{"text_format":"2","workbook":"xlsx","n_sheets":7,"sheets":["Table S1","Table S2","Table S3","Table S4","Table S5","Table S6","Table S7"],"not_rendered":{"charts":0,"images":0,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1900"}

{"sheet":"Table S1","index":0,"n_rows":85,"n_cols":13,"rows_kept":85,"cut":false,"hidden":false,"merged":[]}
["Summary data about the samples and patients."]
[]
["Sample_ID","Patient_ID","Gender","Age","Time point number*","N reads","N reads after QC","% of reads mapped to human genome","Shannon index","Archaea","Bacteria","Eukaryota","Viruses"]
["1HP","HP001","M",32,1,29466299,28009463,"0.6","2.64915778702311","0.01578","95.84997",0,"4.13425"]
["2HP","HP001","M",32,2,30742280,29341851,"0.71","2.1891917484182","0.0314","99.94481","0.02379",0]
["5HP","HP003","F",31,1,32086583,30497045,"0.32","2.31580026104699","10.14329","89.82368",0,"0.03303"]
["6HP","HP003","F",31,2,42706913,40959900,"0.62","2.54698275389706","0.00885","98.29303","0.00058","1.69753"]
["8HP","HP004","F",53,1,26487283,24913705,"2.27","2.05711543982948","0.02304","99.92547",0,"0.0515"]
["9HP","HP004","F",53,2,20588114,19380940,"0.86","2.11912697761975",0,"99.7373",0,"0.2627"]
["105HP","HP006","F",37,2,28633350,26755433,"0.22","2.43917636209868",0,"99.97447",0,"0.02553"]
["11HP","HP006","F",37,1,32042624,30492927,"0.32","2.17496166339767",0,100,0,0]
["15HP","HP007","M",42,1,38957839,36815943,1,"2.42946092704711","0.00388","99.98672",0,"0.00941"]
["16HP","HP007","M",42,2,36212439,34332944,"0.26","2.60773716266475",0,100,0,0]
["21HP","HP009","M",31,1,32813046,31341496,"0.13","2.55456783463185",0,"96.90573",0,"3.09427"]
["22HP","HP009","M",31,2,49168903,47015960,"0.34","2.74027921481061",0,"99.74137","0.00058","0.25805"]
["23HP","HP010","F",63,1,32471321,30983788,"0.2","2.74216782773576","0.16707","76.52707",0,"23.30586"]
["24HP","HP010","F",63,2,37796209,36033388,"0.3","2.27610059334129",0,"99.72892",0,"0.27108"]
["26HP","HP011","M",32,1,30316727,28803150,"1.21","2.7208601177394","0.13712","99.78454",0,"0.07835"]
["27HP","HP011","M",32,2,42666154,41153855,"0.26","2.03475762562683",0,100,0,0]
["31HP","HP012","F",50,1,34591877,33376777,"0.17","1.45580564677888",0,100,0,0]
["53HP","HP012","F",50,2,16447318,15456848,"0.13","1.36339863874555",0,100,0,0]
["32HP","HP013","M",43,1,45035034,43395287,"0.16","1.62764166011611",0,"99.61527",0,"0.38473"]
["33HP","HP013","M",43,2,35100933,33726369,"0.17","1.25672541094884",0,100,0,0]
["34HP","HP014","M",32,1,43032940,41048024,"0.21","2.60145235640083",0,"99.24497",0,"0.75503"]
["35HP","HP014","M",32,2,16754337,15309507,"0.99","1.56542402376156",0,"99.97118",0,"0.02882"]
["39HP","HP016","M",52,1,33786695,31932265,"1.37","3.02564676286654","0.45314","98.84097",0,"0.70589"]
["40HP","HP016","M",52,2,30497080,29141534,"1.15","2.44814133849214","0.44213","99.48477",0,"0.0731"]
["41HP","HP017","F",67,1,40434718,38915110,"0.18","1.64705201120622",0,"99.97328",0,"0.02672"]
["42HP","HP017","F",67,2,44367444,42953977,"0.21","2.14938667250532",0,"48.71644",0,"51.28356"]
["48HP","HP018","M",57,1,16781725,15203308,"0.42","2.46077789726601",0,"99.95854",0,"0.04146"]
["49HP","HP018","M",57,2,23962178,22135509,"0.41","2.83978570417608","0.06443","99.92858",0,"0.00699"]
["50HP","HP019","M",56,2,10132324,9265654,"1.59","1.13720106876074",0,"37.9192","0.03279","62.04801"]
["51HP","HP019","M",56,1,31701478,29913780,"0.63","2.58289445272511","1.26014","98.73986",0,0]
["55HP","HP020","F",27,1,15678714,14425392,"0.5","3.0212765168444",0,"99.90961",0,"0.09039"]
["56HP","HP020","F",27,2,13980850,12893298,"0.43","2.60805053647581",0,100,0,0]
["57HP","HP021","F",59,1,23176651,21515510,"0.24","1.16322972795404","0.01518","99.98482",0,0]
["58HP","HP021","F",59,2,49014002,46337340,"0.54","1.66220575873618",0,"98.90051","0.01071","1.08879"]
["59HP","HP022","F",60,1,18612323,17147733,"1.15","2.52952995085155","0.38946","91.27997",0,"8.33058"]
["60HP","HP022","F",60,2,12312385,10472420,"6.37","2.76367729351107","0.07752","58.19271",0,"41.72977"]
["61HP","HP023","F",31,1,17953971,16468662,"0.3","2.58544450103677",0,100,0,0]
["62HP","HP023","F",31,2,14811790,13498436,"0.54","1.93830095647487",0,"95.57609",0,"4.42391"]
["63HP","HP024","M",50,1,38235689,36286423,"0.13","1.81886850212503","0.07444","99.92556",0,0]
["64HP","HP024","M",50,2,13953647,12662718,"0.41","1.88701917455158",0,"98.73056",0,"1.26944"]
["67HP","HP025","F",42,1,21325956,19264533,"0.48","3.10443311656578","0.17909","99.82091",0,0]
["68HP","HP025","F",42,2,23542173,21669585,"0.13","2.16694401994492",0,"99.98975",0,"0.01025"]
["69HP","HP026","F",33,1,29777611,27434211,"0.16","3.21100190133159","0.20479","99.79521",0,0]
["70HP","HP026","F",33,2,24179648,22119193,"0.83","2.29565290144846","0.00716","98.69093",0,"1.30191"]
["71HP","HP027","M",69,1,18951695,17191801,"0.13","1.59070584774617","0.60662","97.37118",0,"2.02221"]
["72HP","HP027","M",69,2,21412359,18898743,"0.27","1.60068489288991","1.5094","97.64594",0,"0.84467"]
["73HP","HP028","M",54,1,33673891,31374016,"0.25","2.90087495716921",0,100,0,0]
["74HP","HP028","M",54,2,31820390,29769478,"0.21","2.75092854812908",0,100,0,0]
["77HP","HP030","M",49,1,28596737,26353981,"0.79","2.31142248347118","1.08322","98.86191","0.00922","0.04564"]
["78HP","HP030","M",49,2,34036537,31675081,"0.64","1.12160862215474","0.01092","99.96889",0,"0.0202"]
["79HP","HP031","M",37,1,28701211,26544860,"0.62","2.35059391555175",0,"99.79189",0,"0.20811"]
["80HP","HP031","M",37,2,45516022,42603526,"0.37","2.52026394412014","0.00604","99.97897","0.0064","0.0086"]
["83HP","HP033","M",30,1,20047869,18533834,"0.31","2.50157939422585","0.50942","99.462",0,"0.02858"]
["84HP","HP033","M",30,2,38181099,36416417,"0.1","1.90253654753709","0.02663","99.67362",0,"0.29975"]
["85HP","HP034","F",50,1,43235873,40959430,"0.27","2.13086354872321",0,"98.57427","0.0035","1.42223"]
["86HP","HP034","F",50,2,39630722,37450526,"0.32","2.32817358796107",0,"99.39755",0,"0.60245"]
["89HP","HP036","M",59,1,24415726,22951118,"0.26","2.36788151912675",0,"99.94635",0,"0.05365"]
["90HP","HP036","M",59,2,36221796,34226418,"0.36","2.34108859833748",0,"99.95364",0,"0.04636"]
["95HP","HP039","M",38,1,36401484,34030705,"0.14","2.99948062587569","0.00728","99.96157",0,"0.03114"]
["96HP","HP039","M",38,2,37759985,35759825,"0.2","2.70464665578567",0,100,0,0]
["97HP","HP041","F",61,1,33380594,31615420,"0.22","2.42315330225806",0,100,0,0]
["98HP","HP041","F",61,2,26482182,24758733,"0.16","2.21179513340148",0,100,0,0]
["101HP","HP043","M",65,1,28127102,25704278,"1.96","2.51246196784686","0.43388","99.15105",0,"0.41507"]
["102HP","HP043","M",65,2,28381877,24783528,"6.29","2.88398017307443","1.43698","96.73564",0,"1.82738"]
["106HP","HP044","M",36,1,25790417,22793767,"0.47","1.47415245627444","0.2575","99.7425",0,0]
["107HP","HP044","M",36,2,22188806,19271800,"0.55","2.29061585061441","0.26136","99.7209",0,"0.01774"]
["108HP","HP045","F",63,1,20544907,17917235,"1.98","3.01212679699179","0.40295","99.57094",0,"0.02611"]
["109HP","HP045","F",63,2,26717104,24954868,"0.39","3.04396555524717",0,100,0,0]
["130HP","HP056","M",54,1,52146279,48655516,"0.1","2.88524123666493",0,"99.99282",0,"0.00718"]
["131HP","HP056","M",54,2,37344696,34817100,"0.39","2.13304851270114",0,"99.99019",0,"0.00981"]
["134HP","HP058","F",33,1,24735603,20817810,"0.44","3.08047083793762","1.46704","98.47952",0,"0.05344"]
["135HP","HP058","F",33,2,14002322,11830447,"0.21","2.35811517436855","0.12415","98.20768",0,"1.66818"]
["136HP","HP059","F",47,1,43948575,37691379,"0.16","2.68577960544228",0,"99.98916",0,"0.01084"]
["137HP","HP059","F",47,2,19232252,16391221,"0.21","2.50578878831867","0.79672","70.0341",0,"29.16918"]
["159HP","HP062","M",74,1,41696060,36148602,"6.67","2.85574437589131","1.80787","98.18791",0,"0.00422"]
["160HP","HP062","M",74,2,21954465,10201679,"50.13","1.06213965756811",0,"99.88912",0,"0.11088"]
["163HP","HP063","F",63,1,36313148,33336629,"0.53","2.96682892222848","0.79821","98.4085",0,"0.79329"]
["164HP","HP063","F",63,2,26015301,23998147,"1.31","1.82349535695412",0,"99.96886","0.03114",0]
["167HP","HP064","M",45,1,41238310,38250856,"1.03","2.47605799084839",0,"99.72321","0.00452","0.27227"]
["168HP","HP064","M",45,2,46894406,43806380,"0.94","2.08606182304024",0,"99.43181",0,"0.56819"]
[]
["* 1 – before eradication, 2 – after eradication."]

