ID,CNV_type,chr,start,end,kbp,n_bins,mean_log2,validated_by_CGH,validated_by_PCR FNMN0001,homdel,Chr07,3804000,4063000,259,23,-4.08896648670236,TRUE,NA FNMN0003,homdel,Chr02,21058000,21891000,833,30,-3.64644351745829,NA,NA FNMN0003,homdel,Chr02,21966000,22879000,913,11,-3.59685951093363,NA,NA FNMN0003,homdel,Chr02,28612000,28835000,223,5,-3.38843320757773,NA,NA FNMN0003,homdel,Chr11,2374000,2470000,96,9,-4.22627464345423,NA,NA FNMN0004,dup,Chr17,7994000,10162000,2168,227,0.859832701763349,NA,NA FNMN0007,hetdel,Chr11,5709000,5952000,243,28,-1.07537498909023,NA,NA FNMN0008,homdel,Chr04,7155000,8125000,970,79,-3.67358255624473,TRUE,NA FNMN0008,homdel,Chr04,21508000,22738000,1230,32,-3.44633766050851,TRUE,NA FNMN0008,hetdel,Chr04,22951000,23178000,227,6,-1.79521836565345,FALSE,NA FNMN0012,homdel,Chr07,42205000,42345000,140,13,-3.57633302654257,NA,NA FNMN0012,homdel,Chr14,14436000,14508000,72,4,-3.25750439532752,NA,TRUE FNMN0013,hetdel,Chr18,28836000,32471000,3635,37,-0.880552545306309,NA,NA FNMN0013,hetdel,Chr18,32517000,32876000,359,9,-2.37954737270134,NA,TRUE FNMN0014,homdel,Chr10,35351000,36566000,1215,26,-3.6286362466324,TRUE,NA FNMN0015,hetdel,Chr04,9944000,10980000,1036,43,-0.698588271540398,NA,NA FNMN0015,hetdel,Chr18,28959000,32058000,3099,33,-1.0040084536687,NA,NA FNMN0015,hetdel,Chr18,32169000,32913000,744,12,-2.32986054060322,NA,TRUE FNMN0017,hetdel,Chr01,29463000,30946000,1483,10,-2.31147133655483,NA,TRUE(homdel) FNMN0017,homdel,Chr08,9450000,9458000,8,3,-3.5942628541954,NA,FALSE FNMN0019,homdel,Chr07,41585000,41632000,47,7,-3.42764291909444,NA,NA FNMN0019,homdel,Chr12,12354000,12998000,644,15,-3.68443658397998,NA,NA FNMN0021,homdel,Chr08,8401000,8457000,56,5,-4.02169118443742,NA,NA FNMN0022,homdel,Chr01,22621000,22974000,353,10,-3.49659390629906,TRUE,NA FNMN0025,dup,Chr06,1898000,5918000,4020,365,0.79460418314901,NA,NA FNMN0025,homdel,Chr11,12956000,13533000,577,11,-3.22699759375186,NA,NA FNMN0025,homdel,Chr12,26250000,26909000,659,12,-3.28332014510782,NA,NA FNMN0027,hetdel,Chr03,8366000,11500000,3134,41,-0.681691658058866,TRUE,NA FNMN0027,hetdel,Chr06,19085000,20983000,1898,52,-0.98584084039825,TRUE,NA FNMN0027,hetdel,Chr13,44888000,44992000,104,10,-1.345673147638,TRUE,NA FNMN0028,homdel,Chr17,16424000,21085000,4661,84,-3.61202165759379,NA,NA FNMN0029,homdel,Chr02,28836000,30647000,1811,29,-3.49870071973024,NA,NA FNMN0029,homdel,Chr06,37810000,38166000,356,9,-3.54530516820303,NA,NA FNMN0030,homdel,Chr06,37728000,38729000,1001,22,-3.3347800621471,TRUE,NA FNMN0030,homdel,Chr06,38745000,42873000,4128,91,-3.44115207513494,TRUE,NA FNMN0030,homdel,Chr06,42879000,45503000,2624,109,-3.86453525347403,TRUE,NA FNMN0030,homdel,Chr14,4314000,4343000,29,4,-3.63171493063188,TRUE,NA FNMN0031,homdel,Chr06,39216000,44045000,4829,121,-3.70125518763968,NA,NA FNMN0032,homdel,Chr07,25302000,26522000,1220,28,-3.28234193991951,NA,NA FNMN0032,dup,Chr07,26682000,27265000,583,12,0.409310723811269,NA,FALSE