A","7:SUMF2:56073111:CCT6A:56060269:rev:+","SUMF2--CCT6A",1.0,5.0,9.0,3.0,0.822,false,"NA"]
["TCGA-KIRC","TCGA-EU-5907-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.945,true,"NA"]
["TCGA-KIRC","TCGA-G6-A8L8-01A","14:NEDD8-MDP1:24217186:NEDD8:24218215:rev:-","NEDD8-MDP1--NEDD8",1.0,64.0,17.0,4.0,0.851,false,"NA"]
["TCGA-KIRP","TCGA-2Z-A9J2-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.744,true,"NA"]
["TCGA-KIRP","TCGA-2Z-A9J7-01A","6:TUBB:30722262:+:17:NPEPPS:47619737:+:fusion","TUBB--NPEPPS",3.0,5918.0,1.0,1.0,0.212,true,0.0188087774295]
["TCGA-KIRP","TCGA-2Z-A9JD-01A","12:ATP5B:56642673:-:12:CTDSP2:57823727:-:rev","ATP5B--CTDSP2",2.0,0.0,1.0,0.0,0.349,false,0.0484848484848]
["TCGA-KIRP","TCGA-2Z-A9JI-01A","20:C20orf27:3758536:-:5:RACK1:181239177:-:fusion","C20orf27--RACK1",3.0,0.0,1.0,0.0,0.151,false,0.0491228070175]
["TCGA-KIRP","TCGA-2Z-A9JN-01A","1:ATP1A1:116401260:+:6:PHIP:78970173:-:fusion","ATP1A1--PHIP",8.0,0.0,2.0,0.0,0.187,false,0.0233918128655]
["TCGA-KIRP","TCGA-2Z-A9JN-01A","4:SPP1:87981535:+:3:DHX30:47849867:+:fusion","SPP1--DHX30",39.0,0.0,1.0,0.0,0.459756303197643,false,0.054347826087]
["TCGA-KIRP","TCGA-2Z-A9JR-01A","20:PTPRA:3021428:+:7:PDIA4:149006053:-:fusion","PTPRA--PDIA4",5.0,0.0,32.0,0.0,0.16,false,0.0238095238095]
["TCGA-KIRP","TCGA-5P-A9JW-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.454,false,"NA"]
["TCGA-KIRP","TCGA-5P-A9JW-01A","19:FTL:48965916:+:22:RPS19BP1:39532093:-:fusion","FTL--RPS19BP1",2.0,0.0,1.0,0.0,0.3,false,0.0402298850575]
["TCGA-KIRP","TCGA-5P-A9K4-01A","14:SERPINA1:94382960:-:7:CUX1:102158560:+:fusion","SERPINA1--CUX1",6.0,0.0,1.0,0.0,0.624,false,0.0180722891566]
["TCGA-KIRP","TCGA-5P-A9K6-01A","15:B2M:44717791:+:19:MYADM:53872712:+:fusion","B2M--MYADM",3.0,1.0,2.0,0.0,0.179,false,0.0817438692098]
["TCGA-KIRP","TCGA-5P-A9K9-01A","19:CALR:12944403:+:12:TPI1:6867420:+:fusion","CALR--TPI1",3.0,0.0,3.0,0.0,0.425,false,0.0483271375465]
["TCGA-KIRP","TCGA-5P-A9KC-01A","4:SPP1:87981798:+:X:XPNPEP2:129767603:+:fusion","SPP1--XPNPEP2",3.0,0.0,2.0,0.0,0.161,false,0.0271903323263]
["TCGA-KIRP","TCGA-5P-A9KH-01A","11:RPLP2:812633:+:5:TBC1D9B:179865360:-:fusion","RPLP2--TBC1D9B",2.0,1.0,1.0,0.0,0.323,false,0.053125]
["TCGA-KIRP","TCGA-A4-7828-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.441,true,"NA"]
["TCGA-KIRP","TCGA-A4-7996-01A","7:ACTB:5529161:-:1:GADD45A:67686025:+:fusion","ACTB--GADD45A",1.0,0.0,1.0,0.0,0.637,false,0.0103092783505]
["TCGA-KIRP","TCGA-A4-A48D-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",1.0,4574.0,830.0,638.0,0.94,true,0.0]
["TCGA-KIRP","TCGA-A4-A5DU-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.565,false,"NA"]
["TCGA-KIRP","TCGA-AL-A5DJ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",17.0,0.0,1758.0,0.0,0.844500036455611,false,"NA"]
["TCGA-KIRP","TCGA-AT-A5NU-01A","11:CD151:837354:+:21:APP:25881771:-:fusion","CD151--APP",2.0,0.0,1.0,0.0,0.422,false,0.0047619047619]
["TCGA-KIRP","TCGA-B1-A47M-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",15.0,0.0,1126.0,0.0,0.411,false,"NA"]
["TCGA-KIRP","TCGA-B1-A656-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",3.0,5703.0,236.0,234.0,0.472,true,"NA"]
["TCGA-KIRP","TCGA-B9-4116-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.984,true,"NA"]
["TCGA-KIRP","TCGA-B9-5156-01A","11:CRYAB:111908766:-:11:ANO9:428199:-:reg","CRYAB--ANO9",3.0,0.0,1.0,0.0,0.187,false,0.0345744680851]
["TCGA-KIRP","TCGA-B9-A5W7-01A","9:DCAF10:37819401:TRMT10B:37763629:rev:+","DCAF10--TRMT10B",1.0,0.0,1.0,0.0,0.847,false,"NA"]
["TCGA-KIRP","TCGA-BQ-5875-01A","4:MRFAP1:6641258:+:2:ASXL2:25743056:-:fusion","MRFAP1--ASXL2",15.0,0.0,12.0,0.0,0.525,false,0.00699300699301]
["TCGA-KIRP","TCGA-BQ-5879-01A","1:ZCCHC11:52409486:-:22:PLXNB2:50276906:-:fusion","ZCCHC11--PLXNB2",2.0,0.0,1.0,0.0,0.178,false,0.0165289256198]
["TCGA-KIRP","TCGA-BQ-5886-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",9.0,726.0,603.0,54.0,0.482,true,"NA"]
["TCGA-KIRP","TCGA-BQ-5888-01A","5:PCDHA4:140809572:CYSTM1:140243305:rev:+","PCDHA4--CYSTM1",2.0,0.0,1.0,0.0,0.405,false,"NA"]
["TCGA-KIRP","TCGA-BQ-5893-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.611,false,0.00536193029491]
["TCGA-KIRP","TCGA-BQ-7044-01A","9:FPGS:127807775:+:4:SPP1:87976880:+:fusion","FPGS--SPP1",3.0,0.0,1.0,0.0,0.204,false,0.0364583333333]
["TCGA-KIRP","TCGA-BQ-7055-01A","19:HNRNPL:38852296:SIRT2:38883756:rev:-","HNRNPL--SIRT2",1.0,0.0,1.0,0.0,0.917,false,"NA"]
["TCGA-KIRP","TCGA-BQ-7058-01A","11:OAF:120226996:+:11:TRIM5:5664173:-:strandcross","OAF--TRIM5",1.0,107.0,1.0,0.0,0.695,false,0.00342465753425]
["TCGA-KIRP","TCGA-DW-5561-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,495.0,0.0,0.404,false,"NA"]
["TCGA-KIRP","TCGA-DW-7837-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",6.0,0.0,1758.0,0.0,0.485,false,"NA"]
["TCGA-KIRP","TCGA-DZ-6131-01A","15:FSD2:82796250:-:3:AC115284.1:51971698:-:fusion","FSD2--AC115284.1",4.0,514.0,1.0,1.0,0.235,true,0.0197628458498]
["TCGA-KIRP","TCGA-DZ-6133-01A","17:NPEPPS:47621968:+:1:B4GALT2:43979936:+:fusion","NPEPPS--B4GALT2",2.0,0.0,1.0,0.0,0.361,false,0.0168269230769]
["TCGA-KIRP","TCGA-DZ-6134-01A","8:CLU:27598460:-:14:LGMN:92704247:-:fusion","CLU--LGMN",5.0,0.0,1.0,0.0,0.193,false,0.0305010893246]
["TCGA-KIRP","TCGA-F9-A7Q0-01A","19:EEF2:3977819:-:15:NEIL1:75354431:+:fusion","EEF2--NEIL1",2.0,0.0,1.0,0.0,0.282,false,0.0204918032787]
["TCGA-KIRP","TCGA-G7-6790-01A","19:NOP53:47745783:DHX34:47381980:rev:+","NOP53--DHX34",1.0,42.0,60.0,15.0,0.89,false,"NA"]
["TCGA-KIRP","TCGA-G7-A4TM-01A","6:ZNRD1ASP:30008632:-:6:HLA-C:31270331:-:rev","ZNRD1ASP--HLA-C",2.0,164.0,16.0,11.0,0.589,true,0.010060362173]
["TCGA-KIRP","TCGA-GL-7966-01A","8:ZFHX4:76681620:LINC01111:76518800:rev:+","ZFHX4--LINC01111",1.0,0.0,1.0,0.0,0.902,false,"NA"]
["TCGA-KIRP","TCGA-HE-7130-01A","11:ALDH3B2:67665285:-:11:RCE1:66844869:+:strandcross","ALDH3B2--RCE1",2.0,0.0,1.0,0.0,0.333,false,0.0220588235294]
["TCGA-KIRP","TCGA-HE-A5NH-01A","17:LGALS3BP:78971256:-:12:HSP90B1:103938238:+:fusion","LGALS3BP--HSP90B1",5.0,0.0,20.0,0.0,0.303,false,0.03125]
["TCGA-KIRP","TCGA-IA-A40X-01A","1:IGSF3:116574409:-:11:KDM2A:67240301:+:fusion","IGSF3--KDM2A",3.0,0.0,3.0,0.0,0.16,false,0.0126050420168]
["TCGA-KIRP","TCGA-IZ-A6M9-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",2.0,2732.0,181.0,181.0,0.534,true,"NA"]
["TCGA-KIRP","TCGA-KV-A6GE-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",11.0,0.0,423.0,0.0,0.494,false,"NA"]
["TCGA-KIRP","TCGA-MH-A55Z-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",9.0,7942.0,781.0,771.0,0.253,true,0.0141242937853]
["TCGA-KIRP","TCGA-MH-A857-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",18.0,2010.0,1976.0,1665.0,0.511425409423474,true,0.00875273522976]
["TCGA-KIRP","TCGA-P4-A5E6-01A","1:RHOC:112702563:-:1:S100A6:153535933:-:rev","RHOC--S100A6",2.0,0.0,3.0,0.0,0.454,false,0.00742574257426]
["TCGA-KIRP","TCGA-P4-A5E8-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.313,false,0.00757575757576]
["TCGA-KIRP","TCGA-P4-AAVK-01A","16:ALDOA:30068978:+:2:STARD7:96187301:-:fusion","ALDOA--STARD7",4.0,0.0,2.0,0.0,0.243,false,0.0451127819549]
["TCGA-KIRP","TCGA-PJ-A5Z8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.611,false,"NA"]
["TCGA-KIRP","TCGA-SX-A71W-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.775,true,"NA"]
["TCGA-KIRP","TCGA-UZ-A9PK-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.824,true,"NA"]
["TCGA-KIRP","TCGA-UZ-A9PS-01A","8:CLU:27599780:-:2:PDIA6:10787439:-:fusion","CLU--PDIA6",2.0,0.0,1.0,0.0,0.405,false,0.0204081632653]
["TCGA-KIRP","TCGA-UZ-A9PU-01A","3:SUCLG2-AS1:67655102:+:3:SUCLG2:67529186:-:strandcross","SUCLG2-AS1--SUCLG2",1.0,0.0,3.0,0.0,0.63,false,0.016393442623]
["TCGA-KIRP","TCGA-WN-AB4C-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.544,false,"NA"]
["TCGA-LAML","TCGA-AB-2806-03A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",7.0,0.0,297.0,0.0,0.308,false,0.0075]
["TCGA-LAML","TCGA-AB-2814-03A","17:EIF4A1:7572864:+:17:PHF23:7237660:-:strandcross","EIF4A1--PHF23",2.0,10.0,7.0,4.0,0.77,true,0.00381679389313]
["TCGA-LAML","TCGA-AB-2822-03A","6:HLA-E:30489595:+:6:HLA-B:31356957:-:strandcross","HLA-E--HLA-B",3.0,10194.0,137.0,137.0,0.173,true,0.0]
["TCGA-LAML","TCGA-AB-2832-03A","19:RPL28:55388343:+:5:AC113398.1:124809233:-:fusion","RPL28--AC113398.1",1.0,2.0,1.0,0.0,0.994,false,0.0]
["TCGA-LAML","TCGA-AB-2848-03A","21:LINC00649:33943145:IFNGR2:33426884:rev:+","LINC00649--IFNGR2",2.0,1150.0,53.0,15.0,0.515,true,"NA"]
["TCGA-LAML","TCGA-AB-2857-03A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.631,true,"NA"]
["TCGA-LAML","TCGA-AB-2879-03A","12:CPSF6:69262562:+:1:IRF2BP2:234607852:-:fusion","CPSF6--IRF2BP2",1.0,17.0,7.0,1.0,0.797,false,0.0100502512563]
["TCGA-LAML","TCGA-AB-2891-03A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.917,true,"NA"]
["TCGA-LAML","TCGA-AB-2913-03A","7:EIF2AK1:6046777:-:1:MROH7-TTC4:54651949:+:fusion","EIF2AK1--MROH7-TTC4",3.0,494.0,8.0,8.0,0.191,true,0.00746268656716]
["TCGA-LAML","TCGA-AB-2920-03B","10:ANXA7:73377445:USP54:73545672:rev:-","ANXA7--USP54",1.0,444.0,49.0,27.0,0.954,false,"NA"]
["TCGA-LAML","TCGA-AB-2932-03A","6:PNRC1:89085160:+:12:LYZ:69348386:+:fusion","PNRC1--LYZ",2.0,0.0,1.0,0.0,0.372,false,0.0043956043956]
["TCGA-LAML","TCGA-AB-2956-03A","11:C11orf98:62664849:LBHD1:62667747:rev:-","C11orf98--LBHD1",1.0,0.0,1.0,0.0,0.914,false,"NA"]
["TCGA-LAML","TCGA-AB-2971-03A","15:RPS17:82538306:-:4:RPL9:39458925:-:fusion","RPS17--RPL9",2.0,0.0,1.0,0.0,0.153,false,0.0263157894737]
["TCGA-LAML","TCGA-AB-2985-03A","1:AKR1A1:45568177:+:10:AKR1C2:4995865:-:fusion","AKR1A1--AKR1C2",3.0,0.0,4.0,0.0,0.184,false,0.00947867298578]
["TCGA-LAML","TCGA-AB-3005-03A","5:RACK1:181238099:-:3:RPL32:12841546:-:fusion","RACK1--RPL32",4.0,276.0,4.0,0.0,0.198,false,0.00273224043716]
["TCGA-LGG","TCGA-CS-4941-01A","17:GFAP:44906885:-:11:SART1:65965342:+:fusion","GFAP--SART1",1.0,0.0,1.0,0.0,0.877,false,0.00420168067227]
["TCGA-LGG","TCGA-CS-4944-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.901,true,"NA"]
["TCGA-LGG","TCGA-CS-6665-01A","4:LNX1:53557874:-:4:DCUN1D4:51911070:+:strandcross","LNX1--DCUN1D4",1.0,0.0,1.0,0.0,0.683,false,0.0122324159021]
["TCGA-LGG","TCGA-CS-6667-01A","2:ZNF638:71276754:+:2:LINC01830:21933547:-:strandcross","ZNF638--LINC01830",1.0,0.0,1.0,0.0,0.962,false,0.0]
["TCGA-LGG","TCGA-DB-5276-01A","1:CLSTN1:9729026:-:7:RBM28:128315020:-:fusion","CLSTN1--RBM28",2.0,0.0,1.0,0.0,0.244,false,0.0441176470588]
["TCGA-LGG","TCGA-DB-5279-01A","17:GFAP:44910618:-:17:CCDC47:63764793:-:rev","GFAP--CCDC47",4.0,0.0,2.0,0.0,0.254,false,0.0443686006826]
["TCGA-LGG","TCGA-DB-A4XH-01A","1:NDUFS2:161214296:+:19:ATP1A3:41993467:-:fusion","NDUFS2--ATP1A3",4.0,42.0,28.0,0.0,0.179,false,0.0172413793103]
["TCGA-LGG","TCGA-DB-A64L-01A","7:ACTB:5528470:-:14:BTBD6:105248671:+:fusion","ACTB--BTBD6",5.0,0.0,13.0,0.0,0.171,false,0.0849420849421]
["TCGA-LGG","TCGA-DB-A64S-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",12.0,2010.0,1976.0,1665.0,0.475,true,0.0174825174825]
["TCGA-LGG","TCGA-DB-A75O-01A","17:GFAP:44906885:-:17:SLC9A3R1:74763367:+:strandcross","GFAP--SLC9A3R1",2.0,0.0,1.0,0.0,0.512,false,0.0122950819672]
["TCGA-LGG","TCGA-DH-5142-01A","1:SNAPIN:153661830:+:14:AL157871.1:100291117:+:fusion","SNAPIN--AL157871.1",2.0,0.0,1.0,0.0,0.241,false,0.0349206349206]
["TCGA-LGG","TCGA-DH-A66B-01A","1:STMN1:25900568:-:15:POLG:89316778:-:fusion","STMN1--POLG",8.0,0.0,1.0,0.0,0.259,false,0.03081232493]
["TCGA-LGG","TCGA-DH-A66G-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.836,true,"NA"]
["TCGA-LGG","TCGA-DU-5853-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.422,false,"NA"]
["TCGA-LGG","TCGA-DU-5855-01A","8:CPQ:96645402:SDC2:96593480:rev:+","CPQ--SDC2",1.0,42.0,76.0,19.0,0.809,false,"NA"]
["TCGA-LGG","TCGA-DU-6392-01A","22:TXN2:36480575:-:17:AC135178.2:8383187:-:fusion","TXN2--AC135178.2",2.0,0.0,1.0,0.0,0.286,false,0.0325203252033]
["TCGA-LGG","TCGA-DU-6397-01A","3:METTL6:15415772:EAF1-AS1:15453931:rev:-","METTL6--EAF1-AS1",1.0,0.0,1.0,0.0,0.913,false,"NA"]
["TCGA-LGG","TCGA-DU-6403-01A","1:LMO4:87340202:SH3GLB1:86715724:rev:+","LMO4--SH3GLB1",1.0,0.0,1.0,0.0,0.855,false,"NA"]
["TCGA-LGG","TCGA-DU-6407-02A","11:STT3A:125620888:+:18:AC110597.3:67506589:+:fusion","STT3A--AC110597.3",4.0,798.0,11.0,11.0,0.298,true,0.0164473684211]
["TCGA-LGG","TCGA-DU-6407-02B","6:SENP6:75659407:+:6:ICK:53041408:-:strandcross","SENP6--ICK",2.0,0.0,1.0,0.0,0.334,false,0.0155210643016]
["TCGA-LGG","TCGA-DU-7010-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.781,true,"NA"]
["TCGA-LGG","TCGA-DU-7013-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",83.0,2010.0,1976.0,1665.0,0.641987914468897,true,0.0181405895692]
["TCGA-LGG","TCGA-DU-7299-01A","10:TACC2:122209969:+:18:RAB31:9859228:+:fusion","TACC2--RAB31",1.0,349.0,1.0,0.0,0.798,false,0.00845070422535]
["TCGA-LGG","TCGA-DU-7304-02A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",33.0,0.0,495.0,0.0,0.748367480117536,false,"NA"]
["TCGA-LGG","TCGA-DU-8164-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.686,true,"NA"]
["TCGA-LGG","TCGA-DU-8166-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.48,false,"NA"]
["TCGA-LGG","TCGA-DU-A5TY-01A","15:CTDSPL2:44459200:CASC4:44331988:rev:+","CTDSPL2--CASC4",2.0,0.0,1.0,0.0,0.631,false,"NA"]
["TCGA-LGG","TCGA-DU-A6S2-01A","2:SLC8A1-AS1:40042473:AC007388.1:39665087:rev:+","SLC8A1-AS1--AC007388.1",2.0,2345.0,9.0,7.0,0.493,true,"NA"]
["TCGA-LGG","TCGA-DU-A7T8-01A","12:AC068768.1:123259043:RILPL2:123430659:rev:-","AC068768.1--RILPL2",1.0,0.0,1.0,0.0,0.919,false,"NA"]
["TCGA-LGG","TCGA-DU-A7TG-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",14.0,2324.0,521.0,517.0,0.369,true,0.0192307692308]
["TCGA-LGG","TCGA-E1-5311-01A","7:ZNF736:64336982:+:16:CHMP1A:89647331:-:fusion","ZNF736--CHMP1A",2.0,73.0,38.0,17.0,0.302,false,0.0235934664247]
["TCGA-LGG","TCGA-E1-A7YE-01A","2:AGBL5-IT1:27061206:RAB10:26127144:rev:+","AGBL5-IT1--RAB10",2.0,1167.0,30.0,24.0,0.525,false,"NA"]
["TCGA-LGG","TCGA-E1-A7YI-01A","19:UBA52:18572607:+:3:SMARCC1:47706530:-:fusion","UBA52--SMARCC1",3.0,744.0,27.0,26.0,0.312,true,0.00473933649289]
["TCGA-LGG","TCGA-E1-A7YQ-01A","11:DYNC2H1:103156770:+:1:PUM1:30992660:-:fusion","DYNC2H1--PUM1",5.0,0.0,91.0,0.0,0.162,false,0.00526315789474]
["TCGA-LGG","TCGA-E1-A7Z2-01A","14:CKB:103520122:-:9:ABCA2:137014038:-:fusion","CKB--ABCA2",7.0,0.0,9.0,0.0,0.182,false,0.0444444444444]
["TCGA-LGG","TCGA-FG-5963-02A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.478,false,"NA"]
["TCGA-LGG","TCGA-FG-5965-02B","16:NME3:1771280:-:11:ARHGAP1:46679225:-:fusion","NME3--ARHGAP1",4.0,0.0,2.0,0.0,0.22,false,0.0477815699659]
["TCGA-LGG","TCGA-FG-7637-01A","2:FOXN2:48314814:MSH2:47445548:rev:+","FOXN2--MSH2",1.0,0.0,2.0,0.0,0.815,false,"NA"]
["TCGA-LGG","TCGA-FG-7643-01A","11:FCHSD2:73083695:RAB6A:73730823:rev:-","FCHSD2--RAB6A",1.0,0.0,2.0,0.0,0.91,false,"NA"]
["TCGA-LGG","TCGA-FG-8187-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.87,true,"NA"]
["TCGA-LGG","TCGA-FG-A4MY-01A","17:GFAP:44905714:-:12:RDH5:55721153:+:fusion","GFAP--RDH5",6.0,0.0,4.0,0.0,0.246,false,0.0534759358289]
["TCGA-LGG","TCGA-FG-A6J1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.998,true,"NA"]
["TCGA-LGG","TCGA-FG-A70Z-01A","11:SLC15A3:60937161:-:17:GFAP:44906164:-:fusion","SLC15A3--GFAP",5.0,0.0,12.0,0.0,0.25,false,0.0341685649203]
["TCGA-LGG","TCGA-FG-A710-01A","9:SPTAN1:128632718:+:16:TMEM186:8780761:-:fusion","SPTAN1--TMEM186",4.0,0.0,1.0,0.0,0.277,false,0.0402144772118]
["TCGA-LGG","TCGA-HT-7470-01A","7:ACTB:5528470:-:1:HSPG2:21833384:-:fusion","ACTB--HSPG2",2.0,0.0,19.0,0.0,0.323,false,0.0516605166052]
["TCGA-LGG","TCGA-HT-7478-01A","12:SPRYD3:53073286:-:1:AKR1A1:45568614:+:fusion","SPRYD3--AKR1A1",15.0,0.0,2.0,0.0,0.539,false,0.0198675496689]
["TCGA-LGG","TCGA-HT-7482-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.418,true,"NA"]
["TCGA-LGG","TCGA-HT-7603-01A","1:SNX27:151612512:AL355860.1:150912242:rev:+","SNX27--AL355860.1",1.0,0.0,1.0,0.0,0.98,false,"NA"]
["TCGA-LGG","TCGA-HT-7611-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.788,true,"NA"]
["TCGA-LGG","TCGA-HT-7620-01A","10:ANXA7:73377445:USP54:73545672:rev:-","ANXA7--USP54",2.0,444.0,49.0,27.0,0.995,true,"NA"]
["TCGA-LGG","TCGA-HT-7691-01A","12:ATP5B:56645837:PRIM1:56734245:rev:-","ATP5B--PRIM1",1.0,0.0,1.0,0.0,0.963,false,"NA"]
["TCGA-LGG","TCGA-HT-7693-01A","19:FKBP8:18531762:-:11:AC124057.1:2404515:+:fusion","FKBP8--AC124057.1",5.0,0.0,2.0,0.0,0.213,false,0.0416666666667]
["TCGA-LGG","TCGA-HT-7856-01A","5:NIPBL:36877178:SLC1A3:36671029:rev:+","NIPBL--SLC1A3",1.0,2.0,4.0,1.0,0.833,false,"NA"]
["TCGA-LGG","TCGA-HT-7880-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.494,true,"NA"]
["TCGA-LGG","TCGA-HT-8010-01A","2:SPTBN1:54526566:ACYP2:54304688:rev:+","SPTBN1--ACYP2",1.0,3.0,13.0,3.0,0.973,false,"NA"]
["TCGA-LGG","TCGA-HT-8018-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",59.0,2010.0,1976.0,1665.0,0.804792606638439,true,0.0173410404624]
["TCGA-LGG","TCGA-HT-8105-01A","2:OLA1:174223033:CIR1:174351725:rev:-","OLA1--CIR1",1.0,1.0,3.0,1.0,0.99,false,"NA"]
["TCGA-LGG","TCGA-HT-8563-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.822,true,"NA"]
["TCGA-LGG","TCGA-HT-8564-01A","21:URB1:32353933:-:16:FUS:31188325:+:fusion","URB1--FUS",1.0,0.0,1.0,0.0,0.921,false,0.00258397932817]
["TCGA-LGG","TCGA-HT-A5RC-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",52.0,2010.0,1976.0,1665.0,0.701062935619822,true,0.0101694915254]
["TCGA-LGG","TCGA-HT-A617-01A","1:B4GALT2:43979083:+:16:MT2A:56608584:+:fusion","B4GALT2--MT2A",9.0,0.0,3.0,0.0,0.191,false,0.0323624595469]
["TCGA-LGG","TCGA-HT-A74H-01A","1:AC099792.1:60825336:NFIA-AS2:60954602:rev:-","AC099792.1--NFIA-AS2",1.0,0.0,1.0,0.0,0.803,false,"NA"]
["TCGA-LGG","TCGA-HT-A74J-01A","4:MRFAP1:6641258:+:19:AC020909.2:50487638:-:fusion","MRFAP1--AC020909.2",22.0,0.0,12.0,0.0,0.627118440301754,false,0.01393728223]
["TCGA-LGG","TCGA-HT-A74O-01A","17:GFAP:44905714:-:19:LILRB4:54667873:+:fusion","GFAP--LILRB4",5.0,0.0,3.0,0.0,0.237,false,0.0188679245283]
["TCGA-LGG","TCGA-HW-8321-01A","8:CLU:27605141:-:17:TMEM100:55721798:-:fusion","CLU--TMEM100",2.0,0.0,9.0,0.0,0.309,false,0.0238095238095]
["TCGA-LGG","TCGA-HW-A5KK-01A","17:GFAP:44905714:-:14:DDX24:94081198:-:fusion","GFAP--DDX24",13.0,0.0,9.0,0.0,0.282,false,0.0332225913621]
["TCGA-LGG","TCGA-P5-A5ET-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",14.0,2010.0,1976.0,1665.0,0.891,true,0.0120967741935]
["TCGA-LGG","TCGA-P5-A5EW-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",56.0,2010.0,1976.0,1665.0,0.814060843530438,true,0.00851063829787]
["TCGA-LGG","TCGA-P5-A72W-01A","1:NFIA:61455526:+:17:RPL38:74203693:+:fusion","NFIA--RPL38",2.0,1824.0,1.0,0.0,0.319,false,0.00917431192661]
["TCGA-LGG","TCGA-P5-A72Z-01A","17:GFAP:44907205:-:16:CYBA:88646838:-:fusion","GFAP--CYBA",3.0,0.0,1.0,0.0,0.203,false,0.0278422273782]
["TCGA-LGG","TCGA-QH-A65S-01A","17:GFAP:44905714:-:11:GSTP1:67584464:+:fusion","GFAP--GSTP1",3.0,0.0,6.0,0.0,0.232,false,0.0205278592375]
["TCGA-LGG","TCGA-QH-A65X-01A","22:SREBF2:41880992:+:2:CTNNA2:80647585:+:fusion","SREBF2--CTNNA2",1.0,0.0,1.0,0.0,0.799,false,0.00403225806452]
["TCGA-LGG","TCGA-QH-A6CX-01A","19:CERS1:18884087:COPE:18905629:rev:-","CERS1--COPE",1.0,0.0,1.0,0.0,0.884,false,"NA"]
["TCGA-LGG","TCGA-QH-A6X4-01A","11:CRYAB:111911524:-:9:POMT1:131502902:+:fusion","CRYAB--POMT1",2.0,0.0,1.0,0.0,0.237,false,0.026525198939]
["TCGA-LGG","TCGA-R8-A6YH-01A","18:SEC11C:59140035:ZNF532:58979055:rev:+","SEC11C--ZNF532",1.0,0.0,1.0,0.0,0.967,false,"NA"]
["TCGA-LGG","TCGA-RY-A83X-01A","4:CRMP1:5888228:JAKMIP1:6112997:rev:-","CRMP1--JAKMIP1",1.0,0.0,1.0,0.0,0.811,false,"NA"]
["TCGA-LGG","TCGA-S9-A6TS-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",40.0,2324.0,521.0,517.0,0.220609087594553,true,0.0116279069767]
["TCGA-LGG","TCGA-S9-A6U2-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",85.0,2010.0,1976.0,1665.0,0.661498295865027,true,0.0111856823266]
["TCGA-LGG","TCGA-S9-A6UA-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",2.0,2052.0,512.0,403.0,0.471,false,"NA"]
["TCGA-LGG","TCGA-S9-A6WO-01A","7:PTN:137343439:DGKI:137412207:rev:-","PTN--DGKI",1.0,0.0,1.0,0.0,0.994,false,"NA"]
["TCGA-LGG","TCGA-S9-A7IQ-01A","17:WBP2:75845837:-:19:HPN:35041722:+:fusion","WBP2--HPN",2.0,0.0,1.0,0.0,0.35,false,0.047619047619]
["TCGA-LGG","TCGA-S9-A7QY-01A","12:TMTC2:83134302:+:6:SNX14:85543760:-:fusion","TMTC2--SNX14",3.0,3.0,174.0,0.0,0.214,false,0.0542635658915]
["TCGA-LGG","TCGA-S9-A7QZ-01A","2:RPL37A:216500031:XRCC5:216160068:rev:+","RPL37A--XRCC5",1.0,1.0,3.0,0.0,0.962,false,"NA"]
["TCGA-LGG","TCGA-TM-A7CF-01A","8:AGO2:140547468:-:12:DNAH10:123893233:+:fusion","AGO2--DNAH10",1.0,0.0,1.0,0.0,0.69,false,0.0324074074074]
["TCGA-LGG","TCGA-TM-A84G-01A","16:MGRN1:4625048:HMOX2:4496146:rev:+","MGRN1--HMOX2",1.0,470.0,108.0,36.0,0.811,false,"NA"]
["TCGA-LGG","TCGA-TM-A84T-01A","12:PCBP2:53479683:+:18:AC093330.1:76978833:+:fusion","PCBP2--AC093330.1",5.0,161.0,2.0,0.0,0.233,false,0.0403587443946]
["TCGA-LGG","TCGA-TQ-A7RK-02A","19:APOE:44909393:+:15:DUT:48341515:+:fusion","APOE--DUT",2.0,0.0,5.0,0.0,0.157,false,0.0532319391635]
["TCGA-LGG","TCGA-TQ-A7RM-01A","17:GFAP:44911672:-:12:PRPH:49297357:+:fusion","GFAP--PRPH",3.0,843.0,1.0,1.0,0.174,true,0.0545073375262]
["TCGA-LGG","TCGA-TQ-A7RW-01A","22:TRMT2A:20113686:-:17:GFAP:44915078:-:fusion","TRMT2A--GFAP",3.0,0.0,4.0,0.0,0.262,false,0.0320284697509]
["TCGA-LGG","TCGA-VM-A8CD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.713,true,"NA"]
["TCGA-LGG","TCGA-WY-A858-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.666,false,"NA"]
["TCGA-LIHC","TCGA-2V-A95S-01A","1:CLK2:155262868:GON4L:155784389:rev:-","CLK2--GON4L",2.0,869.0,24.0,22.0,0.406,false,"NA"]
["TCGA-LIHC","TCGA-2Y-A9GV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.701,true,"NA"]
["TCGA-LIHC","TCGA-2Y-A9H1-01A","5:FAXDC2:154818494:AC010476.1:155111664:rev:-","FAXDC2--AC010476.1",6.0,0.0,46.0,0.0,0.463,false,"NA"]
["TCGA-LIHC","TCGA-2Y-A9HA-01A","6:WDR27:169632947:PSMB1:170549113:rev:-","WDR27--PSMB1",1.0,0.0,3.0,0.0,0.936,false,"NA"]
["TCGA-LIHC","TCGA-2Y-A9HB-01A","6:PPP1R10:30618558:-:17:UBB:16382359:+:fusion","PPP1R10--UBB",2.0,1.0,1.0,0.0,0.221,false,0.0209973753281]
["TCGA-LIHC","TCGA-BC-4072-01B","4:MRFAP1:6642729:+:17:NME2:51168019:+:fusion","MRFAP1--NME2",12.0,0.0,1.0,0.0,0.202,false,0.0151515151515]
["TCGA-LIHC","TCGA-BC-A10R-01A","4:AFF1:86948571:+:1:LINC01133:159976644:+:fusion","AFF1--LINC01133",1.0,0.0,1.0,0.0,0.806,false,0.00287356321839]
["TCGA-LIHC","TCGA-BC-A10X-01A","4:FGG:154604897:-:3:TTC21A:39109085:+:fusion","FGG--TTC21A",2.0,0.0,1.0,0.0,0.208,false,0.0152505446623]
["TCGA-LIHC","TCGA-BC-A110-01A","X:SAT1:23783883:+:14:SERPINA1:94379611:-:fusion","SAT1--SERPINA1",2.0,0.0,1.0,0.0,0.413,false,0.00917431192661]
["TCGA-LIHC","TCGA-BC-A217-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",10.0,0.0,1758.0,0.0,0.656,false,"NA"]
["TCGA-LIHC","TCGA-BC-A69I-01A","19:APOC1:44919209:+:2:TTLL4:218754231:+:fusion","APOC1--TTLL4",2.0,0.0,1.0,0.0,0.279,false,0.0251798561151]
["TCGA-LIHC","TCGA-BD-A2L6-01A","19:APOC2:44948860:CBLC:44784264:rev:+","APOC2--CBLC",1.0,0.0,3.0,0.0,0.942,false,"NA"]
["TCGA-LIHC","TCGA-CC-5259-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",3.0,7.0,180.0,0.0,0.444,false,"NA"]
["TCGA-LIHC","TCGA-CC-5262-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.442,false,"NA"]
["TCGA-LIHC","TCGA-CC-A5UD-01A","11:STT3A:125620888:+:12:AC005841.1:2803938:-:fusion","STT3A--AC005841.1",7.0,6377.0,2.0,2.0,0.161,true,0.0393258426966]
["TCGA-LIHC","TCGA-CC-A5UE-01A","5:RACK1:181236945:-:12:SHMT2:57230703:+:fusion","RACK1--SHMT2",3.0,0.0,2.0,0.0,0.211,false,0.00633914421553]
["TCGA-LIHC","TCGA-CC-A7IH-01A","6:GCM2:10876445:ELOVL2:10983906:rev:-","GCM2--ELOVL2",2.0,0.0,1.0,0.0,0.424,false,"NA"]
["TCGA-LIHC","TCGA-CC-A8HU-01A","X:MAOB:43769307:-:19:APOE:44906602:+:fusion","MAOB--APOE",2.0,0.0,1.0,0.0,0.323,false,0.0309734513274]
["TCGA-LIHC","TCGA-DD-A115-01A","19:C3:6719211:-:2:AGXT:240877537:+:fusion","C3--AGXT",1.0,0.0,2.0,0.0,0.643,false,0.00636942675159]
["TCGA-LIHC","TCGA-DD-A11A-01A","11:NUDT22:64226297:+:4:FGB:154570419:+:fusion","NUDT22--FGB",2.0,0.0,1.0,0.0,0.153,false,0.0323529411765]
["TCGA-LIHC","TCGA-DD-A11C-01A","9:TRAF1:120923705:C5:120957368:rev:-","TRAF1--C5",1.0,0.0,1.0,0.0,0.829,false,"NA"]
["TCGA-LIHC","TCGA-DD-A1EI-01A","20:ZMYND8:47347856:-:20:STAU1:49154071:-:rev","ZMYND8--STAU1",1.0,1.0,1.0,0.0,0.66,false,0.00331125827815]
["TCGA-LIHC","TCGA-DD-A1EK-01A","3:ITIH1:52789854:+:1:APOA2:161222522:-:fusion","ITIH1--APOA2",1.0,0.0,1.0,0.0,0.8,false,0.00411522633745]
["TCGA-LIHC","TCGA-DD-A39Z-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,495.0,0.0,0.429,false,"NA"]
["TCGA-LIHC","TCGA-DD-A3A4-01A","3:ITIH4:52825886:-:19:FCGRT:49526010:+:fusion","ITIH4--FCGRT",1.0,0.0,1.0,0.0,0.926,false,0.00751879699248]
["TCGA-LIHC","TCGA-DD-A3A9-01A","17:RPA1:1830126:+:17:AC005291.2:10317498:+:reg","RPA1--AC005291.2",3.0,0.0,1.0,0.0,0.263,false,0.00789473684211]
["TCGA-LIHC","TCGA-DD-A4NA-01A","15:B2M:44715701:+:9:TMEM141:136792819:+:fusion","B2M--TMEM141",2.0,0.0,1.0,0.0,0.428,false,0.0201342281879]
["TCGA-LIHC","TCGA-DD-A4NL-01A","19:C3:6678152:-:14:CIDEB:24307920:-:fusion","C3--CIDEB",4.0,0.0,6.0,0.0,0.555,false,0.0173611111111]
["TCGA-LIHC","TCGA-DD-A4NN-01A","17:MRPL38:75900308:-:11:AC132217.1:2129449:-:fusion","MRPL38--AC132217.1",2.0,0.0,1.0,0.0,0.219,false,0.0204778156997]
["TCGA-LIHC","TCGA-DD-A4NQ-01A","17:ACADVL:7222302:+:5:SQSTM1:179833587:+:fusion","ACADVL--SQSTM1",1.0,0.0,1.0,0.0,0.749,false,0.00627615062762]
["TCGA-LIHC","TCGA-DD-A4NV-01A","10:RBP4:93593823:-:X:THOC2:123619517:-:fusion","RBP4--THOC2",2.0,0.0,1.0,0.0,0.191,false,0.0290556900726]
["TCGA-LIHC","TCGA-DD-A73C-01A","19:AKAP8:15379713:AKAP8L:15380612:rev:-","AKAP8--AKAP8L",1.0,6.0,8.0,2.0,0.82,false,"NA"]
["TCGA-LIHC","TCGA-DD-A73F-01A","7:AZGP1:99971855:-:19:APOC2:44948763:+:fusion","AZGP1--APOC2",1.0,0.0,1.0,0.0,0.791,false,0.00497512437811]
["TCGA-LIHC","TCGA-DD-A73G-01A","18:TTR:31597279:+:19:APOE:44907760:+:fusion","TTR--APOE",5.0,0.0,1.0,0.0,0.223,false,0.00997506234414]
["TCGA-LIHC","TCGA-DD-AACF-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",4.0,29.0,70.0,0.0,0.438,false,"NA"]
["TCGA-LIHC","TCGA-DD-AACH-01A","12:ZNF384:6679220:MLF2:6748547:rev:-","ZNF384--MLF2",3.0,0.0,129.0,0.0,0.418,false,"NA"]
["TCGA-LIHC","TCGA-DD-AACP-01A","3:CEP63:134552012:TF:133764182:rev:+","CEP63--TF",1.0,0.0,1.0,0.0,0.906,false,"NA"]
["TCGA-LIHC","TCGA-DD-AACW-01A","19:APOE:44907952:+:8:PABPC1:100722087:-:fusion","APOE--PABPC1",3.0,7.0,9.0,0.0,0.167,false,0.0224719101124]
["TCGA-LIHC","TCGA-DD-AAD3-01A","8:CLU:27598537:-:3:AC006254.1:52823741:-:fusion","CLU--AC006254.1",4.0,0.0,3.0,0.0,0.207,false,0.0352941176471]
["TCGA-LIHC","TCGA-DD-AADF-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,495.0,0.0,0.593,false,"NA"]
["TCGA-LIHC","TCGA-DD-AADK-01A","3:PLD1:171771195:TMEM212-AS1:171876396:rev:-","PLD1--TMEM212-AS1",1.0,0.0,1.0,0.0,0.938,false,"NA"]
["TCGA-LIHC","TCGA-DD-AADR-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.683,true,"NA"]