{"sheet":"Table S2","index":1,"n_rows":55,"n_cols":81,"rows_kept":55,"cut":false,"hidden":false,"merged":[]}
["Relative abundance of microbial genera in the metagenomes of case group (the percentage of overall microbial abundance)\t"]
[]
["Sample_ID","1HP","2HP","5HP","6HP","8HP","9HP","105HP","11HP","15HP","16HP","21HP","22HP","23HP","24HP","26HP","27HP","31HP","53HP","32HP","33HP","34HP","35HP","39HP","40HP","41HP","42HP","48HP","49HP","50HP","51HP","55HP","56HP","57HP","58HP","59HP","60HP","61HP","62HP","63HP","64HP","67HP","68HP","69HP","70HP","71HP","72HP","73HP","74HP","77HP","78HP","79HP","80HP","83HP","84HP","85HP","86HP","89HP","90HP","95HP","96HP","97HP","98HP","101HP","102HP","106HP","107HP","108HP","109HP","130HP","131HP","134HP","135HP","136HP","137HP","159HP","160HP","163HP","164HP","167HP","168HP"]
["Patient_ID","HP001","HP001","HP003","HP003","HP004","HP004","HP006","HP006","HP007","HP007","HP009","HP009","HP010","HP010","HP011","HP011","HP012","HP012","HP013","HP013","HP014","HP014","HP016","HP016","HP017","HP017","HP018","HP018","HP019","HP019","HP020","HP020","HP021","HP021","HP022","HP022","HP023","HP023","HP024","HP024","HP025","HP025","HP026","HP026","HP027","HP027","HP028","HP028","HP030","HP030","HP031","HP031","HP033","HP033","HP034","HP034","HP036","HP036","HP039","HP039","HP041","HP041","HP043","HP043","HP044","HP044","HP045","HP045","HP056","HP056","HP058","HP058","HP059","HP059","HP062","HP062","HP063","HP063","HP064","HP064"]
["Akkermansia",0,0,0.02892,0,0,0,0,0,6.26271,0,0,0,0.01947,0,0.87471,0,0.34306,0,0.29222,0,2.83874,0,3.40003,0,0,0,0.18506,0,0,3.81504,0.53499,0,0.07976,0,0.00706,0,0,0,0,0,0.12482,0,0,0,0.35855,0.01134,0,0,0.20769,0,0,0,0,0,0,0,0,0,0,0,0.39322,0,0.34033,0,0,0,0.64617,0,0.03942,0.18147,3.41168,0,0.0068,2.41611,0.02003,0,0.17344,0,0,0]
["Alistipes",0.65781,1.62948,1.84031,1.24316,0.75623,3.6747,1.97552,0.41841,2.5098,1.9266,2.66403,1.36258,6.31243,3.54579,3.78754,5.73291,3.83349,4.15195,2.87113,2.02335,7.89364,0.17008,1.52265,1.92782,0.06028,0.35331,1.00466,3.75241,0,0.47914,8.79413,13.82325,0.0412,0,2.17687,3.72198,2.01854,0,0.07999,0.12114,2.2232,1.09649,16.72835,5.38359,0.08278,0,8.69533,7.80204,0.69371,0.26974,0.64626,0.54319,4.33855,0.97727,1.19037,2.10036,0.14391,0.22899,0.22291,0.17799,1.83652,4.94944,0.54562,1.7853,0.15941,0,4.92618,1.81736,2.98134,4.22844,3.18807,2.40273,0.21419,1.42354,4.55452,0,1.04245,0,0,0]
["Anaerostipes",0.79955,0.25529,0.19091,0.01149,0,0,0.0058,0.02985,0,0,0.00327,0,0.00578,0,0.01732,0.03027,0.00325,0,0.00048,0.03841,0.01442,0.72239,0.04649,0.07048,0.00191,0.5375,0,0.01185,0,3.15975,0.05474,0.18052,0.04485,0,0,0.00658,0.01914,0,0.01647,0,0.40035,0.05173,0.03435,0,0.04823,0,0.21065,0.01544,0.09246,0.01365,0.19936,0.42627,0.02352,0.01791,0,0.02663,0.0616,0.05437,0.06565,0.00964,0,0,0,0,0,0,0.76594,0.10897,0.06389,0.00246,0.06932,0.55484,0.1403,0,0,0,0.11578,0.08608,0.10373,0.05983]
["Bacteroidales_noname",0,0,0.00959,0,0.03325,0,0,0,0,0,0.05145,0.03989,0.14416,0,0.14551,0,0.05363,0.01282,0.04482,0,0.31615,0,0,0,0,0,0.43079,1.40561,0,0.00154,0.22936,0,0.01768,0,0,0,0,0,0.03816,0,0.35688,0.03382,0.25147,0,0,0,0.52698,0.78219,0,0,0,0,0.00918,0.01579,0,0,0,0,0,0,0.05306,0,0.14214,0.1475,0.083,0,0.18373,0.07702,0.03637,0.13031,0.09379,0,0.12931,0,0.21642,0,0.06858,0,0,0]
["Bacteroides",1.30259,3.27747,2.08014,32.75597,19.8278,60.23046,51.4433,20.82788,3.18247,31.48058,6.36527,17.15744,40.69637,61.04978,10.01532,39.31134,86.77262,84.68398,10.90915,7.59087,18.73819,13.66058,7.05206,2.92145,0.27835,3.29225,18.36064,21.5733,0.05787,0.92871,14.19706,25.84756,1.5745,5.7616,14.63931,17.70824,16.36968,10.5704,0.19659,2.35207,11.2887,10.26117,34.72623,56.21893,1.60559,0.43644,9.89393,43.53141,5.37051,3.88033,2.11884,38.49369,22.53357,12.21717,1.85607,1.49205,1.40626,2.65469,27.66244,33.27127,52.85153,49.935,8.67376,9.36715,0.08402,0.29154,27.39903,19.67829,28.07085,59.18962,8.05774,43.21354,2.55769,2.88543,18.40498,2.08757,4.36285,20.57537,17.59282,8.31916]
["Barnesiella",0.03358,0,0.14035,0.38278,0.03086,0,4.08454,0,0.61947,0.2518,0.26997,0,0.67272,0.46633,0.03996,0,0.68259,1.07648,0.58131,0.00042,5.04314,0,0,0,0.08173,0,0,0,0,0.15393,1.51325,2.53415,0.02283,0,0.49665,1.48997,0,0,0.08847,0.11873,3.50446,0.27017,2.53382,2.01131,0.07373,0.27805,0.4397,0.4005,0,0,0.0423,0,2.27793,0.56698,0.09681,0,0.49964,0,0,0,0.35037,0.8708,0.18386,0.36213,0.0137,0,1.28911,1.85751,0.25755,0.33563,0.17957,0,0,0.14013,0.52389,0,0,0,0,0]
["Bifidobacterium",1.43488,0.00199,3.78309,0.00233,0.00798,0,0,0.54987,1.48107,0,0,0.45668,0.2026,0,0.79171,0,0.00333,0,0.08243,0,0.52758,3.55928,0.29555,0,0,0,0.06784,0.13145,0,4.59329,2.13224,0,0.67086,0.15666,0.56388,0,0,0,0.22729,0.01851,0,0,1.03396,0,0.19965,0,0,0,1.23224,0.10092,0.12736,0,0.24746,0.39362,0.24903,0,1.98595,0,4.80487,0.36953,0.53651,0,0.58012,0.59286,1.00765,0.00632,1.7308,0.16752,0.50969,0.00753,0.75891,0,1.13759,0.03871,0.74294,0,1.04264,0.02113,1.30495,0]
["Blautia",3.30539,4.7987,6.461,24.59047,2.73019,2.39401,10.87041,3.40546,2.49119,1.44744,3.07012,21.66523,0.97747,10.65021,1.11264,0.51228,0.79835,2.18296,0.19355,0.4505,2.61193,2.78276,2.92534,2.2722,1.47738,15.56163,6.02875,11.08174,0.04007,10.05019,1.74474,2.53071,0.7844,0.443,1.55406,10.92736,2.54568,10.79041,1.04636,2.26061,4.41,1.7557,2.68578,13.80558,2.74719,2.29567,2.39404,1.16734,1.68385,0.92869,5.34447,8.97967,2.17955,1.45968,2.74824,3.35046,6.01395,5.32169,2.08875,1.51497,0.89176,2.16521,1.87518,1.85845,0.52219,0.98832,3.05304,14.01103,2.56067,0.53917,2.65055,3.20848,2.78031,1.71584,2.0937,0.36125,3.29365,0.57618,1.9758,2.82066]
["Butyrivibrio",0.0715,0.05023,0.03306,0.03746,48.79667,0,0,0,3.80367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00598,0,0,3.20649,0.00824,0.01892,0,0,0.38039,0,0,0,0,0,0.01858,3.61266,0.04029,0.00514,0.01199,0.00975,15.21508,19.81851,0.01981,0,0.09979,0.0615,0.05066,0.08971,0.04054,0,0.00297,0.00157,20.04416,15.75366,0,0,0.49431,0,0,0,17.8053,0.00255,0.07822,0,0.00394,0,5.38512,17.44847,0.02331,21.95575,0.01982,0,0.04915,0,0,0.01044]
["C2likevirus",2.16803,0,0.03303,0.0055,0.04249,0.14255,0,0,0.00941,0,0.75197,0.01813,23.10016,0.27108,0.03949,0,0,0,0.00723,0,0.75503,0.0173,0.70589,0.0731,0.02672,0.27855,0.01354,0.00699,0,0,0.09039,0,0,0,0.0203,23.27293,0,0,0,1.26944,0,0.01025,0,0.0102,0.50974,0,0,0,0,0.0202,0.20811,0.0086,0.02858,0.00274,0.41897,0,0.05365,0.04636,0.03114,0,0,0,0.10455,0.10111,0,0,0.02611,0,0,0.00981,0.05344,1.66818,0,0.02854,0.00422,0,0.07248,0,0.27227,0.54587]
["Catenibacterium",0,0,0,0,0.26945,0,0,0,0.92378,0,0,0,0,0,0,0,0,0,0.10867,0.14803,0,0,0,0,0,0,0,0,0,0,0.7729,0,0,0,0,0,0,0,0.43452,0.5101,0.84927,0.52907,0,0.04145,0.10971,0.18225,0,0,0,0,0,0,0,0,0,0,0.99686,0.81516,0,0,0.32739,0.02995,0,0,1.02477,0,0,0,2.79732,0.27769,0,0,0,0.21257,0.66482,0,0,0,0,0]