FNMN0032,homdel,Chr07,27279000,29355000,2076,47,-3.77970066325247,NA,NA FNMN0032,homdel,Chr10,14936000,15804000,868,21,-3.37789355012279,NA,NA FNMN0032,homdel,Chr10,20003000,21231000,1228,30,-3.60024317977885,NA,NA FNMN0034,homdel,Chr01,52404000,52518000,114,13,-3.8176228051138,NA,NA FNMN0035,homdel,Chr20,21720000,23338000,1618,34,-3.40662205107411,NA,NA FNMN0036,homdel,Chr04,50452000,50569000,117,9,-3.60143401663786,TRUE,NA FNMN0037,homdel,Chr10,6034000,6069000,35,3,-3.79321146934906,NA,TRUE FNMN0037,homdel,Chr19,46451000,46813000,362,37,-3.5200814664042,NA,NA FNMN0038,homdel,Chr01,47907000,47936000,29,3,-3.21699286245721,NA,FALSE FNMN0038,homdel,Chr09,39115000,39202000,87,3,-3.19693331527303,NA,FALSE FNMN0038,homdel,Chr13,23112000,23126000,14,3,-3.96271712578331,NA,FALSE FNMN0038,homdel,Chr16,33120000,33137000,17,3,-3.43898395308454,NA,FALSE FNMN0039,homdel,Chr09,46817000,46870000,53,5,-3.50338309699691,TRUE,NA FNMN0039,hetdel,Chr15,15938000,18336000,2398,54,-0.894007724806075,TRUE,NA FNMN0040,dup,Chr18,28678000,32168000,3490,53,0.787358370300123,NA,NA FNMN0041,homdel,Chr03,29988000,30008000,20,3,-3.44688940615492,TRUE,NA FNMN0041,homdel,Chr11,28826000,29449000,623,19,-3.30295659958381,TRUE,NA FNMN0041,homdel,Chr16,19461000,20207000,746,26,-3.40810174447799,TRUE,NA FNMN0042,hetdel,Chr06,23082000,30033000,6951,107,-0.879322712320374,NA,NA FNMN0042,hetdel,Chr06,32802000,40499000,7697,122,-0.871676901323864,NA,NA FNMN0043,homdel,Chr03,12506000,12984000,478,12,-3.65820819385495,NA,NA FNMN0043,hetdel,Chr12,2000,106000,104,12,-0.519744736443592,NA,FALSE FNMN0043,homdel,Chr14,15772000,19727000,3955,93,-3.72570066983634,NA,NA FNMN0043,homdel,Chr14,36370000,38148000,1778,32,-3.52042967079231,NA,NA FNMN0044,homdel,Chr02,26983000,29671000,2688,46,-3.59940682724977,NA,NA FNMN0044,homdel,Chr02,33232000,33759000,527,8,-3.85040177176797,NA,NA FNMN0044,homdel,Chr02,35322000,36215000,893,20,-3.85836250051122,NA,NA FNMN0044,dup,Chr16,17739000,18321000,582,10,1.19671306719292,NA,NA FNMN0045,homdel,Chr10,35351000,36566000,1215,26,-3.78139501464931,NA,NA FNMN0046,homdel,Chr05,39075000,39114000,39,6,-3.95975248590992,TRUE,NA FNMN0046,homdel,Chr10,44868000,45065000,197,19,-3.76026465840609,TRUE,NA FNMN0047,hetdel,Chr06,32802000,40499000,7697,122,-0.952153403424214,NA,NA FNMN0048,homdel,Chr02,41299000,41662000,363,25,-3.75637878974791,TRUE,NA FNMN0048,homdel,Chr03,19520000,21811000,2291,47,-3.25662104708759,TRUE,NA FNMN0049,homdel,Chr01,27182000,27935000,753,19,-3.83605889498225,NA,NA FNMN0049,homdel,Chr03,12506000,12984000,478,12,-3.44801643888681,NA,NA FNMN0049,homdel,Chr14,15010000,19727000,4717,108,-3.74265125009019,NA,NA FNMN0049,homdel,Chr14,24802000,24913000,111,3,-3.5940790916556,NA,TRUE FNMN0049,homdel,Chr14,35502000,39621000,4119,72,-3.56204457137874,NA,NA FNMN0051,homdel,Chr01,46717000,46729000,12,3,-3.66125646084586,NA,TRUE FNMN0051,hetdel,Chr01,47307000,47753000,446,11,-2.62578587200747,NA,TRUE(homdel) FNMN0053,homdel,Chr11,12956000,13533000,577,11,-3.46427524343647,NA,NA