["TCGA-LIHC","TCGA-DD-AADV-01A","4:FGG:154604897:-:19:PRKCSH:11447565:+:fusion","FGG--PRKCSH",3.0,0.0,1.0,0.0,0.214,false,0.0280112044818]
["TCGA-LIHC","TCGA-DD-AAE7-01A","19:LSR:35250659:HPN:35049290:rev:+","LSR--HPN",1.0,0.0,1.0,0.0,0.952,false,"NA"]
["TCGA-LIHC","TCGA-DD-AAEB-01A","19:SULT2A1:47882084:CARD8:48241063:rev:-","SULT2A1--CARD8",1.0,0.0,1.0,0.0,0.934,false,"NA"]
["TCGA-LIHC","TCGA-DD-AAVR-01A","17:APOH:66220554:-:1:EPHX1:225838654:+:fusion","APOH--EPHX1",1.0,0.0,1.0,0.0,0.736,false,0.00322580645161]
["TCGA-LIHC","TCGA-DD-AAVS-01A","1:PRCC:156782329:RRNAD1:156735725:rev:+","PRCC--RRNAD1",1.0,0.0,1.0,0.0,0.879,false,"NA"]
["TCGA-LIHC","TCGA-DD-AAW3-01A","1:ZMYM6:35020383:SFPQ:35178036:rev:-","ZMYM6--SFPQ",1.0,0.0,1.0,0.0,0.889,false,"NA"]
["TCGA-LIHC","TCGA-ED-A627-01A","4:ALB:73418311:+:11:BACE1:117289807:-:fusion","ALB--BACE1",6.0,0.0,6.0,0.0,0.495,false,0.016]
["TCGA-LIHC","TCGA-ED-A7PZ-01A","GL000194.1:AC145212.2:112792:-:1:C1orf53:197905796:+:fusion","AC145212.2--C1orf53",1.0,1.0,1.0,0.0,0.647,false,0.0025641025641]
["TCGA-LIHC","TCGA-EP-A12J-01A","2:NCL:231461681:-:1:APOA2:161223628:-:fusion","NCL--APOA2",1.0,0.0,1.0,0.0,0.674,false,0.0166666666667]
["TCGA-LIHC","TCGA-EP-A2KC-01A","1:GLUL:182382894:-:2:ITGA6:172487264:+:fusion","GLUL--ITGA6",4.0,0.0,1.0,0.0,0.389,false,0.0246913580247]
["TCGA-LIHC","TCGA-EP-A3RK-01A","14:SERPINA1:94379464:-:11:DGKZ:46375432:+:fusion","SERPINA1--DGKZ",2.0,0.0,1.0,0.0,0.228,false,0.0165289256198]
["TCGA-LIHC","TCGA-FV-A23B-01A","19:AP1M1:16206411:+:3:AHSG:186613085:+:fusion","AP1M1--AHSG",3.0,0.0,1.0,0.0,0.34,false,0.0272108843537]
["TCGA-LIHC","TCGA-FV-A3R2-01A","4:FGG:154604897:-:16:OGFOD1:56475507:+:fusion","FGG--OGFOD1",2.0,0.0,2.0,0.0,0.182,false,0.0336134453782]
["TCGA-LIHC","TCGA-FV-A496-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.298,true,0.0168776371308]
["TCGA-LIHC","TCGA-G3-A25S-01A","19:APOC2:44948860:APOC4-APOC2:44948466:rev:+","APOC2--APOC4-APOC2",1.0,45.0,40.0,20.0,0.855,false,"NA"]
["TCGA-LIHC","TCGA-G3-A25X-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",6.0,726.0,603.0,54.0,0.587,false,"NA"]
["TCGA-LIHC","TCGA-G3-A3CJ-01A","4:FGG:154604897:-:7:ABCB8:151045209:+:fusion","FGG--ABCB8",4.0,0.0,2.0,0.0,0.26,false,0.0322580645161]
["TCGA-LIHC","TCGA-G3-A3CK-01A","21:FTCD:46145417:-:1:GSTM4:109671287:+:fusion","FTCD--GSTM4",1.0,9.0,14.0,4.0,0.785,false,0.00536193029491]
["TCGA-LIHC","TCGA-G3-A7M5-01A","15:ST20-MTHFS:79845376:-:4:ALB:73413420:+:fusion","ST20-MTHFS--ALB",5.0,0.0,1.0,0.0,0.18,false,0.0200501253133]
["TCGA-LIHC","TCGA-G3-A7M8-01A","4:ALB:73417614:+:X:BCOR:40062937:-:fusion","ALB--BCOR",2.0,0.0,1.0,0.0,0.389,false,0.009375]
["TCGA-LIHC","TCGA-G3-AAV5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.505,false,"NA"]
["TCGA-LIHC","TCGA-GJ-A6C0-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.874,false,"NA"]
["TCGA-LIHC","TCGA-GJ-A9DB-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",1.0,198.0,115.0,72.0,0.907,false,"NA"]
["TCGA-LIHC","TCGA-K7-A6G5-01A","2:GGCX:85549830:-:19:AC008738.3:33299934:+:fusion","GGCX--AC008738.3",10.0,4054.0,2.0,2.0,0.697,true,0.00757575757576]
["TCGA-LIHC","TCGA-LG-A6GG-01A","1:TMEM167B:109093776:+:17:AC145207.3:81843165:+:fusion","TMEM167B--AC145207.3",2.0,5.0,4.0,0.0,0.19,false,0.0629139072848]
["TCGA-LIHC","TCGA-MI-A75E-01A","4:AFM:73484390:ALB:73410312:rev:+","AFM--ALB",1.0,0.0,1.0,0.0,0.897,false,"NA"]
["TCGA-LIHC","TCGA-MI-A75I-01A","16:AC109460.3:28978044:+:14:SERPINA1:94379611:-:fusion","AC109460.3--SERPINA1",2.0,0.0,1.0,0.0,0.366,false,0.011961722488]
["TCGA-LIHC","TCGA-NI-A8LF-01A","12:DRAM1:101877920:+:20:OVOL2:18041723:-:fusion","DRAM1--OVOL2",1.0,0.0,1.0,0.0,0.946,false,0.0084388185654]
["TCGA-LIHC","TCGA-PD-A5DF-01A","14:SERPINA1:94379464:-:11:HSPA8:123058484:-:fusion","SERPINA1--HSPA8",2.0,0.0,2.0,0.0,0.193,false,0.0347826086957]
["TCGA-LIHC","TCGA-RC-A6M4-01A","3:TF:133777238:+:8:GRINA:143991692:+:fusion","TF--GRINA",2.0,0.0,4.0,0.0,0.192,false,0.0408163265306]
["TCGA-LIHC","TCGA-T1-A6J8-01A","11:TRMT112:64317449:-:19:APOE:44906602:+:fusion","TRMT112--APOE",1.0,0.0,1.0,0.0,0.894,false,0.00540540540541]
["TCGA-LIHC","TCGA-WJ-A86L-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.598,false,"NA"]
["TCGA-LIHC","TCGA-XR-A8TD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.62,false,"NA"]
["TCGA-LIHC","TCGA-ZP-A9D2-01A","11:SERPING1:57600175:+:19:C3:6685146:-:fusion","SERPING1--C3",2.0,3.0,1.0,0.0,0.223,false,0.0397111913357]
["TCGA-LIHC","TCGA-ZP-A9D4-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.423,false,"NA"]
["TCGA-LIHC","TCGA-ZS-A9CG-01A","21:FTCD:46145417:-:1:GSTM4:109671287:+:fusion","FTCD--GSTM4",1.0,9.0,14.0,4.0,0.751,false,0.0]
["TCGA-LUAD","TCGA-05-4382-01A","1:S100A6:153535202:-:5:MCIDAS:55220806:-:fusion","S100A6--MCIDAS",2.0,0.0,1.0,0.0,0.261,false,0.0156626506024]
["TCGA-LUAD","TCGA-05-4395-01A","2:CERS6-AS1:168783955:-:7:STEAP2:90236891:+:fusion","CERS6-AS1--STEAP2",7.0,754.0,1.0,1.0,0.173,true,0.0296540362438]
["TCGA-LUAD","TCGA-05-4403-01A","11:ILK:6608489:+:2:COL3A1:189008054:+:fusion","ILK--COL3A1",1.0,0.0,1.0,0.0,0.925,false,0.0]
["TCGA-LUAD","TCGA-05-4415-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",1.0,9462.0,7336.0,7317.0,0.991,true,"NA"]
["TCGA-LUAD","TCGA-05-4427-01A","4:HOPX:56655857:SPINK2:56820579:rev:-","HOPX--SPINK2",1.0,0.0,1.0,0.0,0.873,false,"NA"]
["TCGA-LUAD","TCGA-05-4432-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",4.0,2011.0,360.0,280.0,0.406,false,"NA"]
["TCGA-LUAD","TCGA-05-5420-01A","2:AC244205.1:88861525:-:22:IGLC2:22900976:+:fusion","AC244205.1--IGLC2",1.0,12.0,1.0,0.0,0.758,false,0.00790513833992]
["TCGA-LUAD","TCGA-38-4625-11A","2:DARS-AS1:136003367:RAB3GAP1:135090998:rev:+","DARS-AS1--RAB3GAP1",2.0,279.0,7.0,0.0,0.522,false,"NA"]
["TCGA-LUAD","TCGA-38-4626-11A","1:CTSS:150730196:-:5:RPS23:82278577:-:fusion","CTSS--RPS23",6.0,0.0,1.0,0.0,0.207,false,0.031941031941]
["TCGA-LUAD","TCGA-38-4628-01A","16:RRAD:66922204:-:1:RHOC:112703457:-:fusion","RRAD--RHOC",2.0,0.0,2.0,0.0,0.582,false,0.00487804878049]
["TCGA-LUAD","TCGA-38-4629-01A","18:DSG2:31522249:+:18:AP002439.1:13362583:-:strandcross","DSG2--AP002439.1",5.0,0.0,1.0,0.0,0.818,false,0.0]
["TCGA-LUAD","TCGA-44-2655-01A","3:CTNNB1:41239354:+:11:UBXN1:62679010:-:fusion","CTNNB1--UBXN1",8.0,0.0,7.0,0.0,0.359,false,0.00402144772118]
["TCGA-LUAD","TCGA-44-2656-01A","14:AL928742.1:105648326:IGHG1:105742385:rev:-","AL928742.1--IGHG1",1.0,1.0,2.0,0.0,0.835,false,"NA"]
["TCGA-LUAD","TCGA-44-2661-01A","11:CAPRIN1:34052636:HIPK3:33286413:rev:+","CAPRIN1--HIPK3",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-LUAD","TCGA-44-2662-01B","1:TSNAX:231542611:TSNAX-DISC1:231537213:rev:+","TSNAX--TSNAX-DISC1",2.0,42.0,35.0,27.0,0.676,true,"NA"]
["TCGA-LUAD","TCGA-44-2668-01A","2:MRPS5:95148885:ZNF514:95153259:rev:-","MRPS5--ZNF514",1.0,37.0,24.0,19.0,0.92,false,"NA"]
["TCGA-LUAD","TCGA-44-2668-11A","14:DPF3:72894057:ZFYVE1:72998315:rev:-","DPF3--ZFYVE1",1.0,0.0,1.0,0.0,0.941,false,"NA"]
["TCGA-LUAD","TCGA-44-3396-11A","17:SPHK1:76381658:+:22:PACSIN2:42912157:-:fusion","SPHK1--PACSIN2",3.0,1443.0,1.0,1.0,0.247,true,0.0315789473684]
["TCGA-LUAD","TCGA-44-3918-01A","14:AL096870.2:24211415:CHMP4A:24211829:rev:-","AL096870.2--CHMP4A",2.0,18.0,15.0,9.0,0.66,true,"NA"]
["TCGA-LUAD","TCGA-44-3918-01B","6:NCOA7:125855240:TPD52L1:125220078:rev:+","NCOA7--TPD52L1",2.0,0.0,1.0,0.0,0.412,false,"NA"]
["TCGA-LUAD","TCGA-44-5644-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.548,false,"NA"]
["TCGA-LUAD","TCGA-44-6145-11A","7:ACTB:5528470:-:11:AHNAK:62534074:-:fusion","ACTB--AHNAK",7.0,0.0,175.0,0.0,0.176,false,0.0431654676259]
["TCGA-LUAD","TCGA-44-6147-01A","11:AP003108.2:61438113:SDHAF2:61437625:rev:+","AP003108.2--SDHAF2",2.0,60.0,35.0,31.0,0.874,true,"NA"]
["TCGA-LUAD","TCGA-44-6147-01A","7:ACTB:5528470:-:11:AHNAK:62534074:-:fusion","ACTB--AHNAK",2.0,0.0,175.0,0.0,0.234,false,0.0189075630252]
["TCGA-LUAD","TCGA-44-6776-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",9.0,4613.0,511.0,496.0,0.506,true,"NA"]
["TCGA-LUAD","TCGA-44-6778-11A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",4.0,2010.0,1976.0,1665.0,0.604,true,0.010101010101]
["TCGA-LUAD","TCGA-44-7667-01A","11:FXYD6:117876592:-:11:CD3G:118349027:+:strandcross","FXYD6--CD3G",1.0,0.0,1.0,0.0,0.948,false,0.0]
["TCGA-LUAD","TCGA-44-7670-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",3.0,1.0,1034.0,1.0,0.546,false,"NA"]
["TCGA-LUAD","TCGA-44-7672-01A","19:PPP1R12C:55098784:-:19:CNN2:1036130:+:strandcross","PPP1R12C--CNN2",3.0,51.0,42.0,17.0,0.774,false,0.0032]
["TCGA-LUAD","TCGA-44-8119-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.744,true,"NA"]
["TCGA-LUAD","TCGA-44-A479-01A","17:COL1A1:50189377:-:7:COL1A2:94408336:+:fusion","COL1A1--COL1A2",1.0,152.0,1.0,0.0,0.86,false,0.00213219616205]
["TCGA-LUAD","TCGA-49-4486-01A","15:CHRNB4:78656212:CTSH:78939171:rev:-","CHRNB4--CTSH",1.0,41.0,11.0,4.0,0.842,false,"NA"]
["TCGA-LUAD","TCGA-49-4490-11A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.628,true,"NA"]
["TCGA-LUAD","TCGA-49-4501-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.966,true,"NA"]
["TCGA-LUAD","TCGA-49-4505-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",3.0,397.0,152.0,123.0,0.78,true,"NA"]
["TCGA-LUAD","TCGA-49-4510-01A","2:LINC01907:230700323:NCL:231460866:rev:-","LINC01907--NCL",1.0,200.0,63.0,17.0,0.849,false,"NA"]
["TCGA-LUAD","TCGA-49-6742-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",5.0,7942.0,781.0,771.0,0.352,true,0.0114068441065]
["TCGA-LUAD","TCGA-49-6745-11A","15:PAK6:40253289:+:8:SFTPC:22161797:+:fusion","PAK6--SFTPC",3.0,0.0,1.0,0.0,0.659,false,0.0]
["TCGA-LUAD","TCGA-49-AAQV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.447,true,"NA"]
["TCGA-LUAD","TCGA-49-AARO-01A","12:R3HDM2:57268303:-:8:LINC00589:29678004:-:fusion","R3HDM2--LINC00589",1.0,0.0,1.0,0.0,0.673,false,0.0093896713615]
["TCGA-LUAD","TCGA-50-5045-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",19.0,0.0,1758.0,0.0,0.508293364258255,false,"NA"]
["TCGA-LUAD","TCGA-50-5049-01A","12:CPSF6:69262562:+:2:SH3YL1:219001:-:fusion","CPSF6--SH3YL1",2.0,3.0,2.0,2.0,0.167,true,0.0354609929078]
["TCGA-LUAD","TCGA-50-5931-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.49,false,"NA"]
["TCGA-LUAD","TCGA-50-5933-11A","8:SFTPC:22162732:+:14:CCDC85C:99516286:-:fusion","SFTPC--CCDC85C",2.0,0.0,1.0,0.0,0.255,false,0.0218068535826]
["TCGA-LUAD","TCGA-50-5946-02A","17:UNK:75784984:+:19:ZNF266:9420218:-:fusion","UNK--ZNF266",2.0,1.0,2.0,1.0,0.581,false,0.00878477306003]
["TCGA-LUAD","TCGA-50-6594-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.871,true,"NA"]
["TCGA-LUAD","TCGA-50-6597-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",2.0,5352.0,117.0,117.0,0.467,true,"NA"]
["TCGA-LUAD","TCGA-50-6673-01A","17:SYNRG:37561195:-:7:CNTNAP2:148383649:+:fusion","SYNRG--CNTNAP2",1.0,0.0,1.0,0.0,0.861,false,0.0028901734104]
["TCGA-LUAD","TCGA-55-1592-01A","8:PLPBP:37766355:+:16:CHMP1A:89647331:-:fusion","PLPBP--CHMP1A",1.0,70.0,43.0,10.0,0.899,false,0.0016155088853]
["TCGA-LUAD","TCGA-55-1595-01A","17:COL1A1:50185778:-:17:SYNRG:37609496:-:reg","COL1A1--SYNRG",3.0,0.0,2.0,0.0,0.221,false,0.0173775671406]
["TCGA-LUAD","TCGA-55-6969-01A","12:PCBP2:53479683:+:19:AC020909.3:50483351:-:fusion","PCBP2--AC020909.3",2.0,638.0,13.0,0.0,0.423,false,0.0131406044678]
["TCGA-LUAD","TCGA-55-6971-01A","12:SUOX:56006641:+:19:AC011558.1:1039064:-:fusion","SUOX--AC011558.1",6.0,2452.0,14.0,8.0,0.45,true,0.00403768506057]
["TCGA-LUAD","TCGA-55-6979-01A","17:DDX5:64503430:-:6:CUTA:33418043:-:fusion","DDX5--CUTA",2.0,0.0,4.0,0.0,0.237,false,0.0134228187919]
["TCGA-LUAD","TCGA-55-6982-01A","12:PRIM1:56751038:-:5:CTNND2:11508440:-:fusion","PRIM1--CTNND2",1.0,0.0,1.0,0.0,0.739,false,0.0012853470437]
["TCGA-LUAD","TCGA-55-6983-01A","7:BMT2:112819147:GPR85:113086414:rev:-","BMT2--GPR85",3.0,832.0,56.0,46.0,0.472,true,"NA"]
["TCGA-LUAD","TCGA-55-6984-11A","8:SFTPC:22163202:+:17:FASN:82079299:-:fusion","SFTPC--FASN",2.0,0.0,1.0,0.0,0.289,false,0.0139616055846]
["TCGA-LUAD","TCGA-55-6986-11A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",9.0,0.0,423.0,0.0,0.465,false,"NA"]
["TCGA-LUAD","TCGA-55-7283-01A","1:CLK2:155262874:GON4L:155784389:rev:-","CLK2--GON4L",2.0,2061.0,160.0,157.0,0.449,true,"NA"]
["TCGA-LUAD","TCGA-55-7284-01B","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",9.0,2011.0,360.0,280.0,0.497,false,"NA"]
["TCGA-LUAD","TCGA-55-7815-01A","1:AC243547.3:145974884:POLR3GL:145964716:rev:+","AC243547.3--POLR3GL",2.0,0.0,1.0,0.0,0.777,false,"NA"]
["TCGA-LUAD","TCGA-55-7816-01A","12:RPLP0:120197372:-:12:R3HDM2:57255113:-:reg","RPLP0--R3HDM2",2.0,0.0,3.0,0.0,0.153,false,0.0391676866585]
["TCGA-LUAD","TCGA-55-7913-01B","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.815,true,"NA"]
["TCGA-LUAD","TCGA-55-8090-01A","2:IGKC:88857161:-:3:EIF4G1:184325299:+:fusion","IGKC--EIF4G1",4.0,0.0,48.0,0.0,0.241,false,0.0093023255814]
["TCGA-LUAD","TCGA-55-8204-01A","19:MLLT1:6217954:-:16:PRSS22:2854022:-:fusion","MLLT1--PRSS22",1.0,0.0,1.0,0.0,0.85,false,9.60614793468E-4]
["TCGA-LUAD","TCGA-55-8207-01A","12:POU6F1:51207223:BIN2:51303141:rev:-","POU6F1--BIN2",2.0,45.0,5.0,3.0,0.821,true,"NA"]
["TCGA-LUAD","TCGA-55-8299-01A","1:GAS5:173865471:-:14:SERPINA1:94381141:-:fusion","GAS5--SERPINA1",2.0,0.0,2.0,0.0,0.41,false,0.00952380952381]
["TCGA-LUAD","TCGA-55-8615-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",2.0,915.0,236.0,214.0,0.421,true,"NA"]
["TCGA-LUAD","TCGA-55-8619-01A","14:WARS:100369087:-:2:IGKC:88857683:-:fusion","WARS--IGKC",8.0,0.0,1.0,0.0,0.211,false,0.0239234449761]
["TCGA-LUAD","TCGA-55-A491-01A","19:LGALS4:38801671:FBXO27:39024242:rev:-","LGALS4--FBXO27",13.0,92.0,137.0,1.0,0.62,false,"NA"]
["TCGA-LUAD","TCGA-55-A494-01A","7:ACTB:5529282:-:9:ABCA2:137009462:-:fusion","ACTB--ABCA2",2.0,0.0,8.0,0.0,0.22,false,0.017667844523]
["TCGA-LUAD","TCGA-62-8399-01A","5:NNT:43613137:+:5:CCL28:43388476:-:strandcross","NNT--CCL28",1.0,0.0,1.0,0.0,0.995,false,0.0]
["TCGA-LUAD","TCGA-62-A46O-01A","9:MEGF9:120713758:RAB14:121181573:rev:-","MEGF9--RAB14",1.0,0.0,1.0,0.0,0.884,false,"NA"]
["TCGA-LUAD","TCGA-64-1679-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",3.0,0.0,319.0,0.0,0.27,false,0.00367647058824]
["TCGA-LUAD","TCGA-64-1680-01A","6:ROS1:117352990:GOPC:117579064:rev:-","ROS1--GOPC",1.0,0.0,2.0,0.0,0.889,false,"NA"]
["TCGA-LUAD","TCGA-64-5778-01A","19:SUPT5H:39469172:+:6:HLA-DRB1:32581838:-:fusion","SUPT5H--HLA-DRB1",3.0,0.0,1.0,0.0,0.656,false,0.0142348754448]
["TCGA-LUAD","TCGA-67-6215-01A","17:MPRIP:17078076:+:17:AC005772.1:15051355:+:rev","MPRIP--AC005772.1",1.0,0.0,1.0,0.0,0.736,false,0.0014245014245]
["TCGA-LUAD","TCGA-69-7763-01A","6:CUTA:33416551:-:17:PRPF8:1654980:-:fusion","CUTA--PRPF8",4.0,0.0,1.0,0.0,0.181,false,0.0243055555556]
["TCGA-LUAD","TCGA-69-7974-01A","6:PHF3:63636150:PTP4A1:63576436:rev:+","PHF3--PTP4A1",1.0,4.0,5.0,1.0,0.862,false,"NA"]
["TCGA-LUAD","TCGA-69-7979-01A","15:MEF2A:99598511:LRRC28:99386030:rev:+","MEF2A--LRRC28",1.0,2.0,3.0,1.0,0.836,false,"NA"]
["TCGA-LUAD","TCGA-69-8255-01A","8:FGFR1:38419539:-:8:SLC20A2:42480513:-:rev","FGFR1--SLC20A2",1.0,0.0,1.0,0.0,0.624,false,0.00434153400868]
["TCGA-LUAD","TCGA-71-6725-01A","7:SUN1:853618:+:1:RSRP1:25243633:-:fusion","SUN1--RSRP1",1.0,0.0,1.0,0.0,0.956,false,0.0]
["TCGA-LUAD","TCGA-73-4668-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.89,true,"NA"]
["TCGA-LUAD","TCGA-73-4677-01A","2:IGKC:88857161:-:3:EIF4G1:184325299:+:fusion","IGKC--EIF4G1",4.0,0.0,48.0,0.0,0.375,false,0.00834724540902]
["TCGA-LUAD","TCGA-75-5125-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",2.0,0.0,192.0,0.0,0.429,false,0.0182648401826]
["TCGA-LUAD","TCGA-75-5147-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.43,false,"NA"]
["TCGA-LUAD","TCGA-75-6206-01A","18:AC093567.1:48834692:SMAD7:48921910:rev:-","AC093567.1--SMAD7",1.0,2.0,2.0,1.0,0.884,false,"NA"]
["TCGA-LUAD","TCGA-75-7025-01A","9:GSN:121332738:+:16:SLC5A2:31489489:+:fusion","GSN--SLC5A2",4.0,5758.0,1.0,1.0,0.45,true,0.00882352941176]
["TCGA-LUAD","TCGA-78-7143-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.886,true,"NA"]
["TCGA-LUAD","TCGA-78-7149-01A","12:TMBIM6:49764723:+:5:IL7R:35875512:+:fusion","TMBIM6--IL7R",2.0,528.0,2.0,0.0,0.343,false,0.0127118644068]
["TCGA-LUAD","TCGA-78-7153-01A","1:DPM3:155139891:GON4L:155784389:rev:-","DPM3--GON4L",5.0,5022.0,244.0,241.0,0.427,true,"NA"]
["TCGA-LUAD","TCGA-78-7160-01A","22:MYH9:36289085:-:16:MYH11:15721051:-:fusion","MYH9--MYH11",10.0,867.0,5.0,5.0,0.171,true,0.0311688311688]
["TCGA-LUAD","TCGA-78-7161-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",14.0,0.0,225.0,0.0,0.275,false,0.0172839506173]
["TCGA-LUAD","TCGA-78-7163-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",25.0,2010.0,1976.0,1665.0,0.862390223060866,true,0.00235849056604]
["TCGA-LUAD","TCGA-78-7535-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.657,false,"NA"]
["TCGA-LUAD","TCGA-78-7540-01A","19:CEACAM5:41729798:+:16:EARS2:23550842:-:fusion","CEACAM5--EARS2",5.0,109.0,8.0,0.0,0.203,false,0.0258620689655]
["TCGA-LUAD","TCGA-78-7633-01A","11:AP002784.1:94238277:+:1:SMYD3:245764149:-:fusion","AP002784.1--SMYD3",27.0,1558.0,165.0,160.0,0.405665766038506,true,0.010101010101]
["TCGA-LUAD","TCGA-80-5608-01A","19:ZFP30:37654712:ZNF573:37758596:rev:-","ZFP30--ZNF573",1.0,35.0,6.0,3.0,0.83,false,"NA"]
["TCGA-LUAD","TCGA-80-5611-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.749,true,"NA"]
["TCGA-LUAD","TCGA-86-6851-01A","2:IGKC:88857161:-:19:NR2C2AP:19202844:-:fusion","IGKC--NR2C2AP",4.0,0.0,7.0,0.0,0.252,false,0.0270618556701]
["TCGA-LUAD","TCGA-86-7955-01A","11:CD44:35139370:PDHX:34931404:rev:+","CD44--PDHX",1.0,4.0,15.0,0.0,0.862,false,"NA"]
["TCGA-LUAD","TCGA-86-8073-01A","19:RPL13A:49491099:+:12:MGST1:16363795:+:fusion","RPL13A--MGST1",2.0,0.0,1.0,0.0,0.328,false,0.00740192450037]
["TCGA-LUAD","TCGA-86-8281-01A","12:FBRSL1:132560230:NOC4L:132150981:rev:+","FBRSL1--NOC4L",1.0,21.0,23.0,2.0,1.0,false,"NA"]
["TCGA-LUAD","TCGA-86-8668-01A","19:NLRP11:55798229:-:17:SUPT6H:28673371:+:fusion","NLRP11--SUPT6H",3.0,264.0,5.0,1.0,0.165,false,0.0413533834586]
["TCGA-LUAD","TCGA-86-A4P8-01A","17:PER1:8140472:MYH10:8493898:rev:-","PER1--MYH10",2.0,0.0,39.0,0.0,0.401,false,"NA"]
["TCGA-LUAD","TCGA-86-A4P8-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.93,true,0.0026525198939]
["TCGA-LUAD","TCGA-91-6831-01A","9:AL135790.1:10632083:-:19:AC092069.1:12944487:-:fusion","AL135790.1--AC092069.1",2.0,7942.0,1.0,1.0,0.202,true,0.0138888888889]
["TCGA-LUAD","TCGA-91-6847-01A","5:DROSHA:31521123:-:5:AC010261.2:112209959:+:strandcross","DROSHA--AC010261.2",1.0,0.0,1.0,0.0,0.807,false,0.0]
["TCGA-LUAD","TCGA-91-A4BC-01A","17:HID1:74950743:UNC13D:75841156:rev:-","HID1--UNC13D",5.0,429.0,42.0,22.0,0.617,true,"NA"]
["TCGA-LUAD","TCGA-93-7347-01A","3:CTNNB1:41239354:+:17:TK1:78174950:-:fusion","CTNNB1--TK1",5.0,0.0,14.0,0.0,0.29,false,0.0179487179487]
["TCGA-LUAD","TCGA-93-7348-01A","2:FN1:215373322:-:16:FUS:31188325:+:fusion","FN1--FUS",1.0,1.0,1.0,0.0,0.634,false,0.00333333333333]
["TCGA-LUAD","TCGA-93-A4JP-01A","3:RNF13:149961374:+:15:AP4E1:50934536:+:fusion","RNF13--AP4E1",4.0,0.0,52.0,0.0,0.228,false,0.0132450331126]
["TCGA-LUAD","TCGA-95-7567-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.524,false,"NA"]
["TCGA-LUAD","TCGA-95-8494-01A","17:SYNGR2:78171054:+:1:MUC1:155187374:-:fusion","SYNGR2--MUC1",2.0,0.0,1.0,0.0,0.374,false,0.00806451612903]
["TCGA-LUAD","TCGA-95-A4VP-01A","19:MAP4K1:38587641:FBXO27:39024242:rev:-","MAP4K1--FBXO27",5.0,0.0,38.0,0.0,0.562,false,"NA"]
["TCGA-LUAD","TCGA-97-7552-01A","7:PRR15:29565753:+:12:A2M:9072871:-:fusion","PRR15--A2M",2.0,0.0,1.0,0.0,0.235,false,0.0153846153846]
["TCGA-LUAD","TCGA-97-7554-01A","17:AC005726.2:28604276:-:9:B4GALT1:33120606:-:fusion","AC005726.2--B4GALT1",2.0,25.0,1.0,1.0,0.38,true,0.00716332378223]
["TCGA-LUAD","TCGA-97-8171-01A","3:RPL35A:197954147:+:6:HLA-B:31357158:-:fusion","RPL35A--HLA-B",2.0,0.0,1.0,0.0,0.303,false,0.00970873786408]
["TCGA-LUAD","TCGA-97-8179-01A","16:ADGRG1:57651430:+:7:ASL:66089612:+:fusion","ADGRG1--ASL",2.0,0.0,1.0,0.0,0.474,false,0.0152671755725]
["TCGA-LUAD","TCGA-97-A4M0-01A","5:MIR1229:179798278:-:7:ACTB:5528719:-:fusion","MIR1229--ACTB",3.0,0.0,1.0,0.0,0.152,false,0.0272727272727]
["TCGA-LUAD","TCGA-97-A4M3-01A","5:PFDN1:140281449:HBEGF:140336027:rev:-","PFDN1--HBEGF",1.0,0.0,1.0,0.0,0.858,false,"NA"]
["TCGA-LUAD","TCGA-97-A4M6-01A","5:RPS23:82277693:-:2:OBSL1:219565379:-:fusion","RPS23--OBSL1",3.0,0.0,1.0,0.0,0.177,false,0.0143198090692]
["TCGA-LUAD","TCGA-99-8033-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.795,true,"NA"]
["TCGA-LUAD","TCGA-J2-8192-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.927,true,"NA"]
["TCGA-LUAD","TCGA-L9-A444-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",3.0,0.0,495.0,0.0,0.46,false,"NA"]
["TCGA-LUAD","TCGA-L9-A8F4-01A","19:ZNF544:58246794:ZNF274:58186947:rev:+","ZNF544--ZNF274",1.0,0.0,2.0,0.0,0.982,false,"NA"]
["TCGA-LUAD","TCGA-MP-A4SV-01A","22:KREMEN1:29098953:+:22:ENTHD1:39835958:-:strandcross","KREMEN1--ENTHD1",2.0,0.0,1.0,0.0,0.632,false,0.00257731958763]
["TCGA-LUAD","TCGA-MP-A4SW-01A","7:PILRB:100354012:+:2:IGKC:88857683:-:fusion","PILRB--IGKC",3.0,1.0,3.0,0.0,0.187,false,0.0285035629454]
["TCGA-LUAD","TCGA-MP-A4TD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.546,true,"NA"]
["TCGA-LUAD","TCGA-MP-A4TF-01A","4:RUFY3:70705294:+:4:AC093730.1:63474138:-:strandcross","RUFY3--AC093730.1",1.0,0.0,1.0,0.0,0.768,false,0.00178890876565]
["TCGA-LUAD","TCGA-MP-A4TJ-01A","7:AC005586.1:150372493:-:14:IGHD:105841224:-:fusion","AC005586.1--IGHD",2.0,0.0,1.0,0.0,0.329,false,0.00944881889764]
["TCGA-LUAD","TCGA-NJ-A55A-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",3.0,2324.0,521.0,517.0,0.284,true,0.0342465753425]
["TCGA-LUSC","TCGA-18-3406-01A","6:HLA-DRA:32443921:+:19:RPS11:49497917:+:fusion","HLA-DRA--RPS11",2.0,0.0,1.0,0.0,0.376,false,0.0421052631579]
["TCGA-LUSC","TCGA-18-3412-01A","2:ACSL3:222861258:SGPP2:222521767:rev:+","ACSL3--SGPP2",1.0,2.0,3.0,2.0,0.947,false,"NA"]
["TCGA-LUSC","TCGA-18-3412-01A","2:KRTCAP3:27443532:+:19:FXYD3:35122765:+:fusion","KRTCAP3--FXYD3",1.0,2.0,1.0,0.0,0.916,false,0.0]
["TCGA-LUSC","TCGA-18-4086-01A","7:BRI3:98291524:+:3:MRPL3:131490023:-:fusion","BRI3--MRPL3",3.0,0.0,1.0,0.0,0.403,false,0.0102214650767]
["TCGA-LUSC","TCGA-18-5592-01A","8:CTSB:11847093:-:11:AHNAK:62534074:-:fusion","CTSB--AHNAK",2.0,0.0,1.0,0.0,0.413,false,0.00863557858377]
["TCGA-LUSC","TCGA-21-1076-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.588,false,0.00392156862745]
["TCGA-LUSC","TCGA-21-1079-01A","1:IFI6:27668226:-:15:B2M:44715423:+:fusion","IFI6--B2M",1.0,0.0,2.0,0.0,0.78,false,0.0056657223796]
["TCGA-LUSC","TCGA-21-5783-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.538,false,"NA"]
["TCGA-LUSC","TCGA-21-5786-01A","21:COL6A1:46003149:+:14:IGHG1:105743071:-:fusion","COL6A1--IGHG1",2.0,0.0,1.0,0.0,0.175,false,0.0374479889043]
["TCGA-LUSC","TCGA-21-A5DI-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.574,false,"NA"]
["TCGA-LUSC","TCGA-22-1005-01A","2:IGKC:88857161:-:6:TRIM26:30198524:-:fusion","IGKC--TRIM26",35.0,0.0,8.0,0.0,0.314172798827579,false,0.0404217926186]
["TCGA-LUSC","TCGA-22-1012-01A","13:TPT1:45340712:-:X:RPS4X:72273972:-:fusion","TPT1--RPS4X",1.0,0.0,1.0,0.0,0.798,false,0.00459770114943]
["TCGA-LUSC","TCGA-22-4593-11A","3:CDHR4:49798327:MON1A:49913359:rev:-","CDHR4--MON1A",1.0,234.0,49.0,17.0,0.977,false,"NA"]
["TCGA-LUSC","TCGA-22-4604-01A","2:COL3A1:189006259:+:17:COL1A1:50197063:-:fusion","COL3A1--COL1A1",1.0,0.0,1.0,0.0,0.736,false,0.00817438692098]
["TCGA-LUSC","TCGA-22-4609-01A","8:TRPS1:115668545:-:8:RAD21:116866761:-:rev","TRPS1--RAD21",3.0,4.0,5.0,0.0,0.806,false,0.0]
["TCGA-LUSC","TCGA-22-4613-01A","19:ARMC6:19040792:AC002985.2:18946326:rev:+","ARMC6--AC002985.2",2.0,8.0,5.0,0.0,0.667,false,"NA"]
["TCGA-LUSC","TCGA-22-5474-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",9.0,0.0,1126.0,0.0,0.638,false,"NA"]
["TCGA-LUSC","TCGA-22-5478-11A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.532,false,"NA"]
["TCGA-LUSC","TCGA-22-5481-01A","10:CHCHD1:73782441:+:5:HRH2:175707779:+:fusion","CHCHD1--HRH2",2.0,0.0,1.0,0.0,0.296,false,0.0155902004454]
["TCGA-LUSC","TCGA-22-5482-11A","1:AP4B1:113904605:CSDE1:114718745:rev:-","AP4B1--CSDE1",2.0,11.0,17.0,4.0,0.988,true,"NA"]
["TCGA-LUSC","TCGA-22-5489-01A","14:IGHA1:105707785:-:6:EEF1A1:73519228:-:fusion","IGHA1--EEF1A1",1.0,0.0,1.0,0.0,0.845,false,0.00377833753149]
["TCGA-LUSC","TCGA-22-5491-01A","11:AC107884.1:7465753:STK33:8464822:rev:-","AC107884.1--STK33",1.0,39.0,25.0,2.0,0.871,false,"NA"]
["TCGA-LUSC","TCGA-22-5491-11A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.556,false,"NA"]
["TCGA-LUSC","TCGA-33-4533-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.766,true,"NA"]
["TCGA-LUSC","TCGA-33-4582-01A","19:ZNF30:34929956:UBA2:34450265:rev:+","ZNF30--UBA2",1.0,0.0,1.0,0.0,0.904,false,"NA"]
["TCGA-LUSC","TCGA-33-6737-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",26.0,210.0,4870.0,17.0,0.793581198020125,false,"NA"]
["TCGA-LUSC","TCGA-33-6738-01A","2:IGKC:88857161:-:1:S100A4:153545097:-:fusion","IGKC--S100A4",2.0,0.0,5.0,0.0,0.228,false,0.0181347150259]
["TCGA-LUSC","TCGA-33-AASJ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.948,true,"NA"]
["TCGA-LUSC","TCGA-34-2596-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.8,true,"NA"]
["TCGA-LUSC","TCGA-34-5234-01A","16:KCTD5:2682800:AC141586.1:2610462:rev:+","KCTD5--AC141586.1",3.0,126.0,62.0,54.0,0.78,true,"NA"]
["TCGA-LUSC","TCGA-34-5239-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",2.0,397.0,152.0,123.0,0.912,true,"NA"]
["TCGA-LUSC","TCGA-34-5928-01A","2:FN1:215379130:-:15:TPM1:63060869:+:fusion","FN1--TPM1",2.0,0.0,3.0,0.0,0.237,false,0.0174731182796]
["TCGA-LUSC","TCGA-34-7107-01A","3:TP63:189789842:+:3:CLDN1:190313036:-:strandcross","TP63--CLDN1",1.0,6.0,3.0,0.0,0.833,false,0.00835073068894]
["TCGA-LUSC","TCGA-34-8454-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.861,true,"NA"]
["TCGA-LUSC","TCGA-37-4129-01A","15:STARD9:42630146:+:22:MB:35617265:-:fusion","STARD9--MB",26.0,2569.0,85.0,85.0,0.514288249202648,true,0.0174216027875]
["TCGA-LUSC","TCGA-37-4135-01A","7:SLC25A13:96234802:SEM1:96694891:rev:-","SLC25A13--SEM1",2.0,2.0,7.0,1.0,0.97,true,"NA"]
["TCGA-LUSC","TCGA-39-5016-01A","2:DARS-AS1:136003367:R3HDM1:135675332:rev:+","DARS-AS1--R3HDM1",1.0,442.0,88.0,47.0,0.805,false,"NA"]
["TCGA-LUSC","TCGA-39-5022-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",4.0,0.0,182.0,0.0,0.509,false,"NA"]
["TCGA-LUSC","TCGA-39-5024-01A","12:AC010203.2:100143343:+:7:EPHA1-AS1:143415068:+:fusion","AC010203.2--EPHA1-AS1",17.0,2671.0,37.0,30.0,0.48285795777581,true,0.0134730538922]
["TCGA-LUSC","TCGA-39-5027-01A","8:YWHAZ:100953269:ZNF706:101201743:rev:-","YWHAZ--ZNF706",2.0,1.0,5.0,0.0,0.642,false,"NA"]
["TCGA-LUSC","TCGA-39-5034-01A","17:DDX5:64503430:-:22:IGLJ2:22899481:+:fusion","DDX5--IGLJ2",2.0,0.0,10.0,0.0,0.176,false,0.0243309002433]
["TCGA-LUSC","TCGA-39-5036-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",3.0,1.0,1034.0,1.0,0.471,false,"NA"]