["Clostridiales_noname",0,0,0,0.0616,0,0,0.17947,0,0.02473,0,0,0.0026,0,0,0,0,0.00072,0.00282,0,0,0,0.00439,2.86523,1.44205,0,0.06508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22224,0.00271,0,0,0,0,0,0,0.01636,0,0,0.00178,0,0,0,0.00554,0,0,0,0.0042,0,0.0135,0.03068,0.03203,0,0,0,0,0,0,0,0,0,0.03259,0,0,0,0.03942,0,0]
["Clostridium",0.94266,0.15223,0.36832,0.16302,0.01711,0.56279,4.74401,0.01433,0,0.15851,0.07213,0.30319,0,0.01432,0,0.13331,1.60308,0.54724,0.00304,0.00597,0.14705,2.29422,0.3893,0.07323,0.83918,2.40366,0.22803,0.14562,0.63913,0,0.03744,0.13616,0,0.17886,0.02653,1.39568,0.07252,1.24791,2.29429,0,12.71788,0.04303,2.60939,1.18275,0.1919,0,0,0.23209,4.84079,0,0.19026,0.81036,0.03496,0.00843,0.10187,0.35361,0,0.01337,0.20656,0.42201,0,9.93053,1.22642,0.40592,0.4002,0,0.21649,0.8887,0.02058,0.054,2.8908,0.12968,4.59661,0.02036,6.48493,0.02206,5.17101,0.29286,0.07559,0.04256]
["Collinsella",0.25271,0.1552,0.13524,0,0,0,0,0.04073,0.09796,0.09276,0.03904,0,0.03333,0,0.25647,0,0,0,0.01301,0,0.19665,0,0.19318,0.10859,0,0,0.35055,0.12056,0,2.19725,0.1643,0,0.13403,0,0,0,0.047,0,0.21697,0,0.08064,0.07158,2.1663,0.00325,0.13094,0.02124,0.41842,0.06197,0,0,0.11362,0,0.20086,0.12506,0,0,0.28295,0.04313,0.25262,0.08233,0.0406,0,0.12981,0.07445,0.00478,0,0.47286,0.08708,0.03141,0,0.37117,0,0.29757,0.12259,0.15221,0,0.37596,0,0,0]
["Coprobacillus",0.01631,0.12358,0.01498,2.16857,0,0,0.21103,0.01597,0,0.01296,0,0.19168,0,0,0,0,0.01951,0.03983,0,0,0,0.68368,4.23069,1.06031,0,0.58867,0.03817,0.03836,0,0,0,0.0819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21454,0,0.03696,0,0,0,0,0.02291,0.00822,0,0,0.00513,0,0,0,0,0.18853,0,0,0,0,11.0053,0,0.12467,0,0.01235,0.97156,0.00142,0.00179]
["Coprococcus",2.5375,1.90858,4.6966,0.18949,1.12919,0.63496,0.05035,2.28083,33.69973,1.00519,0.56974,2.65506,5.92395,0,11.93767,0.29994,0,0,0.91297,0.55412,0.72205,0.00392,5.78911,8.17854,0.7035,0,0,0,0,2.64175,3.90433,0.80988,3.18397,0.04105,3.88754,0.60971,2.14918,0.07589,1.01245,0.71326,1.25624,0.95017,0.83823,0.05236,0.44246,0.75752,3.50986,0.48977,0.50249,0.10084,1.72102,2.28969,0.89083,0.01142,0.83149,23.0002,1.50014,0.79204,0.85663,0.17421,0.52234,0.11913,37.20494,14.0475,0.44286,0.83895,1.40567,6.0394,1.05629,0.49123,15.22032,0.09106,2.83522,0.42081,0.70959,0,2.25888,0.13483,0.72762,0.34228]
["Dialister",0,0,0,0,0.21548,0,0,0.62797,0,0,0,0,1.21951,0,2.55472,0.0292,0.74,0,0.07841,0,0,0,0.27012,0,0.51052,1.62853,0,0,0,0,10.20139,3.12482,4.15818,0,0,0,8.95314,0,5.49526,1.90342,0,0,0,0.0762,0,0,0,0,0,0,0,0,0.03989,0,0.0172,17.86999,0,0,8.98434,0,0,0,0,0.03847,0,0,0.31221,0,7.04869,0.00712,0.59726,0,0,0,5.07425,0,0.01576,0,0.00441,0]
["Dorea",4.67831,2.38487,0.52913,1.3755,0.28044,1.01818,0.04103,1.01027,0.95009,1.67602,0.50718,3.84844,0.24219,0,1.22311,0.19427,0.05597,0,0.11399,0.15911,0.75869,0,1.77049,0.42605,0.64378,0.14784,0.88889,0.50929,0,7.25226,1.36214,2.23204,0.53161,0.04413,0.88395,0.10338,1.2315,1.34556,0.93483,2.25673,2.50773,1.23895,1.36879,0.05386,0.89166,2.03131,0.78523,0.23798,0.53665,0.10734,0.76586,0.05646,1.40643,0.2538,1.34188,0.49617,0.87099,1.48959,3.40423,0.24206,0.24911,0.06024,0.52135,0.73645,0.41316,2.56972,1.41584,3.02588,2.39832,0.20351,1.47916,0.19698,6.58174,0.49632,1.75128,0,2.65758,1.12003,0.50561,0.2538]
["Enterococcus",0.04362,0.03871,0.05544,14.9228,0.00476,0,0.64143,0,0,0.08173,0.10023,0.02405,0.08184,0.10295,0,0,0,0,0,0,0.14107,0.27905,0,0.00166,0,0.14134,0,0,17.54145,0,0.1791,0,0.0198,11.95626,0.00569,0,0,0.23729,0.00296,0.36251,0,0.02466,0.01583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14747,0,0.00953,0.84562,0.9151,0.04491,0,0,0,0,0,0,0,0,0.0321,0.53518,0,4.04328,0.58817,3.10556,0.02355,0]
["Erysipelotrichaceae_noname",2.11187,1.05842,0.01198,1.49964,0.5658,0.01556,0.07853,0.01448,1.88344,0.94619,1.05276,0.154,0,2.19887,0,0.09044,0.00276,0.01029,0.21596,0.11301,0.00096,0.34713,0.5663,0.427,0.03213,0.624,3.10821,2.39002,0,0,0.01744,0.07399,0,0.12941,0.04394,0.18359,0,0.37547,0.75623,2.22907,1.06535,0.13876,0.11853,0.09101,0.30222,0.47034,2.69051,0,0.17115,0.03266,0.72434,0.06696,0.32947,0.00629,0.74095,0.08458,0.52553,0.0014,0.00706,0.00195,0.20783,0.08565,0.00624,0,0.18998,0.19334,1.09485,0.41112,1.03193,0,0,0.06166,0.01981,0.25211,0.51378,0,1.68572,0.13912,0,0.01105]
["Escherichia",0.05542,0.11259,0.54632,0.00465,0.04282,0.15223,2.86758,0,0.08512,0.1317,0.02154,0.27546,0.7555,2.10177,0.02211,0.0036,0.03491,0.05852,0,0,0.24925,0.64768,2.3429,0.58842,9.18745,1.15177,0.11368,0.13697,17.14778,0.19208,0.20742,0.21643,0.12066,23.89428,25.10272,0,0.02136,0,0.0405,0.54076,0.17981,0.1318,0.52622,5.07145,0.03848,2.54082,0,1.06943,0.36524,0.12219,0.03017,0.13808,0,0.01003,2.14439,0.02558,0,0.02495,1.42079,0.08571,0.06871,8.69765,4.28372,1.94342,0.0447,0.42447,0.46293,0.7056,0.03073,0.00828,0.67718,0.15023,0.28978,5.28515,0.55173,77.3253,10.50372,5.13574,0.25952,0.06267]
["Eubacterium",30.10962,45.9782,16.89273,1.02252,8.13312,9.31326,11.88206,52.73115,10.65417,16.652,1.14406,0.07116,6.95429,0,37.01437,8.54624,0.72187,0.76509,1.84091,7.20415,33.55147,65.39743,27.81958,56.75031,60.95981,0.2813,4.95691,8.57663,0.01215,4.30321,17.10877,12.50437,1.46081,0.01958,30.14997,2.46501,21.32382,45.92043,15.77478,2.26274,17.39319,11.85841,11.09319,0.28821,1.95625,2.06917,11.23945,8.11714,3.4983,0.49532,2.92256,0.12017,11.782,1.86723,11.87736,0.47059,12.43319,4.8491,11.07837,11.54334,19.91937,0.08013,12.04162,28.07768,1.59716,4.17491,24.91864,6.60988,13.06493,0.81736,16.65218,15.14159,15.81987,6.5308,13.56281,0.41589,16.32006,0.06289,5.75006,1.05017]
["Faecalibacterium",15.16774,13.75628,3.47994,1.19603,2.36088,5.4028,1.04905,4.64973,2.77858,10.74065,2.96974,0.55702,2.3,0,9.6569,6.62049,0.18296,1.98094,1.84002,2.8116,5.86901,0.63875,7.86044,6.22883,7.21599,0.85613,31.92287,11.30919,0,0.24786,5.72844,6.83754,2.15943,0.00826,1.90092,6.53787,17.41266,16.43328,4.34232,5.84932,9.58711,10.60993,1.83042,0.66624,1.78498,3.29678,29.28295,17.52634,16.01334,2.65847,34.89924,8.05296,6.75649,8.6855,36.67926,16.98526,21.02501,23.51956,13.76543,3.4361,4.36278,0.32729,12.61237,8.09969,1.43708,3.48057,6.59673,11.53466,1.26867,9.18855,6.54213,10.40382,0.96518,4.90448,12.11141,1.2808,8.49734,0.22385,22.38488,27.76023]
["Felixounalikevirus",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.16699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Flavonifractor",0.05984,0.01701,0,0.0842,0,0,0.13138,0.02579,0,0,0.00274,0.05801,0,0,0,0.02627,0.0257,0.03469,0,0.01059,0.0155,0,0,0,0.06456,0.22145,0,0,0,0,0,0,0,0,0,0,0.00167,0.04609,0,0,0,0.00463,0.0089,0,0,0,0,0.14273,0,0,0,0,0,0.00178,0.00078,0.06362,0,0,0.07164,0.13552,0,0.04607,0,0,0,0,0,0.15192,0,0.04595,0,0,0,0,0,0,0.00968,0,0.04814,0.05557]