FNMN0053,homdel,Chr12,7372000,7553000,181,10,-4.16526671426111,NA,NA FNMN0053,homdel,Chr12,22889000,22923000,34,5,-3.76941010726277,NA,NA FNMN0053,homdel,Chr12,23296000,30970000,7674,116,-3.58404092352384,NA,NA FNMN0053,hetdel,Chr19,44905000,45215000,310,26,-0.915694576356661,NA,TRUE FNMN0055,homdel,Chr20,40774000,40782000,8,4,-4.04219070166395,NA,TRUE FNMN0056,homdel,Chr11,18492000,20036000,1544,44,-3.57292054924063,NA,NA FNMN0057,homdel,Chr05,29564000,29766000,202,4,-3.41159299214804,NA,NA FNMN0060,homdel,Chr01,21262000,22275000,1013,18,-3.28363701349162,NA,NA FNMN0060,homdel,Chr11,5121000,5200000,79,10,-3.53807565497087,NA,NA FNMN0061,hetdel,Chr10,21362000,31298000,9936,171,-0.999424503851563,TRUE,NA FNMN0061,homdel,Chr10,31547000,32394000,847,29,-3.54119530285155,TRUE,NA FNMN0061,hetdel,Chr10,32495000,34154000,1659,24,-0.929352299017784,TRUE,NA FNMN0061,homdel,Chr14,32931000,33366000,435,15,-3.58028996182573,TRUE,NA FNMN0061,homdel,Chr16,26527000,26986000,459,13,-4.35986856175946,TRUE,NA FNMN0062,hetdel,Chr12,22916000,30894000,7978,76,-0.735407868948537,NA,NA FNMN0062,homdel,Chr15,37359000,38582000,1223,20,-3.54750058528979,NA,NA FNMN0063,homdel,Chr07,32518000,33021000,503,12,-3.29989525492696,NA,NA FNMN0064,homdel,Chr05,36407000,36549000,142,11,-3.58206133563824,NA,NA FNMN0064,homdel,Chr06,47068000,47086000,18,3,-3.8463628577164,NA,NA FNMN0064,homdel,Chr09,15387000,16006000,619,11,-3.51076406073858,NA,NA FNMN0064,homdel,Chr17,11576000,11645000,69,15,-3.91030440883812,NA,NA FNMN0064,homdel,Chr20,35731000,35750000,19,4,-4.26680762091158,NA,TRUE FNMN0065,homdel,Chr11,12956000,13533000,577,11,-3.18615797086133,TRUE,NA FNMN0065,homdel,Chr12,7372000,7553000,181,10,-3.66450340580953,TRUE,NA FNMN0065,homdel,Chr12,22889000,22923000,34,5,-3.56274784438554,TRUE,NA FNMN0065,homdel,Chr12,23156000,30970000,7814,120,-3.39888886238796,TRUE,NA FNMN0065,homdel,Chr14,24965000,36236000,11271,269,-3.53510016768808,TRUE,NA FNMN0065,homdel,Chr17,16424000,17490000,1066,16,-3.41606147217668,TRUE,NA FNMN0065,homdel,Chr19,45071000,45215000,144,12,-3.80729994292733,TRUE,NA FNMN0066,dup,Chr01,41000,12954000,12913,647,0.453050260717455,TRUE,NA FNMN0066,hetdel,Chr01,13864000,14649000,785,17,-1.59872075637876,TRUE,NA FNMN0066,hetdel,Chr01,16521000,27862000,11341,168,-1.17085311544646,TRUE,NA FNMN0066,dup,Chr01,28047000,47559000,19512,438,0.253753843558334,TRUE,NA FNMN0066,dup,Chr01,47561000,56820000,9259,841,0.491625004352219,TRUE,NA FNMN0067,homdel,Chr15,6598000,6671000,73,13,-3.61939093718928,NA,NA FNMN0069,hetdel,Chr07,37438000,37864000,426,25,-0.891905956626159,TRUE,NA FNMN0069,homdel,Chr11,14981000,14998000,17,5,-3.78358867712218,TRUE,NA FNMN0069,homdel,Chr13,20384000,20414000,30,4,-3.75640435571111,TRUE,NA FNMN0069,homdel,Chr15,44021000,44078000,57,5,-4.04952439365113,TRUE,NA FNMN0069,homdel,Chr17,19806000,19957000,151,3,-3.11127091573165,TRUE,NA