["TCGA-LUSC","TCGA-43-2576-01A","3:MB21D2:192917630:-:7:MAD1L1:1816228:-:fusion","MB21D2--MAD1L1",1.0,0.0,1.0,0.0,0.985,false,0.0]
["TCGA-LUSC","TCGA-43-3394-11A","17:YWHAE:1400047:CRK:1437155:rev:-","YWHAE--CRK",1.0,26.0,63.0,13.0,0.967,true,"NA"]
["TCGA-LUSC","TCGA-43-5670-01A","19:SPINT2:38292451:+:11:AC124057.1:2404515:+:fusion","SPINT2--AC124057.1",6.0,0.0,2.0,0.0,0.163,false,0.0296296296296]
["TCGA-LUSC","TCGA-43-6143-01A","22:PIM3:49962865:+:19:KHSRP:6415721:-:fusion","PIM3--KHSRP",2.0,0.0,1.0,0.0,0.368,false,0.0102790014684]
["TCGA-LUSC","TCGA-43-6647-01A","11:MMP13:102950110:-:11:TNKS1BP1:57302825:-:reg","MMP13--TNKS1BP1",1.0,0.0,1.0,0.0,0.949,false,0.00149925037481]
["TCGA-LUSC","TCGA-43-6771-11A","19:LILRA6:54240831:LILRB2:54278562:rev:-","LILRA6--LILRB2",11.0,125.0,46.0,44.0,0.756,true,"NA"]
["TCGA-LUSC","TCGA-43-6773-11A","5:GFM2:74765035:POC5:75685484:rev:-","GFM2--POC5",1.0,125.0,64.0,16.0,0.944,false,"NA"]
["TCGA-LUSC","TCGA-43-7658-11A","1:UQCRH:46303820:+:8:SFTPC:22161798:+:fusion","UQCRH--SFTPC",1.0,2.0,1.0,0.0,0.663,false,0.0147928994083]
["TCGA-LUSC","TCGA-43-8115-01A","19:RPL36:5691633:+:20:LAMA5:62313460:-:fusion","RPL36--LAMA5",3.0,52.0,5.0,0.0,0.231,false,0.0117924528302]
["TCGA-LUSC","TCGA-46-3767-01A","3:NCK1:136928227:PCCB:136316941:rev:+","NCK1--PCCB",2.0,0.0,1.0,0.0,0.54,false,"NA"]
["TCGA-LUSC","TCGA-46-3768-01A","19:AC074212.1:45765964:+:7:HSPB1:76302544:+:fusion","AC074212.1--HSPB1",2.0,0.0,7.0,0.0,0.317,false,0.0198511166253]
["TCGA-LUSC","TCGA-46-6025-01A","5:SQSTM1:179837255:+:3:EIF4G1:184325299:+:fusion","SQSTM1--EIF4G1",2.0,0.0,1.0,0.0,0.197,false,0.0178041543027]
["TCGA-LUSC","TCGA-51-4079-11A","X:RPS4X:72275544:-:2:RNPEPL1:240577599:+:fusion","RPS4X--RNPEPL1",3.0,0.0,2.0,0.0,0.181,false,0.0271565495208]
["TCGA-LUSC","TCGA-51-4081-01A","17:COL1A1:50186317:-:17:WNK4:42780678:+:strandcross","COL1A1--WNK4",4.0,0.0,15.0,0.0,0.37,false,0.0173611111111]
["TCGA-LUSC","TCGA-51-6867-01A","X:DLG3:70455263:KIF4A:70417888:rev:+","DLG3--KIF4A",1.0,0.0,1.0,0.0,0.826,false,"NA"]
["TCGA-LUSC","TCGA-52-7809-01A","12:HSP90B1:103946941:+:7:HNRNPA2B1:26193694:-:fusion","HSP90B1--HNRNPA2B1",2.0,0.0,1.0,0.0,0.288,false,0.0383275261324]
["TCGA-LUSC","TCGA-56-6545-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.536,false,"NA"]
["TCGA-LUSC","TCGA-56-6546-01A","14:IGHA1:105707118:-:22:SEC14L4:30492557:-:fusion","IGHA1--SEC14L4",2.0,0.0,2.0,0.0,0.344,false,0.0127591706539]
["TCGA-LUSC","TCGA-56-7579-11A","5:ITGA1:52865082:+:5:CD74:150412732:-:strandcross","ITGA1--CD74",4.0,0.0,1.0,0.0,0.186,false,0.0254545454545]
["TCGA-LUSC","TCGA-56-7582-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.891,true,"NA"]
["TCGA-LUSC","TCGA-56-7823-01B","14:RCOR1:102593325:+:14:AL590079.1:104243097:+:reg","RCOR1--AL590079.1",1.0,0.0,1.0,0.0,0.979,false,0.0]
["TCGA-LUSC","TCGA-56-8082-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.634,false,"NA"]
["TCGA-LUSC","TCGA-56-8305-01A","16:MKL2:14079354:+:16:PARN:14447081:-:strandcross","MKL2--PARN",1.0,0.0,1.0,0.0,0.628,false,0.0053050397878]
["TCGA-LUSC","TCGA-56-8309-11A","17:TNFSF13:7560838:+:8:SFTPC:22161807:+:fusion","TNFSF13--SFTPC",2.0,0.0,1.0,0.0,0.203,false,0.0183486238532]
["TCGA-LUSC","TCGA-56-8624-01A","7:PDAP1:99397862:-:7:CDK14:91207165:+:strandcross","PDAP1--CDK14",2.0,0.0,1.0,0.0,0.166,false,0.04]
["TCGA-LUSC","TCGA-56-A4BY-01A","19:AC008894.1:16104101:-:6:XPO5:43528205:-:fusion","AC008894.1--XPO5",1.0,230.0,1.0,0.0,0.775,false,0.00433839479393]
["TCGA-LUSC","TCGA-58-8387-01A","17:TRAPPC1:7930349:MYH10:8493898:rev:-","TRAPPC1--MYH10",3.0,0.0,110.0,0.0,0.406,false,"NA"]
["TCGA-LUSC","TCGA-58-8392-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.433,false,"NA"]
["TCGA-LUSC","TCGA-58-A46K-01A","17:ERBB2:39713269:+:8:PVT1:128009590:+:fusion","ERBB2--PVT1",3.0,1149.0,78.0,36.0,0.154,false,0.0338164251208]
["TCGA-LUSC","TCGA-60-2696-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.548,false,"NA"]
["TCGA-LUSC","TCGA-60-2704-01A","10:ANKRD26:27080032:YME1L1:27123699:rev:-","ANKRD26--YME1L1",1.0,34.0,8.0,2.0,0.828,false,"NA"]
["TCGA-LUSC","TCGA-60-2707-01A","9:AQP3:33441183:-:17:CDK5RAP3:47979217:+:fusion","AQP3--CDK5RAP3",2.0,2.0,4.0,0.0,0.173,false,0.0269607843137]
["TCGA-LUSC","TCGA-60-2711-01A","1:PSMA5:109409928:-:10:MARCH8:45553204:-:fusion","PSMA5--MARCH8",1.0,2458.0,7.0,3.0,0.584,false,0.0103092783505]
["TCGA-LUSC","TCGA-60-2715-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",4.0,2010.0,1976.0,1665.0,0.173,true,0.0143884892086]
["TCGA-LUSC","TCGA-60-2719-01A","12:SRSF9:120469422:COQ5:120522363:rev:-","SRSF9--COQ5",1.0,0.0,1.0,0.0,0.909,false,"NA"]
["TCGA-LUSC","TCGA-60-2721-01A","5:CTNNA1:138932712:+:6:HLA-DRA:32443756:+:fusion","CTNNA1--HLA-DRA",2.0,0.0,3.0,0.0,0.221,false,0.0304259634888]
["TCGA-LUSC","TCGA-63-5128-01A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",3.0,2324.0,521.0,517.0,0.756,true,0.0]
["TCGA-LUSC","TCGA-63-7020-01A","11:GANAB:62630379:-:11:MUS81:65865220:+:strandcross","GANAB--MUS81",2.0,0.0,1.0,0.0,0.208,false,0.0237691001698]
["TCGA-LUSC","TCGA-63-7021-01A","2:CTDSP1:218402405:+:9:C9orf3:95086682:+:fusion","CTDSP1--C9orf3",1.0,72.0,73.0,23.0,0.637,false,0.00505689001264]
["TCGA-LUSC","TCGA-63-7022-01A","22:AC253536.3:24101737:SMARCB1:23834141:rev:+","AC253536.3--SMARCB1",3.0,0.0,2.0,0.0,0.402,false,"NA"]
["TCGA-LUSC","TCGA-63-7023-01A","7:GCC1:127591813:-:8:RPS20:56074472:-:fusion","GCC1--RPS20",2.0,0.0,1.0,0.0,0.17,false,0.0211180124224]
["TCGA-LUSC","TCGA-63-A5MG-01A","12:RAN:130876281:+:2:IGKC:88857683:-:fusion","RAN--IGKC",8.0,0.0,1.0,0.0,0.155,false,0.044262295082]
["TCGA-LUSC","TCGA-63-A5MR-01A","11:CARD16:105045291:CARD17:105099421:rev:-","CARD16--CARD17",15.0,669.0,283.0,225.0,0.753,true,"NA"]
["TCGA-LUSC","TCGA-63-A5MW-01A","12:TMTC2:83134302:+:6:SNX14:85543760:-:fusion","TMTC2--SNX14",6.0,3.0,174.0,0.0,0.261,false,0.0337078651685]
["TCGA-LUSC","TCGA-66-2744-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,495.0,0.0,0.587,false,"NA"]
["TCGA-LUSC","TCGA-66-2754-01A","21:PRMT2:46636990:+:14:HNRNPC:21213117:-:fusion","PRMT2--HNRNPC",1.0,0.0,1.0,0.0,0.812,false,0.00263852242744]
["TCGA-LUSC","TCGA-66-2759-01A","19:TBC1D17:49878572:NUCB1:48921827:rev:+","TBC1D17--NUCB1",1.0,0.0,1.0,0.0,0.854,false,"NA"]
["TCGA-LUSC","TCGA-66-2763-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.906,true,"NA"]
["TCGA-LUSC","TCGA-66-2767-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.899,true,"NA"]
["TCGA-LUSC","TCGA-66-2773-01A","11:ANO9:441921:RNH1:502181:rev:-","ANO9--RNH1",1.0,0.0,1.0,0.0,0.827,false,"NA"]
["TCGA-LUSC","TCGA-66-2780-01A","12:AC025263.2:69801721:RAB3IP:69800209:rev:+","AC025263.2--RAB3IP",1.0,87.0,56.0,45.0,0.985,false,"NA"]
["TCGA-LUSC","TCGA-66-2788-01A","7:ADAP1:919968:C7orf50:1010143:rev:-","ADAP1--C7orf50",1.0,6.0,16.0,3.0,0.899,false,"NA"]
["TCGA-LUSC","TCGA-66-2790-01A","12:NAP1L1:76067371:OSBPL8:76487618:rev:-","NAP1L1--OSBPL8",1.0,0.0,1.0,0.0,0.836,false,"NA"]
["TCGA-LUSC","TCGA-68-7755-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.418,false,"NA"]
["TCGA-LUSC","TCGA-68-7756-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.686,false,"NA"]
["TCGA-LUSC","TCGA-68-A59J-01A","1:KIF26B:245156683:+:1:SMYD3:245929937:-:strandcross","KIF26B--SMYD3",1.0,15.0,9.0,4.0,0.968,false,0.00153139356815]
["TCGA-LUSC","TCGA-77-6842-01A","16:ECI1:2246859:ABCA3:2329854:rev:-","ECI1--ABCA3",1.0,0.0,1.0,0.0,0.884,false,"NA"]
["TCGA-LUSC","TCGA-77-6843-01A","16:KARS:75631416:-:19:C19orf60:18588995:+:fusion","KARS--C19orf60",2.0,0.0,1.0,0.0,0.187,false,0.0407876230661]
["TCGA-LUSC","TCGA-77-6845-01A","11:GAB2:78417646:NARS2:78443758:rev:-","GAB2--NARS2",1.0,0.0,3.0,0.0,0.966,false,"NA"]
["TCGA-LUSC","TCGA-77-6845-01A","7:BRAF:140777991:-:7:SUGCT:40860316:+:strandcross","BRAF--SUGCT",4.0,0.0,70.0,0.0,0.322,false,0.0]
["TCGA-LUSC","TCGA-77-7142-01A","11:HIKESHI:86306482:EED:86264172:rev:+","HIKESHI--EED",1.0,0.0,1.0,0.0,0.964,false,"NA"]
["TCGA-LUSC","TCGA-77-7337-01A","12:PCBP2:53479683:+:14:AL157871.4:100333790:+:fusion","PCBP2--AL157871.4",2.0,450.0,1.0,0.0,0.477,false,0.00553505535055]
["TCGA-LUSC","TCGA-77-8007-11A","11:SBF2:10193902:-:7:SND1:127807484:+:fusion","SBF2--SND1",1.0,0.0,1.0,0.0,0.849,false,0.00340136054422]
["TCGA-LUSC","TCGA-77-8008-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.988,true,"NA"]
["TCGA-LUSC","TCGA-77-8136-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.685,false,0.00269541778976]
["TCGA-LUSC","TCGA-77-8140-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.962,true,"NA"]
["TCGA-LUSC","TCGA-77-A5FZ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.916,true,"NA"]
["TCGA-LUSC","TCGA-77-A5G6-01A","19:PPP5C:46376574:HIF3A:46339525:rev:+","PPP5C--HIF3A",1.0,0.0,1.0,0.0,0.975,false,"NA"]
["TCGA-LUSC","TCGA-85-6175-01A","17:COL1A1:50186317:-:1:TMEM59:54041805:-:fusion","COL1A1--TMEM59",3.0,0.0,1.0,0.0,0.532,false,0.00547945205479]
["TCGA-LUSC","TCGA-85-6798-01A","16:C16orf52:22008407:METTL9:21617865:rev:+","C16orf52--METTL9",2.0,0.0,1.0,0.0,0.599,false,"NA"]
["TCGA-LUSC","TCGA-85-7699-01A","7:SDHAF3:97117897:+:7:SEM1:96694891:-:strandcross","SDHAF3--SEM1",1.0,10.0,1.0,0.0,0.819,false,0.00219298245614]
["TCGA-LUSC","TCGA-85-7844-01A","17:AC005899.1:32431049:LRRC37B:32020697:rev:+","AC005899.1--LRRC37B",1.0,18.0,4.0,0.0,0.832,false,"NA"]
["TCGA-LUSC","TCGA-85-8048-01A","1:ZBTB8OS:32633262:RNF19B:32942459:rev:-","ZBTB8OS--RNF19B",1.0,1210.0,48.0,33.0,0.81,false,"NA"]
["TCGA-LUSC","TCGA-85-8277-01A","7:CALU:128769196:FAM71F1:128713923:rev:+","CALU--FAM71F1",1.0,0.0,1.0,0.0,0.836,false,"NA"]
["TCGA-LUSC","TCGA-85-8350-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.658,false,"NA"]
["TCGA-LUSC","TCGA-85-8481-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.762,true,"NA"]
["TCGA-LUSC","TCGA-85-8582-01A","4:MRFAP1:6641258:+:2:ASXL2:25743056:-:fusion","MRFAP1--ASXL2",9.0,0.0,12.0,0.0,0.435,false,0.010067114094]
["TCGA-LUSC","TCGA-85-A4PA-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",5.0,0.0,423.0,0.0,0.406,false,"NA"]
["TCGA-LUSC","TCGA-85-A4QQ-01A","8:CTSB:11844355:-:7:FSCN1:5603496:+:fusion","CTSB--FSCN1",4.0,0.0,8.0,0.0,0.168,false,0.0494880546075]
["TCGA-LUSC","TCGA-85-A50Z-01A","3:YEATS2:183715262:ATP11B:182913861:rev:+","YEATS2--ATP11B",1.0,0.0,1.0,0.0,0.894,false,"NA"]
["TCGA-LUSC","TCGA-90-6837-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.812,false,"NA"]
["TCGA-LUSC","TCGA-90-7767-11A","2:LAPTM4A:20051410:PUM2:20327378:rev:-","LAPTM4A--PUM2",1.0,3.0,4.0,2.0,0.889,false,"NA"]
["TCGA-LUSC","TCGA-90-7964-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.452,false,"NA"]
["TCGA-LUSC","TCGA-90-A59Q-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.43,true,"NA"]
["TCGA-LUSC","TCGA-92-8064-01A","15:RAB27A:55314039:NEDD4:55905281:rev:-","RAB27A--NEDD4",1.0,1.0,3.0,0.0,0.894,false,"NA"]
["TCGA-LUSC","TCGA-94-7943-01A","2:EHBP1:62864971:COMMD1:62135831:rev:+","EHBP1--COMMD1",2.0,0.0,1.0,0.0,0.729,false,"NA"]
["TCGA-LUSC","TCGA-96-7544-01A","17:COL1A1:50186317:-:12:SLC25A3:98593979:+:fusion","COL1A1--SLC25A3",2.0,0.0,2.0,0.0,0.48,false,0.0118845500849]
["TCGA-LUSC","TCGA-96-A4JK-01A","17:AC025048.4:60079472:+:12:OAS3:112944476:+:fusion","AC025048.4--OAS3",1.0,0.0,1.0,0.0,0.795,false,0.00796812749004]
["TCGA-LUSC","TCGA-98-8022-01A","12:ETV6:11752579:+:12:PRB4:11309405:-:strandcross","ETV6--PRB4",1.0,0.0,1.0,0.0,0.846,false,0.0]
["TCGA-LUSC","TCGA-98-A538-01A","2:IGKV6D-41:90069736:+:2:IGKC:88857683:-:strandcross","IGKV6D-41--IGKC",7.0,42.0,18.0,14.0,0.155,true,0.0581395348837]
["TCGA-LUSC","TCGA-98-A53J-01A","1:CLSTN1:9729026:-:17:PRPF8:1654980:-:fusion","CLSTN1--PRPF8",7.0,2949.0,49.0,14.0,0.23,false,0.0214285714286]
["TCGA-LUSC","TCGA-L3-A524-01A","16:GLG1:74606657:CFDP1:75294042:rev:-","GLG1--CFDP1",1.0,1.0,1.0,0.0,0.851,false,"NA"]
["TCGA-LUSC","TCGA-LA-A7SW-01A","15:PPIB:64156725:-:11:GSTP1:67586104:+:fusion","PPIB--GSTP1",2.0,0.0,8.0,0.0,0.318,false,0.0223880597015]
["TCGA-LUSC","TCGA-NC-A5HI-01A","13:RB1:48307406:ITM2B:48253808:rev:+","RB1--ITM2B",1.0,47.0,97.0,28.0,0.933,false,"NA"]
["TCGA-LUSC","TCGA-NC-A5HN-01A","16:RPL13:89563066:+:8:AC105202.1:143018437:-:fusion","RPL13--AC105202.1",2.0,0.0,1.0,0.0,0.281,false,0.0203703703704]
["TCGA-LUSC","TCGA-NC-A5HT-01A","4:BMPR1B:94996134:PDLIM5:94523724:rev:+","BMPR1B--PDLIM5",1.0,6.0,4.0,0.0,0.901,false,"NA"]
["TCGA-LUSC","TCGA-NK-A5CX-01A","19:ZNF574:42081549:AC243960.1:41554951:rev:+","ZNF574--AC243960.1",2.0,0.0,90.0,0.0,0.43,false,"NA"]
["TCGA-LUSC","TCGA-O2-A5IB-01A","7:AC092167.1:110432811:IMMP2L:110963565:rev:-","AC092167.1--IMMP2L",1.0,4.0,3.0,0.0,0.985,false,"NA"]
["TCGA-MESO","TCGA-3H-AB3L-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",5.0,0.0,192.0,0.0,0.356,false,0.0170068027211]
["TCGA-MESO","TCGA-3U-A98F-01A","2:NCL:231461540:-:13:TPT1:45340785:-:fusion","NCL--TPT1",3.0,0.0,17.0,0.0,0.204,false,0.0368421052632]
["TCGA-MESO","TCGA-LK-A4NY-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,1126.0,0.0,0.621,false,"NA"]
["TCGA-MESO","TCGA-MQ-A4KX-01A","6:FLOT1:30730428:-:7:PCOLCE:100603430:+:fusion","FLOT1--PCOLCE",2.0,0.0,3.0,0.0,0.47,false,0.00602409638554]
["TCGA-MESO","TCGA-MQ-A4LI-01A","9:SCAI:125142633:PPP6C:125160906:rev:-","SCAI--PPP6C",1.0,0.0,3.0,0.0,0.943,false,"NA"]
["TCGA-MESO","TCGA-MQ-A6BL-01A","X:FLNA:154358984:-:14:IGHG1:105741795:-:fusion","FLNA--IGHG1",3.0,0.0,1.0,0.0,0.364,false,0.0107296137339]
["TCGA-MESO","TCGA-SC-A6LN-01A","9:SPTAN1:128599495:+:17:RPL38:74203693:+:fusion","SPTAN1--RPL38",3.0,2614.0,20.0,16.0,0.268,false,0.0190476190476]
["TCGA-MESO","TCGA-SH-A7BD-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",9.0,5703.0,236.0,234.0,0.78,true,"NA"]
["TCGA-MESO","TCGA-TS-A7P1-01A","16:KCTD5:2682800:AC141586.1:2610462:rev:+","KCTD5--AC141586.1",2.0,126.0,62.0,54.0,0.631,false,"NA"]
["TCGA-MESO","TCGA-TS-A7P3-01A","17:COL1A1:50191788:-:12:COL2A1:47985965:-:fusion","COL1A1--COL2A1",1.0,0.0,3.0,0.0,0.756,false,0.0137614678899]
["TCGA-MESO","TCGA-UD-AABZ-01A","17:JPT1:75135984:UNC13D:75841156:rev:-","JPT1--UNC13D",4.0,2439.0,257.0,256.0,0.523,true,"NA"]
["TCGA-MESO","TCGA-UD-AAC4-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",3.0,0.0,98.0,0.0,0.192,false,0.0181818181818]
["TCGA-MESO","TCGA-YS-A95B-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",2.0,210.0,4870.0,17.0,0.418,false,"NA"]
["TCGA-MESO","TCGA-ZN-A9VQ-01A","7:COL1A2:94412682:+:17:COL1A1:50196528:-:fusion","COL1A2--COL1A1",1.0,9.0,1.0,0.0,0.943,false,0.0114503816794]
["TCGA-OV","TCGA-04-1517-01A","17:RUNDC3A:44317123:+:X:CHST7:46597760:+:fusion","RUNDC3A--CHST7",2.0,4989.0,2.0,2.0,0.463,true,0.0014684287812]
["TCGA-OV","TCGA-09-1659-01B","X:SLC25A5:119468626:+:X:SLC25A6:1390290:-:strandcross","SLC25A5--SLC25A6",1.0,9326.0,1.0,1.0,0.925,true,4.38788942519E-4]
["TCGA-OV","TCGA-10-0926-01A","X:TRO:54926489:MAGED2:54813118:rev:+","TRO--MAGED2",3.0,6617.0,5.0,5.0,0.599,true,"NA"]
["TCGA-OV","TCGA-10-0934-01A","1:RPL12P14:15793285:+:9:RPL12:127448423:-:fusion","RPL12P14--RPL12",3.0,46.0,1.0,1.0,0.516,true,0.00927908636688]
["TCGA-OV","TCGA-13-0799-01A","19:PRDX2:12799859:-:19:UBA52:18573293:+:strandcross","PRDX2--UBA52",1.0,0.0,1.0,0.0,0.814,false,0.0]
["TCGA-OV","TCGA-13-0901-01B","10:KIF1BP:68995278:STOX1:68892589:rev:+","KIF1BP--STOX1",2.0,11.0,3.0,2.0,0.721,true,"NA"]
["TCGA-OV","TCGA-13-1408-01A","8:RPS20:56074381:-:X:RPS4X:72276234:-:fusion","RPS20--RPS4X",2.0,28.0,2.0,2.0,0.968,true,0.0]
["TCGA-OV","TCGA-13-1489-01A","10:CFAP46:132940996:ADAM8:133263233:rev:-","CFAP46--ADAM8",1.0,0.0,1.0,0.0,0.89,false,"NA"]
["TCGA-OV","TCGA-13-1497-01A","1:UCK2:165827932:PBX1:164846584:rev:+","UCK2--PBX1",1.0,0.0,2.0,0.0,0.905,false,"NA"]
["TCGA-OV","TCGA-20-1683-01A","8:PVT1:128010444:MYC:127738292:rev:+","PVT1--MYC",1.0,0.0,1.0,0.0,0.944,false,"NA"]
["TCGA-OV","TCGA-23-1022-01A","3:NDUFB5:179604939:ACTL6A:179573369:rev:+","NDUFB5--ACTL6A",1.0,0.0,3.0,0.0,0.923,false,"NA"]
["TCGA-OV","TCGA-23-1120-01A","1:GBP7:89152268:GBP4:89191506:rev:-","GBP7--GBP4",1.0,8.0,1.0,0.0,0.94,false,"NA"]
["TCGA-OV","TCGA-23-2078-01A","2:LYPD6:149330722:LYPD6B:149160764:rev:+","LYPD6--LYPD6B",1.0,1.0,2.0,1.0,0.804,false,"NA"]
["TCGA-OV","TCGA-24-1434-01A","1:RPL22:6192930:-:3:MECOM:169381524:-:fusion","RPL22--MECOM",3.0,309.0,76.0,73.0,0.751,true,0.00485436893204]
["TCGA-OV","TCGA-24-1564-01A","19:MISP:751171:PALM:746285:rev:+","MISP--PALM",1.0,0.0,3.0,0.0,0.863,false,"NA"]
["TCGA-OV","TCGA-24-1850-01A","1:RPL22:6192930:-:3:MECOM:169381524:-:fusion","RPL22--MECOM",4.0,309.0,76.0,73.0,0.167,true,0.0325203252033]
["TCGA-OV","TCGA-25-2399-01A","19:NUP62:49929326:-:19:ATF5:49932422:+:strandcross","NUP62--ATF5",3.0,56.0,8.0,8.0,0.998,true,0.0]
["TCGA-OV","TCGA-29-2425-01A","2:ITGA6:172427970:DYNC1I2:171715328:rev:+","ITGA6--DYNC1I2",1.0,0.0,1.0,0.0,0.978,false,"NA"]
["TCGA-OV","TCGA-31-1956-01A","19:LILRA6:54240831:LILRB2:54278562:rev:-","LILRA6--LILRB2",10.0,125.0,46.0,44.0,0.573,true,"NA"]
["TCGA-OV","TCGA-36-1570-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",22.0,2010.0,1976.0,1665.0,0.758918291300012,true,0.0]
["TCGA-OV","TCGA-57-1585-01A","22:SPECC1L:24302384:+:15:HACD3:65535721:+:fusion","SPECC1L--HACD3",4.0,1806.0,40.0,36.0,0.157,true,0.046468401487]
["TCGA-OV","TCGA-59-2351-01A","7:PMPCB:103312131:+:7:DNAJC2:103313101:-:strandcross","PMPCB--DNAJC2",4.0,17.0,3.0,3.0,0.806,true,0.00692041522491]
["TCGA-OV","TCGA-61-1728-01A","X:TRO:54926489:MAGED2:54813118:rev:+","TRO--MAGED2",2.0,6617.0,5.0,5.0,0.65,true,"NA"]
["TCGA-OV","TCGA-61-1918-01A","2:ZRANB3:135345550:DARS:135933990:rev:-","ZRANB3--DARS",1.0,0.0,1.0,0.0,0.992,false,"NA"]
["TCGA-OV","TCGA-61-2113-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.483,true,"NA"]
["TCGA-PAAD","TCGA-2J-AAB6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.745,true,"NA"]
["TCGA-PAAD","TCGA-2J-AABV-01A","7:PRSS1:142752027:+:7:CPA2:130279463:+:rev","PRSS1--CPA2",1.0,0.0,1.0,0.0,0.921,false,0.0]
["TCGA-PAAD","TCGA-2L-AAQI-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",25.0,1.0,1034.0,1.0,0.778440956400608,false,"NA"]
["TCGA-PAAD","TCGA-3A-A9I5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.84,false,"NA"]
["TCGA-PAAD","TCGA-3A-A9IO-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",4.0,7942.0,781.0,771.0,0.45,true,0.0138504155125]
["TCGA-PAAD","TCGA-3E-AAAZ-01A","13:AL359538.1:24567396:SPATA13:24284135:rev:+","AL359538.1--SPATA13",2.0,1224.0,44.0,35.0,0.587,true,"NA"]
["TCGA-PAAD","TCGA-F2-A7TX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.881,true,"NA"]
["TCGA-PAAD","TCGA-FB-A78T-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.994,true,"NA"]
["TCGA-PAAD","TCGA-FB-AAPY-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",4.0,726.0,603.0,54.0,0.543,false,"NA"]
["TCGA-PAAD","TCGA-FB-AAQ1-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.202,false,0.0241935483871]
["TCGA-PAAD","TCGA-HV-A5A3-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.42,true,"NA"]
["TCGA-PAAD","TCGA-HV-A7OP-01A","19:RANBP3:5917322:DENND1C:6477588:rev:-","RANBP3--DENND1C",4.0,0.0,69.0,0.0,0.438,false,"NA"]
["TCGA-PAAD","TCGA-HZ-7920-01A","4:MRFAP1:6641258:+:1:HNRNPU:244845344:-:fusion","MRFAP1--HNRNPU",12.0,0.0,8.0,0.0,0.789,false,0.00813008130081]
["TCGA-PAAD","TCGA-HZ-7925-01A","15:B2M:44718067:+:19:POP4:29613871:+:fusion","B2M--POP4",2.0,0.0,5.0,0.0,0.511,false,0.0154185022026]
["TCGA-PAAD","TCGA-HZ-7926-01A","1:HSPG2:21830982:-:14:SUSD6:69658513:+:fusion","HSPG2--SUSD6",4.0,0.0,319.0,0.0,0.2,false,0.013468013468]
["TCGA-PAAD","TCGA-HZ-8005-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.435,false,"NA"]
["TCGA-PAAD","TCGA-HZ-8636-01A","16:JPT2:1678356:CRAMP1:1614639:rev:+","JPT2--CRAMP1",1.0,0.0,2.0,0.0,0.961,false,"NA"]
["TCGA-PAAD","TCGA-HZ-A4BH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.723,true,"NA"]
["TCGA-PAAD","TCGA-HZ-A77Q-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.469,false,"NA"]
["TCGA-PAAD","TCGA-IB-7647-01A","6:GMDS:1930103:-:20:APCDD1L-AS1:58573576:+:fusion","GMDS--APCDD1L-AS1",1.0,0.0,1.0,0.0,0.708,false,0.0141414141414]
["TCGA-PAAD","TCGA-IB-7652-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",10.0,1.0,1034.0,1.0,0.401,false,"NA"]
["TCGA-PAAD","TCGA-IB-7885-01A","17:ARMC7:75110606:SLC16A5:75103970:rev:+","ARMC7--SLC16A5",1.0,0.0,2.0,0.0,0.922,false,"NA"]
["TCGA-PAAD","TCGA-IB-7891-01A","19:SBNO2:1122894:MKNK2:2041204:rev:-","SBNO2--MKNK2",5.0,0.0,63.0,0.0,0.56,false,"NA"]
["TCGA-PAAD","TCGA-IB-8127-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",15.0,9462.0,7336.0,7317.0,0.595,true,"NA"]
["TCGA-PAAD","TCGA-IB-A6UG-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",6.0,2011.0,360.0,280.0,0.594,true,"NA"]
["TCGA-PAAD","TCGA-IB-AAUR-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.836,true,"NA"]
["TCGA-PAAD","TCGA-IB-AAUV-01A","1:BTF3L4:52086171:+:17:COL1A1:50186020:-:fusion","BTF3L4--COL1A1",2.0,0.0,1.0,0.0,0.546,false,0.0142857142857]
["TCGA-PAAD","TCGA-LB-A8F3-01A","21:TFF1:42362282:CBS:43055901:rev:-","TFF1--CBS",11.0,915.0,236.0,214.0,0.696,true,"NA"]
["TCGA-PAAD","TCGA-Q3-A5QY-01A","15:AC022748.2:78661534:+:19:RPL18:48617415:-:fusion","AC022748.2--RPL18",1.0,235.0,19.0,13.0,0.729,false,0.0]
["TCGA-PAAD","TCGA-S4-A8RO-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.463,false,"NA"]
["TCGA-PAAD","TCGA-XD-AAUG-01A","9:UGCG:111914746:GNG10:111666815:rev:+","UGCG--GNG10",1.0,2.0,2.0,1.0,0.815,false,"NA"]
["TCGA-PAAD","TCGA-XN-A8T5-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.862,true,"NA"]
["TCGA-PCPG","TCGA-P8-A5KC-11A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.551,false,"NA"]
["TCGA-PCPG","TCGA-P8-A5KD-11A","10:MIR202HG:133247791:-:9:C9orf3:95086682:+:fusion","MIR202HG--C9orf3",1.0,0.0,1.0,0.0,0.811,false,0.00387596899225]
["TCGA-PCPG","TCGA-QR-A6GO-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",6.0,2404.0,367.0,349.0,0.63,true,"NA"]
["TCGA-PCPG","TCGA-QR-A6GZ-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",18.0,0.0,1126.0,0.0,0.639290838885002,false,"NA"]
["TCGA-PCPG","TCGA-QR-A700-01A","19:NDUFA3:54106446:+:X:CHST7:46597760:+:fusion","NDUFA3--CHST7",4.0,4989.0,1.0,1.0,0.257,true,0.0176211453744]
["TCGA-PCPG","TCGA-QR-A70A-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.479,false,"NA"]
["TCGA-PCPG","TCGA-QR-A70C-01A","20:CHGB:5923073:+:11:INS-IGF2:2133665:-:fusion","CHGB--INS-IGF2",4.0,0.0,27.0,0.0,0.41,false,0.0118577075099]
["TCGA-PCPG","TCGA-QR-A70O-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.822,true,"NA"]
["TCGA-PCPG","TCGA-QR-A70T-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.845,false,"NA"]
["TCGA-PCPG","TCGA-QT-A5XL-01A","4:TSPAN5:98658146:EIF4E:98901982:rev:-","TSPAN5--EIF4E",1.0,6.0,9.0,0.0,0.829,false,"NA"]
["TCGA-PCPG","TCGA-QT-A5XP-01A","12:HNRNPA1:54284317:LINC02381:54131990:rev:+","HNRNPA1--LINC02381",1.0,0.0,1.0,0.0,0.993,false,"NA"]
["TCGA-PCPG","TCGA-RW-A67X-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",2.0,0.0,297.0,0.0,0.435,false,0.0132275132275]
["TCGA-PCPG","TCGA-RW-A685-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.66,false,"NA"]
["TCGA-PCPG","TCGA-RW-A68D-01A","19:COLGALT1:17572602:FAM129C:17537376:rev:+","COLGALT1--FAM129C",1.0,0.0,1.0,0.0,0.863,false,"NA"]
["TCGA-PCPG","TCGA-RW-A8AZ-01A","16:RRAD:66923516:-:16:ALDOA:30068646:+:strandcross","RRAD--ALDOA",1.0,0.0,1.0,0.0,0.696,false,0.015625]
["TCGA-PCPG","TCGA-S7-A7WO-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.825,true,"NA"]
["TCGA-PCPG","TCGA-S7-A7X1-01A","13:COL4A2:110357552:+:13:COL4A1:110214015:-:strandcross","COL4A2--COL4A1",1.0,29.0,12.0,2.0,0.738,true,0.0127388535032]
["TCGA-PCPG","TCGA-SP-A6QJ-01A","15:LINC02346:26049242:SNHG14:25266431:rev:+","LINC02346--SNHG14",1.0,10.0,5.0,2.0,0.83,true,"NA"]
["TCGA-PCPG","TCGA-SQ-A6I6-01A","14:CHGA:92931702:+:7:TSC22D4:100479279:-:fusion","CHGA--TSC22D4",1.0,61.0,1.0,1.0,0.715,true,0.0130718954248]
["TCGA-PCPG","TCGA-SR-A6MR-01A","14:CHGA:92932851:+:9:DCTN3:34614101:-:fusion","CHGA--DCTN3",8.0,0.0,1.0,0.0,0.371,false,0.0146341463415]
["TCGA-PCPG","TCGA-TT-A6YK-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.828,true,"NA"]
["TCGA-PCPG","TCGA-TT-A6YP-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",2.0,2052.0,512.0,403.0,0.641,true,"NA"]
["TCGA-PCPG","TCGA-W2-A7HD-01A","14:CHGA:92932851:+:12:PRPF40B:49641908:+:fusion","CHGA--PRPF40B",2.0,0.0,1.0,0.0,0.192,false,0.0459183673469]
["TCGA-PCPG","TCGA-WB-A80O-01A","14:HECTD1:31205797:HEATR5A:31313190:rev:-","HECTD1--HEATR5A",1.0,1.0,2.0,1.0,0.892,false,"NA"]
["TCGA-PCPG","TCGA-WB-A818-01A","19:RPS15:1438892:CIRBP:1270928:rev:+","RPS15--CIRBP",1.0,0.0,1.0,0.0,0.968,false,"NA"]
["TCGA-PCPG","TCGA-WB-A81G-01A","16:AC009054.2:75381204:CFDP1:75414695:rev:-","AC009054.2--CFDP1",1.0,6.0,1.0,0.0,0.835,false,"NA"]
["TCGA-PCPG","TCGA-WB-A81I-01A","5:PAM:102867393:+:15:GALK2:49155771:+:fusion","PAM--GALK2",5.0,0.0,1.0,0.0,0.169,false,0.0904977375566]
["TCGA-PCPG","TCGA-WB-A81V-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.539,false,"NA"]
["TCGA-PCPG","TCGA-XG-A823-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.866,true,"NA"]
["TCGA-PRAD","TCGA-2A-A8W3-01A","5:ANKH:14871352:-:5:C1QTNF3-AMACR:34005899:-:rev","ANKH--C1QTNF3-AMACR",1.0,0.0,1.0,0.0,0.681,false,0.0]
["TCGA-PRAD","TCGA-2A-AAYO-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",2.0,0.0,147.0,0.0,0.49,false,"NA"]
["TCGA-PRAD","TCGA-CH-5743-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.992,true,"NA"]
["TCGA-PRAD","TCGA-CH-5744-01A","19:CALR:12943962:+:19:CCDC159:11344684:+:rev","CALR--CCDC159",2.0,0.0,1.0,0.0,0.223,false,0.0254901960784]
["TCGA-PRAD","TCGA-CH-5750-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.58,true,"NA"]
["TCGA-PRAD","TCGA-CH-5754-01A","9:KIAA1958:112487118:+:3:C3orf67:58753863:-:fusion","KIAA1958--C3orf67",1.0,0.0,1.0,0.0,0.614,false,0.00573065902579]
["TCGA-PRAD","TCGA-CH-5767-01A","17:MIF4GD:75271144:-:19:KLK3:50856334:+:fusion","MIF4GD--KLK3",3.0,0.0,1.0,0.0,0.554,false,0.00222222222222]
["TCGA-PRAD","TCGA-CH-5769-01A","19:HKR1:37359546:ZNF567:36694802:rev:+","HKR1--ZNF567",1.0,534.0,55.0,38.0,0.807,true,"NA"]
["TCGA-PRAD","TCGA-CH-5771-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.85,true,"NA"]
["TCGA-PRAD","TCGA-EJ-5495-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.45,true,"NA"]
["TCGA-PRAD","TCGA-EJ-5498-01A","8:NDRG1:133238538:-:3:TPRA1:127591095:-:fusion","NDRG1--TPRA1",2.0,0.0,1.0,0.0,0.187,false,0.0234375]
["TCGA-PRAD","TCGA-EJ-5503-01A","12:COL2A1:48004237:-:15:ZNF609:64622827:+:fusion","COL2A1--ZNF609",1.0,0.0,1.0,0.0,0.973,false,0.0]
["TCGA-PRAD","TCGA-EJ-5509-01A","19:KLK2:50876702:+:9:GRIN1:137167411:+:fusion","KLK2--GRIN1",2.0,0.0,7.0,0.0,0.2,false,0.0455445544554]
["TCGA-PRAD","TCGA-EJ-5511-01A","4:ANXA5:121669954:-:14:DHRS7:60165429:-:fusion","ANXA5--DHRS7",2.0,0.0,1.0,0.0,0.257,false,0.0264423076923]
["TCGA-PRAD","TCGA-EJ-5514-01A","19:AC011451.3:9406850:ZNF812P:9696248:rev:-","AC011451.3--ZNF812P",1.0,0.0,1.0,0.0,0.862,false,"NA"]
["TCGA-PRAD","TCGA-EJ-5518-01A","4:IGFBP7:57032426:-:X:FLNA:154360587:-:fusion","IGFBP7--FLNA",2.0,2.0,1.0,0.0,0.352,false,0.0253456221198]
["TCGA-PRAD","TCGA-EJ-5519-01A","19:PNKP:49866399:-:6:SLC44A4:31869637:-:fusion","PNKP--SLC44A4",1.0,0.0,1.0,0.0,0.775,false,0.00501253132832]