["Haemophilus",0,0,0,0,0.00303,0,0,0.10417,0.00979,0,0.30875,0.1284,0.01621,0,0.00278,0,0,0,0,0,0.04048,0,0,0.01127,0.04193,0.05085,0.01582,0,0,0,0,0,0.18002,0,0,0,0,0,0.30687,1.27144,0,0,0,0,0.3637,0.07079,0.49474,0.34557,0,0,0.09945,0.07532,0,0.09626,0,0,0,0.07279,0,0,0,0,0,0.01618,0.5327,0.46134,0.03801,0,0.01775,0,0.01513,0,0.00122,0.0578,0.01625,0,0,0,0.4892,0.00479]
["Klebsiella",0,0,0,0,0,0,0,0.03828,0,0,0,0.15526,0,0.45222,0,0,0,0,0,0,1.96516,0,0,0.0919,0.97771,0.01666,0.98258,0.04902,0,0.01949,0,0,0,40.95434,0,0,0,1.6201,0.01479,0,0,0,0,0,0,0,0,0.08893,0,0,0,0.03181,0,0.00521,0,0,0,0.17949,0,0,0.03745,0,0.05725,0.24017,0,0.16365,0,0,0,0,0,0,0,0.03852,0,6.89796,0,0,0,0]
["Lachnospiraceae_noname",0.77792,0.946,0.13423,0.40832,0.00859,0.46874,1.96805,0.24496,0.05407,0.16221,0.12254,0.21584,0.1633,0.70379,0.18231,0.06861,0.07402,0.04083,0.90011,0.917,0.12803,1.91679,0.09086,0.092,0.80578,0.23366,0,0.03947,0,0.43923,0.06647,0.47936,0.30204,0.02645,0.46315,0.7508,0.39462,0.61316,0.13117,0.20422,0.48878,0.2239,1.64474,3.0573,0.31993,0.0136,0.42649,0.18637,0.08241,0.25582,3.40252,2.14415,0.30129,0.45001,0.42381,0.20386,0.22586,0.24098,3.88674,3.34026,0.56389,0.13859,1.50079,1.88422,0,0,0.31268,2.06574,0.11686,0.11236,0.31459,0.34378,1.07333,0.27413,0.01101,0,2.20626,0.1309,0.68914,0.05409]
["Lactobacillus",0.57733,0.20767,0,0.00582,0,0,0.09851,0.01725,0.00385,0,3.43082,0.05784,0.21756,0,0,0.00782,0,0,0,0,0.01643,0.07668,0,0,0.21742,0.46031,0.01895,0,0.1856,0.15159,1.21229,0,0,0.02296,0,0,0,0,0.7904,0,0.04315,0.07208,0.03881,0.00061,1.3491,0.13064,0.63295,0.11947,0.0533,0,0,0,0,0.00194,1.00813,0.95923,0,0,0,0.15945,0.05892,0,0.00953,0.02376,0,0,0,0.18539,2.85786,0,0,0,0.14171,0.03164,0.05278,0,0.0025,0,0.12744,0]
["Megamonas",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26445,3.37364,0,0,0.00239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37954,3.9151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Megasphaera",0,0,0,0,0,0,0,0,0,0,0,0,0.03592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.06252,0,0,0,0,0,0,0,0,0,0,0.00655,0,0,0,0,0,0,0,0.01373,0.00655,0,0,0,0.06154,0,0,0,5.36899,0,0,2.05563,0,0,0,0,0,2.12377,8.88509,0,0,0,0,0,0,0,0,0.44639,0,0,0,0,0]
["Methanobrevibacter",0.01578,0.0314,10.13556,0.00885,0.02304,0,0,0,0.00388,0,0,0,0.16707,0,0.13712,0,0,0,0,0,0,0,0.42229,0.39925,0,0,0,0.06443,0,1.18088,0,0,0.01518,0,0.38946,0.07752,0,0,0.07444,0,0.17909,0,0.20479,0,0.59241,1.25096,0,0,1.08322,0.01092,0,0,0.50942,0.02663,0,0,0,0,0,0,0,0,0.43388,1.37932,0.25394,0.23929,0.40295,0,0,0,1.46704,0.12415,0,0.73381,1.80787,0,0.79821,0,0,0]
["Mitsuokella",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10304,0.12208,0,0,0.04131,0,0,0,0,0,0,0.01653,0,0.06091,0,0,0,0,0,0,7.09149,33.70196,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Odoribacter",0.04951,0,2.25901,0.46725,0.4724,0,0.54929,0.03717,0.26162,0.2044,0.46937,0,0.69827,0.8043,1.22177,1.65654,0.1868,0.10047,0.34877,0.02831,0.47799,0,0.32513,0.01367,0.00691,0,0,0.47116,0,0.01419,0.48246,0.7806,0,0,0.56131,0.13958,0,0,0,0,1.21114,0.55041,0.60773,0,0.06989,0.17485,0.79358,0.69126,0.3935,0.40054,0.05691,0,0.27937,0.20533,0.09572,0.00715,0,0.44479,0,0,0.63182,0.06182,0.01915,0.73482,0,0,0.60858,0.53224,0.48318,0.25911,0.41591,0,0.02951,0.63342,0.67134,0,0.39069,0,0.653,0.33053]
["Oscillibacter",0.21225,0.08892,0.06828,0,0.00854,0.38079,1.24403,0.28059,0.0252,0.1489,0.04323,0.0833,0.01802,0,0.02539,0.04533,0.60763,0.67695,0.05905,0.04004,0.40732,0.17852,0.09083,0.04846,0.03255,1.67693,0.36092,0.37589,0,0,0.22138,0.47555,0.02367,0,0.1137,0.69069,0.59855,0.85133,0.00492,0,0.06933,0.17065,1.64415,0.22091,0.01812,0.01917,0.15077,0.69114,0.64491,0.32635,0.33889,1.86387,0.12059,0.29913,0.03619,0.17129,0.36249,0.39595,0.48518,1.24245,0.03678,0.09574,1.91967,0.19643,0,2.61747,0.05071,0.07998,0.00748,1.04152,0.07945,0.10852,0,0.02304,0.02152,0,0.27549,0,0.39515,0.09287]
["Parabacteroides",0.66334,2.62883,1.04991,12.46109,0.78242,2.15982,2.16954,1.19876,0.39505,1.63075,1.57437,0.78835,1.52091,4.08721,2.58993,0.02309,0.01075,0.00809,1.45697,0.13285,7.63158,0,1.49705,1.35129,0.15908,0.00878,0.75298,1.50113,0,0.10554,4.87332,0.0662,0.34658,0.06879,0.62238,1.57623,0.6798,0,0.03972,0.07664,5.3445,2.23354,2.26619,8.39789,0.12386,0,0.91092,3.99193,0.40321,0.58168,0.3645,0.12754,1.26209,1.06324,0.51001,0.10294,0.29311,0.51445,1.22989,2.95703,2.54513,18.66025,2.52592,1.94134,0.07164,1.34205,0.88913,0.35969,1.35451,1.6578,0.20848,0.65179,0.81795,0.61384,0.32603,1.06069,0.7942,12.13739,24.11159,17.66103]
["Paraprevotella",0.19187,0,0.08618,0,0,0,0,0,0.07308,0.69794,0.06516,0.59375,1.33556,0.68616,0,0,0,0,1.02243,0.39746,0.52646,0,0.52806,0.13335,0,0,0.53277,1.11888,0,0.01114,0,0,0.16382,0.00732,0,0,0,0,0.09111,0.15289,0.23895,1.11078,0,0,0.11491,0,0,0,0,0,0.90446,2.48614,0.33101,0.2482,0,0,0,0,0.61893,2.56816,0.99337,0,2.39686,1.16719,0.02288,0,0,0,0.00296,0,0.26698,0,0,0.34831,0,0,0.13579,0.00782,0,0]
["Parasutterella",0,0.27592,0.01885,0.06069,0,0,0,0,0,0,0.18122,1.06771,0,0,0,0,0,0,0.00225,0.06667,0.02308,0,0.08831,0.02214,0,0,0.20194,0.31845,0,0,0,0,0,0,0,0,0,0,0,0,0.04994,0.07456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34357,0,0,0,0.09552,0,0,0,0,0,0.01293,0.16485,0.01705,0,0,0,0,0.03288,0,0,0,0,0]
["Pediococcus",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.08523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03335,0,0,0,0,0,0,0]
["Peptostreptococcaceae_noname",0.03443,0.65779,0.08496,0,0.38492,1.17249,0,0.15076,0.15065,0.01885,0.02099,0.13243,0.0291,0,0.03366,0,0.05089,0,0,0.02368,0.1501,0.82529,0,0,0.01145,0.17544,0.34614,0.17873,0,0.03589,0.11626,0.14627,0.04853,0.0463,0.05223,0,0.06504,0,0.10573,0.23521,0,0.01459,0,0.16974,0.03996,0.478,0,0.0062,0,0,0,0,0.07351,0,0.0297,0.04853,0,0,0.01369,0.06876,0.04286,0.04696,0.01034,0.13005,0.05797,0,0,0.43754,0.04032,0,0.34364,0,0.08769,0.14683,0.16649,0,0.50925,0.33812,0.1867,0.04206]
["Phascolarctobacterium",0.15993,0.35937,0,0,0,0,0,0,0,0,2.61541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.01762,0,0,0,0,0,0,0,2.11337,2.29195,3.21559,0.00121,0.81016,0,1.73961,2.01104,1.98046,2.03977,0,0,0,0,0,0,4.53742,13.29307,0,0,2.82012,0.96059,0,0,0.02654,22.22814,0,0,0,0,0,0,0,0.71576,0,0,0,0,0,0]
["Prevotella",1.81896,11.32081,0.02102,0.02343,4.40938,0.26661,0,0.02641,0.42868,16.68869,37.32329,0.00357,0,0,9.45837,35.37652,0.0023,0.01233,66.27914,73.24116,0.05991,0,2.20844,0.62864,0.15263,0.00116,0.02314,0.04591,0.00573,0.11935,7.30951,2.47297,79.63949,12.30876,0.03688,0,0,0.00998,55.04768,59.57703,10.34273,50.67199,0.97297,0.10443,63.29931,58.78518,9.02802,0,36.40331,79.31309,7.6365,18.53617,33.28022,52.69256,11.91846,1.65065,0.44049,5.64856,1.7089,19.99898,0.1073,0.0262,0.01424,0.33147,61.31591,8.20244,0.02487,0,0.00583,0.08077,14.2814,0.00394,34.71904,2.10801,22.2355,2.52771,4.14944,49.77458,0.78921,0.09881]