FNMN0070,hetdel,Chr02,24107000,34516000,10409,160,-1.01637410715018,NA,NA FNMN0070,homdel,Chr03,10602000,10690000,88,5,-3.14501855683698,NA,NA FNMN0070,hetdel,Chr19,34760000,35972000,1212,51,-0.916762719485955,NA,NA FNMN0072,dup,Chr11,5512000,5623000,111,15,0.855733087581368,NA,TRUE FNMN0072,dup,Chr12,2000,175000,173,26,0.747324822001289,NA,NA FNMN0074,hetdel,Chr05,20935000,22177000,1242,12,-1.12732182821313,NA,TRUE FNMN0074,dup,Chr07,42127000,42248000,121,17,0.779647941603566,NA,NA FNMN0075,dup,Chr13,43292000,44690000,1398,132,0.823953646858542,NA,NA FNMN0076,homdel,Chr06,23082000,25105000,2023,43,-3.6941637773859,NA,NA FNMN0076,homdel,Chr06,25907000,26931000,1024,26,-3.4011142672151,NA,NA FNMN0077,dup,Chr01,21700000,44619000,22919,469,0.221256988592689,TRUE,NA FNMN0077,dup,Chr01,44623000,56820000,12197,943,0.431741416604075,TRUE,NA FNMN0077,hetdel,Chr04,21242000,25005000,3763,55,-1.2393665471862,TRUE,NA FNMN0077,dup,Chr04,47008000,48590000,1582,135,0.456647017545844,TRUE,NA FNMN0077,hetdel,Chr10,23708000,26575000,2867,46,-0.90182089290972,TRUE,NA FNMN0077,hetdel,Chr13,82000,4822000,4740,72,-1.10658339192384,TRUE,NA FNMN0077,hetdel,Chr14,20293000,20346000,53,6,-2.4859536997675,TRUE,NA FNMN0077,hetdel,Chr14,20406000,24378000,3972,94,-1.1080532859955,TRUE,NA FNMN0077,dup,Chr19,29000,8892000,8863,362,0.42605408735771,TRUE,NA FNMN0077,dup,Chr19,34020000,50743000,16723,1359,0.478226538094678,TRUE,NA FNMN0082,homdel,Chr14,17542000,17679000,137,6,-3.44198281938709,NA,NA FNMN0083,homdel,Chr02,17647000,19677000,2030,42,-3.43881605644461,NA,NA FNMN0083,homdel,Chr06,27732000,28141000,409,10,-3.69962874349961,NA,NA FNMN0083,homdel,Chr13,31661000,31848000,187,8,-3.86781836677122,NA,NA FNMN0084,homdel,Chr04,45791000,45876000,85,8,-3.89418382548116,NA,NA FNMN0085,dup,Chr06,6438000,11530000,5092,453,0.880698245961174,TRUE,NA FNMN0085,homdel,Chr13,32714000,32892000,178,18,-4.56656596902025,TRUE,NA FNMN0086,hetdel,Chr06,27793000,31395000,3602,62,-0.981590220240638,NA,NA FNMN0086,homdel,Chr17,31528000,31674000,146,4,-3.32946816249155,NA,TRUE FNMN0088,dup,Chr11,28891000,29377000,486,14,0.9995497747129,NA,TRUE FNMN0088,hetdel,Chr17,3777000,4283000,506,48,-0.9982882856877,NA,NA FNMN0088,homdel,Chr19,43738000,43845000,107,12,-3.285762820024,NA,NA FNMN0088,hetdel,Chr19,47351000,47655000,304,28,-1.08434466450407,NA,NA FNMN0089,hetdel,Chr13,1460000,2206000,746,15,-0.919830232250832,NA,TRUE FNMN0089,homdel,Chr14,30185000,31035000,850,19,-3.34502394025923,NA,NA FNMN0090,dup,Chr03,36435000,41902000,5467,485,0.772613112270879,NA,NA FNMN0090,homdel,Chr15,33409000,33448000,39,8,-4.09080758497894,NA,NA FNMN0090,homdel,Chr15,33453000,35113000,1660,43,-3.16400334892165,NA,NA FNMN0090,homdel,Chr18,44563000,44911000,348,5,-3.59647216581782,NA,NA FNMN0091,homdel,Chr04,5448000,5568000,120,10,-3.64483176737145,NA,NA FNMN0091,homdel,Chr04,12388000,12993000,605,23,-3.33681515471785,NA,NA FNMN0092,homdel,Chr19,42149000,42276000,127,11,-3.78558272653285,NA,NA