["TCGA-PRAD","TCGA-EJ-5524-01A","2:ZNF142:218642028:-:20:SULF2:47706903:-:fusion","ZNF142--SULF2",1.0,0.0,1.0,0.0,0.915,false,0.0]
["TCGA-PRAD","TCGA-EJ-7115-01A","11:CELF1:47552992:MTCH2:47625741:rev:-","CELF1--MTCH2",1.0,0.0,2.0,0.0,0.964,false,"NA"]
["TCGA-PRAD","TCGA-EJ-7123-11A","5:SH3PXD2B:172394563:-:9:STXBP1:127658375:+:fusion","SH3PXD2B--STXBP1",1.0,0.0,1.0,0.0,0.646,false,0.0102739726027]
["TCGA-PRAD","TCGA-EJ-7125-11A","17:SEPT9:77288210:+:10:TIMM23:46003203:+:fusion","SEPT9--TIMM23",2.0,0.0,1.0,0.0,0.312,false,0.00845665961945]
["TCGA-PRAD","TCGA-EJ-7218-01B","7:MINDY4:30771556:+:7:SUGCT:40684056:+:reg","MINDY4--SUGCT",1.0,0.0,1.0,0.0,0.692,false,0.00615384615385]
["TCGA-PRAD","TCGA-EJ-7315-01A","20:SULF2:47785343:-:17:GOSR1:30484663:+:fusion","SULF2--GOSR1",1.0,0.0,1.0,0.0,0.622,false,0.0117416829746]
["TCGA-PRAD","TCGA-EJ-7318-01B","16:GNPTG:1352306:+:5:C1QTNF3-AMACR:34005899:-:fusion","GNPTG--C1QTNF3-AMACR",1.0,0.0,2.0,0.0,0.837,false,0.00179211469534]
["TCGA-PRAD","TCGA-EJ-7327-01A","19:CNN2:1032921:PALM:726138:rev:+","CNN2--PALM",2.0,106.0,1.0,0.0,0.422,false,"NA"]
["TCGA-PRAD","TCGA-EJ-7328-01A","19:RPL18:48615366:-:1:PAQR6:156248090:-:fusion","RPL18--PAQR6",3.0,0.0,5.0,0.0,0.367,false,0.0163265306122]
["TCGA-PRAD","TCGA-EJ-7781-01A","19:KLK3:50860130:+:4:AFF1:87114943:+:fusion","KLK3--AFF1",2.0,0.0,6.0,0.0,0.282,false,0.0134770889488]
["TCGA-PRAD","TCGA-EJ-7782-11A","19:BORCS8:19180686:SUGP1:19303448:rev:-","BORCS8--SUGP1",1.0,0.0,1.0,0.0,0.814,false,"NA"]
["TCGA-PRAD","TCGA-EJ-7784-01A","17:RNF213:80348286:+:13:N4BP2L2:32537027:-:fusion","RNF213--N4BP2L2",3.0,0.0,260.0,0.0,0.195,false,0.0093023255814]
["TCGA-PRAD","TCGA-EJ-7788-01A","4:MRFAP1:6641258:+:17:UBB:16380799:+:fusion","MRFAP1--UBB",17.0,0.0,122.0,0.0,0.550358742848166,false,0.0193704600484]
["TCGA-PRAD","TCGA-EJ-7793-01A","17:HID1:74950743:UNC13D:75841156:rev:-","HID1--UNC13D",7.0,429.0,42.0,22.0,0.494,false,"NA"]
["TCGA-PRAD","TCGA-EJ-7797-01A","19:CIRBP:1264572:+:19:KLK3:50854949:+:reg","CIRBP--KLK3",2.0,0.0,1.0,0.0,0.411,false,0.0190217391304]
["TCGA-PRAD","TCGA-EJ-7797-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",8.0,2010.0,1976.0,1665.0,0.397,true,0.0190217391304]
["TCGA-PRAD","TCGA-EJ-A46D-01A","19:KLK3:50855001:+:1:MRPL24:156737534:-:fusion","KLK3--MRPL24",17.0,0.0,8.0,0.0,0.420571985413747,false,0.00346020761246]
["TCGA-PRAD","TCGA-EJ-A46E-01A","6:SRSF3:36602778:+:19:HNRNPL:38841749:-:fusion","SRSF3--HNRNPL",21.0,3.0,6.0,0.0,0.220884371320921,false,0.0307167235495]
["TCGA-PRAD","TCGA-EJ-A46I-01A","5:HRH2:175684309:+:1:HDAC1:32332701:+:fusion","HRH2--HDAC1",3.0,0.0,1.0,0.0,0.414,false,0.0125786163522]
["TCGA-PRAD","TCGA-EJ-A65E-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",2.0,411.0,151.0,68.0,0.783,true,"NA"]
["TCGA-PRAD","TCGA-EJ-A65M-01A","19:MAN2B1:12646516:HOOK2:12773253:rev:-","MAN2B1--HOOK2",3.0,835.0,50.0,45.0,0.406,true,"NA"]
["TCGA-PRAD","TCGA-EJ-A6RC-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.408,true,"NA"]
["TCGA-PRAD","TCGA-EJ-A7NJ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.492,false,"NA"]
["TCGA-PRAD","TCGA-EJ-A7NM-01A","1:RPL5:92833458:+:17:DCXR:82037702:-:fusion","RPL5--DCXR",2.0,0.0,2.0,0.0,0.291,false,0.0103734439834]
["TCGA-PRAD","TCGA-EJ-A8FN-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",6.0,6005.0,679.0,674.0,0.608,true,"NA"]
["TCGA-PRAD","TCGA-EJ-AB20-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.817456082855388,true,"NA"]
["TCGA-PRAD","TCGA-FC-A5OB-01A","19:KLK3:50860432:+:5:HSPA9:138566718:-:fusion","KLK3--HSPA9",2.0,0.0,1.0,0.0,0.388,false,0.00383877159309]
["TCGA-PRAD","TCGA-FC-A6HD-01A","19:KLK3:50860130:+:19:SIX5:45768627:-:strandcross","KLK3--SIX5",2.0,0.0,4.0,0.0,0.235,false,0.0149625935162]
["TCGA-PRAD","TCGA-G9-6329-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",3.0,4613.0,511.0,496.0,0.408,true,"NA"]
["TCGA-PRAD","TCGA-G9-6338-01A","13:ARHGEF7:111115691:ING1:110719229:rev:+","ARHGEF7--ING1",1.0,1.0,4.0,1.0,0.897,false,"NA"]
["TCGA-PRAD","TCGA-G9-6338-01A","19:UBA52:18572607:+:22:ARFGAP3:42823702:-:fusion","UBA52--ARFGAP3",2.0,43.0,1.0,1.0,0.432,true,0.003367003367]
["TCGA-PRAD","TCGA-G9-6343-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.823,true,"NA"]
["TCGA-PRAD","TCGA-G9-6347-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",11.0,2732.0,181.0,181.0,0.874,true,"NA"]
["TCGA-PRAD","TCGA-G9-6348-11A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",3.0,35.0,139.0,0.0,0.467,false,"NA"]
["TCGA-PRAD","TCGA-G9-6351-11A","21:MCM3AP:46235133:-:13:GTF3A:27435433:+:fusion","MCM3AP--GTF3A",7.0,0.0,1.0,0.0,0.232,false,0.0132978723404]
["TCGA-PRAD","TCGA-G9-6353-01A","19:KLK3:50860764:+:17:EIF1:41690903:+:fusion","KLK3--EIF1",24.0,0.0,34.0,0.0,0.17105707570933,false,0.0751445086705]
["TCGA-PRAD","TCGA-G9-6361-01A","1:GLUL:182382894:-:19:UNC13A:17676041:-:fusion","GLUL--UNC13A",3.0,0.0,9.0,0.0,0.462,false,0.00490196078431]
["TCGA-PRAD","TCGA-G9-6362-11A","4:PDLIM5:94657547:+:10:BCCIP:125836104:+:fusion","PDLIM5--BCCIP",1.0,0.0,1.0,0.0,0.733,false,0.00214592274678]
["TCGA-PRAD","TCGA-G9-6365-11A","2:SEPT2:241324662:ANO7:241199316:rev:+","SEPT2--ANO7",2.0,0.0,1.0,0.0,0.402,false,"NA"]
["TCGA-PRAD","TCGA-G9-6366-01A","3:COPG1:129277771:+:10:SLK:104021620:+:fusion","COPG1--SLK",8.0,2.0,1.0,0.0,0.424,false,0.0149253731343]
["TCGA-PRAD","TCGA-G9-6373-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",17.0,9462.0,7336.0,7317.0,0.843587735723491,true,"NA"]
["TCGA-PRAD","TCGA-G9-6377-01A","17:VPS53:519826:-:13:GJB2:20189603:-:fusion","VPS53--GJB2",3.0,0.0,1.0,0.0,0.192,false,0.0222841225627]
["TCGA-PRAD","TCGA-G9-6384-01A","22:MYH9:36288252:-:17:C17orf49:7014769:+:fusion","MYH9--C17orf49",2.0,0.0,1.0,0.0,0.359,false,0.0177514792899]
["TCGA-PRAD","TCGA-G9-6496-01A","12:GATC:120446829:COX6A1:120440454:rev:+","GATC--COX6A1",1.0,35.0,29.0,7.0,0.946,false,"NA"]
["TCGA-PRAD","TCGA-G9-6499-01A","19:KLK3:50860563:+:16:NARFL:733334:-:fusion","KLK3--NARFL",2.0,0.0,13.0,0.0,0.237,false,0.0109546165884]
["TCGA-PRAD","TCGA-G9-7509-01A","15:ULK3:74836805:-:19:KLK3:50854930:+:fusion","ULK3--KLK3",2.0,0.0,38.0,0.0,0.202,false,0.0321428571429]
["TCGA-PRAD","TCGA-G9-7522-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",44.0,2010.0,1976.0,1665.0,0.951889170008595,true,0.00511508951407]
["TCGA-PRAD","TCGA-G9-7525-01A","10:FAM171A1:15370956:-:13:NALCN-AS1:101049280:+:fusion","FAM171A1--NALCN-AS1",2.0,0.0,1.0,0.0,0.643,false,0.00508905852417]
["TCGA-PRAD","TCGA-G9-A9S7-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.432,false,"NA"]
["TCGA-PRAD","TCGA-HC-7075-01A","19:KLK3:50860130:+:20:SRMS:63541620:-:fusion","KLK3--SRMS",2.0,0.0,1.0,0.0,0.206,false,0.0320855614973]
["TCGA-PRAD","TCGA-HC-7078-01A","19:KLK3:50858595:+:12:ARF3:48940107:-:fusion","KLK3--ARF3",2.0,0.0,10.0,0.0,0.252,false,0.0242290748899]
["TCGA-PRAD","TCGA-HC-7081-01A","1:LINC01748:60640011:-:5:C1QTNF3-AMACR:34005899:-:fusion","LINC01748--C1QTNF3-AMACR",1.0,0.0,1.0,0.0,0.892,false,0.0171428571429]
["TCGA-PRAD","TCGA-HC-7212-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.924,true,"NA"]
["TCGA-PRAD","TCGA-HC-7736-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",4.0,0.0,192.0,0.0,0.278,false,0.0135746606335]
["TCGA-PRAD","TCGA-HC-7737-11A","11:MCAM:119311090:-:16:MYH11:15715272:-:fusion","MCAM--MYH11",5.0,0.0,23.0,0.0,0.411,false,0.0128205128205]
["TCGA-PRAD","TCGA-HC-7740-01B","11:AP003108.2:61438113:SDHAF2:61437625:rev:+","AP003108.2--SDHAF2",2.0,60.0,35.0,31.0,1.0,true,"NA"]
["TCGA-PRAD","TCGA-HC-7745-01A","3:IMPDH2:49026687:-:3:TGM4:44903884:+:strandcross","IMPDH2--TGM4",2.0,0.0,1.0,0.0,0.358,false,0.02079002079]
["TCGA-PRAD","TCGA-HC-7749-01A","4:SPON2:1172000:-:6:AMD1:110892735:+:fusion","SPON2--AMD1",2.0,0.0,1.0,0.0,0.417,false,0.0144628099174]
["TCGA-PRAD","TCGA-HC-7752-11A","12:SPRYD3:53073286:-:19:RPS16:39433761:-:fusion","SPRYD3--RPS16",10.0,0.0,8.0,0.0,0.173,false,0.0381165919283]
["TCGA-PRAD","TCGA-HC-7817-01B","11:CELF1:47564351:-:9:TJP2:69212548:+:fusion","CELF1--TJP2",2.0,3914.0,1.0,1.0,0.337,true,0.00907441016334]
["TCGA-PRAD","TCGA-HC-7821-01A","17:AC018521.2:47947891:-:19:KLK3:50858029:+:fusion","AC018521.2--KLK3",2.0,55.0,7.0,2.0,0.63,true,0.0078431372549]
["TCGA-PRAD","TCGA-HC-8256-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",28.0,2010.0,1976.0,1665.0,0.727078316744303,true,0.00615384615385]
["TCGA-PRAD","TCGA-HC-8259-11A","1:CREB3L4:153972836:+:8:CCAR2:22619150:+:fusion","CREB3L4--CCAR2",3.0,0.0,1.0,0.0,0.423,false,0.010101010101]
["TCGA-PRAD","TCGA-HC-8261-01A","15:SNRPN:24968082:SNURF:24962114:rev:+","SNRPN--SNURF",1.0,9.0,12.0,3.0,0.833,false,"NA"]
["TCGA-PRAD","TCGA-HC-8264-01B","12:MAP3K12:53499427:-:12:GDF11:55748586:+:strandcross","MAP3K12--GDF11",10.0,0.0,1.0,0.0,0.503,false,0.0048465266559]
["TCGA-PRAD","TCGA-HC-8265-01B","11:AP003108.2:61438113:SDHAF2:61437625:rev:+","AP003108.2--SDHAF2",2.0,60.0,35.0,31.0,0.808,false,"NA"]
["TCGA-PRAD","TCGA-HC-8266-01A","2:DIS3L2:232163632:+:2:SPATA3:230999569:+:rev","DIS3L2--SPATA3",4.0,0.0,1.0,0.0,0.172,false,0.0224719101124]
["TCGA-PRAD","TCGA-HC-A6AL-01A","19:KLK3:50860764:+:17:EIF1:41690903:+:fusion","KLK3--EIF1",3.0,0.0,34.0,0.0,0.356,false,0.00705882352941]
["TCGA-PRAD","TCGA-HC-A6AQ-01A","17:TP53:7668421:MYH10:8493898:rev:-","TP53--MYH10",3.0,0.0,55.0,0.0,0.486,false,"NA"]
["TCGA-PRAD","TCGA-HC-A6HX-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",5.0,3449.0,231.0,225.0,0.447,true,"NA"]
["TCGA-PRAD","TCGA-HC-A6HX-01A","2:DES:219423820:+:19:MBD3:1583380:-:fusion","DES--MBD3",8.0,35.0,1.0,1.0,0.276,true,0.00578034682081]
["TCGA-PRAD","TCGA-HC-A8CY-01A","7:PODXL:131510236:-:6:CDK19:110614666:-:fusion","PODXL--CDK19",1.0,1.0,1.0,0.0,0.788,false,0.00884955752212]
["TCGA-PRAD","TCGA-HC-A9TE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.457,true,"NA"]
["TCGA-PRAD","TCGA-HI-7171-01A","12:CPSF6:69262562:+:1:IRF2BP2:234607852:-:fusion","CPSF6--IRF2BP2",1.0,17.0,7.0,1.0,0.848,false,0.0]
["TCGA-PRAD","TCGA-J4-8200-01A","2:PPP1R7:241169867:+:13:CHAMP1:114322063:+:fusion","PPP1R7--CHAMP1",4.0,0.0,1.0,0.0,0.28,false,0.011396011396]
["TCGA-PRAD","TCGA-J4-A67N-01A","19:AC022154.1:48620799:-:7:AC006001.3:66554837:-:fusion","AC022154.1--AC006001.3",2.0,10282.0,1.0,1.0,0.446,true,0.0026525198939]
["TCGA-PRAD","TCGA-J4-A67R-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",5.0,4613.0,511.0,496.0,0.533,true,"NA"]
["TCGA-PRAD","TCGA-J4-A6G3-01A","2:NCL:231461540:-:13:TPT1:45340785:-:fusion","NCL--TPT1",2.0,0.0,17.0,0.0,0.354,false,0.0107296137339]
["TCGA-PRAD","TCGA-J4-A83I-01A","17:MED13:62032349:-:9:PCA3:76783705:+:fusion","MED13--PCA3",3.0,220.0,1.0,1.0,0.153,true,0.0247191011236]
["TCGA-PRAD","TCGA-J4-A83K-01A","X:FLNA:154361979:-:7:PDIA4:149006053:-:fusion","FLNA--PDIA4",6.0,0.0,16.0,0.0,0.2,false,0.0223214285714]
["TCGA-PRAD","TCGA-J4-AATZ-01A","16:MGRN1:4625048:HMOX2:4496146:rev:+","MGRN1--HMOX2",1.0,470.0,108.0,36.0,0.819,false,"NA"]
["TCGA-PRAD","TCGA-J9-A52D-01A","19:GAMT:1397268:-:8:RPL8:144792125:-:fusion","GAMT--RPL8",2.0,0.0,1.0,0.0,0.199,false,0.00725952813067]
["TCGA-PRAD","TCGA-J9-A8CL-01A","19:KLK3:50858175:+:17:MIR497:7018022:-:fusion","KLK3--MIR497",2.0,0.0,1.0,0.0,0.444,false,0.0106382978723]
["TCGA-PRAD","TCGA-J9-A8CN-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",15.0,2010.0,1976.0,1665.0,0.755,true,0.00316455696203]
["TCGA-PRAD","TCGA-KC-A7F3-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.869,true,0.0]
["TCGA-PRAD","TCGA-KC-A7F6-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",5.0,2909.0,156.0,153.0,0.444,true,"NA"]
["TCGA-PRAD","TCGA-KC-A7FD-01A","2:MLPH:237518648:+:6:BRD2:32976562:+:fusion","MLPH--BRD2",5.0,0.0,1.0,0.0,0.179,false,0.022633744856]
["TCGA-PRAD","TCGA-KK-A59V-01A","2:TMEM150A:85598548:ST3GAL5:85850934:rev:-","TMEM150A--ST3GAL5",7.0,627.0,7.0,6.0,0.531,true,"NA"]
["TCGA-PRAD","TCGA-KK-A5A1-01A","12:ACADS:120727189:DYNLL1:120496416:rev:+","ACADS--DYNLL1",1.0,0.0,1.0,0.0,0.98,false,"NA"]
["TCGA-PRAD","TCGA-KK-A6E0-01A","19:KLK3:50860130:+:19:TECR:14563771:+:rev","KLK3--TECR",5.0,0.0,31.0,0.0,0.22,false,0.0252100840336]
["TCGA-PRAD","TCGA-KK-A6E1-01A","1:PRKACB:84078371:+:1:MAGOH:53235635:-:strandcross","PRKACB--MAGOH",2.0,0.0,1.0,0.0,0.172,false,0.0267857142857]
["TCGA-PRAD","TCGA-KK-A6E4-01A","19:RPL18:48615393:-:11:AC068580.4:1757452:-:fusion","RPL18--AC068580.4",3.0,0.0,3.0,0.0,0.2,false,0.0167714884696]
["TCGA-PRAD","TCGA-KK-A6E6-01A","11:TAGLN:117204782:+:6:MPIG6B:31724746:+:fusion","TAGLN--MPIG6B",2.0,0.0,1.0,0.0,0.401,false,0.00655021834061]
["TCGA-PRAD","TCGA-KK-A7AP-01A","21:BACE2:41168575:+:5:C1QTNF3-AMACR:34005899:-:fusion","BACE2--C1QTNF3-AMACR",1.0,0.0,1.0,0.0,0.888,false,0.002]
["TCGA-PRAD","TCGA-KK-A7AW-01A","15:PLIN1:89671482:MESP1:89750227:rev:-","PLIN1--MESP1",1.0,0.0,1.0,0.0,0.924,false,"NA"]
["TCGA-PRAD","TCGA-KK-A7AY-01A","19:BSG:572701:+:19:SHC2:425231:-:strandcross","BSG--SHC2",2.0,24.0,29.0,6.0,0.646,false,0.0]
["TCGA-PRAD","TCGA-KK-A7B0-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.937,false,"NA"]
["TCGA-PRAD","TCGA-KK-A8I4-01A","19:NOP53:47745783:DHX34:47381980:rev:+","NOP53--DHX34",1.0,42.0,60.0,15.0,0.867,false,"NA"]
["TCGA-PRAD","TCGA-KK-A8I6-01A","12:C12orf73:103956631:-:12:PTMS:6769603:+:strandcross","C12orf73--PTMS",1.0,0.0,1.0,0.0,0.893,false,0.0]
["TCGA-PRAD","TCGA-KK-A8IC-01A","5:CD74:150402170:-:15:ANPEP:89799559:-:fusion","CD74--ANPEP",3.0,0.0,1.0,0.0,0.213,false,0.021164021164]
["TCGA-PRAD","TCGA-KK-A8IG-01A","19:KLK3:50860130:+:19:TECR:14563771:+:rev","KLK3--TECR",2.0,0.0,31.0,0.0,0.254,false,0.0142348754448]
["TCGA-PRAD","TCGA-KK-A8IM-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.44,false,0.00257731958763]
["TCGA-PRAD","TCGA-M7-A71Z-01A","19:KLK3:50856399:+:4:SPON2:1167656:-:fusion","KLK3--SPON2",1.0,0.0,1.0,0.0,0.981,false,0.0028901734104]
["TCGA-PRAD","TCGA-M7-A722-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",22.0,0.0,1758.0,0.0,0.467118659849515,false,"NA"]
["TCGA-PRAD","TCGA-MG-AAMC-01A","9:PCA3:76764555:+:5:AMACR:34005899:-:fusion","PCA3--AMACR",3.0,7.0,2.0,2.0,0.884,true,0.0]
["TCGA-PRAD","TCGA-QU-A6IM-01A","13:TPT1:45340026:-:20:ARFGEF2:49033023:+:fusion","TPT1--ARFGEF2",5.0,0.0,1.0,0.0,0.172,false,0.0294117647059]
["TCGA-PRAD","TCGA-QU-A6IO-01A","19:AC022154.1:48620799:-:14:METTL3:21508235:-:fusion","AC022154.1--METTL3",2.0,632.0,1.0,0.0,0.484,false,0.0]
["TCGA-PRAD","TCGA-QU-A6IO-01A","8:RPL8:144789802:-:18:RALBP1:9516845:+:fusion","RPL8--RALBP1",2.0,0.0,1.0,0.0,0.363,false,0.0]
["TCGA-PRAD","TCGA-V1-A8MF-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",4.0,6005.0,679.0,674.0,0.625,true,"NA"]
["TCGA-PRAD","TCGA-V1-A8MG-01A","8:IMPAD1:56957933:-:14:RBM23:22917556:-:fusion","IMPAD1--RBM23",2.0,0.0,1.0,0.0,0.196,false,0.0162601626016]
["TCGA-PRAD","TCGA-V1-A8MM-01A","11:TAGLN:117203193:+:6:BAG6:31644602:-:fusion","TAGLN--BAG6",2.0,0.0,3.0,0.0,0.436,false,0.0112044817927]
["TCGA-PRAD","TCGA-V1-A8WW-01A","6:GINM1:149566534:TAB2:149378018:rev:+","GINM1--TAB2",1.0,0.0,1.0,0.0,0.901,false,"NA"]
["TCGA-PRAD","TCGA-V1-A9O9-01A","12:TMTC2:83134302:+:6:SNX14:85543760:-:fusion","TMTC2--SNX14",11.0,3.0,174.0,0.0,0.241,false,0.0259179265659]
["TCGA-PRAD","TCGA-V1-A9OL-01A","14:DHRS7:60152939:-:11:TM7SF2:65112515:+:fusion","DHRS7--TM7SF2",2.0,0.0,1.0,0.0,0.176,false,0.0183066361556]
["TCGA-PRAD","TCGA-V1-A9OX-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",53.0,1.0,1034.0,1.0,0.893434576689953,false,"NA"]
["TCGA-PRAD","TCGA-V1-A9ZK-01A","9:GOLM1:86036348:-:19:TRPM4:49201964:+:fusion","GOLM1--TRPM4",4.0,0.0,8.0,0.0,0.155,false,0.0384615384615]
["TCGA-PRAD","TCGA-VN-A88L-01A","2:RNASEH1:3550124:-:19:KLK2:50874721:+:fusion","RNASEH1--KLK2",2.0,0.0,1.0,0.0,0.445,false,0.00609756097561]
["TCGA-PRAD","TCGA-VN-A943-01A","17:CSNK1D:82255429:-:19:KLK3:50859972:+:fusion","CSNK1D--KLK3",1.0,0.0,1.0,0.0,0.867,false,0.0]
["TCGA-PRAD","TCGA-VP-A878-01A","19:KLK3:50860764:+:17:EIF1:41690903:+:fusion","KLK3--EIF1",2.0,0.0,34.0,0.0,0.255,false,0.0173697270471]
["TCGA-PRAD","TCGA-VP-A87J-01A","14:ISCA2:74493845:+:19:KLK3:50856334:+:fusion","ISCA2--KLK3",2.0,0.0,2.0,0.0,0.384,false,0.00561797752809]
["TCGA-PRAD","TCGA-VP-A87K-01A","16:CLN3:28493786:-:5:ERGIC1:172914714:+:fusion","CLN3--ERGIC1",1.0,397.0,1.0,0.0,0.745,false,0.00246305418719]
["TCGA-PRAD","TCGA-XJ-A9DK-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.538,false,0.0111111111111]
["TCGA-PRAD","TCGA-XJ-A9DX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.867,true,"NA"]
["TCGA-PRAD","TCGA-XK-AAIW-01A","6:TUBB:30722214:+:19:KLK3:50858029:+:fusion","TUBB--KLK3",1.0,55.0,14.0,3.0,0.807,false,0.00185185185185]
["TCGA-PRAD","TCGA-XK-AAJR-01A","8:LRRC14:144524446:+:19:KLK3:50856334:+:fusion","LRRC14--KLK3",1.0,0.0,1.0,0.0,0.967,false,0.0]
["TCGA-PRAD","TCGA-YJ-A8SW-01A","3:FSTL1:120450684:HGD:120652651:rev:-","FSTL1--HGD",2.0,0.0,1.0,0.0,0.607,false,"NA"]
["TCGA-PRAD","TCGA-YL-A8HK-01A","13:ATP11A:112880649:+:19:KLK3:50854915:+:fusion","ATP11A--KLK3",1.0,0.0,1.0,0.0,0.871,false,0.0]
["TCGA-PRAD","TCGA-YL-A8HL-01A","12:CPSF6:69262562:+:16:CHMP1A:89647331:-:fusion","CPSF6--CHMP1A",1.0,94.0,88.0,34.0,0.962,false,0.0]
["TCGA-PRAD","TCGA-YL-A8SA-01A","9:TRAF2:136889562:+:9:DENND4C:19276158:+:rev","TRAF2--DENND4C",2.0,561.0,1.0,0.0,0.231,false,0.0207715133531]
["TCGA-PRAD","TCGA-YL-A8SC-01A","6:RGS17:153131124:-:5:C1QTNF3-AMACR:34005899:-:fusion","RGS17--C1QTNF3-AMACR",2.0,0.0,1.0,0.0,0.301,false,0.00643776824034]
["TCGA-PRAD","TCGA-YL-A8SO-01B","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",3.0,0.0,267.0,0.0,0.519,false,"NA"]
["TCGA-PRAD","TCGA-YL-A9WH-01A","16:AC092326.1:16659597:NDE1:15694165:rev:+","AC092326.1--NDE1",1.0,710.0,28.0,19.0,0.908,false,"NA"]
["TCGA-PRAD","TCGA-YL-A9WX-01A","12:ELK3:96247734:+:19:HNRNPUL1:41305832:+:fusion","ELK3--HNRNPUL1",2.0,0.0,4.0,0.0,0.296,false,0.018]
["TCGA-PRAD","TCGA-YL-A9WY-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.45,false,"NA"]
["TCGA-PRAD","TCGA-ZG-A8QY-01A","14:CKB:103520122:-:9:ABCA2:137014038:-:fusion","CKB--ABCA2",3.0,0.0,9.0,0.0,0.201,false,0.0149700598802]
["TCGA-PRAD","TCGA-ZG-A9L2-01A","9:RABEPK:125232745:+:15:PLA2G4B:41837775:+:fusion","RABEPK--PLA2G4B",4.0,4851.0,1.0,1.0,0.999,true,0.0]
["TCGA-PRAD","TCGA-ZG-A9L6-01A","3:ABCC5:183988573:LINC01840:184547177:rev:-","ABCC5--LINC01840",3.0,0.0,182.0,0.0,0.415,false,"NA"]
["TCGA-PRAD","TCGA-ZG-A9LZ-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",7.0,0.0,225.0,0.0,0.246,false,0.019512195122]
["TCGA-PRAD","TCGA-ZG-A9ND-01A","19:KLK3:50860130:+:16:RHBDF1:64829:-:fusion","KLK3--RHBDF1",2.0,0.0,6.0,0.0,0.248,false,0.0]
["TCGA-READ","TCGA-AF-3911-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",10.0,0.0,1499.0,0.0,0.295,false,0.00881057268722]
["TCGA-READ","TCGA-AF-5654-11A","10:MINDY3:15860206:RSU1:16782084:rev:-","MINDY3--RSU1",1.0,0.0,5.0,0.0,0.802,false,"NA"]
["TCGA-READ","TCGA-AG-3725-01A","12:KRT8:52898461:-:10:TIMM23:46003203:+:fusion","KRT8--TIMM23",2.0,20.0,1.0,0.0,0.459,false,0.025069637883]
["TCGA-READ","TCGA-AG-3742-01A","6:NHSL1:138447001:REPS1:138914761:rev:-","NHSL1--REPS1",2.0,0.0,1.0,0.0,0.547,false,"NA"]
["TCGA-READ","TCGA-AH-6643-11A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",7.0,7942.0,781.0,771.0,0.379,true,0.0191693290735]
["TCGA-READ","TCGA-CI-6619-01B","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.437,false,"NA"]
["TCGA-READ","TCGA-DC-4749-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",50.0,1.0,1034.0,1.0,0.788240973829518,false,"NA"]
["TCGA-READ","TCGA-DC-6154-01A","1:SLC44A3-AS1:94819956:ALG14:95027260:rev:-","SLC44A3-AS1--ALG14",1.0,2.0,4.0,1.0,0.969,false,"NA"]
["TCGA-READ","TCGA-DC-6158-01A","13:ABCC4:95206532:DZIP1:95594086:rev:-","ABCC4--DZIP1",1.0,0.0,1.0,0.0,0.922,false,"NA"]
["TCGA-READ","TCGA-DY-A1DD-01A","19:SAFB2:5586999:DENND1C:6477588:rev:-","SAFB2--DENND1C",8.0,0.0,13.0,0.0,0.467,false,"NA"]
["TCGA-READ","TCGA-EF-5830-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.61,false,"NA"]
["TCGA-READ","TCGA-EI-6510-01A","19:AC002116.2:36019384:LSR:35258945:rev:+","AC002116.2--LSR",1.0,0.0,1.0,0.0,0.822,false,"NA"]
["TCGA-READ","TCGA-EI-6512-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",16.0,210.0,4870.0,17.0,0.777533642744868,false,"NA"]
["TCGA-READ","TCGA-F5-6571-01A","20:SRC:37365277:RPN2:37236580:rev:+","SRC--RPN2",1.0,0.0,1.0,0.0,0.869,false,"NA"]
["TCGA-READ","TCGA-F5-6810-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.403,true,"NA"]
["TCGA-READ","TCGA-F5-6863-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.719,true,"NA"]
["TCGA-READ","TCGA-G5-6641-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",13.0,9462.0,7336.0,7317.0,0.923,true,"NA"]
["TCGA-SARC","TCGA-3B-A9HR-01A","10:VIM:17229870:+:11:ILK:6603782:+:fusion","VIM--ILK",3.0,0.0,11.0,0.0,0.292,false,0.0260115606936]
["TCGA-SARC","TCGA-3B-A9HS-01A","17:ACACA:37358999:-:21:APP:26053348:-:fusion","ACACA--APP",2.0,0.0,1.0,0.0,0.625,false,0.00877192982456]
["TCGA-SARC","TCGA-3B-A9HV-01A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",2.0,13.0,47.0,11.0,0.709,true,0.0106007067138]
["TCGA-SARC","TCGA-3R-A8YX-01A","7:COL1A2:94427295:+:17:COL1A1:50192693:-:fusion","COL1A2--COL1A1",5.0,1905.0,3.0,3.0,0.224,true,0.0300751879699]
["TCGA-SARC","TCGA-DX-A1KX-01A","1:SPATA6:48452994:-:1:FAF1:50655528:-:rev","SPATA6--FAF1",3.0,0.0,1.0,0.0,0.638,false,0.0]
["TCGA-SARC","TCGA-DX-A1L0-01A","9:KANK1:504754:+:5:DNAH5:13931244:-:fusion","KANK1--DNAH5",2.0,0.0,1.0,0.0,0.61,false,0.00462962962963]
["TCGA-SARC","TCGA-DX-A1L2-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.952,true,"NA"]
["TCGA-SARC","TCGA-DX-A23V-01A","1:SHC1:154962298:GON4L:155784389:rev:-","SHC1--GON4L",10.0,8277.0,230.0,230.0,0.779,true,"NA"]
["TCGA-SARC","TCGA-DX-A240-01A","17:COL1A1:50189377:-:4:SLIT2:20620404:+:fusion","COL1A1--SLIT2",2.0,0.0,1.0,0.0,0.449,false,0.0117994100295]
["TCGA-SARC","TCGA-DX-A2J1-01A","9:ZNF883:113001994:-:11:MMP27:102703118:-:fusion","ZNF883--MMP27",2.0,0.0,1.0,0.0,0.581,false,0.00663716814159]
["TCGA-SARC","TCGA-DX-A2J4-01A","5:MAML1:179733427:+:17:COL1A1:50185648:-:fusion","MAML1--COL1A1",2.0,0.0,1.0,0.0,0.312,false,0.0402144772118]
["TCGA-SARC","TCGA-DX-A3LU-01A","11:STT3A:125620888:+:14:AL157871.4:100333790:+:fusion","STT3A--AL157871.4",25.0,6382.0,3.0,3.0,0.685138178749329,true,0.0016155088853]
["TCGA-SARC","TCGA-DX-A3LU-01A","9:RPL12:127447677:-:19:RPL12P42:13157982:-:fusion","RPL12--RPL12P42",3.0,0.0,1.0,0.0,0.2,false,0.0145395799677]
["TCGA-SARC","TCGA-DX-A3M2-01A","19:ZNF574:42081549:AC243960.1:41554951:rev:+","ZNF574--AC243960.1",2.0,0.0,90.0,0.0,0.523,false,"NA"]
["TCGA-SARC","TCGA-DX-A3M2-01A","14:LGMN:92703807:-:7:COL1A2:94430247:+:fusion","LGMN--COL1A2",4.0,0.0,1.0,0.0,0.199,false,0.0092936802974]
["TCGA-SARC","TCGA-DX-A3U6-01A","17:H3F3B:75778250:UNC13D:75841156:rev:-","H3F3B--UNC13D",8.0,5703.0,236.0,234.0,0.562,true,"NA"]
["TCGA-SARC","TCGA-DX-A3UA-01A","19:AC008894.1:16104101:-:11:SERPINH1:75571781:+:fusion","AC008894.1--SERPINH1",5.0,575.0,7.0,5.0,0.286,true,0.0128205128205]
["TCGA-SARC","TCGA-DX-A3UE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.758,true,"NA"]
["TCGA-SARC","TCGA-DX-A48O-01A","11:CELF1:47524524:MTCH2:47627127:rev:-","CELF1--MTCH2",3.0,0.0,1.0,0.0,0.458,false,"NA"]
["TCGA-SARC","TCGA-DX-A48P-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.664,false,"NA"]
["TCGA-SARC","TCGA-DX-A6B9-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",1.0,2010.0,1976.0,1665.0,0.905,false,0.00789473684211]
["TCGA-SARC","TCGA-DX-A6BB-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.842,true,"NA"]
["TCGA-SARC","TCGA-DX-A6BG-01A","11:MCAM:119311090:-:11:TMX2:57737608:+:strandcross","MCAM--TMX2",2.0,0.0,1.0,0.0,0.216,false,0.0169491525424]
["TCGA-SARC","TCGA-DX-A6YR-01A","5:RACK1:181238170:-:X:TIMP1:47584936:+:fusion","RACK1--TIMP1",2.0,0.0,1.0,0.0,0.291,false,0.012084592145]
["TCGA-SARC","TCGA-DX-A7EI-01A","1:LINC01681:170174706:+:1:S100A1:153631698:+:rev","LINC01681--S100A1",1.0,0.0,1.0,0.0,0.959,false,0.0]
["TCGA-SARC","TCGA-DX-A7EQ-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",13.0,0.0,1758.0,0.0,0.589,false,"NA"]
["TCGA-SARC","TCGA-DX-A7ES-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",3.0,29.0,70.0,0.0,0.5,false,"NA"]
["TCGA-SARC","TCGA-DX-A8BM-01A","5:PLPP1:55534572:-:5:SKIV2L2:55422878:+:strandcross","PLPP1--SKIV2L2",1.0,1.0,14.0,1.0,0.835,false,0.00343642611684]
["TCGA-SARC","TCGA-DX-A8BP-01A","1:AL139220.2:44048486:ST3GAL3:43838219:rev:+","AL139220.2--ST3GAL3",1.0,0.0,1.0,0.0,0.909,false,"NA"]
["TCGA-SARC","TCGA-DX-A8BX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.79,true,"NA"]
["TCGA-SARC","TCGA-DX-AB2E-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.678,true,"NA"]
["TCGA-SARC","TCGA-DX-AB2O-01A","16:ABCC1:16007992:NDE1:15664736:rev:+","ABCC1--NDE1",1.0,0.0,1.0,0.0,0.83,false,"NA"]
["TCGA-SARC","TCGA-DX-AB2P-01A","21:APP:25954590:CYYR1:26468631:rev:-","APP--CYYR1",1.0,0.0,1.0,0.0,0.964,false,"NA"]
["TCGA-SARC","TCGA-DX-AB30-01A","7:COL1A2:94425857:+:17:COL1A1:50192850:-:fusion","COL1A2--COL1A1",4.0,2410.0,81.0,72.0,0.154,true,0.0283400809717]
["TCGA-SARC","TCGA-DX-AB35-01A","12:TBK1:64452187:+:12:AC078923.1:75631314:-:strandcross","TBK1--AC078923.1",1.0,0.0,1.0,0.0,0.772,false,0.0048309178744]
["TCGA-SARC","TCGA-FX-A2QS-01A","12:RAB3IP:69756663:+:X:HEPH:66170558:+:fusion","RAB3IP--HEPH",1.0,0.0,1.0,0.0,0.884,false,0.00285714285714]
["TCGA-SARC","TCGA-FX-A2QS-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.933,true,"NA"]
["TCGA-SARC","TCGA-FX-A48G-01A","7:GNB2:100678810:NYAP1:100493646:rev:+","GNB2--NYAP1",2.0,0.0,4.0,0.0,0.448,false,"NA"]
["TCGA-SARC","TCGA-HB-A3L4-01A","1:LMNA:156139317:+:12:ARL6IP4:122982031:+:fusion","LMNA--ARL6IP4",4.0,0.0,7.0,0.0,0.202,false,0.0334448160535]
["TCGA-SARC","TCGA-HB-A3YV-01A","7:FLNC:128843577:+:6:KLHDC3:43018145:+:fusion","FLNC--KLHDC3",1.0,0.0,1.0,0.0,0.647,false,0.0127551020408]
["TCGA-SARC","TCGA-IE-A3OV-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.422,false,"NA"]
["TCGA-SARC","TCGA-IE-A4EI-01A","8:CLU:27606354:-:5:SQSTM1:179836436:+:fusion","CLU--SQSTM1",2.0,0.0,1.0,0.0,0.278,false,0.030888030888]
["TCGA-SARC","TCGA-IS-A3K6-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.838,true,"NA"]
["TCGA-SARC","TCGA-IS-A3K8-01A","1:FAM212B-AS1:111740077:+:1:TMIGD3:111490762:-:strandcross","FAM212B-AS1--TMIGD3",1.0,0.0,1.0,0.0,0.938,false,0.00662251655629]
["TCGA-SARC","TCGA-JV-A5VE-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.522,true,"NA"]
["TCGA-SARC","TCGA-JV-A75J-01A","9:SPTAN1:128599495:+:17:RPL38:74203693:+:fusion","SPTAN1--RPL38",4.0,2614.0,20.0,16.0,0.472,true,0.00751879699248]
["TCGA-SARC","TCGA-K1-A3PN-01A","19:PPP1R12C:55098784:-:19:CNN2:1036130:+:strandcross","PPP1R12C--CNN2",1.0,51.0,42.0,17.0,0.732,false,0.00943396226415]
["TCGA-SARC","TCGA-K1-A42W-01A","19:ERCC1:45414861:EML2:45628795:rev:-","ERCC1--EML2",2.0,1038.0,5.0,5.0,0.549,true,"NA"]
["TCGA-SARC","TCGA-K1-A6RU-01A","12:MYL6:56158404:+:9:GSN:121324554:+:fusion","MYL6--GSN",3.0,0.0,2.0,0.0,0.237,false,0.0145719489982]
["TCGA-SARC","TCGA-KD-A5QT-01A","17:DDX5:64503430:-:19:GTPBP3:17341478:+:fusion","DDX5--GTPBP3",7.0,0.0,2.0,0.0,0.333,false,0.0353697749196]