["Pyramidobacter",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Roseburia",3.32589,4.17795,2.99005,0.02446,4.87203,3.91967,0.25205,1.12551,5.49138,2.33801,21.92825,22.57276,0.65692,0.00648,0.44978,0.54074,2.42441,3.50843,1.02487,0.41495,1.80064,0.0392,2.72048,2.30905,1.35286,0.54536,0.50483,0.58582,0.00319,0.36396,0.91004,1.20801,2.01993,0.0029,0.64538,0.97941,15.04178,0.03208,1.44989,0.98793,3.82071,0.87309,0.69114,0.55805,1.30167,1.11514,2.64108,3.95048,2.14151,1.05928,15.66187,11.1458,0.96726,1.57405,3.33678,1.02734,4.09906,1.20129,4.5863,12.30668,4.13759,0.35652,1.6375,0.68183,0.14808,0.79768,2.41504,0.42896,3.15338,0.28053,1.29904,0.32314,1.17683,1.05352,0.68487,1.28104,2.36425,3.53299,6.21216,19.02105]
["Ruminococcus",2.02891,0.96223,1.50911,0.46981,1.37969,1.47362,0.45135,7.65909,1.90634,3.12696,2.48944,18.95398,1.65766,0,1.07224,0.02254,0.24751,0,0.01543,0.00045,2.78178,4.12876,3.82606,3.56954,8.94124,10.48938,13.51998,20.76187,0,37.60145,3.54406,0,0.96328,0,6.01358,5.59188,7.92647,0.02502,1.67646,3.14843,3.36804,1.00385,4.44063,0,0.44921,0.0678,4.02998,0.00269,3.17569,0.78105,6.39239,0,2.93835,3.23594,1.55004,9.14928,1.19575,0.86472,4.41583,1.45405,2.51325,0.00813,1.4719,5.29032,0.23985,0,7.71562,8.77223,5.40291,5.43915,8.40788,1.05978,1.51669,2.72085,1.14232,0.56832,25.5207,0.0773,8.64816,19.78363]
["Siphoviridae_noname",1.96622,0,0,1.67256,0,0.12015,0,0,0,0,2.33232,0.23992,0.2057,0,0,0,0,0,0.3775,0,0,0,0,0,0,51.005,0,0,1.88103,0,0,0,0,1.07034,8.31028,18.45684,0,4.42391,0,0,0,0,0,1.28177,1.46593,0.84467,0,0,0,0,0,0,0,0,0.668,0.40161,0,0,0,0,0,0,0,1.7102,0,0,0,0,0,0,0,0,0,29.05777,0,0,0.06109,0,0,0]
["Streptococcus",3.67347,0.55061,0.19273,1.63589,0.4201,0.72763,0.15895,1.11581,0.00373,0,2.47718,4.85053,1.47334,0.00362,0.08881,0.0234,0,0.00983,0.11818,0.09192,0.63721,0.52179,0.1088,0.07318,2.54673,1.77753,0.78434,0.21118,1.95274,1.22567,0.18729,0.19187,0.10637,1.15708,0.18871,0.61962,1.88344,1.62571,4.5982,3.58118,0.14974,0.24794,0.68964,0.31684,0.00217,0,7.35936,2.87733,0.23948,0.00346,0.53517,0.45137,0.25215,0.54051,0.84325,0.74896,0.38559,0.261,1.66664,0.2098,0.11754,0.29971,0.06976,0.29742,0,0.08463,0.25881,13.13834,2.4771,0.05895,0.95931,1.78937,0.48735,0.03072,0.02666,1.56102,0.55852,0.31963,0.80337,0.24574]
["Subdoligranulum",18.0255,1.38402,40.04414,0.85388,1.87245,4.32436,2.09771,0.96069,19.51413,8.22357,4.48498,0.6466,1.51005,12.5805,2.94977,0.66007,0.35452,0.03539,0.12008,0.11171,1.48336,0.27627,17.22106,8.31954,1.90257,2.40336,14.15089,9.36269,0.00618,18.1674,11.30025,22.86033,0.69887,0.06085,0.76502,2.415,1.01734,3.51845,2.34509,4.20453,2.9598,1.20354,3.17391,0.13033,2.2788,2.1658,0.95167,1.3564,14.49529,2.37988,13.86711,2.48852,6.22325,12.34861,18.05938,13.1846,20.03738,20.35446,3.45428,0.94203,1.27768,0.5443,4.95213,15.64336,1.77406,2.93598,10.09304,4.88937,20.34438,15.22931,2.37181,0.91623,9.02393,11.08211,3.4183,0.33414,2.61528,0.0249,5.21658,1.17842]
["Sutterella",0.06107,0,0,0,0,0,0,0,0.02878,0,0,0,0,0,2.00353,0,0,0,0.66087,0,0,0,0,0,0,0,0,0,0,0.0347,0.64886,0,0,0,0.17641,0,0.01247,0,0,0,0,0,0.77891,0.13224,0,0.03253,0,0,0,0,0.04575,0,0,0,0,0,0,0,0.32696,3.2238,0.34609,0,0,0,0,0,0,0,0,0,0.64669,0,0,0,0,0,0,0,0,0]
["Synergistes",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Veillonella",0.06592,0.0833,0,0.00183,0.01671,0,0,0.13682,0.00348,0.0172,0.16586,0.13251,0.32707,0,0.00506,0.00799,0,0,0.01086,0.02648,0.01524,0.03129,0.00101,0,0.31292,0.36295,0.00742,0,0.10606,0.00139,0.00763,0,0.03155,1.40419,0.01913,0,0.05549,0,0.18769,0.13645,0,0.00409,0.00758,0.4671,0.32034,0.09195,0.39918,1.08627,0,0,0.17542,0.02817,0,0.05388,0.01491,0.0105,0,0.01476,0.08167,0,0.02048,0.40229,0.01843,0.00127,0,0.06953,0.0192,0.02081,0.03773,0,0.00771,0.00806,0,0.0969,0.06534,0.01622,0,1.10276,0.29084,0.00587]

{"sheet":"Table S3","index":2,"n_rows":4949,"n_cols":81,"rows_kept":1125,"cut":true,"hidden":false,"merged":[],"bounds":{"rows_first":500,"rows_last":125,"rows_between":500,"halvings":2}}
["Relative abundance of KO in the metagenomes of case group (the mass weight of overall microbial abundance)\t"]
[]
["Sample_ID","1HP","2HP","5HP","6HP","8HP","9HP","105HP","11HP","15HP","16HP","21HP","22HP","23HP","24HP","26HP","27HP","31HP","53HP","32HP","33HP","34HP","35HP","39HP","40HP","41HP","42HP","48HP","49HP","50HP","51HP","55HP","56HP","57HP","58HP","59HP","60HP","61HP","62HP","63HP","64HP","67HP","68HP","69HP","70HP","71HP","72HP","73HP","74HP","77HP","78HP","79HP","80HP","83HP","84HP","85HP","86HP","89HP","90HP","95HP","96HP","97HP","98HP","101HP","102HP","106HP","107HP","108HP","109HP","130HP","131HP","134HP","135HP","136HP","137HP","159HP","160HP","163HP","164HP","167HP","168HP"]
["Patient_ID","HP001","HP001","HP003","HP003","HP004","HP004","HP006","HP006","HP007","HP007","HP009","HP009","HP010","HP010","HP011","HP011","HP012","HP012","HP013","HP013","HP014","HP014","HP016","HP016","HP017","HP017","HP018","HP018","HP019","HP019","HP020","HP020","HP021","HP021","HP022","HP022","HP023","HP023","HP024","HP024","HP025","HP025","HP026","HP026","HP027","HP027","HP028","HP028","HP030","HP030","HP031","HP031","HP033","HP033","HP034","HP034","HP036","HP036","HP039","HP039","HP041","HP041","HP043","HP043","HP044","HP044","HP045","HP045","HP056","HP056","HP058","HP058","HP059","HP059","HP062","HP062","HP063","HP063","HP064","HP064"]
["K00002",5.76875E-005,5.33233E-005,4.83167E-005,1.51352E-005,0,0,0,0,3.78578E-005,0,0,6.41482E-005,0,0,0,0,0,0,0,0,2.05079E-005,0,7.48633E-005,0,0,0,0,0,0,0.000191775,0,0,0,0,0,0,0,7.86443E-005,0,0,0,0,0,0,0,0,4.88246E-005,0,0,0,5.9775E-005,0,0,0,2.08501E-005,0,4.15765E-005,0,0,0,0,0,0,0,0,0,0,0.000136598,0,0,0,0,0,0,0,0,4.43805E-005,0,0,0]
["K00003",0.000623969,0.00061884,0.000672578,0.000163676,0.000549579,0.00039272,0.000207073,0.000657756,0.000706874,0.000189894,0.000626356,0.000662834,0.000314178,7.21325E-005,0.0006546,0.000215687,0.000155693,0.000111095,0.000192237,0.000205567,0.000698392,0.000735536,0.000601407,0.000836341,0.000652303,0.000574369,0.00060352,0.000638102,0.000163472,0.00090615,0.000549326,0.000420994,0.000220049,1.66864E-005,0.00029845,0.000704559,0.000655162,0.000635679,0.000466556,0.000299164,0.00055681,0.000597399,0.000379464,0.000111401,0.000305643,0.000266038,0.000560933,0.000418598,0.000517841,0.000246938,0.000644902,0.000153815,0.000501429,0.000384686,0.000560668,0.000835583,0.000970624,0.000543553,0.000574469,0.000183771,0.000252091,3.57541E-005,0.000582764,0.000626791,0.000237797,0.000324794,0.000556887,0.000777985,0.000362412,0.000175884,0.000769625,0.000441838,0.000385051,0.000574033,0.000491709,0,0.000684047,0.000149513,0.000657351,0.000603969]