["TCGA-SARC","TCGA-KD-A5QU-01A","17:LRRC75A-AS1:16441738:+:12:AC137590.1:132080460:-:fusion","LRRC75A-AS1--AC137590.1",2.0,707.0,1.0,0.0,0.42,false,0.0117370892019]
["TCGA-SARC","TCGA-MB-A5YA-01A","X:MAOA:43746821:+:4:PGRMC2:128271413:-:fusion","MAOA--PGRMC2",5.0,0.0,1.0,0.0,0.152,false,0.0274599542334]
["TCGA-SARC","TCGA-MJ-A68H-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.932,true,"NA"]
["TCGA-SARC","TCGA-PC-A5DL-01A","11:TAGLN:117204778:+:11:DDX10:108715879:+:rev","TAGLN--DDX10",3.0,11.0,3.0,0.0,0.338,false,0.0216049382716]
["TCGA-SARC","TCGA-PC-A5DO-01A","9:FBXW2:120793149:RAB14:121187019:rev:-","FBXW2--RAB14",1.0,0.0,2.0,0.0,0.966,false,"NA"]
["TCGA-SARC","TCGA-QC-A6FX-01A","19:MAP1S:17728981:+:15:B2M:44717844:+:fusion","MAP1S--B2M",3.0,0.0,2.0,0.0,0.231,false,0.0151515151515]
["TCGA-SARC","TCGA-QQ-A5V9-01A","5:TRIO:14406672:+:5:TERT:1282624:-:strandcross","TRIO--TERT",1.0,1.0,1.0,0.0,0.966,false,0.0]
["TCGA-SARC","TCGA-RN-AAAQ-01A","14:MAP4K5:50456516:-:14:OR4N2:19827440:+:strandcross","MAP4K5--OR4N2",1.0,0.0,1.0,0.0,0.833,false,0.0]
["TCGA-SARC","TCGA-SG-A6Z7-01A","12:FKBP11:48924826:-:17:COL1A1:50188795:-:fusion","FKBP11--COL1A1",2.0,0.0,1.0,0.0,0.39,false,0.0235602094241]
["TCGA-SARC","TCGA-SI-A71O-06A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",5.0,7942.0,781.0,771.0,0.183,true,0.02]
["TCGA-SARC","TCGA-VT-A80J-01A","1:EPS15:51519199:NRDC:51840514:rev:-","EPS15--NRDC",1.0,3.0,7.0,2.0,0.895,false,"NA"]
["TCGA-SARC","TCGA-WK-A8XX-01A","13:COL4A2:110308123:+:13:COL4A1:110242734:-:strandcross","COL4A2--COL4A1",3.0,42.0,7.0,7.0,0.775,true,0.0]
["TCGA-SARC","TCGA-X2-A95T-01A","2:COL3A1:189004143:+:6:HLA-B:31356905:-:fusion","COL3A1--HLA-B",2.0,0.0,7.0,0.0,0.223,false,0.0375939849624]
["TCGA-SARC","TCGA-X6-A7WA-01A","9:TJP2:69174432:PGM5:68378199:rev:+","TJP2--PGM5",1.0,0.0,1.0,0.0,0.828,false,"NA"]
["TCGA-SARC","TCGA-X6-A8C6-01A","12:CRACR2A:3696772:-:12:SYT10:33426495:-:rev","CRACR2A--SYT10",2.0,0.0,1.0,0.0,0.451,false,0.0191693290735]
["TCGA-SARC","TCGA-Z4-A8JB-01A","17:COL1A1:50186317:-:1:ATPIF1:28236361:+:fusion","COL1A1--ATPIF1",2.0,0.0,16.0,0.0,0.206,false,0.0382165605096]
["TCGA-SKCM","TCGA-BF-A1PV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.512,true,"NA"]
["TCGA-SKCM","TCGA-BF-A1Q0-01A","12:CD63:55727151:-:19:RPL13A:49491425:+:fusion","CD63--RPL13A",2.0,0.0,1.0,0.0,0.296,false,0.0199115044248]
["TCGA-SKCM","TCGA-BF-A5EQ-01A","1:TRNP1:26994612:+:1:TAGLN2:159920537:-:strandcross","TRNP1--TAGLN2",2.0,0.0,1.0,0.0,0.359,false,0.018018018018]
["TCGA-SKCM","TCGA-BF-A5ES-01A","19:APOE:44907952:+:12:AC006064.4:6537985:-:fusion","APOE--AC006064.4",10.0,0.0,2.0,0.0,0.614,false,0.0674846625767]
["TCGA-SKCM","TCGA-BF-AAP4-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",12.0,0.0,1499.0,0.0,0.162,false,0.0116959064327]
["TCGA-SKCM","TCGA-D3-A1Q3-06A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",4.0,4574.0,830.0,638.0,0.166,true,0.0231481481481]
["TCGA-SKCM","TCGA-D3-A1Q7-06A","6:HLA-DRA:32443921:+:22:TYMP:50526156:-:fusion","HLA-DRA--TYMP",2.0,0.0,1.0,0.0,0.541,false,0.0122591943958]
["TCGA-SKCM","TCGA-D3-A2J6-06A","1:CDK18:205504796:CNTN2:205057921:rev:+","CDK18--CNTN2",1.0,0.0,1.0,0.0,0.945,false,"NA"]
["TCGA-SKCM","TCGA-D3-A2J7-06A","17:LUC7L3:50751004:+:14:AL157871.4:100333790:+:fusion","LUC7L3--AL157871.4",3.0,707.0,1.0,0.0,0.172,false,0.042817679558]
["TCGA-SKCM","TCGA-D3-A2JC-06A","15:LINC01314:80195484:-:17:CD68:7579491:+:fusion","LINC01314--CD68",2.0,0.0,1.0,0.0,0.226,false,0.0171428571429]
["TCGA-SKCM","TCGA-D3-A2JC-06A","5:SQSTM1:179824323:+:9:GALT:34646773:+:fusion","SQSTM1--GALT",3.0,0.0,1.0,0.0,0.368,false,0.00914285714286]
["TCGA-SKCM","TCGA-D3-A2JG-06A","19:RPL28:55386693:+:19:CAPN12:38731023:-:strandcross","RPL28--CAPN12",2.0,0.0,1.0,0.0,0.455,false,0.014409221902]
["TCGA-SKCM","TCGA-D3-A2JP-06A","11:CD81:2396906:+:12:SHMT2:57234003:+:fusion","CD81--SHMT2",2.0,0.0,1.0,0.0,0.401,false,0.00569800569801]
["TCGA-SKCM","TCGA-D3-A3C7-06A","2:ADAM17:9555509:YWHAQ:9591515:rev:-","ADAM17--YWHAQ",2.0,7.0,17.0,5.0,0.84,true,"NA"]
["TCGA-SKCM","TCGA-D3-A3CB-06A","7:ACTB:5528470:-:19:LSM14A:34172566:+:fusion","ACTB--LSM14A",2.0,0.0,5.0,0.0,0.261,false,0.0234741784038]
["TCGA-SKCM","TCGA-D3-A3MO-06A","2:IGFBP2:216661917:+:19:POLRMT:625212:-:fusion","IGFBP2--POLRMT",2.0,0.0,1.0,0.0,0.343,false,0.0198863636364]
["TCGA-SKCM","TCGA-D3-A3MU-06A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.59,false,"NA"]
["TCGA-SKCM","TCGA-D3-A51J-06A","17:SLC5A10:18950858:+:2:CAD:27237379:+:fusion","SLC5A10--CAD",1.0,3448.0,7.0,4.0,0.749,true,0.0028818443804]
["TCGA-SKCM","TCGA-D3-A51T-06A","19:IFI30:18178117:+:2:PCBP1-AS1:70087343:-:fusion","IFI30--PCBP1-AS1",16.0,234.0,17.0,0.0,0.264193081735398,false,0.00541516245487]
["TCGA-SKCM","TCGA-D3-A5GR-06A","21:COL6A1:46002401:+:19:TMEM259:1010895:-:fusion","COL6A1--TMEM259",2.0,0.0,1.0,0.0,0.458,false,0.00687622789784]
["TCGA-SKCM","TCGA-D3-A8GI-06A","20:ATRN:3604262:PTPRA:2964272:rev:+","ATRN--PTPRA",1.0,0.0,1.0,0.0,0.81,false,"NA"]
["TCGA-SKCM","TCGA-D3-A8GJ-06A","1:TBX15:118987591:-:1:AP4B1:113904793:-:reg","TBX15--AP4B1",1.0,0.0,1.0,0.0,0.82,false,0.0]
["TCGA-SKCM","TCGA-D9-A148-06A","X:SAT1:23783883:+:12:PMEL:55956219:-:fusion","SAT1--PMEL",1.0,0.0,1.0,0.0,0.986,false,0.0]
["TCGA-SKCM","TCGA-D9-A1JW-06A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.432,true,"NA"]
["TCGA-SKCM","TCGA-D9-A3Z3-06A","9:RPS6:19378368:-:9:CLTA:36210625:+:strandcross","RPS6--CLTA",3.0,0.0,3.0,0.0,0.184,false,0.0622222222222]
["TCGA-SKCM","TCGA-D9-A4Z5-01A","19:TMEM38A:16661341:+:19:CHERP:16535636:-:strandcross","TMEM38A--CHERP",1.0,0.0,1.0,0.0,0.92,false,0.00313479623824]
["TCGA-SKCM","TCGA-D9-A6EA-06A","4:MAEA:1289982:CTBP1-AS2:1287605:rev:+","MAEA--CTBP1-AS2",1.0,7.0,10.0,3.0,0.926,false,"NA"]
["TCGA-SKCM","TCGA-DA-A1HY-06A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",73.0,2324.0,521.0,517.0,0.192045358460756,true,0.0063829787234]
["TCGA-SKCM","TCGA-DA-A1I1-06A","10:VIM:17229870:+:1:AL591806.3:161038962:-:fusion","VIM--AL591806.3",5.0,0.0,23.0,0.0,0.215,false,0.0324074074074]
["TCGA-SKCM","TCGA-DA-A1I8-06A","12:C1S:7068530:+:16:MT2A:56608595:+:fusion","C1S--MT2A",1.0,0.0,1.0,0.0,0.653,false,0.0076726342711]
["TCGA-SKCM","TCGA-DA-A1IB-06A","14:IGHG4:105624896:-:19:RPS19:41860446:+:fusion","IGHG4--RPS19",2.0,0.0,1.0,0.0,0.363,false,0.0358744394619]
["TCGA-SKCM","TCGA-DA-A95V-06A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",20.0,0.0,192.0,0.0,0.274801913408368,false,0.0265060240964]
["TCGA-SKCM","TCGA-EB-A1NK-01A","11:RPLP2:812871:+:19:P2RY11:10112104:+:fusion","RPLP2--P2RY11",46.0,5819.0,29.0,16.0,0.830831391594876,false,0.00185528756957]
["TCGA-SKCM","TCGA-EB-A3XD-01A","15:MGA:41669958:NUSAP1:41351964:rev:+","MGA--NUSAP1",2.0,533.0,11.0,6.0,0.581,true,"NA"]
["TCGA-SKCM","TCGA-EB-A3XE-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",4.0,0.0,98.0,0.0,0.178,false,0.0]
["TCGA-SKCM","TCGA-EB-A41A-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.804203822167553,false,"NA"]
["TCGA-SKCM","TCGA-EB-A44Q-06A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.595,true,"NA"]
["TCGA-SKCM","TCGA-EB-A4OY-01A","3:QARS:49095939:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,29.0,70.0,0.0,0.448,false,"NA"]
["TCGA-SKCM","TCGA-EB-A4P0-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.425,false,"NA"]
["TCGA-SKCM","TCGA-EB-A57M-01A","16:GLG1:74451959:RNU6-758P:75286800:rev:-","GLG1--RNU6-758P",2.0,149.0,27.0,0.0,0.413,false,"NA"]
["TCGA-SKCM","TCGA-EB-A5SE-01A","12:LDHB:21638368:-:16:CD2BP2:30355291:-:fusion","LDHB--CD2BP2",5.0,0.0,1.0,0.0,0.271,false,0.0193236714976]
["TCGA-SKCM","TCGA-EB-A5SE-01A","9:RPL7A:133351071:+:11:CD81-AS1:2377989:-:fusion","RPL7A--CD81-AS1",2.0,0.0,1.0,0.0,0.209,false,0.0265700483092]
["TCGA-SKCM","TCGA-EB-A5UL-06A","19:AP3D1:2151239:GNG7:2646280:rev:-","AP3D1--GNG7",1.0,0.0,1.0,0.0,0.814,false,"NA"]
["TCGA-SKCM","TCGA-EB-A5UN-06A","7:SUMF2:56078508:+:17:ASB16-AS1:44183069:-:fusion","SUMF2--ASB16-AS1",9.0,6448.0,2.0,2.0,0.173,true,0.0328282828283]
["TCGA-SKCM","TCGA-EB-A82C-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.501,false,"NA"]
["TCGA-SKCM","TCGA-EB-A85J-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.674,false,"NA"]
["TCGA-SKCM","TCGA-EE-A183-06A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.425,false,"NA"]
["TCGA-SKCM","TCGA-EE-A183-06A","8:GRINA:143992373:+:12:PMEL:55955669:-:fusion","GRINA--PMEL",3.0,0.0,5.0,0.0,0.335,false,0.00379506641366]
["TCGA-SKCM","TCGA-EE-A20C-06A","16:FUS:31184002:+:1:ATP1A1:116398930:+:fusion","FUS--ATP1A1",2.0,0.0,2.0,0.0,0.229,false,0.032319391635]
["TCGA-SKCM","TCGA-EE-A29B-06A","2:SMPD4:130159513:FAM168B:131071938:rev:-","SMPD4--FAM168B",2.0,2260.0,44.0,39.0,0.568,true,"NA"]
["TCGA-SKCM","TCGA-EE-A29L-06A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",5.0,0.0,147.0,0.0,0.52,false,"NA"]
["TCGA-SKCM","TCGA-EE-A29Q-06A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,1.0,true,"NA"]
["TCGA-SKCM","TCGA-EE-A29R-06A","3:SEC61A1:128066703:+:3:ARIH2:48927462:+:rev","SEC61A1--ARIH2",2.0,2977.0,3.0,3.0,0.504,true,0.0146627565982]
["TCGA-SKCM","TCGA-EE-A2A1-06A","7:TTYH3:2632278:+:17:ASPSCR1:82009037:+:fusion","TTYH3--ASPSCR1",2.0,2.0,3.0,2.0,0.736,false,0.00441176470588]
["TCGA-SKCM","TCGA-EE-A2GB-06A","15:B2M:44716356:+:12:GNPTAB:101757310:-:fusion","B2M--GNPTAB",3.0,0.0,3.0,0.0,0.402,false,0.0144665461121]
["TCGA-SKCM","TCGA-EE-A2GE-06A","12:A2M:9076756:-:9:HSPA5:125241330:-:fusion","A2M--HSPA5",2.0,0.0,2.0,0.0,0.199,false,0.068085106383]
["TCGA-SKCM","TCGA-EE-A2GI-06A","7:PTPRZ1:122044568:+:6:FYN:111741093:-:fusion","PTPRZ1--FYN",4.0,2324.0,521.0,517.0,0.234,true,0.0181818181818]
["TCGA-SKCM","TCGA-EE-A2GO-06A","19:MIA-RAB4B:40775885:+:15:ANXA2:60363022:-:fusion","MIA-RAB4B--ANXA2",1.0,2.0,1.0,0.0,0.82,false,0.0103092783505]
["TCGA-SKCM","TCGA-EE-A2GR-06A","2:ABI2:203427269:+:13:COMMD6:75530405:-:fusion","ABI2--COMMD6",3.0,0.0,1.0,0.0,0.236,false,0.0144230769231]
["TCGA-SKCM","TCGA-EE-A2M5-06A","17:GPS2:7312660:-:1:C1orf162:111477334:+:fusion","GPS2--C1orf162",3.0,0.0,1.0,0.0,0.237,false,0.00653594771242]
["TCGA-SKCM","TCGA-EE-A2ME-06A","17:RFFL:35089105:SLFN12L:35480195:rev:-","RFFL--SLFN12L",1.0,0.0,1.0,0.0,0.884,false,"NA"]
["TCGA-SKCM","TCGA-EE-A2MH-06A","7:PCOLCE:100604217:+:4:SPP1:87981602:+:fusion","PCOLCE--SPP1",2.0,0.0,1.0,0.0,0.239,false,0.0240700218818]
["TCGA-SKCM","TCGA-EE-A2MP-06A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.937,true,"NA"]
["TCGA-SKCM","TCGA-EE-A2MU-06A","10:VIM-AS1:17229345:-:4:ADD1:2929596:+:fusion","VIM-AS1--ADD1",3.0,0.0,1.0,0.0,0.243,false,0.0223713646532]
["TCGA-SKCM","TCGA-EE-A2MU-06A","11:RHOG:3827416:-:20:GNAS:58902981:+:fusion","RHOG--GNAS",4.0,0.0,1.0,0.0,0.162,false,0.0268456375839]
["TCGA-SKCM","TCGA-EE-A3AE-06A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",1.0,13.0,47.0,11.0,0.566,false,0.0113378684807]
["TCGA-SKCM","TCGA-EE-A3J7-06A","5:NDST1:150551855:+:11:SLC3A2:62886461:+:fusion","NDST1--SLC3A2",1.0,63.0,1.0,0.0,0.691,false,0.00545454545455]
["TCGA-SKCM","TCGA-EE-A3JA-06A","12:PMEL:55954200:-:18:ZNF407:75061282:+:fusion","PMEL--ZNF407",5.0,0.0,1.0,0.0,0.504,false,0.059880239521]
["TCGA-SKCM","TCGA-EE-A3JI-06A","6:RREB1:7231907:+:6:GFOD1:13365662:-:strandcross","RREB1--GFOD1",1.0,0.0,1.0,0.0,0.775,false,0.00353356890459]
["TCGA-SKCM","TCGA-ER-A196-01A","11:OSBPL5:3100158:-:6:RMND1:151436554:-:fusion","OSBPL5--RMND1",2.0,0.0,1.0,0.0,0.603,false,0.011811023622]
["TCGA-SKCM","TCGA-ER-A19B-06A","7:GLI3:42223130:-:7:HNRNPA2B1:26197732:-:reg","GLI3--HNRNPA2B1",1.0,0.0,1.0,0.0,0.687,false,0.0147058823529]
["TCGA-SKCM","TCGA-ER-A19D-06A","12:MED13L:116237468:-:8:LINC00967:66196725:+:fusion","MED13L--LINC00967",3.0,1.0,2.0,1.0,0.707,false,0.00772200772201]
["TCGA-SKCM","TCGA-ER-A19H-06A","3:CDHR4:49798327:MON1A:49913359:rev:-","CDHR4--MON1A",2.0,234.0,49.0,17.0,0.898,true,"NA"]
["TCGA-SKCM","TCGA-ER-A19P-06A","10:MRPS16:73251763:PPP3CB:73479517:rev:-","MRPS16--PPP3CB",1.0,1.0,2.0,0.0,0.829,false,"NA"]
["TCGA-SKCM","TCGA-ER-A19Q-06A","12:PMEL:55955464:-:17:SCPEP1:57002018:+:fusion","PMEL--SCPEP1",2.0,0.0,1.0,0.0,0.239,false,0.0140186915888]
["TCGA-SKCM","TCGA-ER-A1A1-06A","14:IGHV1-18:106184901:-:17:RNF213:80289761:+:fusion","IGHV1-18--RNF213",2.0,0.0,1.0,0.0,0.405,false,0.00760456273764]
["TCGA-SKCM","TCGA-ER-A2NB-01A","8:TOP1MT:143344916:PUF60:143824396:rev:-","TOP1MT--PUF60",5.0,0.0,32.0,0.0,0.649,false,"NA"]
["TCGA-SKCM","TCGA-ER-A2NG-06A","17:PFN1:4946693:-:20:TGM2:38142199:-:fusion","PFN1--TGM2",2.0,0.0,1.0,0.0,0.321,false,0.0157170923379]
["TCGA-SKCM","TCGA-ER-A3ES-06A","11:NUMA1:72002873:-:3:EIF4A2:186786164:+:fusion","NUMA1--EIF4A2",2.0,0.0,1.0,0.0,0.315,false,0.03]
["TCGA-SKCM","TCGA-FR-A3YN-06A","11:CTSD:1753206:-:7:MICALL2:1439871:-:fusion","CTSD--MICALL2",2.0,0.0,15.0,0.0,0.464,false,0.0110864745011]
["TCGA-SKCM","TCGA-FR-A726-01A","2:LINC01907:230700323:NCL:231460866:rev:-","LINC01907--NCL",1.0,200.0,63.0,17.0,0.844,true,"NA"]
["TCGA-SKCM","TCGA-FS-A1YW-06A","14:KTN1:55670809:+:13:TPT1:45340184:-:fusion","KTN1--TPT1",2.0,0.0,1.0,0.0,0.191,false,0.0358208955224]
["TCGA-SKCM","TCGA-FS-A1YY-06A","5:CANX:179720560:+:16:PPP4C:30084666:+:fusion","CANX--PPP4C",2.0,0.0,1.0,0.0,0.238,false,0.0192837465565]
["TCGA-SKCM","TCGA-FS-A1ZA-06A","17:PGS1:78378808:+:16:KIF22:29804814:+:fusion","PGS1--KIF22",3.0,0.0,80.0,0.0,0.513,false,0.00851063829787]
["TCGA-SKCM","TCGA-FS-A1ZC-06A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",7.0,2010.0,1976.0,1665.0,0.926,true,0.00443458980044]
["TCGA-SKCM","TCGA-FS-A1ZF-06A","1:PHLDA3:201467486:-:1:SDCCAG8:243499756:+:strandcross","PHLDA3--SDCCAG8",4.0,3.0,1.0,0.0,0.262,false,0.0280373831776]
["TCGA-SKCM","TCGA-FS-A1ZK-06A","17:MYBBP1A:4548154:-:15:RPLP1:69452819:+:fusion","MYBBP1A--RPLP1",2.0,0.0,1.0,0.0,0.175,false,0.0329411764706]
["TCGA-SKCM","TCGA-FS-A1ZN-01A","9:EDF1:136862119:-:11:AP001781.2:111778350:-:fusion","EDF1--AP001781.2",2.0,0.0,1.0,0.0,0.475,false,0.013986013986]
["TCGA-SKCM","TCGA-FS-A1ZU-06A","7:ACTB:5528281:-:3:IFRD2:50290086:-:fusion","ACTB--IFRD2",2.0,0.0,1.0,0.0,0.484,false,0.0148367952522]
["TCGA-SKCM","TCGA-FS-A1ZW-06A","2:IGKC:88857161:-:19:PGPEP1:18369706:+:fusion","IGKC--PGPEP1",8.0,0.0,14.0,0.0,0.267,false,0.0205128205128]
["TCGA-SKCM","TCGA-FS-A4FC-06A","17:TRAPPC1:7930349:MYH10:8493898:rev:-","TRAPPC1--MYH10",6.0,0.0,110.0,0.0,0.401,false,"NA"]
["TCGA-SKCM","TCGA-FW-A3I3-06A","10:VIM:17229870:+:17:PPP1R9B:50139581:-:fusion","VIM--PPP1R9B",6.0,0.0,22.0,0.0,0.202,false,0.0204545454545]
["TCGA-SKCM","TCGA-FW-A5DY-06A","15:PKM:72199105:-:1:AL162258.2:153632197:-:fusion","PKM--AL162258.2",2.0,0.0,11.0,0.0,0.391,false,0.0231362467866]
["TCGA-SKCM","TCGA-GF-A4EO-06A","20:TBC1D20:436283:-:15:DUT:48341515:+:fusion","TBC1D20--DUT",2.0,0.0,1.0,0.0,0.472,false,0.0115606936416]
["TCGA-SKCM","TCGA-GN-A266-06A","11:MCAM:119311090:-:7:HNRNPA2B1:26197732:-:fusion","MCAM--HNRNPA2B1",12.0,0.0,37.0,0.0,0.673,false,0.00359066427289]
["TCGA-SKCM","TCGA-GN-A26C-01A","2:STAM2:152175603:PRPF40A:152659356:rev:-","STAM2--PRPF40A",1.0,0.0,1.0,0.0,0.936,false,"NA"]
["TCGA-SKCM","TCGA-GN-A26C-01A","3:NKIRAS1:23916784:-:10:PSAP:71817476:-:fusion","NKIRAS1--PSAP",2.0,0.0,1.0,0.0,0.445,false,0.0122699386503]
["TCGA-SKCM","TCGA-GN-A4U8-11A","21:SCAF4:31685049:-:16:CHMP1A:89647331:-:fusion","SCAF4--CHMP1A",1.0,27.0,10.0,1.0,0.813,false,0.00280898876404]
["TCGA-SKCM","TCGA-GN-A9SD-06A","19:ACTN4:38730144:+:4:HSD17B13:87315599:-:fusion","ACTN4--HSD17B13",3.0,0.0,16.0,0.0,0.17,false,0.03125]
["TCGA-SKCM","TCGA-QB-A6FS-06A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.427,true,"NA"]
["TCGA-SKCM","TCGA-QB-AA9O-06A","1:FAM189B:155247217:GON4L:155784389:rev:-","FAM189B--GON4L",2.0,1546.0,73.0,71.0,0.489,true,"NA"]
["TCGA-SKCM","TCGA-RP-A693-06A","17:ELAC2:13003479:-:20:ZGPAT:63735159:+:fusion","ELAC2--ZGPAT",2.0,0.0,1.0,0.0,0.294,false,0.036717062635]
["TCGA-SKCM","TCGA-W3-A828-06A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.539,false,0.0135746606335]
["TCGA-SKCM","TCGA-W3-AA1W-06A","19:TMEM143:48360319:PLEKHA4:48865610:rev:-","TMEM143--PLEKHA4",2.0,660.0,1.0,1.0,0.471,true,"NA"]
["TCGA-SKCM","TCGA-WE-A8ZN-06A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.523,true,0.00539083557951]
["TCGA-SKCM","TCGA-WE-AA9Y-06A","19:AC008894.1:16104101:-:X:CHST7:46597760:+:fusion","AC008894.1--CHST7",1.0,4989.0,4.0,3.0,0.856,false,0.00743494423792]
["TCGA-SKCM","TCGA-XV-A9W2-01A","5:CTNNA1:138753510:+:5:AC093206.1:118760852:-:strandcross","CTNNA1--AC093206.1",1.0,0.0,1.0,0.0,0.883,false,0.0]
["TCGA-SKCM","TCGA-XV-AAZW-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.551,false,0.00540540540541]
["TCGA-SKCM","TCGA-Z2-AA3V-06A","19:RANBP3:5917322:DENND1C:6477588:rev:-","RANBP3--DENND1C",3.0,0.0,69.0,0.0,0.471,false,"NA"]
["TCGA-STAD","TCGA-B7-5816-01A","4:BOD1L1:13627345:-:5:BOD1:173613255:-:fusion","BOD1L1--BOD1",4.0,10502.0,3.0,3.0,0.201,true,0.0221870047544]
["TCGA-STAD","TCGA-BR-4279-01A","1:TXNIP:145992435:-:19:ZNF562:9675044:-:fusion","TXNIP--ZNF562",2.0,0.0,1.0,0.0,0.482,false,0.00583941605839]
["TCGA-STAD","TCGA-BR-4362-01A","12:GAPDH:6538340:+:6:SENP6:75620663:+:fusion","GAPDH--SENP6",3.0,0.0,1.0,0.0,0.308,false,0.00460122699387]
["TCGA-STAD","TCGA-BR-6564-01A","X:COL4A5:108440206:+:X:COL4A6:108310828:-:strandcross","COL4A5--COL4A6",2.0,14.0,53.0,11.0,0.947,true,0.0]
["TCGA-STAD","TCGA-BR-7703-11A","14:NEDD8-MDP1:24217186:NEDD8:24218215:rev:-","NEDD8-MDP1--NEDD8",2.0,64.0,17.0,4.0,0.595,true,"NA"]
["TCGA-STAD","TCGA-BR-8060-01A","8:ZHX1-C8orf76:123274217:ATAD2:123380677:rev:-","ZHX1-C8orf76--ATAD2",1.0,0.0,1.0,0.0,0.9,false,"NA"]
["TCGA-STAD","TCGA-BR-8291-01A","17:ACTG1:81511927:-:7:ACTB:5530583:-:fusion","ACTG1--ACTB",2.0,13.0,3.0,2.0,0.897,true,0.0]
["TCGA-STAD","TCGA-BR-8364-01A","7:COL1A2:94416503:+:17:COL1A1:50196528:-:fusion","COL1A2--COL1A1",2.0,13.0,2.0,1.0,0.984,true,0.0]
["TCGA-STAD","TCGA-BR-8589-01A","11:CARD16:105045291:CARD17:105100779:rev:-","CARD16--CARD17",5.0,9245.0,34.0,34.0,0.608,true,"NA"]
["TCGA-STAD","TCGA-BR-8686-01A","7:KMT2E:105081797:+:7:DYNC1I1:95802680:+:rev","KMT2E--DYNC1I1",4.0,0.0,4.0,0.0,0.179,false,0.0567010309278]
["TCGA-STAD","TCGA-BR-A4CR-01A","14:PELI2:56178464:KTN1:55670729:rev:+","PELI2--KTN1",1.0,0.0,1.0,0.0,0.989,false,"NA"]
["TCGA-STAD","TCGA-BR-A4IZ-01A","7:ADAP1:919968:-:7:SUN1:869349:+:strandcross","ADAP1--SUN1",3.0,38.0,9.0,6.0,0.311,false,0.00806451612903]
["TCGA-STAD","TCGA-CD-8530-01A","10:SAR1A:70170413:PPA1:70218817:rev:-","SAR1A--PPA1",1.0,3.0,1.0,0.0,0.989,false,"NA"]
["TCGA-STAD","TCGA-CD-8535-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.808,true,"NA"]
["TCGA-STAD","TCGA-CG-4440-01A","21:COL6A1:46002401:+:12:KRT8:52897618:-:fusion","COL6A1--KRT8",2.0,403.0,1.0,1.0,0.161,true,0.00925925925926]
["TCGA-STAD","TCGA-CG-4462-01A","12:CHD4:6601289:-:2:COL6A3:237366035:-:fusion","CHD4--COL6A3",2.0,0.0,1.0,0.0,0.353,false,0.0]
["TCGA-STAD","TCGA-CG-5732-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.485,true,"NA"]
["TCGA-STAD","TCGA-D7-6519-01A","12:CPSF6:69262562:+:9:C9orf3:95086682:+:fusion","CPSF6--C9orf3",5.0,134.0,130.0,48.0,0.297,true,0.0102669404517]
["TCGA-STAD","TCGA-D7-8576-01A","5:EXOC3:468942:+:1:TRIM46:155181852:+:fusion","EXOC3--TRIM46",2.0,384.0,1.0,1.0,0.541,true,0.0]
["TCGA-STAD","TCGA-FP-A4BE-01A","20:RALY:33994131:+:20:NECAB3:33660395:-:strandcross","RALY--NECAB3",2.0,0.0,2.0,0.0,0.36,false,0.00120264582081]
["TCGA-STAD","TCGA-HF-A5NB-01A","5:TERT:1258598:CLPTM1L:1318453:rev:-","TERT--CLPTM1L",1.0,0.0,1.0,0.0,0.807,false,"NA"]
["TCGA-STAD","TCGA-HU-A4GH-01A","5:ANKHD1-EIF4EBP3:140402273:CYSTM1:140243305:rev:+","ANKHD1-EIF4EBP3--CYSTM1",1.0,3.0,9.0,2.0,0.942,false,"NA"]
["TCGA-STAD","TCGA-HU-A4H0-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",10.0,2011.0,360.0,280.0,0.75,true,"NA"]
["TCGA-STAD","TCGA-IP-7968-01A","13:CRYL1:20489370:XPO4:20843886:rev:-","CRYL1--XPO4",1.0,0.0,1.0,0.0,0.803,false,"NA"]
["TCGA-STAD","TCGA-MX-A666-01A","7:LINC00174:66493216:AC006001.3:66531871:rev:-","LINC00174--AC006001.3",1.0,0.0,1.0,0.0,0.856,false,"NA"]
["TCGA-STAD","TCGA-RD-A8MW-01A","19:ZNF814:57868487:-:16:TOX3:52519579:-:fusion","ZNF814--TOX3",3.0,113.0,1.0,1.0,0.929,true,0.0]
["TCGA-STAD","TCGA-VQ-A8PJ-01A","3:RBM6:49940225:DAG1:49510419:rev:+","RBM6--DAG1",1.0,2.0,4.0,1.0,0.875,false,"NA"]
["TCGA-STAD","TCGA-VQ-A928-01A","3:UBE2E1:23811510:UBE2E2:23499608:rev:+","UBE2E1--UBE2E2",1.0,85.0,26.0,6.0,0.815,false,"NA"]
["TCGA-STAD","TCGA-VQ-AA6F-01A","19:TCF3:1610965:MOB3A:2085392:rev:-","TCF3--MOB3A",1.0,2871.0,2.0,2.0,0.918,true,"NA"]
["TCGA-TGCT","TCGA-2G-AAFG-05A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.594,false,"NA"]
["TCGA-TGCT","TCGA-2G-AAFH-01A","17:TSR1:2329343:-:7:EIF3B:2378689:+:fusion","TSR1--EIF3B",1.0,0.0,1.0,0.0,0.788,false,0.00564971751412]
["TCGA-TGCT","TCGA-2G-AAFY-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.836,true,"NA"]
["TCGA-TGCT","TCGA-2G-AAGA-01A","4:AC106864.1:112648654:-:20:PANK2:3918671:+:fusion","AC106864.1--PANK2",3.0,22.0,4.0,4.0,0.989,true,0.0]
["TCGA-TGCT","TCGA-2G-AAGJ-01A","4:AC106864.1:112648654:-:14:ABHD12B:50901829:+:fusion","AC106864.1--ABHD12B",4.0,12.0,5.0,4.0,0.968,true,0.0]
["TCGA-TGCT","TCGA-2G-AAGX-01A","17:COL1A1:50186317:-:17:AC024267.6:28897781:+:strandcross","COL1A1--AC024267.6",2.0,0.0,4.0,0.0,0.195,false,0.0582524271845]
["TCGA-TGCT","TCGA-2G-AAGZ-01A","4:CLCN3:169695692:+:4:LINC02275:169923187:-:strandcross","CLCN3--LINC02275",1.0,0.0,1.0,0.0,0.853,false,0.00396825396825]
["TCGA-TGCT","TCGA-2G-AAKG-05A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.427,true,"NA"]
["TCGA-TGCT","TCGA-2G-AAKL-01A","19:SLC35E1:16566532:SMIM7:16647261:rev:-","SLC35E1--SMIM7",1.0,2.0,6.0,0.0,0.84,false,"NA"]
["TCGA-TGCT","TCGA-2G-AALR-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.501,false,"NA"]
["TCGA-TGCT","TCGA-2G-AALZ-01A","8:SFRP1:41261964:PLAT:42193727:rev:-","SFRP1--PLAT",6.0,35.0,139.0,0.0,0.557,false,"NA"]
["TCGA-TGCT","TCGA-4K-AA1I-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.463,false,"NA"]
["TCGA-TGCT","TCGA-SN-A6IS-01A","15:PRC1:90982622:-:1:SDCCAG8:243499756:+:fusion","PRC1--SDCCAG8",3.0,1631.0,1.0,1.0,0.266,true,0.0405405405405]
["TCGA-TGCT","TCGA-SN-A84Y-01A","2:TET3:74003166:DGUOK:73946719:rev:+","TET3--DGUOK",1.0,3.0,7.0,2.0,0.962,false,"NA"]
["TCGA-TGCT","TCGA-W4-A7U3-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.518,false,"NA"]
["TCGA-TGCT","TCGA-XE-A8H1-01A","13:TFDP1:113585849:TMCO3:113547300:rev:+","TFDP1--TMCO3",1.0,2.0,3.0,0.0,0.897,false,"NA"]
["TCGA-TGCT","TCGA-XE-AAO4-01A","13:PSPC1:19730239:ZMYM5:19835689:rev:-","PSPC1--ZMYM5",1.0,1.0,4.0,0.0,0.873,false,"NA"]
["TCGA-TGCT","TCGA-XY-A89B-01A","10:PDCD4:110872018:MXI1:110228189:rev:+","PDCD4--MXI1",1.0,0.0,1.0,0.0,0.993,false,"NA"]
["TCGA-TGCT","TCGA-YU-A90Y-01A","17:LRRC75A-AS1:16439414:+:14:FOXN3:89350808:-:fusion","LRRC75A-AS1--FOXN3",2.0,2.0,1.0,0.0,0.547,false,0.0104166666667]
["TCGA-TGCT","TCGA-YU-AA61-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.56,true,"NA"]
["TCGA-THCA","TCGA-BJ-A0Z5-01A","11:MICAL2:12110726:USP47:11903263:rev:+","MICAL2--USP47",1.0,0.0,1.0,0.0,0.968,false,"NA"]
["TCGA-THCA","TCGA-BJ-A0ZE-01A","1:ARHGEF2:155966820:CCT3:156309303:rev:-","ARHGEF2--CCT3",4.0,2.0,54.0,0.0,0.582,false,"NA"]
["TCGA-THCA","TCGA-BJ-A192-01A","19:APOE:44905923:+:8:TG:133021991:+:fusion","APOE--TG",2.0,0.0,4.0,0.0,0.395,false,0.0106100795756]
["TCGA-THCA","TCGA-BJ-A28T-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",25.0,1.0,1034.0,1.0,0.503579392133386,false,"NA"]
["TCGA-THCA","TCGA-BJ-A28X-11A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.731,false,"NA"]
["TCGA-THCA","TCGA-BJ-A291-01A","17:LRRC75A-AS1:16441742:+:22:RHBDD3:29261425:-:fusion","LRRC75A-AS1--RHBDD3",2.0,1.0,1.0,0.0,0.34,false,0.0170068027211]
["TCGA-THCA","TCGA-BJ-A2N7-11A","18:DYM:49391620:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",2.0,0.0,52.0,0.0,0.519,false,"NA"]
["TCGA-THCA","TCGA-BJ-A2P4-01A","8:CTSB:11844053:-:6:IYD:150369089:+:fusion","CTSB--IYD",3.0,0.0,2.0,0.0,0.469,false,0.00512820512821]
["TCGA-THCA","TCGA-BJ-A3PR-11A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",12.0,4613.0,511.0,496.0,0.608,true,"NA"]
["TCGA-THCA","TCGA-BJ-A45D-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",24.0,210.0,4870.0,17.0,0.813378574632601,false,"NA"]
["TCGA-THCA","TCGA-BJ-A45G-01A","15:BNIP2:59668892:ANXA2:60363022:rev:-","BNIP2--ANXA2",1.0,16.0,11.0,4.0,0.822,false,"NA"]
["TCGA-THCA","TCGA-CE-A27D-01A","19:HKR1:37359546:ZNF567:36712386:rev:+","HKR1--ZNF567",2.0,97.0,10.0,7.0,0.638,true,"NA"]
["TCGA-THCA","TCGA-CE-A3MD-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.572,true,"NA"]
["TCGA-THCA","TCGA-CE-A481-01A","3:WDR6:49009024:+:X:MAGED1:51900182:+:fusion","WDR6--MAGED1",1.0,1561.0,1.0,1.0,0.677,true,0.00795228628231]
["TCGA-THCA","TCGA-DE-A4M8-01A","14:SRP54-AS1:34963914:PPP2R3C:35116737:rev:-","SRP54-AS1--PPP2R3C",3.0,5.0,4.0,0.0,0.635,false,"NA"]
["TCGA-THCA","TCGA-DE-A69J-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",3.0,2052.0,512.0,403.0,0.672,true,"NA"]
["TCGA-THCA","TCGA-DJ-A13O-01A","10:AL360181.2:133295187:ECHS1:133362933:rev:-","AL360181.2--ECHS1",2.0,0.0,28.0,0.0,0.536,false,"NA"]
["TCGA-THCA","TCGA-DJ-A13P-01A","8:TG:133134827:+:5:RAB24:177302496:-:fusion","TG--RAB24",3.0,0.0,3.0,0.0,0.41,false,0.0214067278287]
["TCGA-THCA","TCGA-DJ-A1QF-01A","8:TG:133013764:+:16:ITGAX:31355893:+:fusion","TG--ITGAX",4.0,0.0,11.0,0.0,0.275,false,0.00303951367781]
["TCGA-THCA","TCGA-DJ-A1QM-01A","8:TG:132923508:+:6:BRPF3:36200297:+:fusion","TG--BRPF3",1.0,0.0,1.0,0.0,0.758,false,0.00536193029491]
["TCGA-THCA","TCGA-DJ-A2PN-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.407,false,"NA"]
["TCGA-THCA","TCGA-DJ-A2PS-01A","15:TRPM7:50686531:SPPL2A:50720100:rev:-","TRPM7--SPPL2A",1.0,0.0,1.0,0.0,0.906,false,"NA"]
["TCGA-THCA","TCGA-DJ-A2PZ-01A","14:SERPINA1:94379464:-:22:RPL3:39315486:-:fusion","SERPINA1--RPL3",2.0,0.0,4.0,0.0,0.29,false,0.0265957446809]
["TCGA-THCA","TCGA-DJ-A2Q1-01A","22:NUP50:45166430:+:22:RBFOX2:35761468:-:strandcross","NUP50--RBFOX2",3.0,215.0,9.0,9.0,0.29,true,0.00746268656716]
["TCGA-THCA","TCGA-DJ-A2Q3-01A","9:GSN:121332738:+:19:AC008655.1:50310539:-:fusion","GSN--AC008655.1",14.0,2273.0,15.0,7.0,0.315,true,0.0210084033613]
["TCGA-THCA","TCGA-DJ-A2QA-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",4.0,0.0,147.0,0.0,0.542,false,"NA"]
["TCGA-THCA","TCGA-DJ-A3UM-01A","8:CTSB:11844355:-:7:FSCN1:5603496:+:fusion","CTSB--FSCN1",3.0,0.0,8.0,0.0,0.265,false,0.0171673819742]
["TCGA-THCA","TCGA-DJ-A3UR-01A","8:TG:133133660:+:6:AC019205.3:73373263:-:fusion","TG--AC019205.3",8.0,0.0,12.0,0.0,0.293,false,0.0226628895184]
["TCGA-THCA","TCGA-DJ-A3UV-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",11.0,0.0,1499.0,0.0,0.217,false,0.0152671755725]
["TCGA-THCA","TCGA-DJ-A3V0-01A","2:RAB17:237574322:-:12:DCN:91145734:-:fusion","RAB17--DCN",6.0,0.0,1.0,0.0,0.238,false,0.0182767624021]
["TCGA-THCA","TCGA-DJ-A3V2-01A","19:RPS15:1440253:+:2:IGKC:88857683:-:fusion","RPS15--IGKC",3.0,0.0,3.0,0.0,0.16,false,0.0413080895009]
["TCGA-THCA","TCGA-DJ-A3V9-01A","9:GSN:121332738:+:19:AC011558.1:1039064:-:fusion","GSN--AC011558.1",4.0,1710.0,4.0,0.0,0.272,false,0.0188679245283]
["TCGA-THCA","TCGA-DJ-A3VB-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.467,true,"NA"]
["TCGA-THCA","TCGA-DJ-A3VJ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",15.0,210.0,4870.0,17.0,0.697,false,"NA"]
["TCGA-THCA","TCGA-DJ-A4UL-01A","1:CLK2:155262868:GON4L:155784389:rev:-","CLK2--GON4L",4.0,869.0,24.0,22.0,0.486,true,"NA"]
["TCGA-THCA","TCGA-DJ-A4UW-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",15.0,0.0,1126.0,0.0,0.487,false,"NA"]
["TCGA-THCA","TCGA-DJ-A4V2-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.51,false,"NA"]
["TCGA-THCA","TCGA-E3-A3DY-01A","1:CTSS:150748165:-:17:CCDC47:63761351:-:fusion","CTSS--CCDC47",2.0,140.0,1.0,0.0,0.7,false,0.0111607142857]
["TCGA-THCA","TCGA-E3-A3E1-01A","3:RNF13:149961374:+:15:AP4E1:50934536:+:fusion","RNF13--AP4E1",4.0,0.0,52.0,0.0,0.263,false,0.0161725067385]
["TCGA-THCA","TCGA-E8-A2EA-01A","6:RARS2:87518630:-:2:FN1:215372300:-:fusion","RARS2--FN1",2.0,0.0,1.0,0.0,0.158,false,0.0342052313883]
["TCGA-THCA","TCGA-E8-A416-01A","5:DBN1:177468844:DDX41:177512206:rev:-","DBN1--DDX41",1.0,0.0,1.0,0.0,0.966,false,"NA"]
["TCGA-THCA","TCGA-E8-A417-01A","19:STAP2:4329961:-:15:B2M:44711513:+:fusion","STAP2--B2M",1.0,0.0,1.0,0.0,0.78,false,0.00189035916824]
["TCGA-THCA","TCGA-E8-A437-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",7.0,0.0,1758.0,0.0,0.614,false,"NA"]
["TCGA-THCA","TCGA-E8-A438-01A","17:AC087501.3:9464865:+:3:SEC61A1:128066954:+:fusion","AC087501.3--SEC61A1",3.0,187.0,145.0,16.0,0.193,false,0.0134048257373]
["TCGA-THCA","TCGA-EL-A3CR-01A","15:PPIB:64156725:-:13:TPT1-AS1:45341345:+:fusion","PPIB--TPT1-AS1",5.0,0.0,10.0,0.0,0.163,false,0.014880952381]
["TCGA-THCA","TCGA-EL-A3CV-01A","16:ADGRG1:57651484:+:17:NLGN2:7415511:+:fusion","ADGRG1--NLGN2",2.0,0.0,1.0,0.0,0.388,false,0.0223880597015]
["TCGA-THCA","TCGA-EL-A3D4-01A","13:RB1:48381443:ITM2B:48253808:rev:+","RB1--ITM2B",1.0,28.0,53.0,14.0,0.963,false,"NA"]
["TCGA-THCA","TCGA-EL-A3D6-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",6.0,0.0,1499.0,0.0,0.399,false,0.00492610837438]
["TCGA-THCA","TCGA-EL-A3GP-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",15.0,0.0,225.0,0.0,0.402,false,0.00925925925926]
["TCGA-THCA","TCGA-EL-A3GV-01A","19:ZNF616:52122360:-:8:TG:132935756:+:fusion","ZNF616--TG",5.0,418.0,1.0,1.0,0.395,true,0.0102389078498]
["TCGA-THCA","TCGA-EL-A3GX-01A","1:GAS5:173864257:-:5:RACK1:181240327:-:fusion","GAS5--RACK1",5.0,372.0,2.0,0.0,0.212,false,0.0245231607629]
["TCGA-THCA","TCGA-EL-A3H2-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.942,true,"NA"]
["TCGA-THCA","TCGA-EL-A3H2-11A","20:GNAS:58891865:+:22:MYH9:36288413:-:fusion","GNAS--MYH9",3.0,0.0,1.0,0.0,0.444,false,0.020325203252]
["TCGA-THCA","TCGA-EL-A3H3-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",5.0,2404.0,367.0,349.0,0.553,true,"NA"]
["TCGA-THCA","TCGA-EL-A3H4-01A","6:RNASET2:166929516:-:17:PRPF8:1654980:-:fusion","RNASET2--PRPF8",2.0,961.0,8.0,5.0,0.715,true,0.00673400673401]
["TCGA-THCA","TCGA-EL-A3MX-11A","19:MAP2K2:4099990:PLIN3:4844793:rev:-","MAP2K2--PLIN3",1.0,280.0,119.0,36.0,0.961,false,"NA"]
["TCGA-THCA","TCGA-EL-A3N2-11A","5:TBCA:77776205:AP3B1:78228239:rev:-","TBCA--AP3B1",1.0,0.0,2.0,0.0,0.884,false,"NA"]
["TCGA-THCA","TCGA-EL-A3T0-11A","8:TG:133030023:+:14:TSHR:81143156:+:fusion","TG--TSHR",2.0,0.0,9.0,0.0,0.367,false,0.0264900662252]
["TCGA-THCA","TCGA-EL-A3T2-01A","8:TG:132941542:+:6:HSP90AB1:44247866:+:fusion","TG--HSP90AB1",4.0,0.0,3.0,0.0,0.255,false,0.028125]
["TCGA-THCA","TCGA-EL-A3T7-11A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",14.0,9462.0,7336.0,7317.0,0.511,true,"NA"]
["TCGA-THCA","TCGA-EL-A3TA-01A","19:AC010618.2:17520421:-:19:C19orf54:40741065:-:rev","AC010618.2--C19orf54",1.0,203.0,1.0,0.0,0.936,false,0.00289855072464]
["TCGA-THCA","TCGA-EL-A3TB-01A","10:VIM:17235889:+:1:HSPG2:21835637:-:fusion","VIM--HSPG2",6.0,0.0,1.0,0.0,0.17,false,0.021978021978]
["TCGA-THCA","TCGA-EL-A3ZK-01A","3:USP4:49335469:RHOA:49375591:rev:-","USP4--RHOA",1.0,2.0,9.0,1.0,0.939,false,"NA"]
["TCGA-THCA","TCGA-EL-A3ZM-01A","6:HEBP2:138413154:+:10:JMJD1C:63215617:-:fusion","HEBP2--JMJD1C",3.0,0.0,7.0,0.0,0.4,false,0.0]
["TCGA-THCA","TCGA-EL-A3ZP-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.816,false,"NA"]
["TCGA-THCA","TCGA-EL-A3ZR-01A","8:TG:133022150:+:16:GGA2:23466778:-:fusion","TG--GGA2",1.0,0.0,2.0,0.0,0.747,false,0.00970873786408]
["TCGA-THCA","TCGA-EL-A4JX-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",3.0,0.0,423.0,0.0,0.429,false,"NA"]
["TCGA-THCA","TCGA-EL-A4K0-01A","14:PPP2R5E:63539529:WDR89:63625033:rev:-","PPP2R5E--WDR89",1.0,0.0,1.0,0.0,0.863,false,"NA"]
["TCGA-THCA","TCGA-EL-A4K0-01A","8:CLU:27608937:-:16:AC092117.1:2777319:+:fusion","CLU--AC092117.1",2.0,0.0,11.0,0.0,0.179,false,0.0631067961165]
["TCGA-THCA","TCGA-EL-A4K2-01A","19:CRB3:6466609:+:2:TPO:1542421:+:fusion","CRB3--TPO",2.0,0.0,1.0,0.0,0.345,false,0.0229357798165]
["TCGA-THCA","TCGA-EL-A4K6-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",19.0,210.0,4870.0,17.0,0.601522072700898,false,"NA"]
["TCGA-THCA","TCGA-EL-A4K9-01A","3:SEC61A1:128060661:+:3:CNBP:129170570:-:strandcross","SEC61A1--CNBP",1.0,0.0,1.0,0.0,0.701,false,0.00983606557377]
["TCGA-THCA","TCGA-EL-A4KD-01A","17:ACTG1:81509989:-:19:TIMM13:2427046:-:fusion","ACTG1--TIMM13",17.0,0.0,7.0,0.0,0.806889175160901,false,0.0101214574899]
["TCGA-THCA","TCGA-EL-A4KG-01A","1:S100A6:153534714:-:X:FLNA:154354043:-:fusion","S100A6--FLNA",3.0,0.0,1.0,0.0,0.595,false,0.0143369175627]
["TCGA-THCA","TCGA-EL-A4KG-01A","8:CLU:27598143:-:7:AC004918.1:141656810:-:fusion","CLU--AC004918.1",12.0,0.0,1.0,0.0,0.875,false,0.00716845878136]
["TCGA-THCA","TCGA-EL-A4KI-01A","17:MIR6778:18340814:-:1:MRPL20:1402256:-:fusion","MIR6778--MRPL20",3.0,0.0,1.0,0.0,0.219,false,0.0480225988701]
["TCGA-THCA","TCGA-EL-A4KI-01A","8:TG:133133660:+:7:CLDN4:73828600:+:fusion","TG--CLDN4",13.0,0.0,1.0,0.0,0.372,false,0.0338983050847]
["TCGA-THCA","TCGA-EM-A1CV-11A","8:TG:132929192:+:1:CAPN2:223771809:+:fusion","TG--CAPN2",1.0,0.0,1.0,0.0,0.713,false,0.00733496332518]
["TCGA-THCA","TCGA-EM-A1YA-01A","14:CALM1:90405048:+:8:RPL8:144792125:-:fusion","CALM1--RPL8",2.0,0.0,4.0,0.0,0.328,false,0.0170454545455]
["TCGA-THCA","TCGA-EM-A22L-01A","11:MALAT1:65505662:+:8:TG:133011901:+:fusion","MALAT1--TG",1.0,0.0,1.0,0.0,0.882,false,0.00208333333333]
["TCGA-THCA","TCGA-EM-A22L-01A","8:TG:132972741:+:5:SIMC1:176345183:+:fusion","TG--SIMC1",1.0,0.0,1.0,0.0,0.971,false,0.0]
["TCGA-THCA","TCGA-EM-A22N-01A","8:CTSB:11844355:-:19:SHC2:436268:-:fusion","CTSB--SHC2",2.0,0.0,1.0,0.0,0.321,false,0.0214285714286]
["TCGA-THCA","TCGA-EM-A2CL-01A","8:TG:133013764:+:16:ITGAX:31355893:+:fusion","TG--ITGAX",3.0,0.0,11.0,0.0,0.353,false,0.0]
["TCGA-THCA","TCGA-EM-A2CR-01A","20:CPNE1:35626044:AL035420.2:36088192:rev:-","CPNE1--AL035420.2",13.0,378.0,71.0,4.0,0.513,false,"NA"]
["TCGA-THCA","TCGA-EM-A2CS-01A","17:LRRC75A-AS1:16441566:+:2:MEIS1:66435558:+:fusion","LRRC75A-AS1--MEIS1",4.0,38.0,2.0,0.0,0.16,false,0.0140845070423]
["TCGA-THCA","TCGA-EM-A2CU-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",11.0,9462.0,7336.0,7317.0,0.526,true,"NA"]
["TCGA-THCA","TCGA-EM-A2P1-01A","2:IGKC:88857161:-:10:PLAU:73913539:+:fusion","IGKC--PLAU",3.0,0.0,21.0,0.0,0.177,false,0.0639534883721]
["TCGA-THCA","TCGA-EM-A2P2-01A","15:USP8:50490525:+:15:SNRPN:24976305:+:rev","USP8--SNRPN",3.0,0.0,1.0,0.0,0.353,false,0.0202247191011]
["TCGA-THCA","TCGA-EM-A3AN-01A","9:RPL12:127449610:-:8:TG:133133470:+:fusion","RPL12--TG",2.0,0.0,1.0,0.0,0.344,false,0.022641509434]
["TCGA-THCA","TCGA-EM-A3AP-01A","8:CPQ:96785330:SDC2:96593480:rev:+","CPQ--SDC2",1.0,0.0,1.0,0.0,0.872,false,"NA"]
["TCGA-THCA","TCGA-EM-A3AP-01A","6:CNPY3:42934598:+:2:TPO:1413480:+:fusion","CNPY3--TPO",4.0,0.0,5.0,0.0,0.566,false,0.0175438596491]
["TCGA-THCA","TCGA-EM-A3AP-01A","8:TG:132871551:+:7:GNB2:100677498:+:fusion","TG--GNB2",2.0,0.0,1.0,0.0,0.458,false,0.028]
["TCGA-THCA","TCGA-EM-A3AP-01A","8:TG:133013683:+:11:AP002490.1:72018895:+:fusion","TG--AP002490.1",4.0,0.0,1.0,0.0,0.45,false,0.028]
["TCGA-THCA","TCGA-EM-A3FJ-01A","1:CD1E:158355940:CD1A:158257421:rev:+","CD1E--CD1A",2.0,397.0,152.0,123.0,0.419,false,"NA"]
["TCGA-THCA","TCGA-EM-A3FO-01A","5:TNIP1:151030581:-:X:SAT1:23785686:+:fusion","TNIP1--SAT1",2.0,0.0,1.0,0.0,0.298,false,0.0248756218905]
["TCGA-THCA","TCGA-EM-A3O6-01A","8:TG:133013764:+:9:TRAF2:136898713:+:fusion","TG--TRAF2",2.0,0.0,1.0,0.0,0.258,false,0.014598540146]
["TCGA-THCA","TCGA-EM-A3O9-01A","3:MED12L:151087025:EIF2A:150581618:rev:+","MED12L--EIF2A",1.0,0.0,1.0,0.0,0.984,false,"NA"]
["TCGA-THCA","TCGA-EM-A3SX-01A","2:STK36:218680702:ARPC2:218245420:rev:+","STK36--ARPC2",1.0,0.0,1.0,0.0,0.84,false,"NA"]
["TCGA-THCA","TCGA-EM-A3SY-01A","12:PPHLN1:42238661:+:9:ENDOG:128822328:+:fusion","PPHLN1--ENDOG",7.0,0.0,1.0,0.0,0.153,false,0.0259365994236]
["TCGA-THCA","TCGA-EM-A4FF-01A","19:CALR:12944403:+:2:ZFAND2B:219206880:+:fusion","CALR--ZFAND2B",3.0,0.0,2.0,0.0,0.343,false,0.0571428571429]
["TCGA-THCA","TCGA-EM-A4FF-01A","6:PRRC2A:31636250:+:13:TPT1:45341158:-:fusion","PRRC2A--TPT1",2.0,0.0,1.0,0.0,0.257,false,0.0766917293233]
["TCGA-THCA","TCGA-EM-A4FH-01A","19:RPS16:39433522:-:9:EDF1:136862496:-:fusion","RPS16--EDF1",3.0,0.0,2.0,0.0,0.267,false,0.0594965675057]
["TCGA-THCA","TCGA-EM-A4FH-01A","X:RPS4X:72272640:-:1:CERS2:150968512:-:fusion","RPS4X--CERS2",5.0,0.0,1.0,0.0,0.171,false,0.0778032036613]
["TCGA-THCA","TCGA-EM-A4FN-01A","11:RPLP2:812874:+:14:ATP5S:50321319:+:fusion","RPLP2--ATP5S",22.0,0.0,1.0,0.0,0.433839692735946,false,0.0289473684211]
["TCGA-THCA","TCGA-EM-A4FO-01A","11:APLP2:130144405:+:19:DDX49:18926303:+:fusion","APLP2--DDX49",2.0,0.0,1.0,0.0,0.354,false,0.0155709342561]
["TCGA-THCA","TCGA-EM-A4FO-01A","8:TG:133134891:+:2:RPL37A:216498867:+:fusion","TG--RPL37A",3.0,0.0,8.0,0.0,0.529,false,0.0121107266436]
["TCGA-THCA","TCGA-EM-A4FV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.712,true,"NA"]
["TCGA-THCA","TCGA-ET-A25L-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.895,true,"NA"]
["TCGA-THCA","TCGA-ET-A2MY-01A","8:TG:133030023:+:12:KDM5A:286207:-:fusion","TG--KDM5A",3.0,0.0,1.0,0.0,0.188,false,0.0395256916996]
["TCGA-THCA","TCGA-ET-A2N0-01A","17:ACSF2:50471135:XYLT2:50359969:rev:+","ACSF2--XYLT2",1.0,0.0,1.0,0.0,0.838,false,"NA"]
["TCGA-THCA","TCGA-ET-A39K-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",53.0,210.0,4870.0,17.0,0.765810879866818,false,"NA"]
["TCGA-THCA","TCGA-ET-A39K-01A","8:CTSB:11845082:-:17:AC087289.2:75899808:+:fusion","CTSB--AC087289.2",2.0,0.0,1.0,0.0,0.381,false,0.0078125]
["TCGA-THCA","TCGA-ET-A3BP-01A","1:AP4B1:113904605:CSDE1:114718745:rev:-","AP4B1--CSDE1",3.0,11.0,17.0,4.0,0.983,true,"NA"]
["TCGA-THCA","TCGA-ET-A3BS-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",4.0,2052.0,512.0,403.0,0.491,true,"NA"]
["TCGA-THCA","TCGA-ET-A3BW-01A","1:BSDC1:32368025:-:1:PLPP3:56496676:-:rev","BSDC1--PLPP3",2.0,0.0,1.0,0.0,0.4,false,0.0135593220339]
["TCGA-THCA","TCGA-ET-A3DQ-01A","13:RB1:48307406:ITM2B:48253808:rev:+","RB1--ITM2B",1.0,47.0,97.0,28.0,0.99,false,"NA"]
["TCGA-THCA","TCGA-ET-A3DT-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.735,true,"NA"]
["TCGA-THCA","TCGA-ET-A40Q-01A","17:PIK3R5:8965596:STX8:9378653:rev:-","PIK3R5--STX8",1.0,0.0,1.0,0.0,0.968,false,"NA"]
["TCGA-THCA","TCGA-ET-A40S-01A","1:MUC1:155185830:GON4L:155784389:rev:-","MUC1--GON4L",6.0,2011.0,360.0,280.0,0.608,true,"NA"]
["TCGA-THCA","TCGA-ET-A4KQ-01A","19:BSG:582582:+:15:USP3-AS1:63600739:-:fusion","BSG--USP3-AS1",3.0,0.0,1.0,0.0,0.318,false,0.0379310344828]
["TCGA-THCA","TCGA-ET-A4KQ-01A","8:CTSB:11844015:-:15:RMDN3:40737726:-:fusion","CTSB--RMDN3",2.0,0.0,1.0,0.0,0.268,false,0.048275862069]
["TCGA-THCA","TCGA-ET-A4KQ-01A","9:SMARCA2:2056845:+:19:SMARCA4:10994828:+:fusion","SMARCA2--SMARCA4",11.0,769.0,3.0,3.0,0.325,true,0.0213523131673]
["TCGA-THCA","TCGA-FE-A231-01A","8:CTSB:11849084:-:20:SLC9A8:49887829:+:fusion","CTSB--SLC9A8",2.0,0.0,1.0,0.0,0.227,false,0.0231958762887]
["TCGA-THCA","TCGA-FE-A239-01A","8:GTF2E2:30635032:PPP2CB:30799755:rev:-","GTF2E2--PPP2CB",1.0,0.0,5.0,0.0,0.923,false,"NA"]
["TCGA-THCA","TCGA-FE-A3PA-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",8.0,0.0,495.0,0.0,0.428,false,"NA"]
["TCGA-THCA","TCGA-FK-A3SB-01A","8:ST3GAL1:133571693:-:8:TG:133131812:+:strandcross","ST3GAL1--TG",1.0,1.0,4.0,0.0,0.72,false,0.0064308681672]
["TCGA-THCA","TCGA-FK-A3SH-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",15.0,0.0,1758.0,0.0,0.423,false,"NA"]
["TCGA-THCA","TCGA-FY-A3NM-01A","19:CNN2:1037000:+:1:NME7:169132817:-:fusion","CNN2--NME7",1.0,563.0,5.0,2.0,0.938,false,0.0]
["TCGA-THCA","TCGA-FY-A3NP-01A","8:TG:132888568:+:8:RPL7:73291661:-:strandcross","TG--RPL7",2.0,0.0,1.0,0.0,0.209,false,0.036303630363]
["TCGA-THCA","TCGA-FY-A3R6-01A","18:DYM:49417935:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,411.0,151.0,68.0,0.832,false,"NA"]
["TCGA-THCA","TCGA-FY-A3W9-01A","8:TG:133030023:+:3:ZBTB38:141446894:+:fusion","TG--ZBTB38",3.0,0.0,3.0,0.0,0.349,false,0.0175879396985]
["TCGA-THCA","TCGA-FY-A40M-01A","6:HCG25:33250711:+:9:DPP7:137112230:-:fusion","HCG25--DPP7",1.0,0.0,1.0,0.0,0.968,false,0.00263852242744]
["TCGA-THCA","TCGA-GE-A2C6-01A","9:C9orf3:95080780:AL158152.2:94200486:rev:+","C9orf3--AL158152.2",2.0,0.0,1.0,0.0,0.714,false,"NA"]
["TCGA-THCA","TCGA-H2-A26U-01A","2:CALM2:47160172:-:2:PCBP1-AS1:70086151:-:rev","CALM2--PCBP1-AS1",7.0,0.0,1.0,0.0,0.169,false,0.0323709536308]
["TCGA-THCA","TCGA-H2-A421-01A","7:TAX1BP1:27740269:+:7:HIBADH:27632441:-:strandcross","TAX1BP1--HIBADH",1.0,0.0,1.0,0.0,0.946,false,0.00286532951289]
["TCGA-THCA","TCGA-IM-A3EB-01A","15:SNX22:64155833:+:11:MPZL2:118264273:-:fusion","SNX22--MPZL2",3.0,0.0,1.0,0.0,0.167,false,0.0405982905983]
["TCGA-THCA","TCGA-IM-A3U3-01A","7:ACTB:5540676:PMS2:5999275:rev:-","ACTB--PMS2",1.0,131.0,41.0,14.0,0.821,false,"NA"]
["TCGA-THCA","TCGA-J8-A3O2-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.486604338245017,false,"NA"]
["TCGA-THCA","TCGA-J8-A3YH-01A","8:CLU:27608937:-:12:MYL6B:56152590:+:fusion","CLU--MYL6B",2.0,0.0,9.0,0.0,0.203,false,0.0258064516129]
["TCGA-THCA","TCGA-KS-A41F-01A","17:TMEM107:8173999:MYH10:8493898:rev:-","TMEM107--MYH10",3.0,0.0,1.0,0.0,0.465,false,"NA"]
["TCGA-THCA","TCGA-KS-A41I-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.616,true,"NA"]
["TCGA-THCA","TCGA-KS-A41L-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",5.0,0.0,205.0,0.0,0.251,false,0.00653594771242]
["TCGA-THCA","TCGA-KS-A4IC-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.618,true,"NA"]
["TCGA-THCA","TCGA-L6-A4EU-01A","22:TOM1:35347973:+:22:PITPNB:27858509:-:strandcross","TOM1--PITPNB",3.0,0.0,2.0,0.0,0.151,false,0.022792022792]
["TCGA-THCA","TCGA-MK-A4N9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",12.0,9462.0,7336.0,7317.0,0.849,true,"NA"]
["TCGA-THYM","TCGA-3S-AAYX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",19.0,9462.0,7336.0,7317.0,0.865956614212201,true,"NA"]
["TCGA-THYM","TCGA-4V-A9QJ-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",6.0,0.0,423.0,0.0,0.405,false,"NA"]
["TCGA-THYM","TCGA-4V-A9QW-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",5.0,5352.0,117.0,117.0,0.564,true,"NA"]
["TCGA-THYM","TCGA-4X-A9F9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",20.0,9462.0,7336.0,7317.0,0.89873213829577,true,"NA"]
["TCGA-THYM","TCGA-5G-A9ZZ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",4.0,210.0,4870.0,17.0,0.444,false,"NA"]
["TCGA-THYM","TCGA-5V-A9RR-01A","6:MDC1:30699807:FLOT1:30740853:rev:-","MDC1--FLOT1",2.0,1217.0,58.0,53.0,0.564,true,"NA"]
["TCGA-THYM","TCGA-X7-A8DE-01A","8:UBE2V2:48050508:MCM4:47969798:rev:+","UBE2V2--MCM4",1.0,2406.0,1.0,1.0,0.825,true,"NA"]
["TCGA-THYM","TCGA-X7-A8M1-01A","15:AC124312.1:24982437:SNURF:24962114:rev:+","AC124312.1--SNURF",1.0,19.0,48.0,10.0,0.969,false,"NA"]
["TCGA-THYM","TCGA-X7-A8M5-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.592,true,"NA"]
["TCGA-THYM","TCGA-XM-A8RB-01A","2:ITM2C:230879248:+:2:PCBP1-AS1:70087343:-:strandcross","ITM2C--PCBP1-AS1",3.0,0.0,12.0,0.0,0.155,false,0.0205479452055]
["TCGA-THYM","TCGA-XM-A8RF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",22.0,9462.0,7336.0,7317.0,0.892026803370823,true,"NA"]
["TCGA-THYM","TCGA-XU-A92Q-01A","1:FNBP1L:93448305:DR1:93353908:rev:+","FNBP1L--DR1",1.0,1.0,4.0,1.0,0.975,false,"NA"]
["TCGA-THYM","TCGA-XU-A92W-01A","17:PSMB3:38764225:+:17:PRPF8:1654980:-:strandcross","PSMB3--PRPF8",4.0,188.0,1.0,0.0,0.208,false,0.00851063829787]
["TCGA-THYM","TCGA-XU-A932-01A","8:RPL8:144790355:-:2:STK25:241497687:-:fusion","RPL8--STK25",2.0,0.0,2.0,0.0,0.163,false,0.0214067278287]
["TCGA-THYM","TCGA-XU-A936-01A","19:MAMSTR:48718974:-:14:IGHG1:105741795:-:fusion","MAMSTR--IGHG1",2.0,0.0,1.0,0.0,0.304,false,0.0273109243697]
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["TCGA-UCEC","TCGA-B5-A5OE-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",6.0,2722.0,255.0,144.0,0.715,true,"NA"]
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["TCGA-UCEC","TCGA-D1-A3DG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.824185475347671,false,"NA"]
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["TCGA-UCEC","TCGA-DF-A2KZ-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",16.0,0.0,1126.0,0.0,0.600482133854763,false,"NA"]
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["TCGA-UCEC","TCGA-EO-A1Y7-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.925,true,"NA"]
["TCGA-UCEC","TCGA-EO-A3AV-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",22.0,0.0,1126.0,0.0,0.789923604891411,false,"NA"]
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["TCGA-UCEC","TCGA-EO-A3AY-01A","7:DBNL:44061716:+:12:EEA1:92801701:-:fusion","DBNL--EEA1",4.0,0.0,2.0,0.0,0.265,false,0.0223214285714]
["TCGA-UCEC","TCGA-EO-A3AZ-01A","17:JPT1:75135248:UNC13D:75841156:rev:-","JPT1--UNC13D",11.0,2732.0,181.0,181.0,0.909,true,"NA"]
["TCGA-UCEC","TCGA-EO-A3AZ-01A","7:STAG3:100180895:+:19:AC005523.2:4795555:-:fusion","STAG3--AC005523.2",2.0,402.0,30.0,19.0,0.479,true,0.0]
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["TCGA-UCEC","TCGA-EY-A210-01A","13:ARGLU1:106543828:-:1:EPS8L3:109763904:-:fusion","ARGLU1--EPS8L3",4.0,0.0,297.0,0.0,0.282,false,0.0147275405007]
["TCGA-UCEC","TCGA-EY-A3L3-01A","5:HSPA9:138555360:-:19:AC092069.1:12944487:-:fusion","HSPA9--AC092069.1",2.0,691.0,10.0,1.0,0.217,false,0.0242424242424]
["TCGA-UCEC","TCGA-EY-A4KR-01A","1:MTR:236900418:+:10:CCAR1:68721144:+:fusion","MTR--CCAR1",3.0,0.0,1.0,0.0,0.167,false,0.020942408377]
["TCGA-UCEC","TCGA-FI-A3PV-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.408,false,"NA"]
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["TCGA-UCEC","TCGA-H5-A2HR-01A","1:FAM189B:155247205:GON4L:155784389:rev:-","FAM189B--GON4L",8.0,821.0,85.0,71.0,0.703,false,"NA"]
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["TCGA-UCEC","TCGA-PG-A5BC-01A","3:SLC25A36:140976650:+:16:ZFHX3:72798714:-:fusion","SLC25A36--ZFHX3",6.0,3.0,1.0,0.0,0.243,false,0.0353982300885]
["TCGA-UCEC","TCGA-PG-A914-01A","1:NDUFS2:161214296:+:19:ATP1A3:41993467:-:fusion","NDUFS2--ATP1A3",3.0,42.0,28.0,0.0,0.671,false,0.0]
["TCGA-UCEC","TCGA-QF-A5YS-01A","2:KDM3A:86491057:+:11:MMP7:102527983:-:fusion","KDM3A--MMP7",2.0,0.0,1.0,0.0,0.514,false,0.00286123032904]
["TCGA-UCEC","TCGA-QS-A8F1-01A","19:NDUFA11:5894677:DENND1C:6477588:rev:-","NDUFA11--DENND1C",19.0,0.0,495.0,0.0,0.629592854333869,false,"NA"]
["TCGA-UCEC","TCGA-SL-A6JA-01A","21:TFF3:42312074:CBS:43055901:rev:-","TFF3--CBS",78.0,1.0,1034.0,1.0,0.711347978574169,false,"NA"]
["TCGA-UCS","TCGA-N5-A4RJ-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.595,false,"NA"]
["TCGA-UCS","TCGA-N5-A4RN-01A","12:PCBP2:53479683:+:1:AL513523.10:153774079:-:fusion","PCBP2--AL513523.10",3.0,235.0,2.0,0.0,0.449,false,0.00896860986547]
["TCGA-UCS","TCGA-N5-A4RO-01A","22:CECR2:17369909:+:22:DGCR2:19089490:-:strandcross","CECR2--DGCR2",3.0,0.0,1.0,0.0,0.88,false,0.00645161290323]
["TCGA-UCS","TCGA-N5-A59E-01A","12:HIP1R:122848094:+:19:UBL5:9828592:+:fusion","HIP1R--UBL5",2.0,1.0,2.0,1.0,0.568,false,0.00238095238095]
["TCGA-UCS","TCGA-N6-A4VC-01A","12:CD63:55725470:-:12:IL23A:56338875:+:strandcross","CD63--IL23A",5.0,0.0,4.0,0.0,0.19,false,0.0343642611684]
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["TCGA-UCS","TCGA-N8-A4PN-01A","17:MYO18A:29131383:-:17:ACTG1:81511626:-:rev","MYO18A--ACTG1",1.0,13.0,9.0,4.0,0.836,false,0.00571428571429]
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["TCGA-UCS","TCGA-NA-A4QV-01A","2:ABCB6:219218125:-:7:COL1A2:94427188:+:fusion","ABCB6--COL1A2",3.0,1.0,1.0,0.0,0.401,false,0.0143266475645]
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["TCGA-UCS","TCGA-QM-A5NM-01A","12:MYL6:56161574:+:19:RPS9:54206553:+:fusion","MYL6--RPS9",2.0,0.0,1.0,0.0,0.154,false,0.031746031746]
["TCGA-UCS","TCGA-QM-A5NM-01A","16:PPP4C:30085371:+:4:ASIC5:155866273:-:fusion","PPP4C--ASIC5",3.0,0.0,1.0,0.0,0.272,false,0.00907029478458]
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["TCGA-UCS","TCGA-QN-A5NN-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",9.0,9462.0,7336.0,7317.0,0.647,true,"NA"]
["TCGA-UCS","TCGA-QN-A5NN-01A","4:BMP2K:78776721:MRPL1:77949797:rev:+","BMP2K--MRPL1",2.0,0.0,5.0,0.0,0.647,false,"NA"]
["TCGA-UCS","TCGA-QN-A5NN-01A","8:AC011632.1:74866865:CASC9:75224358:rev:-","AC011632.1--CASC9",1.0,298.0,112.0,87.0,0.855,false,"NA"]
["TCGA-UCS","TCGA-QN-A5NN-01A","10:OGDHL:49734643:-:10:POLR3A:77986159:-:rev","OGDHL--POLR3A",2.0,0.0,1.0,0.0,0.166,false,0.016694490818]
["TCGA-UCS","TCGA-QN-A5NN-01A","11:CD81:2395520:+:17:ARHGDIA:81867919:-:fusion","CD81--ARHGDIA",4.0,0.0,2.0,0.0,0.165,false,0.016694490818]
["TCGA-UCS","TCGA-QN-A5NN-01A","11:CFL1:65855009:-:17:TOB1:50863960:-:fusion","CFL1--TOB1",3.0,0.0,1.0,0.0,0.179,false,0.0133555926544]
["TCGA-UCS","TCGA-QN-A5NN-01A","11:SF1:64776498:-:16:FUS:31188325:+:fusion","SF1--FUS",3.0,32.0,17.0,6.0,0.779,false,0.0]
["TCGA-UCS","TCGA-QN-A5NN-01A","13:COL4A1:110306944:-:13:COL4A2:110424734:+:strandcross","COL4A1--COL4A2",1.0,13.0,47.0,11.0,0.81,false,0.0]
["TCGA-UCS","TCGA-QN-A5NN-01A","14:PSME1:24138959:+:7:ZNHIT1:101223477:+:fusion","PSME1--ZNHIT1",2.0,0.0,1.0,0.0,0.151,false,0.0183639398998]
["TCGA-UCS","TCGA-QN-A5NN-01A","17:ACTG1:81510005:-:2:RAPGEF4:173030164:+:fusion","ACTG1--RAPGEF4",2.0,0.0,1.0,0.0,0.216,false,0.0116861435726]
["TCGA-UCS","TCGA-QN-A5NN-01A","17:COL1A1:50192640:-:7:COL1A2:94412584:+:fusion","COL1A1--COL1A2",3.0,1.0,1.0,0.0,0.209,false,0.00903614457831]
["TCGA-UCS","TCGA-QN-A5NN-01A","17:EIF1:41689941:+:7:AC000111.3:117487737:+:fusion","EIF1--AC000111.3",2.0,0.0,1.0,0.0,0.228,false,0.0100166944908]
["TCGA-UCS","TCGA-QN-A5NN-01A","19:JUND:18279760:-:14:OXA1L:22771268:+:fusion","JUND--OXA1L",3.0,0.0,1.0,0.0,0.179,false,0.0133555926544]
["TCGA-UCS","TCGA-QN-A5NN-01A","19:PTBP1:812312:+:13:ITM2B:48262571:+:fusion","PTBP1--ITM2B",2.0,0.0,1.0,0.0,0.151,false,0.0183639398998]
["TCGA-UCS","TCGA-QN-A5NN-01A","1:C1orf122:37809449:+:1:AL445490.1:27669907:+:rev","C1orf122--AL445490.1",6.0,0.0,1.0,0.0,0.226,false,0.0100166944908]
["TCGA-UCS","TCGA-QN-A5NN-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",2.0,2010.0,1976.0,1665.0,0.991,false,0.0]
["TCGA-UCS","TCGA-QN-A5NN-01A","3:AP2M1:184179122:+:20:BMP7:57183919:-:fusion","AP2M1--BMP7",2.0,0.0,1.0,0.0,0.515,false,0.0016694490818]
["TCGA-UCS","TCGA-QN-A5NN-01A","5:ARL15:54113202:-:5:NDUFS4:53646233:+:strandcross","ARL15--NDUFS4",2.0,39.0,5.0,2.0,0.457,true,0.0016694490818]
["TCGA-UCS","TCGA-QN-A5NN-01A","6:UBR2:42676191:+:6:XPO5:43547707:-:strandcross","UBR2--XPO5",5.0,0.0,3.0,0.0,0.173,false,0.0180722891566]
["TCGA-UCS","TCGA-QN-A5NN-01A","7:COL1A2:94428477:+:2:SNRNP200:96277241:-:fusion","COL1A2--SNRNP200",3.0,0.0,1.0,0.0,0.205,false,0.0116861435726]
["TCGA-UCS","TCGA-QN-A5NN-01A","8:WDYHV1:123442021:+:17:NME2:51168019:+:fusion","WDYHV1--NME2",3.0,0.0,1.0,0.0,0.156,false,0.016694490818]
["TCGA-UCS","TCGA-QN-A5NN-01A","X:SAT1:23786210:+:X:VEGFD:15384376:-:strandcross","SAT1--VEGFD",2.0,0.0,1.0,0.0,0.257,false,0.00834724540902]
["TCGA-UCS","TCGA-QN-A5NN-01A","X:TSPYL2:53088540:+:19:MOB3A:2073424:-:fusion","TSPYL2--MOB3A",5.0,0.0,1.0,0.0,0.182,false,0.0133555926544]
["TCGA-UVM","TCGA-RZ-AB0B-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.477,true,"NA"]
["TCGA-UVM","TCGA-RZ-AB0B-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.435,false,"NA"]
["TCGA-UVM","TCGA-RZ-AB0B-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.47,true,"NA"]
["TCGA-UVM","TCGA-RZ-AB0B-01A","6:IGF2R:160027314:MRPL18:159797287:rev:+","IGF2R--MRPL18",1.0,0.0,1.0,0.0,0.812,false,"NA"]
["TCGA-UVM","TCGA-RZ-AB0B-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.523,false,"NA"]
["TCGA-UVM","TCGA-RZ-AB0B-01A","19:SMARCA4:10983711:+:17:MYO1D:32780784:-:fusion","SMARCA4--MYO1D",3.0,96.0,30.0,1.0,0.603,false,0.0]
["TCGA-UVM","TCGA-RZ-AB0B-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",11.0,0.0,192.0,0.0,0.338,false,0.034632034632]
["TCGA-UVM","TCGA-V3-A9ZX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.952,true,"NA"]
["TCGA-UVM","TCGA-V3-A9ZX-01A","6:HLA-DRB5:32530125:HLA-DRB1:32584378:rev:-","HLA-DRB5--HLA-DRB1",2.0,3135.0,4.0,4.0,0.425,true,"NA"]
["TCGA-UVM","TCGA-V3-A9ZX-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.456,false,0.0078125]
["TCGA-UVM","TCGA-V3-A9ZX-01A","18:CABLES1:23253936:+:7:STARD3NL:38201714:+:fusion","CABLES1--STARD3NL",5.0,0.0,1.0,0.0,0.227,false,0.0234375]
["TCGA-UVM","TCGA-V3-A9ZX-01A","19:RPS19:41869087:+:19:RAB11B:8403413:+:rev","RPS19--RAB11B",2.0,0.0,25.0,0.0,0.375,false,0.0252100840336]
["TCGA-UVM","TCGA-V3-A9ZX-01A","19:UBA52:18572607:+:20:CTSZ:58997753:-:fusion","UBA52--CTSZ",2.0,2695.0,3.0,3.0,0.181,true,0.0378151260504]
["TCGA-UVM","TCGA-V3-A9ZX-01A","7:ARPC1B:99388956:+:8:RPS20:56074498:-:fusion","ARPC1B--RPS20",4.0,8866.0,9.0,8.0,0.207,true,0.0336134453782]
["TCGA-UVM","TCGA-V3-A9ZY-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",1.0,9462.0,7336.0,7317.0,0.92,true,"NA"]
["TCGA-UVM","TCGA-V3-A9ZY-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",2.0,402.0,251.0,118.0,0.998,true,"NA"]
["TCGA-UVM","TCGA-V3-A9ZY-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.597,false,"NA"]
["TCGA-UVM","TCGA-V3-A9ZY-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.151,false,0.0272727272727]
["TCGA-UVM","TCGA-V3-A9ZY-01A","5:RACK1:181238099:-:2:TMEM214:27039047:+:fusion","RACK1--TMEM214",8.0,0.0,1.0,0.0,0.18,false,0.0341463414634]
["TCGA-UVM","TCGA-V4-A9E5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.549,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E7-01A","17:HEXDC:82428127:TSPAN10:81644992:rev:+","HEXDC--TSPAN10",1.0,127.0,2.0,2.0,0.83,true,"NA"]
["TCGA-UVM","TCGA-V4-A9E7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.598,true,"NA"]
["TCGA-UVM","TCGA-V4-A9E7-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",1.0,2010.0,1976.0,1665.0,0.969,false,0.0]
["TCGA-UVM","TCGA-V4-A9E8-01A","17:SAT2:7626234:MYH10:8493898:rev:-","SAT2--MYH10",2.0,0.0,15.0,0.0,0.401,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.466,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E8-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.302,false,0.00613496932515]