["K00004",0,0,0,0,0,0,0,0,0,0,6.74729E-005,7.65859E-005,0,0,0,0,0,0,0,0,0,0,0,0,1.54458E-005,2.77498E-005,0,0,0,2.51043E-005,0,0,0,0,0,0,0,0,4.46208E-005,0,0,0,0,0,0,0,4.96706E-005,0,0,0,0,0,0,0,1.36933E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50104E-005,0,0,0,0,0,0,0,0,0,0,0]
["K00005",0.000152164,0.000102986,6.45081E-005,0.000102394,7.7823E-005,0.000102467,3.04331E-005,6.58563E-005,5.78357E-005,3.51473E-005,9.9268E-005,0.000227869,5.1988E-005,4.8174E-005,3.92258E-005,2.07668E-005,3.42148E-005,0,0.000107157,0.000104314,8.04614E-005,7.4145E-005,0.000205624,0.00023352,0.000283684,0.000288387,0.000194759,0.000265324,0.000396903,0.000195447,9.44413E-005,9.36619E-005,5.5063E-005,0.00102937,0.000201081,0,0.000221249,0.000210554,9.05525E-005,0,0,8.76427E-005,0.000113588,9.73134E-005,0,0,9.23024E-005,6.00957E-005,0.000155032,0.000167711,7.15785E-005,2.3344E-005,0,5.50333E-005,9.74832E-005,0.000162394,8.12691E-005,2.35345E-005,0.000101299,1.78691E-005,4.41007E-005,7.40307E-005,0.000168606,0.000100616,0,0.000255778,0.000367241,0.00028957,0.000188416,0.000105451,0.000177961,0,0,0.000163071,0.000175293,0.000393737,0.000758577,0.000183238,0.00031943,0.000154721]
["K00007",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20844E-005,0,0,0,7.18508E-006,0,0,0,0,0,0,0,0,0.000182524,5.69415E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
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["K21993",7.09759E-005,4.26523E-005,0.0001767,0.000149469,0,0,6.73475E-005,4.9969E-005,6.36912E-005,0,0,5.90323E-005,2.82006E-005,0,2.61377E-005,0,3.06774E-005,0,0,0,4.12001E-005,4.02556E-005,6.46105E-005,8.81659E-005,6.47315E-005,9.04885E-005,0,0.000131317,0.000292154,6.50919E-005,0,0,0,0,0,0,0,0,0,0,0,0.00011768,2.78179E-005,0,0,0,5.13427E-005,4.68029E-005,0,0,4.24906E-005,0,6.69308E-005,3.10794E-005,2.02381E-005,4.07294E-005,9.40538E-005,0,4.95831E-005,0,0,0,4.57966E-005,6.16444E-005,0,0,0.000104979,7.3253E-005,3.51581E-005,3.41153E-005,0.000207358,0,0,0,0.000107207,0,0.000197308,3.35334E-005,8.79573E-005,5.83208E-005]
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["K22447",0,0,0.000300656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20185E-005,0,0,0,0,0]
["K22457",6.72887E-005,0,0,0.000106289,0,0,0,0,0,0,3.71874E-005,3.43651E-005,0,0,0,0,0,0,0,0,1.32024E-005,0,0,0,2.16032E-005,3.28325E-005,0,0,0.000141046,0,0,0,0,4.12145E-005,0,0,0,0,4.85193E-005,0,0,0,0,0,0,0,5.80819E-005,0,0,0,0,0,0,0,1.89799E-005,1.5227E-005,0,0,2.12347E-005,0,0,0,0,0,0,0,0,0.000125379,3.42009E-005,0,0,0,0,0,0,0,0,3.81034E-005,0,0]
["K22468",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31611E-005,0,0,0,9.05878E-006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22477",0.00043794,0.00051485,0.000269767,1.8701E-005,0.000127766,0,0,0.000326305,0.000181711,0.000110805,0.000159458,0.000340472,9.90205E-005,0,0.000368935,8.55383E-005,4.15356E-005,0,4.33671E-005,7.1131E-005,0.000261217,0.000811618,0.000248963,0.000405468,0.000557456,0.000241803,0.000150492,0.000419921,0,0.000148352,0.000332084,0.000111002,6.01182E-005,0,0.000166217,0.000213147,0.000333963,0.000330579,0.00029179,0,0.00014424,0,7.31014E-005,0,0,0,9.35898E-005,4.00331E-005,8.7519E-005,4.34691E-005,0.000166838,4.38523E-005,9.33423E-005,5.4466E-005,0.000133784,0.000123498,0.000141701,9.67072E-005,0.000168107,0.000122195,9.06493E-005,0,0.000136972,0.000233835,0,0,0.000207637,9.57627E-005,0.000187051,4.70575E-005,0.000165977,0,0,0,0.000151312,0,0.000184967,3.32002E-005,7.14906E-005,0.000280353]
["K22480",0,0,0.000151148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22481",0,0,0.000119496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22482",0,0,0.000184023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22486",0,0,0,0,0,0,0,0,0,0,0,0,0,2.78722E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000267773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000101459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.2697E-005,3.16718E-005,0,0,0,0,0,0,0,0,0,0,0,0,0.000244691,7.02205E-005,0,0,0]
["K22487",0,0,0,0,0,0,1.77909E-005,0,0,0,0,0,8.72005E-006,5.51435E-005,0,0,0,0,0,0,0,0,0,1.64369E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64304E-005,0,0,0,9.778E-006,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06972E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74811E-005,4.30801E-005,0,0,0]
["K22488",0,0,0,0,0,0,8.76302E-006,0,0,0,0,0,0,2.12633E-005,0,0,0,0,0,0,0,0,1.17923E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97645E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87879E-005,1.71163E-005,0,0,0,0,0,0,0,0,0,0,0,0,0.0001879,1.16894E-005,0,0,0]
["K22489",0,0,0,0,0,0,0,0,0,0,0,0,0,2.32814E-005,0,0,0,0,0,0,0,0,0,0,1.40994E-005,0,0,0,0,0,0,0,0,0.000107919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22501",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18077E-005,3.09381E-005,0,0,0.000195326,0,0,0,0,9.82976E-005,6.06777E-005,0,0,0,0,0,0,0,0,1.87468E-005,0,0,0,0,0,0,0,0,0,0,2.7516E-005,0,0,0,0,0,0,8.1427E-005,2.2604E-005,0,0,0,0,0,0,0,0,0,0,0,0,0.000110537,1.8297E-005,0,0,0]
["K22505",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0596E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000131457,4.33382E-005,0,0,0]
["K22506",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53412E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000293533,1.07615E-005,0,0,0]
["K22507",0,0,0,0,0,0,0,0,0,0,0,0,0,1.27202E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342E-005,0,0,0,0,0,0,0,3.78416E-006,0,0,0,0,0,0,0,0,0,5.1489E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000155709,0,0,0,0]
["K22508",0,0,0,0,0,0,0,0,0,0,0,0,0,8.40256E-006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8204E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22509",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3192E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["K22510",0,0,8.44396E-006,0,0,0,1.16417E-005,0,0,0,0,0,0,4.74027E-005,0,0,0,0,0,0,0,0,4.32874E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000106941,0,4.65582E-005,0,9.37335E-006,0,0,0,8.55434E-006,0,0,1.02243E-005,0,0,0,0,0,0,0.000109583,2.24398E-005,0,0,0,0,0,0,0,0,0,2.2497E-005,9.77373E-005,6.95895E-006,0.000590942,1.84018E-005,0,0,0]
["K22513",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29853E-005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000268448,1.902E-005,0,0,0]
["K22514",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.000225675,0,0,0,0]
["K22516",0,0,0.000241304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]

{"sheet":"Table S4","index":3,"n_rows":15,"n_cols":8,"rows_kept":15,"cut":false,"hidden":false,"merged":[]}
["KEGG pathways differentially abundant between of the 1st and 2nd time points"]
["The values in the \"p adj dist.dir.dn\" column denote the significance for the pathways decreased in the patients, and \"p adj dist.dir.up\" - for the increased ones."]