["TCGA-UVM","TCGA-V4-A9E8-01A","19:ACTN4:38730144:+:4:HSD17B13:87315599:-:fusion","ACTN4--HSD17B13",6.0,0.0,16.0,0.0,0.216,false,0.00425531914894]
["TCGA-UVM","TCGA-V4-A9E8-01A","1:ENO1:8866279:-:1:LRRC41:46281385:-:rev","ENO1--LRRC41",2.0,0.0,1.0,0.0,0.385,false,0.00212765957447]
["TCGA-UVM","TCGA-V4-A9E8-01A","20:GNAS:58909804:+:12:PMEL:55957059:-:fusion","GNAS--PMEL",2.0,0.0,3.0,0.0,0.208,false,0.00425531914894]
["TCGA-UVM","TCGA-V4-A9E8-01A","2:MGAT5:134454621:+:19:MOB3A:2073424:-:fusion","MGAT5--MOB3A",5.0,0.0,1.0,0.0,0.177,false,0.0127659574468]
["TCGA-UVM","TCGA-V4-A9E9-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",7.0,726.0,603.0,54.0,0.494,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E9-01A","17:TP53:7668421:MYH10:8493898:rev:-","TP53--MYH10",3.0,0.0,55.0,0.0,0.428,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E9-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,1126.0,0.0,0.551,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E9-01A","6:WDR27:169701551:PSMB1:170549113:rev:-","WDR27--PSMB1",1.0,3.0,6.0,2.0,0.848,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E9-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.608,false,"NA"]
["TCGA-UVM","TCGA-V4-A9E9-01A","1:PRCC:156800771:+:8:AP003352.1:98041726:+:fusion","PRCC--AP003352.1",13.0,2533.0,1.0,0.0,0.171,false,0.0210970464135]
["TCGA-UVM","TCGA-V4-A9EC-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.444,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EC-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",9.0,7.0,180.0,0.0,0.492,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EC-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.691,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ED-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",7.0,0.0,423.0,0.0,0.502,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ED-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.661,true,"NA"]
["TCGA-UVM","TCGA-V4-A9ED-01A","2:RMND5A:86753558:MRPL35:86210480:rev:+","RMND5A--MRPL35",1.0,0.0,1.0,0.0,0.944,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ED-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.79,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ED-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.187,false,0.0184049079755]
["TCGA-UVM","TCGA-V4-A9ED-01A","1:PRDX1:45511051:-:2:PCBP1-AS1:70087343:-:fusion","PRDX1--PCBP1-AS1",8.0,70.0,33.0,0.0,0.206,false,0.0122448979592]
["TCGA-UVM","TCGA-V4-A9ED-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",10.0,0.0,192.0,0.0,0.203,false,0.0122448979592]
["TCGA-UVM","TCGA-V4-A9EE-01A","12:MAPKAPK5:111871180:ACAD10:111744643:rev:+","MAPKAPK5--ACAD10",12.0,30.0,18.0,18.0,0.605,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.483,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","16:MT2A:56609057:MT3:56590840:rev:+","MT2A--MT3",1.0,9533.0,41.0,41.0,0.965,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.796,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","X:F8:154886134:CLIC2:155299145:rev:-","F8--CLIC2",4.0,402.0,251.0,118.0,0.966,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.733,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EE-01A","21:S100B:46598962:-:12:TCTN1:110644708:+:fusion","S100B--TCTN1",6.0,0.0,29.0,0.0,0.155,false,0.03125]
["TCGA-UVM","TCGA-V4-A9EF-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.874,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",7.0,0.0,423.0,0.0,0.437,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.439,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.602,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","1:SCAMP3:155255981:GON4L:155784389:rev:-","SCAMP3--GON4L",6.0,3449.0,231.0,225.0,0.414,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.889,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.683,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EF-01A","17:HEXDC:82428127:+:14:CHD8:21386176:-:fusion","HEXDC--CHD8",1.0,1308.0,31.0,16.0,0.756,false,0.00687285223368]
["TCGA-UVM","TCGA-V4-A9EF-01A","19:EEF2:3977819:-:22:UQCR10:29767374:+:fusion","EEF2--UQCR10",3.0,0.0,3.0,0.0,0.198,false,0.020618556701]
["TCGA-UVM","TCGA-V4-A9EF-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",11.0,0.0,225.0,0.0,0.278,false,0.0137457044674]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:AKT2:40232335:C19orf47:40343805:rev:-","AKT2--C19orf47",3.0,0.0,47.0,0.0,0.419,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.511,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:C19orf70:5678421:DENND1C:6477588:rev:-","C19orf70--DENND1C",5.0,0.0,31.0,0.0,0.494,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",4.0,2909.0,156.0,153.0,0.481,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.493,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.491,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.576,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.623,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EH-01A","10:VIM:17229870:+:22:COMT:19950942:+:fusion","VIM--COMT",6.0,0.0,2.0,0.0,0.726,false,0.0]
["TCGA-UVM","TCGA-V4-A9EH-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.296,true,0.0093896713615]
["TCGA-UVM","TCGA-V4-A9EH-01A","12:PMEL:55957186:-:11:KLHL35:75423880:-:fusion","PMEL--KLHL35",4.0,0.0,2.0,0.0,0.297,false,0.0093896713615]
["TCGA-UVM","TCGA-V4-A9EH-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",1.0,1067.0,394.0,191.0,0.912,false,0.0]
["TCGA-UVM","TCGA-V4-A9EH-01A","16:CREBBP:3850297:-:5:ATG10:82178490:+:fusion","CREBBP--ATG10",4.0,0.0,25.0,0.0,0.166,false,0.0188679245283]
["TCGA-UVM","TCGA-V4-A9EH-01A","1:IFI6:27668226:-:20:CTSZ:59007230:-:fusion","IFI6--CTSZ",4.0,0.0,1.0,0.0,0.287,false,0.0117370892019]
["TCGA-UVM","TCGA-V4-A9EI-01A","2:PAX3:222294167:FARSB:222600083:rev:-","PAX3--FARSB",1.0,1.0,2.0,0.0,0.971,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EI-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",6.0,0.0,1499.0,0.0,0.325,false,0.0147783251232]
["TCGA-UVM","TCGA-V4-A9EI-01A","11:LDHA:18407847:+:2:ATP5G3:175184607:-:fusion","LDHA--ATP5G3",4.0,0.0,98.0,0.0,0.152,false,0.0246305418719]
["TCGA-UVM","TCGA-V4-A9EI-01A","12:CDK4:57749182:-:8:RPL30:98045399:-:fusion","CDK4--RPL30",4.0,0.0,1.0,0.0,0.185,false,0.00898203592814]
["TCGA-UVM","TCGA-V4-A9EI-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",3.0,2010.0,1976.0,1665.0,0.646,false,0.00898203592814]
["TCGA-UVM","TCGA-V4-A9EI-01A","8:RPL8:144789766:-:19:NR2C2AP:19202844:-:fusion","RPL8--NR2C2AP",3.0,0.0,1.0,0.0,0.315,false,0.00898203592814]
["TCGA-UVM","TCGA-V4-A9EJ-01A","17:HEXDC:82428127:TSPAN10:81644992:rev:+","HEXDC--TSPAN10",1.0,127.0,2.0,2.0,0.903,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EJ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.854,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EJ-01A","7:C7orf26:6602140:AIMP2:6023303:rev:+","C7orf26--AIMP2",1.0,0.0,1.0,0.0,0.866,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EJ-01A","7:TTYH3:2653010:EIF3B:2376950:rev:+","TTYH3--EIF3B",1.0,0.0,1.0,0.0,0.942,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EJ-01A","8:CHD7:60679082:RAB2A:60558852:rev:+","CHD7--RAB2A",1.0,7.0,6.0,3.0,0.873,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EK-01A","13:ATP11A:112842379:LINC00403:112107712:rev:+","ATP11A--LINC00403",3.0,0.0,1.0,0.0,0.467,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EK-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",3.0,0.0,1758.0,0.0,0.479,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.972,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EK-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.629,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EK-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",10.0,0.0,1499.0,0.0,0.358,false,0.0077519379845]
["TCGA-UVM","TCGA-V4-A9EK-01A","12:MBD6:57524822:+:12:FAR2:29332600:+:rev","MBD6--FAR2",7.0,1.0,1.0,0.0,0.342,false,0.025641025641]
["TCGA-UVM","TCGA-V4-A9EK-01A","1:CSDE1:114717312:-:2:CLASP1:121460125:-:fusion","CSDE1--CLASP1",12.0,0.0,9.0,0.0,0.226,false,0.0232558139535]
["TCGA-UVM","TCGA-V4-A9EK-01A","1:ENO1:8865285:-:11:TKFC:61339254:+:fusion","ENO1--TKFC",4.0,0.0,1.0,0.0,0.164,false,0.0512820512821]
["TCGA-UVM","TCGA-V4-A9EK-01A","2:PARD3B:204546171:+:2:SLC40A1:189583420:-:strandcross","PARD3B--SLC40A1",1.0,0.0,1.0,0.0,0.885,false,0.0128205128205]
["TCGA-UVM","TCGA-V4-A9EK-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",4.0,4574.0,830.0,638.0,0.447,false,0.025641025641]
["TCGA-UVM","TCGA-V4-A9EL-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",2.0,0.0,1758.0,0.0,0.438,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EL-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.87,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EL-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.706,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EL-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",5.0,0.0,1499.0,0.0,0.272,false,0.0103626943005]
["TCGA-UVM","TCGA-V4-A9EL-01A","14:PLEKHH1:67589533:+:15:BNIP2:59678016:-:fusion","PLEKHH1--BNIP2",4.0,0.0,2.0,0.0,0.156,false,0.0315789473684]
["TCGA-UVM","TCGA-V4-A9EL-01A","17:ERBB2:39713269:+:8:PVT1:128009590:+:fusion","ERBB2--PVT1",4.0,1149.0,78.0,36.0,0.163,true,0.020725388601]
["TCGA-UVM","TCGA-V4-A9EL-01A","1:FAM213B:2591463:+:8:UQCRB:96231621:-:fusion","FAM213B--UQCRB",6.0,0.0,1.0,0.0,0.183,false,0.0315789473684]
["TCGA-UVM","TCGA-V4-A9EL-01A","1:GUK1:228147487:+:16:RPS2:1962265:-:fusion","GUK1--RPS2",1.0,0.0,1.0,0.0,0.776,false,0.00526315789474]
["TCGA-UVM","TCGA-V4-A9EL-01A","1:SNHG3:28508160:+:7:MAD1L1:1936897:-:fusion","SNHG3--MAD1L1",1.0,0.0,1.0,0.0,0.983,false,0.0]
["TCGA-UVM","TCGA-V4-A9EL-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",4.0,4574.0,830.0,638.0,0.249,true,0.0289473684211]
["TCGA-UVM","TCGA-V4-A9EL-01A","8:TSTA3:143612621:-:17:SLC38A10:81246240:-:fusion","TSTA3--SLC38A10",4.0,0.0,1.0,0.0,0.179,false,0.0315789473684]
["TCGA-UVM","TCGA-V4-A9EM-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.58,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EM-01A","6:BTN3A3:26450133:BTN3A1:26412412:rev:+","BTN3A3--BTN3A1",1.0,2659.0,122.0,88.0,0.866,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EM-01A","7:GTF2IRD1:74591017:EIF4H:74187611:rev:+","GTF2IRD1--EIF4H",1.0,0.0,1.0,0.0,0.817,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",14.0,210.0,4870.0,17.0,0.74,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EM-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",10.0,0.0,1499.0,0.0,0.216,false,0.012987012987]
["TCGA-UVM","TCGA-V4-A9EM-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",5.0,2010.0,1976.0,1665.0,0.192,true,0.0322580645161]
["TCGA-UVM","TCGA-V4-A9EO-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.436,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EO-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.456,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EQ-01A","19:ECH1:38815422:FBXO27:39024242:rev:-","ECH1--FBXO27",3.0,2722.0,255.0,144.0,0.402,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EQ-01A","2:ARPC2:218254123:+:1:CADM3:159193423:+:fusion","ARPC2--CADM3",9.0,0.0,225.0,0.0,0.338,false,0.00826446280992]
["TCGA-UVM","TCGA-V4-A9ES-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",10.0,9462.0,7336.0,7317.0,0.991,true,"NA"]
["TCGA-UVM","TCGA-V4-A9ES-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.637,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ES-01A","10:VIM:17229870:+:19:SGTA:2761522:-:fusion","VIM--SGTA",6.0,0.0,4.0,0.0,0.157,false,0.042904290429]
["TCGA-UVM","TCGA-V4-A9ES-01A","10:VIM:17235389:+:10:INA:103288360:+:reg","VIM--INA",2.0,0.0,1.0,0.0,0.18,false,0.029702970297]
["TCGA-UVM","TCGA-V4-A9ES-01A","20:AHCY:34293466:-:2:RPL37A:216498844:+:fusion","AHCY--RPL37A",2.0,279.0,1.0,1.0,0.318,true,0.023102310231]
["TCGA-UVM","TCGA-V4-A9ES-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",20.0,0.0,192.0,0.0,0.336732771134039,false,0.019801980198]
["TCGA-UVM","TCGA-V4-A9ES-01A","X:RPS4X:72275544:-:X:ARHGAP4:153932115:-:rev","RPS4X--ARHGAP4",3.0,0.0,4.0,0.0,0.199,false,0.029702970297]
["TCGA-UVM","TCGA-V4-A9ET-01A","12:ATF7:53507856:ATP5G2:53669341:rev:-","ATF7--ATP5G2",2.0,0.0,4.0,0.0,0.466,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","17:SLC25A19:75272981:UNC13D:75841156:rev:-","SLC25A19--UNC13D",2.0,512.0,33.0,31.0,0.402,true,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","18:PQLC1:79933969:TXNL4A:79973856:rev:-","PQLC1--TXNL4A",1.0,0.0,1.0,0.0,0.868,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",6.0,2909.0,156.0,153.0,0.495,true,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",11.0,0.0,1126.0,0.0,0.516,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.561,true,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.731,false,"NA"]
["TCGA-UVM","TCGA-V4-A9ET-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.476,true,0.0108108108108]
["TCGA-UVM","TCGA-V4-A9ET-01A","12:STX2:130821689:-:11:LRTOMT:72095694:+:fusion","STX2--LRTOMT",1.0,454.0,8.0,2.0,0.92,false,0.0]
["TCGA-UVM","TCGA-V4-A9EU-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.574,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EU-01A","15:OCA2:27926127:HERC2:28163285:rev:-","OCA2--HERC2",1.0,0.0,1.0,0.0,0.929,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EU-01A","1:PIGK:77122275:USP33:77746556:rev:-","PIGK--USP33",1.0,0.0,1.0,0.0,0.881,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EU-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.872,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EU-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.505,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","14:EAPP:34516012:PPP2R3C:35116737:rev:-","EAPP--PPP2R3C",2.0,0.0,148.0,0.0,0.406,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","16:MLST8:2207250:FAHD1:1838016:rev:+","MLST8--FAHD1",2.0,0.0,3.0,0.0,0.43,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",2.0,0.0,147.0,0.0,0.419,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.565,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","6:LTB:31582256:CLIC1:31734263:rev:-","LTB--CLIC1",1.0,0.0,1.0,0.0,0.86,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.569,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EV-01A","19:AC136469.1:8427702:-:20:CTSZ:58997753:-:fusion","AC136469.1--CTSZ",4.0,2676.0,112.0,69.0,0.317,true,0.0111111111111]
["TCGA-UVM","TCGA-V4-A9EV-01A","19:RPS19:41869214:+:8:RPL8:144792384:-:fusion","RPS19--RPL8",2.0,0.0,5.0,0.0,0.289,false,0.0111111111111]
["TCGA-UVM","TCGA-V4-A9EV-01A","5:CD74:150406259:-:15:RPLP1:69455428:+:fusion","CD74--RPLP1",1.0,8.0,1.0,0.0,0.802,false,0.00277777777778]
["TCGA-UVM","TCGA-V4-A9EV-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",11.0,4574.0,830.0,638.0,0.346,true,0.0111111111111]
["TCGA-UVM","TCGA-V4-A9EW-01A","15:AC124312.1:24982437:SNRPN:24967932:rev:+","AC124312.1--SNRPN",1.0,42.0,75.0,15.0,0.97,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EW-01A","1:C1orf43:154213182:-:20:CTSZ:58997753:-:fusion","C1orf43--CTSZ",2.0,1121.0,1.0,0.0,0.22,false,0.0243055555556]
["TCGA-UVM","TCGA-V4-A9EX-01A","17:NME1:51153662:NME1-NME2:51153590:rev:+","NME1--NME1-NME2",1.0,38.0,46.0,7.0,0.803,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.828,true,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","2:LTBP1:33134960:TTC27:32777882:rev:+","LTBP1--TTC27",1.0,0.0,1.0,0.0,0.803,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","7:TPST1:66286709:VKORC1L1:65948671:rev:+","TPST1--VKORC1L1",1.0,0.0,1.0,0.0,0.96,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","X:ASB11:15315425:PIR:15407550:rev:-","ASB11--PIR",1.0,0.0,1.0,0.0,0.911,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.549,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EX-01A","1:RCC1:28508905:+:2:ARMC9:231291353:+:fusion","RCC1--ARMC9",1.0,0.0,1.0,0.0,0.937,false,0.0036231884058]
["TCGA-UVM","TCGA-V4-A9EX-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",1.0,2010.0,1976.0,1665.0,0.819,false,0.00724637681159]
["TCGA-UVM","TCGA-V4-A9EX-01A","8:RPL8:144791277:-:19:RPS11:49497917:+:fusion","RPL8--RPS11",1.0,1.0,10.0,0.0,0.883,false,0.00724637681159]
["TCGA-UVM","TCGA-V4-A9EY-01A","7:URGCP:43910731:POLM:44076629:rev:-","URGCP--POLM",2.0,48.0,2.0,0.0,0.473,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EY-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.504,false,"NA"]
["TCGA-UVM","TCGA-V4-A9EY-01A","6:HLA-G:29829932:+:6:ZNRD1ASP:30009171:-:strandcross","HLA-G--ZNRD1ASP",1.0,0.0,1.0,0.0,0.877,false,0.00704225352113]
["TCGA-UVM","TCGA-V4-A9EZ-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",12.0,0.0,1499.0,0.0,0.186,false,0.0108695652174]
["TCGA-UVM","TCGA-V4-A9F0-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",3.0,726.0,603.0,54.0,0.537,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","17:CD300LF:74712824:JPT1:75147653:rev:-","CD300LF--JPT1",1.0,0.0,1.0,0.0,0.803,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.821,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.448,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","6:TRIM26:30184455:FLOT1:30740853:rev:-","TRIM26--FLOT1",2.0,5352.0,117.0,117.0,0.404,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.894,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F0-01A","10:VIM:17229870:+:17:PPP1R9B:50139581:-:fusion","VIM--PPP1R9B",8.0,0.0,22.0,0.0,0.682,false,0.0]
["TCGA-UVM","TCGA-V4-A9F0-01A","17:LRRC75A-AS1:16441738:+:17:ARHGDIA:81871337:-:strandcross","LRRC75A-AS1--ARHGDIA",2.0,0.0,2.0,0.0,0.461,false,0.0127795527157]
["TCGA-UVM","TCGA-V4-A9F0-01A","1:GJA4:34793068:+:1:SRRM1:24661310:+:rev","GJA4--SRRM1",2.0,0.0,1.0,0.0,0.475,false,0.0127795527157]
["TCGA-UVM","TCGA-V4-A9F0-01A","22:ZDHHC8:20139892:+:1:SSU72:1545002:-:fusion","ZDHHC8--SSU72",2.0,2.0,5.0,1.0,0.65,false,0.00319488817891]
["TCGA-UVM","TCGA-V4-A9F0-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",5.0,4574.0,830.0,638.0,0.232,true,0.0255591054313]
["TCGA-UVM","TCGA-V4-A9F0-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",5.0,0.0,192.0,0.0,0.215,false,0.0255591054313]
["TCGA-UVM","TCGA-V4-A9F0-01A","X:SLC25A6:1386152:-:19:AKT2:40235147:-:fusion","SLC25A6--AKT2",2.0,0.0,1.0,0.0,0.519,false,0.00958466453674]
["TCGA-UVM","TCGA-V4-A9F1-01A","10:INPP5A:132726905:PWWP2B:132417061:rev:+","INPP5A--PWWP2B",1.0,2.0,5.0,1.0,0.924,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F1-01A","17:PGS1:78378808:SEPT9:77482144:rev:+","PGS1--SEPT9",1.0,0.0,1.0,0.0,0.912,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F1-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",2.0,8342.0,621.0,613.0,0.635,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F1-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.968,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F1-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",11.0,0.0,1499.0,0.0,0.3,false,0.021978021978]
["TCGA-UVM","TCGA-V4-A9F2-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",5.0,2909.0,156.0,153.0,0.416,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F2-01A","2:PAX3:222294167:FARSB:222572022:rev:-","PAX3--FARSB",1.0,0.0,3.0,0.0,0.891,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F2-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.447,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F2-01A","11:SLC3A2:62888875:+:22:RNF215:30384834:-:fusion","SLC3A2--RNF215",8.0,0.0,1.0,0.0,0.164,false,0.0276243093923]
["TCGA-UVM","TCGA-V4-A9F2-01A","8:PLPBP:37766355:+:16:CHMP1A:89647331:-:fusion","PLPBP--CHMP1A",1.0,70.0,43.0,10.0,0.902,false,0.0]
["TCGA-UVM","TCGA-V4-A9F3-01A","17:DNAJC7:41976479:AARSD1:42955456:rev:-","DNAJC7--AARSD1",1.0,5861.0,13.0,12.0,0.873,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F3-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.875,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F3-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.43,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F3-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",3.0,0.0,205.0,0.0,0.239,false,0.00537634408602]
["TCGA-UVM","TCGA-V4-A9F3-01A","16:INO80E:30004657:+:12:CD63:55728352:-:fusion","INO80E--CD63",2.0,0.0,1.0,0.0,0.36,false,0.0216049382716]
["TCGA-UVM","TCGA-V4-A9F3-01A","1:NDUFS2:161214296:+:14:MAX:65102488:-:fusion","NDUFS2--MAX",3.0,10454.0,1.0,1.0,0.733,true,0.00925925925926]
["TCGA-UVM","TCGA-V4-A9F3-01A","1:NDUFS2:161214296:+:19:ATP1A3:41993467:-:fusion","NDUFS2--ATP1A3",3.0,42.0,28.0,0.0,0.733,false,0.0]
["TCGA-UVM","TCGA-V4-A9F4-01A","11:NAP1L4:2951259:CARS:3029443:rev:-","NAP1L4--CARS",1.0,0.0,2.0,0.0,0.845,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F4-01A","14:HAUS4:22955100:PSMB5:23026375:rev:-","HAUS4--PSMB5",1.0,1.0,3.0,1.0,0.971,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F4-01A","17:TIMP2:78924959:LGALS3BP:78977214:rev:-","TIMP2--LGALS3BP",1.0,0.0,1.0,0.0,0.817,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F4-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.566,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F4-01A","19:EEF2:3977819:-:3:PSMD2:184299257:+:fusion","EEF2--PSMD2",2.0,0.0,1.0,0.0,0.159,false,0.0362694300518]
["TCGA-UVM","TCGA-V4-A9F4-01A","6:DST:56552184:-:6:DEFB133:49946225:-:reg","DST--DEFB133",1.0,0.0,1.0,0.0,0.698,false,0.0103626943005]
["TCGA-UVM","TCGA-V4-A9F5-01A","17:LRRC75A-AS1:16441738:UBB:16381095:rev:+","LRRC75A-AS1--UBB",8.0,0.0,39.0,0.0,0.408,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F5-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",4.0,2909.0,156.0,153.0,0.404,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F5-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",12.0,0.0,1126.0,0.0,0.693,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F5-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.876,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F5-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.559,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F5-01A","17:LRRC75A-AS1:16441738:+:19:AC020909.3:50483351:-:fusion","LRRC75A-AS1--AC020909.3",3.0,2.0,7.0,0.0,0.234,false,0.0231481481481]
["TCGA-UVM","TCGA-V4-A9F5-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",4.0,0.0,192.0,0.0,0.248,false,0.0231481481481]
["TCGA-UVM","TCGA-V4-A9F5-01A","8:RPL30:98044943:-:9:MLANA:5908640:+:fusion","RPL30--MLANA",6.0,0.0,4.0,0.0,0.156,false,0.0231481481481]
["TCGA-UVM","TCGA-V4-A9F7-01A","1:KAZN:13893756:PRDM2:13816427:rev:+","KAZN--PRDM2",2.0,0.0,1.0,0.0,0.546,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F7-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.866,true,"NA"]
["TCGA-UVM","TCGA-V4-A9F7-01A","3:VGLL4:11702971:TAMM41:11817337:rev:-","VGLL4--TAMM41",1.0,1.0,2.0,0.0,0.939,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F7-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.663,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F7-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.164,false,0.00735294117647]
["TCGA-UVM","TCGA-V4-A9F7-01A","19:RPL13A:49491099:+:12:CD63:55726964:-:fusion","RPL13A--CD63",2.0,0.0,6.0,0.0,0.152,false,0.0335820895522]
["TCGA-UVM","TCGA-V4-A9F7-01A","3:ZNF660:44578289:+:17:MPRIP:17176426:+:fusion","ZNF660--MPRIP",1.0,8.0,28.0,4.0,0.814,false,0.00746268656716]
["TCGA-UVM","TCGA-V4-A9F7-01A","4:ANXA5:121669954:-:12:PMEL:55958607:-:fusion","ANXA5--PMEL",2.0,0.0,1.0,0.0,0.229,false,0.0223880597015]
["TCGA-UVM","TCGA-V4-A9F7-01A","6:TFAP2A:10397915:-:15:AC091073.1:48947185:+:fusion","TFAP2A--AC091073.1",4.0,2.0,3.0,0.0,0.165,false,0.0335820895522]
["TCGA-UVM","TCGA-V4-A9F8-01A","16:BCAR1:75229037:RNU6-758P:75286800:rev:-","BCAR1--RNU6-758P",2.0,726.0,603.0,54.0,0.467,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F8-01A","19:RPL18:48619141:DBP:48633655:rev:-","RPL18--DBP",1.0,8.0,26.0,2.0,0.871,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F8-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.455,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F8-01A","3:USP4:49293546:IP6K1:49748168:rev:-","USP4--IP6K1",1.0,12.0,9.0,2.0,0.871,false,"NA"]
["TCGA-UVM","TCGA-V4-A9F8-01A","19:CAPN12:38730274:-:10:VIM:17235846:+:fusion","CAPN12--VIM",2.0,0.0,2.0,0.0,0.167,false,0.0308641975309]
["TCGA-UVM","TCGA-VD-A8K7-01B","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.606,true,"NA"]
["TCGA-UVM","TCGA-VD-A8K7-01B","12:PMEL:55965936:-:6:CUL9:43213149:+:fusion","PMEL--CUL9",1.0,0.0,1.0,0.0,0.716,false,0.0]
["TCGA-UVM","TCGA-VD-A8K8-01A","16:MGRN1:4625048:HMOX2:4496146:rev:+","MGRN1--HMOX2",1.0,470.0,108.0,36.0,0.904,false,"NA"]
["TCGA-UVM","TCGA-VD-A8K8-01A","17:MNT:2387857:CLUH:2698590:rev:-","MNT--CLUH",1.0,0.0,1.0,0.0,0.84,false,"NA"]
["TCGA-UVM","TCGA-VD-A8K8-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.426,true,"NA"]
["TCGA-UVM","TCGA-VD-A8K8-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.78,true,"NA"]
["TCGA-UVM","TCGA-VD-A8K8-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",3.0,210.0,4870.0,17.0,0.504,false,"NA"]
["TCGA-UVM","TCGA-VD-A8K8-01A","13:TPT1:45340712:-:12:AC127070.1:132825701:+:fusion","TPT1--AC127070.1",1.0,53.0,3.0,2.0,0.599,false,0.0170316301703]
["TCGA-UVM","TCGA-VD-A8K8-01A","17:AC006435.2:2377359:-:14:NEK9:75084686:-:fusion","AC006435.2--NEK9",2.0,4452.0,5.0,4.0,0.626,true,0.0170316301703]
["TCGA-UVM","TCGA-VD-A8K8-01A","6:ZNRD1ASP:30008632:-:6:HLA-C:31270331:-:rev","ZNRD1ASP--HLA-C",1.0,164.0,16.0,11.0,0.712,true,0.00729927007299]
["TCGA-UVM","TCGA-VD-A8K8-01A","X:TMLHE-AS1:155474601:+:X:CLIC2:155299145:-:strandcross","TMLHE-AS1--CLIC2",1.0,156.0,25.0,5.0,0.746,false,0.00486618004866]
["TCGA-UVM","TCGA-VD-A8K9-01A","11:USP2-AS1:119395663:HINFP:119130725:rev:+","USP2-AS1--HINFP",2.0,484.0,14.0,5.0,0.497,true,"NA"]
["TCGA-UVM","TCGA-VD-A8K9-01A","18:DYM:49331864:RPL17-C18orf32:49483771:rev:-","DYM--RPL17-C18orf32",1.0,0.0,1.0,0.0,0.919,false,"NA"]
["TCGA-UVM","TCGA-VD-A8K9-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.609,true,"NA"]
["TCGA-UVM","TCGA-VD-A8K9-01A","2:RPL31:101006071:NPAS2:100977710:rev:+","RPL31--NPAS2",1.0,1.0,2.0,1.0,0.854,false,"NA"]
["TCGA-UVM","TCGA-VD-A8K9-01A","1:PRDX1:45511051:-:2:PCBP1-AS1:70087343:-:fusion","PRDX1--PCBP1-AS1",2.0,70.0,33.0,0.0,0.59,false,0.00657894736842]
["TCGA-UVM","TCGA-VD-A8K9-01A","6:HSP90AB1:44249583:+:4:RGS12:3423515:+:fusion","HSP90AB1--RGS12",5.0,0.0,1.0,0.0,0.214,false,0.00657894736842]
["TCGA-UVM","TCGA-VD-A8KA-01B","10:COX15:99731960:CWF19L1:100262063:rev:-","COX15--CWF19L1",1.0,0.0,1.0,0.0,0.871,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KA-01B","14:DHRS4L2:23987273:AL132780.2:22993810:rev:+","DHRS4L2--AL132780.2",1.0,0.0,1.0,0.0,0.998,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KA-01B","2:TGFBRAP1:105296356:FHL2:105386540:rev:-","TGFBRAP1--FHL2",1.0,3.0,5.0,1.0,0.936,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KA-01B","2:RPL37A:216500031:+:4:ANXA5:121668527:-:fusion","RPL37A--ANXA5",2.0,0.0,1.0,0.0,0.525,false,0.0036231884058]