["Pathways name","KEGG Brite","ID","Genes tot found","p adj dist.dir.down","p adj dist.dir.up","Genes up","Genes down"]
["Aminoacyl-tRNA biosynthesis","Genetic Information Processing","ko00970",27,"0.0069326",1,3,24]
["Flagellar assembly","Cellular Processes","ko02040",14,"0.0069326",1,1,13]
["Ribosome","Genetic Information Processing","ko03010",54,"0.0069326",1,3,51]
["Quorum sensing","Cellular Processes","ko02024",54,"0.010399",1,17,37]
["ABC transporters","Environmental Information Processing","ko02010",104,"0.016638",1,40,64]
["Two-component system","Environmental Information Processing","ko02020",53,"0.017332",1,21,32]
["Bacterial chemotaxis","Cellular Processes","ko02030",11,"0.017827",1,2,9]
["Ubiquinone and other terpenoid-quinone biosynthesis","Metabolism","ko00130",6,1,"0.010399",6,0]
["Other glycan degradation","Metabolism","ko00511",8,1,"0.016638",8,0]
["Lipopolysaccharide biosynthesis","Metabolism","ko00540",14,1,"0.010399",13,1]
["Lipoic acid metabolism","Metabolism","ko00785",3,1,"0.016638",3,0]
["Metabolic pathways","Metabolism","ko01100",571,1,"0.016638",322,249]

{"sheet":"Table S5","index":4,"n_rows":427,"n_cols":81,"rows_kept":427,"cut":false,"hidden":false,"merged":[]}
["Relative abundance of antibiotic resistance genes in the metagenomes"]
[]
["Sample_ID","1HP","2HP","5HP","6HP","8HP","9HP","105HP","11HP","15HP","16HP","21HP","22HP","23HP","24HP","26HP","27HP","31HP","53HP","32HP","33HP","34HP","35HP","39HP","40HP","41HP","42HP","48HP","49HP","50HP","51HP","55HP","56HP","57HP","58HP","59HP","60HP","61HP","62HP","63HP","64HP","67HP","68HP","69HP","70HP","71HP","72HP","73HP","74HP","77HP","78HP","79HP","80HP","83HP","84HP","85HP","86HP","89HP","90HP","95HP","96HP","97HP","98HP","101HP","102HP","106HP","107HP","108HP","109HP","130HP","131HP","134HP","135HP","136HP","137HP","159HP","160HP","163HP","164HP","167HP","168HP"]
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["Bla.cfxA6.GQ342996.798.1793.966.betalactams.Class_A_betalactamases.CFX",497.99197,1571.28514,0,0,0,0,0,0,0,0,2517.06827,0,0,0,739.95984,3855.42169,0,0,3995.98394,3427.71084,0,0,288.15261,275.1004,0,0,0,0,0,0,146.58635,72.28916,1980.92369,714.85944,0,0,0,0,2134.53815,511.04418,191.76707,1560.24096,0,0,78.31325,0,0,0,1252.00803,3310.24096,241.96787,1191.76707,927.71084,2372.48996,0,0,34.13655,775.1004,0,0,0,0,0,95.38153,1748.99598,868.4739,0,306.2249,0,0,494.97992,0,3035.14056,202.81124,0,0,356.4257,4067.26908,0,0]
["CARD.phgb.M35190.0.624.ARO.3002670.cat.Phenicol.Chloramphenicol_acetyltransferases.CAT",442.30769,107.37179,676.28205,804.48718,482.37179,777.24359,0,0,291.66667,0,0,134.61538,0,51.28205,0,0,0,0,104.16667,0,269.23077,0,0,0,887.82051,0,0,97.75641,0,0,0,0,0,0,0,0,0,0,1264.42308,185.89744,0,0,655.44872,0,493.58974,762.82051,0,0,0,0,0,0,0,0,852.5641,262.82051,0,192.30769,0,953.52564,208.33333,552.88462,538.46154,384.61538,0,0,0,0,3177.88462,2448.71795,0,0,458.33333,56.08974,0,0,421.47436,0,1939.10256,2647.4359]
["Tet.AJ295238.gene.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TET32",279.6875,0,245.83333,285.41667,106.25,0,140.625,194.27083,245.3125,67.70833,0,0,182.29167,413.54167,264.0625,232.8125,0,0,122.39583,0,168.75,70.3125,325,277.60417,969.79167,169.27083,0,104.16667,0,0,0,0,0,0,70.3125,95.83333,261.97917,287.5,88.02083,0,189.58333,120.3125,143.22917,0,0,0,271.35417,149.47917,214.58333,109.375,235.9375,183.33333,0,211.97917,0,330.20833,161.97917,214.0625,326.04167,120.3125,100.52083,90.10417,230.72917,209.375,105.72917,153.64583,159.89583,158.85417,300,0,0,0,0,0,172.39583,0,136.97917,71.35417,174.47917,280.72917]
["Tet.EU434751.1.gene2.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETW",356.22096,200.82602,305.111,0,99.12235,105.83376,78.98813,121.32163,465.66856,184.82189,195.14713,198.76097,90.86216,0,280.84667,358.28601,0,0,143.52091,95.50852,488.3841,0,290.65565,266.90759,128.03304,395.97315,131.64688,256.06608,0,161.07383,80.53691,102.73619,0,0,0,115.64275,0,61.43521,102.73619,0,195.14713,69.69541,203.92359,90.86216,79.50439,157.45999,213.21631,100.15488,240.57821,88.79711,212.18379,158.49251,98.60609,309.75736,601.9618,519.8761,275.68405,233.8668,140.9396,0,0,0,255.03356,274.13526,130.09809,434.69282,82.0857,244.19205,0,211.15126,243.15953,78.47186,0,155.9112,277.7491,0,334.02168,0,364.48116,304.07847]
["Tet.Tet.32.DQ647324.181.2100.1920.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TET32",103.125,0,175.52083,471.35417,0,0,0,61.45833,112.5,0,0,0,0,545.83333,89.58333,0,0,0,127.60417,0,66.66667,0,360.41667,262.5,269.27083,75,0,119.79167,0,0,0,0,0,0,0,0,0,121.875,0,0,182.29167,100.52083,0,0,0,0,0,0,229.16667,0,159.89583,0,0,0,0,0,106.25,121.875,142.1875,0,93.22917,0,0,195.3125,178.125,276.04167,0,77.60417,273.4375,0,0,0,0,0,89.0625,0,58.85417,0,67.1875,120.3125]
["Tet.tetO_2_M20925.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETO",338.02083,596.35417,226.04167,216.66667,160.9375,102.08333,251.5625,360.41667,331.77083,89.0625,480.20833,1167.70833,226.04167,244.27083,387.5,320.83333,173.4375,0,83.33333,85.41667,281.77083,109.375,265.10417,297.39583,1974.47917,310.9375,75,114.0625,0,672.39583,95.3125,104.6875,102.08333,0,114.0625,144.79167,440.10417,502.60417,177.60417,77.60417,202.60417,162.5,208.85417,289.58333,0,129.6875,473.4375,247.39583,193.75,103.64583,303.125,217.1875,247.39583,264.0625,305.72917,425,191.66667,278.64583,459.375,207.29167,75.52083,107.29167,452.60417,253.64583,78.125,78.64583,239.0625,242.1875,328.125,78.125,120.83333,143.22917,0,155.20833,231.77083,0,271.875,101.04167,277.08333,438.02083]
["Tet.tetO_3_Y07780.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETO",283.33333,458.33333,190.10417,177.08333,124.47917,96.875,252.60417,301.5625,280.72917,0,458.85417,1394.79167,185.41667,238.02083,335.41667,262.5,164.58333,0,0,0,269.27083,96.35417,233.85417,265.625,2041.14583,339.0625,75,101.04167,76.5625,695.83333,0,80.20833,89.58333,0,93.75,146.35417,391.66667,488.54167,135.41667,76.04167,169.79167,160.41667,168.22917,207.8125,0,127.60417,377.60417,198.95833,172.91667,113.54167,234.375,170.83333,244.79167,208.85417,327.08333,370.3125,160.41667,234.375,408.33333,148.95833,67.1875,92.70833,404.16667,232.29167,0,0,271.875,257.8125,261.97917,61.97917,129.6875,118.22917,0,134.375,204.6875,0,228.125,119.79167,236.97917,334.89583]
["Tet.TetO.M18896.207.2126.1920.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETO",450.52083,796.35417,290.625,216.66667,184.89583,139.0625,224.47917,368.75,384.375,0,514.0625,1096.875,278.125,310.9375,424.47917,374.47917,189.0625,0,107.29167,129.6875,340.625,119.27083,325,336.45833,1829.16667,308.85417,115.10417,145.3125,0,740.625,96.875,132.8125,109.375,0,138.02083,181.77083,445.83333,457.8125,191.14583,86.97917,246.875,203.64583,265.625,294.79167,82.8125,153.125,467.1875,260.41667,238.02083,156.25,385.41667,304.6875,295.83333,339.58333,388.02083,519.27083,210.9375,327.60417,593.22917,195.83333,89.58333,110.9375,476.04167,300.52083,0,103.125,286.45833,268.75,350,85.9375,148.4375,143.22917,0,179.16667,306.77083,0,231.77083,111.45833,302.08333,478.64583]