["TCGA-UVM","TCGA-VD-A8KB-01A","12:AC018630.6:11034782:PRR4:11047188:rev:-","AC018630.6--PRR4",1.0,2052.0,512.0,403.0,0.893,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KB-01A","16:CLCN7:1474834:IFT140:1511150:rev:-","CLCN7--IFT140",1.0,0.0,1.0,0.0,0.976,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KB-01A","19:TMEM143:48360319:PLEKHA4:48839263:rev:-","TMEM143--PLEKHA4",2.0,84.0,7.0,6.0,0.874,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KB-01A","7:AC092167.1:110511060:IMMP2L:110663721:rev:-","AC092167.1--IMMP2L",1.0,2.0,5.0,1.0,0.933,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KB-01A","19:BSG:572701:+:19:SHC2:425231:-:strandcross","BSG--SHC2",1.0,24.0,29.0,6.0,0.921,false,0.0]
["TCGA-UVM","TCGA-VD-A8KD-01A","16:HSF4:67169941:AC018557.1:66720897:rev:+","HSF4--AC018557.1",7.0,0.0,168.0,0.0,0.52,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","19:LILRA6:54240831:LILRB2:54278562:rev:-","LILRA6--LILRB2",2.0,125.0,46.0,44.0,0.897,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",9.0,0.0,1126.0,0.0,0.592,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.768,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","9:CDK5RAP2:120388876:PHF19:120868356:rev:-","CDK5RAP2--PHF19",4.0,0.0,135.0,0.0,0.468,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.45,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KD-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.409,true,0.0117924528302]
["TCGA-UVM","TCGA-VD-A8KD-01A","14:CALM1:90401402:+:8:RPL30:98045399:-:fusion","CALM1--RPL30",2.0,0.0,1.0,0.0,0.191,false,0.0283018867925]
["TCGA-UVM","TCGA-VD-A8KD-01A","5:RPL37:40834181:-:19:AP3D1:2112823:-:fusion","RPL37--AP3D1",3.0,0.0,1.0,0.0,0.313,false,0.0141509433962]
["TCGA-UVM","TCGA-VD-A8KE-01A","15:AC124312.1:24982437:SNRPN:24967932:rev:+","AC124312.1--SNRPN",1.0,42.0,75.0,15.0,0.987,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KE-01A","16:AC092143.3:89970931:CPNE7:89595367:rev:+","AC092143.3--CPNE7",1.0,345.0,99.0,49.0,0.833,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KE-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.428,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KE-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.937,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KE-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.677,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KF-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.48,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KF-01A","19:C19orf25:1478774:-:19:PPP1R12C:55096335:-:rev","C19orf25--PPP1R12C",1.0,0.0,1.0,0.0,0.851,false,0.0108695652174]
["TCGA-UVM","TCGA-VD-A8KG-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.852,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KG-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",6.0,2404.0,367.0,349.0,0.565,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KG-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.963,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KG-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",5.0,1673.0,620.0,414.0,0.47,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KG-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",13.0,210.0,4870.0,17.0,0.55,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KG-01A","6:PRRC2A:31636811:+:17:PER1:8148259:-:fusion","PRRC2A--PER1",2.0,0.0,1.0,0.0,0.192,false,0.041095890411]
["TCGA-UVM","TCGA-VD-A8KH-01A","13:SLC7A1:29595416:UBL3:29777263:rev:-","SLC7A1--UBL3",1.0,0.0,2.0,0.0,0.95,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KH-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.485,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KH-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",9.0,0.0,1499.0,0.0,0.467,false,0.005]
["TCGA-UVM","TCGA-VD-A8KH-01A","12:CD63:55726121:-:16:RPS2:1964365:-:fusion","CD63--RPS2",1.0,0.0,1.0,0.0,0.85,false,0.00653594771242]
["TCGA-UVM","TCGA-VD-A8KH-01A","19:AC136469.1:8427702:-:20:CTSZ:58997753:-:fusion","AC136469.1--CTSZ",3.0,2676.0,112.0,69.0,0.203,true,0.0196078431373]
["TCGA-UVM","TCGA-VD-A8KH-01A","22:TANGO2:20065358:+:17:RPL38:74203693:+:fusion","TANGO2--RPL38",3.0,3673.0,1.0,1.0,0.186,true,0.0196078431373]
["TCGA-UVM","TCGA-VD-A8KH-01A","3:CTNNB1:41239353:+:3:RPL24:101686557:-:strandcross","CTNNB1--RPL24",2.0,0.0,4.0,0.0,0.161,false,0.0228758169935]
["TCGA-UVM","TCGA-VD-A8KH-01A","5:ERCC8:60944932:-:5:NDUFAF2:61152704:+:strandcross","ERCC8--NDUFAF2",1.0,0.0,1.0,0.0,0.759,false,0.00653594771242]
["TCGA-UVM","TCGA-VD-A8KI-01A","19:UQCR11:1598049:MOB3A:2085392:rev:-","UQCR11--MOB3A",2.0,8291.0,284.0,283.0,0.638,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KI-01A","12:PMEL:55955779:-:12:CALCOCO1:53713900:-:reg","PMEL--CALCOCO1",4.0,0.0,3.0,0.0,0.172,false,0.0138248847926]
["TCGA-UVM","TCGA-VD-A8KI-01A","1:ARF1:228097943:+:17:NEK8:28725897:+:fusion","ARF1--NEK8",2.0,0.0,1.0,0.0,0.311,false,0.0138248847926]
["TCGA-UVM","TCGA-VD-A8KI-01A","22:ZDHHC8:20139892:+:1:SSU72:1545002:-:fusion","ZDHHC8--SSU72",1.0,2.0,5.0,1.0,0.87,false,0.00921658986175]
["TCGA-UVM","TCGA-VD-A8KJ-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.555,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KJ-01A","7:MET:116731859:CAV1:116558946:rev:+","MET--CAV1",2.0,0.0,1.0,0.0,0.644,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KJ-01A","16:ZNF747:30534197:-:22:RPL3:39315555:-:fusion","ZNF747--RPL3",2.0,0.0,1.0,0.0,0.207,false,0.019801980198]
["TCGA-UVM","TCGA-VD-A8KJ-01A","1:EIF2D:206595718:-:16:CHMP1A:89647331:-:fusion","EIF2D--CHMP1A",1.0,15.0,7.0,0.0,0.934,false,0.0]
["TCGA-UVM","TCGA-VD-A8KJ-01A","22:ZDHHC8:20139892:+:1:SSU72:1545002:-:fusion","ZDHHC8--SSU72",2.0,2.0,5.0,1.0,0.847,true,0.0049504950495]
["TCGA-UVM","TCGA-VD-A8KJ-01A","2:NCL:231461651:-:13:TPT1:45340184:-:fusion","NCL--TPT1",1.0,0.0,1.0,0.0,0.835,false,0.0049504950495]
["TCGA-UVM","TCGA-VD-A8KJ-01A","6:FILIP1:75414697:-:6:KCNQ5:73105257:+:strandcross","FILIP1--KCNQ5",2.0,0.0,1.0,0.0,0.16,false,0.019801980198]
["TCGA-UVM","TCGA-VD-A8KJ-01A","6:QRSL1:106629705:+:6:AL357060.1:137763817:+:reg","QRSL1--AL357060.1",1.0,0.0,1.0,0.0,0.848,false,0.0049504950495]
["TCGA-UVM","TCGA-VD-A8KK-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",7.0,6005.0,679.0,674.0,0.555,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",15.0,0.0,1126.0,0.0,0.547,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",3.0,2404.0,367.0,349.0,0.452,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","19:ZNF574:42081549:AC243960.1:41554951:rev:+","ZNF574--AC243960.1",2.0,0.0,90.0,0.0,0.471,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.995,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","3:QARS:49095937:AC104452.1:49423856:rev:-","QARS--AC104452.1",7.0,7.0,180.0,0.0,0.465,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",3.0,1673.0,620.0,414.0,0.465,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KK-01A","8:RPL30:98044943:-:9:MLANA:5908640:+:fusion","RPL30--MLANA",3.0,0.0,4.0,0.0,0.17,false,0.0249110320285]
["TCGA-UVM","TCGA-VD-A8KL-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.827,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KL-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.42,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KL-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",10.0,0.0,192.0,0.0,0.153,false,0.015625]
["TCGA-UVM","TCGA-VD-A8KM-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",4.0,4613.0,511.0,496.0,0.422,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KM-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",4.0,0.0,423.0,0.0,0.415,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KM-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",10.0,0.0,1126.0,0.0,0.625,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KM-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.613,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KM-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",9.0,210.0,4870.0,17.0,0.678,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KM-01A","3:ZNF660:44578289:+:17:MPRIP:17176426:+:fusion","ZNF660--MPRIP",1.0,8.0,28.0,4.0,0.674,false,0.00374531835206]
["TCGA-UVM","TCGA-VD-A8KM-01A","7:TRBJ2-1:142796414:+:7:TRGC2:38249572:-:strandcross","TRBJ2-1--TRGC2",1.0,0.0,1.0,0.0,0.935,false,0.00187265917603]
["TCGA-UVM","TCGA-VD-A8KM-01A","7:TRBJ2-3:142796895:+:7:TRGC2:38249572:-:strandcross","TRBJ2-3--TRGC2",1.0,0.0,1.0,0.0,0.72,false,0.00374531835206]
["TCGA-UVM","TCGA-VD-A8KM-01A","7:TRBJ2-5:142797166:+:7:TRGC2:38249572:-:strandcross","TRBJ2-5--TRGC2",1.0,1.0,1.0,0.0,0.674,false,0.00374531835206]
["TCGA-UVM","TCGA-VD-A8KN-01A","10:OPTN:13100302:CDC123:12246149:rev:+","OPTN--CDC123",1.0,0.0,1.0,0.0,0.821,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KN-01A","13:CRYL1:20512443:EEF1AKMT1:20757617:rev:-","CRYL1--EEF1AKMT1",1.0,0.0,1.0,0.0,0.912,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KN-01A","19:RFX2:6199476:GTF2F1:6387559:rev:-","RFX2--GTF2F1",1.0,0.0,1.0,0.0,0.969,false,"NA"]
["TCGA-UVM","TCGA-VD-A8KN-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.431,true,"NA"]
["TCGA-UVM","TCGA-VD-A8KN-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",2.0,7942.0,781.0,771.0,0.405,true,0.0149253731343]
["TCGA-UVM","TCGA-VD-A8KN-01A","12:CDK2:55968169:+:X:RPS4X:72273389:-:fusion","CDK2--RPS4X",2.0,76.0,1.0,0.0,0.276,false,0.0199004975124]
["TCGA-UVM","TCGA-VD-A8KO-01A","19:MEIS3:47407079:-:19:HNRNPUL1:41305832:+:strandcross","MEIS3--HNRNPUL1",5.0,0.0,3.0,0.0,0.424,false,0.020725388601]
["TCGA-UVM","TCGA-VD-AA8M-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.609,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8M-01A","11:CTSD:1752999:-:6:RREB1:7228997:+:fusion","CTSD--RREB1",2.0,0.0,1.0,0.0,0.279,false,0.0357142857143]
["TCGA-UVM","TCGA-VD-AA8O-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",2.0,198.0,115.0,72.0,0.944,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8O-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.667,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8O-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.48,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8O-01A","5:ZSWIM6:61473037:NDUFAF2:61152704:rev:+","ZSWIM6--NDUFAF2",1.0,0.0,2.0,0.0,0.832,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8O-01A","9:NUDT2:34329599:UBE2R2:33886881:rev:+","NUDT2--UBE2R2",1.0,0.0,1.0,0.0,0.9,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8O-01A","8:RPL30:98044943:-:9:MLANA:5908640:+:fusion","RPL30--MLANA",3.0,0.0,4.0,0.0,0.162,false,0.0248756218905]
["TCGA-UVM","TCGA-VD-AA8P-01A","11:AP001273.2:93790793:CEP295:93706745:rev:+","AP001273.2--CEP295",1.0,0.0,1.0,0.0,0.802,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8P-01A","14:SETD3:99480728:CCDC85C:99522240:rev:-","SETD3--CCDC85C",1.0,0.0,1.0,0.0,0.828,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8P-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.464,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8P-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.444,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8P-01A","19:ACTN4:38730144:+:4:HSD17B13:87315599:-:fusion","ACTN4--HSD17B13",5.0,0.0,16.0,0.0,0.206,false,0.027149321267]
["TCGA-UVM","TCGA-VD-AA8P-01A","19:SSBP4:18433613:+:11:ILK:6603787:+:fusion","SSBP4--ILK",3.0,0.0,1.0,0.0,0.217,false,0.0226244343891]
["TCGA-UVM","TCGA-VD-AA8Q-01A","12:SCARB1:124863595:UBC:124913774:rev:-","SCARB1--UBC",1.0,198.0,115.0,72.0,0.843,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8Q-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.515,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8Q-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",17.0,210.0,4870.0,17.0,0.762176225813516,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8R-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.849,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8R-01A","2:FOXN2:48314814:MSH2:47445548:rev:+","FOXN2--MSH2",1.0,0.0,2.0,0.0,0.89,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8R-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",4.0,1673.0,620.0,414.0,0.553,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8R-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",8.0,210.0,4870.0,17.0,0.677,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8R-01A","12:METTL7A:50930422:+:20:CTSZ:58997753:-:fusion","METTL7A--CTSZ",2.0,742.0,1.0,0.0,0.482,false,0.022641509434]
["TCGA-UVM","TCGA-VD-AA8R-01A","1:RPL11:23694791:+:2:ANKZF1:219235708:+:fusion","RPL11--ANKZF1",2.0,0.0,1.0,0.0,0.223,false,0.0301886792453]
["TCGA-UVM","TCGA-VD-AA8S-01B","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",7.0,0.0,1126.0,0.0,0.43,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8S-01B","2:MAP4K4:101698538:CNOT11:101262539:rev:+","MAP4K4--CNOT11",1.0,0.0,2.0,0.0,0.968,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8S-01B","9:GLE1:128504904:ODF2:128500067:rev:+","GLE1--ODF2",1.0,0.0,1.0,0.0,0.963,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8S-01B","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.629,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",2.0,6005.0,679.0,674.0,0.411,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","19:RPL18:48619141:DBP:48633655:rev:-","RPL18--DBP",1.0,8.0,26.0,2.0,0.934,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","19:WDR83OS:12668071:HOOK2:12773253:rev:-","WDR83OS--HOOK2",2.0,2404.0,367.0,349.0,0.433,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.724,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","6:PPP1R10:30600400:FLOT1:30740853:rev:-","PPP1R10--FLOT1",2.0,2233.0,39.0,38.0,0.415,true,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.546,false,"NA"]
["TCGA-UVM","TCGA-VD-AA8T-01A","12:YARS2:32747076:-:12:NAP1L1:76053110:-:rev","YARS2--NAP1L1",1.0,1067.0,394.0,191.0,0.93,false,0.00574712643678]
["TCGA-UVM","TCGA-VD-AA8T-01A","16:MAF:79598785:-:16:WWOX:79211608:+:strandcross","MAF--WWOX",1.0,0.0,4.0,0.0,0.75,false,0.00574712643678]
["TCGA-UVM","TCGA-WC-A87T-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.797,true,"NA"]
["TCGA-UVM","TCGA-WC-A87T-01A","6:REV3L:111482750:FYN:111674630:rev:-","REV3L--FYN",1.0,2.0,15.0,2.0,0.944,false,"NA"]
["TCGA-UVM","TCGA-WC-A87T-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.548,false,"NA"]
["TCGA-UVM","TCGA-WC-A87T-01A","12:PMEL:55957259:-:10:VIM:17235169:+:fusion","PMEL--VIM",2.0,0.0,1.0,0.0,0.353,false,0.025641025641]
["TCGA-UVM","TCGA-WC-A87T-01A","15:PLA2G4B:41843223:+:17:SERPINF1:1771872:+:fusion","PLA2G4B--SERPINF1",16.0,2076.0,1.0,1.0,0.48959252798406,true,0.017094017094]
["TCGA-UVM","TCGA-WC-A87U-01A","19:C19orf43:12730640:HOOK2:12773253:rev:-","C19orf43--HOOK2",5.0,4613.0,511.0,496.0,0.406,false,"NA"]
["TCGA-UVM","TCGA-WC-A87U-01A","19:MAN2B1:12646513:HOOK2:12773253:rev:-","MAN2B1--HOOK2",8.0,2909.0,156.0,153.0,0.544,true,"NA"]
["TCGA-UVM","TCGA-WC-A87U-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.915,true,"NA"]
["TCGA-UVM","TCGA-WC-A87U-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.515,false,"NA"]
["TCGA-UVM","TCGA-WC-A87U-01A","20:GNAS:58909804:+:12:PMEL:55957059:-:fusion","GNAS--PMEL",3.0,0.0,3.0,0.0,0.153,false,0.028]
["TCGA-UVM","TCGA-WC-A87U-01A","8:RPL30:98045347:-:19:RPL13A:49491040:+:fusion","RPL30--RPL13A",2.0,1.0,1.0,0.0,0.239,false,0.024]
["TCGA-UVM","TCGA-WC-A87W-01A","19:AC022154.1:48620799:TEAD2:49341437:rev:-","AC022154.1--TEAD2",1.0,86.0,18.0,4.0,0.803,false,"NA"]
["TCGA-UVM","TCGA-WC-A87W-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.492,false,"NA"]
["TCGA-UVM","TCGA-WC-A87W-01A","10:VIM:17229870:+:2:SEPT2:241324409:+:fusion","VIM--SEPT2",3.0,0.0,7.0,0.0,0.386,false,0.00975609756098]
["TCGA-UVM","TCGA-WC-A87Y-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.666,false,"NA"]
["TCGA-UVM","TCGA-WC-A87Y-01A","17:TP53:7668421:MYH10:8493898:rev:-","TP53--MYH10",2.0,0.0,55.0,0.0,0.408,false,"NA"]
["TCGA-UVM","TCGA-WC-A87Y-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",5.0,0.0,1126.0,0.0,0.487,false,"NA"]
["TCGA-UVM","TCGA-WC-A87Y-01A","19:ZNF571-AS1:37551665:HKR1:37362109:rev:+","ZNF571-AS1--HKR1",1.0,0.0,1.0,0.0,0.922,false,"NA"]
["TCGA-UVM","TCGA-WC-A87Y-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.95,true,"NA"]
["TCGA-UVM","TCGA-WC-A87Y-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.491,false,0.00549450549451]
["TCGA-UVM","TCGA-WC-A87Y-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",7.0,2010.0,1976.0,1665.0,0.36,true,0.0222841225627]
["TCGA-UVM","TCGA-WC-A880-01A","19:NOP53:47745783:DHX34:47381980:rev:+","NOP53--DHX34",1.0,42.0,60.0,15.0,0.993,false,"NA"]
["TCGA-UVM","TCGA-WC-A880-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.899,true,"NA"]
["TCGA-UVM","TCGA-WC-A880-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",7.0,0.0,1499.0,0.0,0.267,false,0.0215827338129]
["TCGA-UVM","TCGA-WC-A880-01A","12:CD63:55725470:-:10:TCF7L2:113165555:+:fusion","CD63--TCF7L2",7.0,1.0,36.0,0.0,0.236,false,0.0045045045045]
["TCGA-UVM","TCGA-WC-A880-01A","15:AC107976.2:94856719:-:19:NOP53:47755474:+:fusion","AC107976.2--NOP53",2.0,67.0,90.0,15.0,0.379,true,0.0045045045045]
["TCGA-UVM","TCGA-WC-A880-01A","17:RPL23:38853022:-:7:ARPC1B:99385702:+:fusion","RPL23--ARPC1B",2.0,0.0,1.0,0.0,0.286,false,0.0045045045045]
["TCGA-UVM","TCGA-WC-A881-01A","17:ACLY:41866931:STAT5B:42202953:rev:-","ACLY--STAT5B",2.0,0.0,267.0,0.0,0.41,false,"NA"]
["TCGA-UVM","TCGA-WC-A881-01A","19:AC022154.1:48620799:TEAD2:49341437:rev:-","AC022154.1--TEAD2",1.0,86.0,18.0,4.0,0.994,false,"NA"]
["TCGA-UVM","TCGA-WC-A881-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.401,true,"NA"]
["TCGA-UVM","TCGA-WC-A881-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.412,false,"NA"]
["TCGA-UVM","TCGA-WC-A881-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",4.0,0.0,1499.0,0.0,0.365,false,0.025641025641]
["TCGA-UVM","TCGA-WC-A881-01A","13:ARGLU1:106543828:-:2:LPIN1:11779519:+:fusion","ARGLU1--LPIN1",5.0,0.0,205.0,0.0,0.318,false,0.025641025641]
["TCGA-UVM","TCGA-WC-A882-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",7.0,9462.0,7336.0,7317.0,0.546,true,"NA"]
["TCGA-UVM","TCGA-WC-A882-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.411,true,"NA"]
["TCGA-UVM","TCGA-WC-A882-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.579,false,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","11:ST3GAL4:126356302:DCPS:126338286:rev:+","ST3GAL4--DCPS",1.0,0.0,1.0,0.0,0.936,false,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",11.0,0.0,1126.0,0.0,0.459,false,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","19:SNRPA:40763675:LTBP4:40627705:rev:+","SNRPA--LTBP4",3.0,0.0,147.0,0.0,0.478,false,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.991,true,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","4:HTN1:70055602:HTN3:70036267:rev:+","HTN1--HTN3",3.0,160.0,3.0,3.0,0.936,true,"NA"]
["TCGA-UVM","TCGA-WC-A883-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",11.0,7942.0,781.0,771.0,0.339,true,0.0221238938053]
["TCGA-UVM","TCGA-WC-A883-01A","12:PMEL:55955796:-:5:APBB3:140564389:-:fusion","PMEL--APBB3",2.0,0.0,1.0,0.0,0.176,false,0.0353982300885]
["TCGA-UVM","TCGA-WC-A883-01A","20:GNAS:58909216:+:8:TSTA3:143613817:-:fusion","GNAS--TSTA3",3.0,0.0,4.0,0.0,0.225,false,0.0353982300885]
["TCGA-UVM","TCGA-WC-A884-01A","10:DNAJC1:22003213:PIP4K2A:22609717:rev:-","DNAJC1--PIP4K2A",1.0,2.0,2.0,0.0,0.857,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",4.0,0.0,1758.0,0.0,0.441,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","20:KIAA1755:38260498:SNHG17:38426503:rev:-","KIAA1755--SNHG17",1.0,0.0,1.0,0.0,1.0,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.883,true,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","2:HDAC4:239236593:NDUFA10:239961186:rev:-","HDAC4--NDUFA10",1.0,1.0,2.0,0.0,0.825,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","7:LMTK2:98107280:SDHAF3:97181012:rev:+","LMTK2--SDHAF3",1.0,0.0,2.0,0.0,0.927,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.451,false,"NA"]
["TCGA-UVM","TCGA-WC-A884-01A","10:VIM:17234818:+:12:DGKA:55952341:+:fusion","VIM--DGKA",2.0,0.0,1.0,0.0,0.344,false,0.0237154150198]
["TCGA-UVM","TCGA-WC-A885-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",9.0,0.0,423.0,0.0,0.421,false,"NA"]
["TCGA-UVM","TCGA-WC-A885-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",5.0,9462.0,7336.0,7317.0,0.88,true,"NA"]
["TCGA-UVM","TCGA-WC-A885-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",10.0,210.0,4870.0,17.0,0.619,false,"NA"]
["TCGA-UVM","TCGA-WC-A885-01A","12:PMEL:55955779:-:12:CALCOCO1:53713900:-:reg","PMEL--CALCOCO1",2.0,0.0,3.0,0.0,0.211,false,0.0287769784173]
["TCGA-UVM","TCGA-WC-A888-01A","19:C19orf70:5678422:DENND1C:6477588:rev:-","C19orf70--DENND1C",8.0,0.0,423.0,0.0,0.5,false,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","19:MKNK2:2037473:MOB3A:2085392:rev:-","MKNK2--MOB3A",5.0,6005.0,679.0,674.0,0.585,true,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","19:NDUFA11:5894675:DENND1C:6477588:rev:-","NDUFA11--DENND1C",6.0,0.0,1126.0,0.0,0.429,false,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","19:ZNF787:56087366:ZNF667:56440650:rev:-","ZNF787--ZNF667",2.0,0.0,31.0,0.0,0.448,false,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.678,true,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",7.0,210.0,4870.0,17.0,0.656,false,"NA"]
["TCGA-UVM","TCGA-WC-A888-01A","11:GSTP1:67586653:+:2:ATP5G3:175184607:-:fusion","GSTP1--ATP5G3",3.0,0.0,1499.0,0.0,0.19,false,0.0125786163522]
["TCGA-UVM","TCGA-WC-A888-01A","11:STT3A:125620888:+:19:AC092069.1:12944487:-:fusion","STT3A--AC092069.1",3.0,7942.0,781.0,771.0,0.511,true,0.00701754385965]
["TCGA-UVM","TCGA-WC-A888-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",11.0,4574.0,830.0,638.0,0.213,true,0.0245614035088]
["TCGA-UVM","TCGA-WC-A88A-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.636,true,"NA"]
["TCGA-UVM","TCGA-WC-A88A-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.773,false,"NA"]
["TCGA-UVM","TCGA-WC-A88A-01A","10:RPS24:78033904:+:19:RPL18:48617877:-:fusion","RPS24--RPL18",2.0,0.0,3.0,0.0,0.277,false,0.0121457489879]
["TCGA-UVM","TCGA-WC-AA9A-01A","14:PSMB5:23025858:AP1G2:23568070:rev:-","PSMB5--AP1G2",5.0,0.0,1758.0,0.0,0.418,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9A-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.993,true,"NA"]
["TCGA-UVM","TCGA-WC-AA9A-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",8.0,9462.0,7336.0,7317.0,0.7,true,"NA"]
["TCGA-UVM","TCGA-WC-AA9A-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",12.0,210.0,4870.0,17.0,0.652,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9A-01A","12:GAPDH:6537996:+:19:NOP53:47755474:+:fusion","GAPDH--NOP53",2.0,0.0,1.0,0.0,0.279,false,0.0153846153846]
["TCGA-UVM","TCGA-WC-AA9A-01A","12:PMEL:55955796:-:6:EEF1A1:73520056:-:fusion","PMEL--EEF1A1",2.0,0.0,1.0,0.0,0.163,false,0.0215384615385]
["TCGA-UVM","TCGA-WC-AA9A-01A","12:SRSF9:120465627:-:15:CPEB1-AS1:82692011:+:fusion","SRSF9--CPEB1-AS1",1.0,779.0,52.0,42.0,0.702,false,0.0]
["TCGA-UVM","TCGA-WC-AA9A-01A","5:RPL37:40834181:-:11:RPL27A:8683961:+:fusion","RPL37--RPL27A",4.0,0.0,5.0,0.0,0.267,false,0.0153846153846]
["TCGA-UVM","TCGA-WC-AA9E-01A","16:AC092143.3:89970931:CPNE7:89595367:rev:+","AC092143.3--CPNE7",1.0,345.0,99.0,49.0,0.94,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","19:AC022154.1:48620799:NOSIP:49560692:rev:-","AC022154.1--NOSIP",1.0,8342.0,621.0,613.0,0.932,true,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","19:SNRPD2:45690572:FBXO46:45713573:rev:-","SNRPD2--FBXO46",1.0,114.0,23.0,7.0,0.801,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.995,true,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","3:IGSF11:119034531:GSK3B:119923483:rev:-","IGSF11--GSK3B",1.0,0.0,1.0,0.0,0.855,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",5.0,210.0,4870.0,17.0,0.465,false,"NA"]
["TCGA-UVM","TCGA-WC-AA9E-01A","17:LRRC75A-AS1:16441738:+:8:ASAH1:18084100:-:fusion","LRRC75A-AS1--ASAH1",3.0,0.0,1.0,0.0,0.174,false,0.0197628458498]
["TCGA-UVM","TCGA-WC-AA9E-01A","6:TUBB:30722214:+:3:ABHD14B:51970184:-:fusion","TUBB--ABHD14B",1.0,178.0,3.0,1.0,0.799,false,0.00395256916996]
["TCGA-UVM","TCGA-WC-AA9E-01A","7:TTYH3:2632278:+:12:NOC4L:132150981:+:fusion","TTYH3--NOC4L",1.0,28.0,12.0,7.0,0.892,false,0.0]
["TCGA-UVM","TCGA-YZ-A980-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",3.0,9462.0,7336.0,7317.0,0.853,true,"NA"]
["TCGA-UVM","TCGA-YZ-A980-01A","2:UBXN4:135742011:RAB3GAP1:135113151:rev:+","UBXN4--RAB3GAP1",1.0,1.0,1.0,0.0,0.837,false,"NA"]
["TCGA-UVM","TCGA-YZ-A980-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",11.0,210.0,4870.0,17.0,0.728,false,"NA"]
["TCGA-UVM","TCGA-YZ-A980-01A","12:AC131009.1:131927963:-:18:ESCO1:21593488:-:fusion","AC131009.1--ESCO1",3.0,237.0,4.0,3.0,0.205,true,0.0590717299578]
["TCGA-UVM","TCGA-YZ-A980-01A","1:HMGN2:26474667:+:8:CLU:27606524:-:fusion","HMGN2--CLU",2.0,0.0,1.0,0.0,0.414,false,0.0295358649789]
["TCGA-UVM","TCGA-YZ-A980-01A","1:NFIA:61455524:+:5:PIK3R1:68288695:+:fusion","NFIA--PIK3R1",3.0,3586.0,14.0,14.0,0.173,true,0.0359281437126]
["TCGA-UVM","TCGA-YZ-A980-01A","3:AC092691.1:117997182:-:3:LSAMP:116444955:-:reg","AC092691.1--LSAMP",7.0,2010.0,1976.0,1665.0,0.605,true,0.0210970464135]
["TCGA-UVM","TCGA-YZ-A980-01A","6:HLA-B:31354479:-:6:ZNRD1ASP:30009171:-:reg","HLA-B--ZNRD1ASP",2.0,4574.0,830.0,638.0,0.197,false,0.0590717299578]
["TCGA-UVM","TCGA-YZ-A982-01A","17:GRB2:75318076:UNC13D:75841156:rev:-","GRB2--UNC13D",2.0,2223.0,62.0,62.0,0.418,true,"NA"]
["TCGA-UVM","TCGA-YZ-A982-01A","19:MAN2B1:12646516:HOOK2:12773253:rev:-","MAN2B1--HOOK2",2.0,835.0,50.0,45.0,0.403,false,"NA"]
["TCGA-UVM","TCGA-YZ-A982-01A","19:RINL:38867834:FBXO27:39024242:rev:-","RINL--FBXO27",2.0,129.0,19.0,0.0,0.403,false,"NA"]
["TCGA-UVM","TCGA-YZ-A982-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",4.0,9462.0,7336.0,7317.0,0.595,true,"NA"]
["TCGA-UVM","TCGA-YZ-A982-01A","2:PAX3:222294167:FARSB:222572022:rev:-","PAX3--FARSB",1.0,0.0,3.0,0.0,0.972,false,"NA"]
["TCGA-UVM","TCGA-YZ-A982-01A","3:SLC41A3:126006363:ALDH1L1:126115502:rev:-","SLC41A3--ALDH1L1",2.0,1673.0,620.0,414.0,0.403,false,"NA"]
["TCGA-UVM","TCGA-YZ-A983-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",6.0,9462.0,7336.0,7317.0,0.622,true,"NA"]
["TCGA-UVM","TCGA-YZ-A983-01A","X:UXT:47651798:SLC38A5:48469436:rev:-","UXT--SLC38A5",6.0,210.0,4870.0,17.0,0.629,false,"NA"]
["TCGA-UVM","TCGA-YZ-A984-01A","1:C1orf159:1116060:SSU72:1564916:rev:-","C1orf159--SSU72",1.0,0.0,2.0,0.0,0.928,false,"NA"]
["TCGA-UVM","TCGA-YZ-A984-01A","1:GPR153:6260825:ACOT7:6349866:rev:-","GPR153--ACOT7",1.0,0.0,1.0,0.0,0.814,false,"NA"]
["TCGA-UVM","TCGA-YZ-A984-01A","2:ALMS1P1:73674905:ALMS1:73608475:rev:+","ALMS1P1--ALMS1",2.0,9462.0,7336.0,7317.0,0.447,true,"NA"]
["TCGA-UVM","TCGA-YZ-A984-01A","17:PGS1:78378808:+:16:KIF22:29804814:+:fusion","PGS1--KIF22",3.0,0.0,80.0,0.0,0.152,false,0.00990099009901]
["TCGA-UVM","TCGA-YZ-A985-01A","6:TFAP2A:10397915:-:7:AP4M1:100104092:+:fusion","TFAP2A--AP4M1",12.0,0.0,192.0,0.0,0.401,false,0.0175438596491]