["Tet.tetQ_1_L33696.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETQ",706.6459,1520.2492,1129.2835,2726.8951,465.2129,747.6636,1101.7653,962.6168,660.4361,1967.2897,2184.839,854.621,1109.5535,953.271,906.5421,1985.9813,2370.1973,1124.6106,808.9304,302.6999,944.4444,127.2066,461.5784,469.8858,126.1682,0,380.0623,545.1713,0,0,271.5472,395.1194,1159.3977,502.5961,262.7207,154.7248,140.7061,0,1040.4984,439.2523,592.4195,2141.2253,1376.4278,858.2555,542.5753,710.7996,566.9782,4054.5171,207.1651,314.1225,146.9367,907.0613,287.1236,1199.3769,395.1194,276.2201,0,353.5826,588.2658,1492.2118,968.3281,1330.7373,372.2741,365.5244,1194.1848,577.8816,816.7186,258.0478,1181.7238,1288.162,231.0488,377.9855,1507.7882,279.8546,591.9003,0,0,422.6376,1370.7165,1417.9647]
["Tet.tetQ_3_U73497.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETQ",119.7218,248.8823,179.8311,656.7312,0,0,0,0,0,335.3204,0,139.5926,0,0,151.5152,335.3204,302.0368,177.3472,0,0,0,0,0,0,0,0,0,134.1282,0,0,0,125.1863,303.5271,127.6701,0,0,0,0,248.8823,0,0,277.1982,238.4501,360.159,0,0,121.7089,626.4282,0,0,0,306.0109,151.5152,381.0233,0,0,0,322.9011,133.6314,321.4108,207.6503,0,0,0,208.6438,0,0,0,398.4103,260.8048,0,0,512.6677,0,0,0,0,0,0,0]
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["Tet.tetW_5_AJ427421.Tetracyclines.Tetracycline_resistance_ribosomal_protection_proteins.TETW",339.58333,192.1875,261.97917,0,97.39583,104.6875,66.66667,134.89583,394.79167,174.47917,177.60417,194.79167,84.375,0,275,343.75,0,0,145.83333,84.375,398.4375,0,268.75,245.3125,96.35417,385.9375,102.08333,253.125,0,141.14583,70.83333,87.5,0,0,56.77083,110.9375,0,0,93.75,0,188.02083,60.41667,197.91667,86.97917,76.5625,169.27083,210.9375,84.375,229.16667,86.45833,185.9375,164.58333,94.27083,274.47917,567.70833,509.89583,248.4375,227.60417,133.85417,0,78.64583,0,236.97917,237.5,121.35417,421.875,85.41667,215.625,0,208.85417,182.29167,66.66667,0,150.52083,233.33333,0,308.33333,0,304.6875,311.97917]
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["X518.AJ007350.1.AJ007350.betalactams.Class_A_betalactamases.ACI",0,102.924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,167.2515,1143.8596,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
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["MLS.ErmF.M14730.241.1041.801.MLS.23S_rRNA_methyltransferases.ERMF",0,716.60424,0,300.87391,0,0,182.27216,0,0,941.32335,775.2809,126.09238,182.27216,998.75156,0,0,0,0,0,0,0,0,0,77.40325,0,87.39076,98.62672,79.90012,0,0,0,137.32834,214.73159,117.35331,0,0,0,0,1022.47191,179.77528,0,218.4769,0,0,0,245.94257,0,73.65793,252.18477,554.30712,0,59.92509,137.32834,350.81149,0,0,0,465.66792,192.25968,388.26467,86.14232,161.04869,93.63296,0,0,240.94881,0,101.1236,370.78652,0,0,0,1347.06617,0,240.94881,0,0,379.52559,0,943.82022]
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["Flq.QnrB66_1_KC580655.Fluoroquinolones.Quinolone_resistance_protein_Qnr.QNRB",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["X252.FJ744595.1.FJ744595.Multi.drug_resistance.Multi.drug_efflux_pumps.EMRD",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["X871.DQ022190.1.DQ022190.Glycopeptides.VanC.type_regulator.VANRC",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Bla.AmpH.CP003785.4208384.4209544.1161.betalactams.Penicillin_binding_protein.AMPH",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Flq.CP000647.1.gene2640.Fluoroquinolones.Fluoroquinolone.resistant_DNA_topoisomerases.GYRA.RequiresSNPConfirmation",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Flq.OqxA.EU370913.46652.47827.1176.Multi.drug_resistance.Multi.drug_efflux_pumps.OQXA",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Flq.OqxBgb.EU370913.47851.51003.3153.Multi.drug_resistance.Multi.drug_efflux_pumps.OQXB",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Mdr.CP000647.1.gene2517.Multi.drug_resistance.MDR_regulator.ASMA",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Mdr.CP000647.1.gene956.Multi.drug_resistance.MDR_mutant_porin_proteins.OMPF.RequiresSNPConfirmation",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Mdr.oqxB_1_EU370913.Multi.drug_resistance.Multi.drug_efflux_pumps.OQXB",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["MLS.ErmQ.L22689.262.1035.774.MLS.23S_rRNA_methyltransferases.ERMQ",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["MLS.L22689.1.gene1.MLS.23S_rRNA_methyltransferases.ERMQ",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]
["Tet.TetA.P.L20800.Tetracyclines.Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps.TETA",0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]

{"sheet":"Table S6","index":5,"n_rows":23,"n_cols":5,"rows_kept":23,"cut":false,"hidden":false,"merged":[]}
["Antibiotic resistance genes groups differentially abundant before and after eradication."]
["The values in the \"p adj dist.dir.dn\" column denote the significance for the pathways decreased in the patients, and \"p adj dist.dir.up\" - for the increased ones."]
[]
["Mechanisms","Antibiotics class","Status after therapy","p adj. dist.dir.dn","p adj. dist.dir.up"]
["Class A betalactamases","Beta-lactam","none","0.40856","0.9988"]
["Quinolone resistance protein Qnr","Fluoroquinolone","none","0.40856","0.9988"]
["Tetracycline resistance efflux pumps","Tetracycline","none","0.72468","0.9988"]
["Dihydrofolate reductase","Trimethoprim","none","0.17332","0.9988"]
["Tetracycline resistance ribosomal protection proteins","Tetracycline","decrease","0.012999","0.9988"]
["23S rRNA methyltransferases","MLS*","increase",1,"0.0039996"]
["Macrolide resistance efflux pumps","MLS*","none","0.72468","0.9988"]
["Chloramphenicol acetyltransferases","Chloramphenicol","none","0.17332","0.9988"]
["Macrolide phosphotransferases","MLS*","none",1,"0.9988"]
["Tetracycline inactivation enzymes","Tetracycline","none","0.72468","0.9988"]
[]
["Gene groups","Antibiotics class","Status after therapy","p adj. dist.dir.dn","p adj. dist.dir.up"]
["tetO","Tetracycline","decrease",0.0051995,1]
["tetW","Tetracycline","decrease",0.0025997,1]
["CFX","Beta-lactam","increase",0.99,0.043329]
["ermB","MLS*","increase",0.99,0.0051995]
["tetQ","Tetracycline","increase",0.99,0.043329]
[]
["*MLS — Macrolides, lincosamides, streptogramines."]

{"sheet":"Table S7","index":6,"n_rows":219,"n_cols":17,"rows_kept":219,"cut":false,"hidden":false,"merged":[]}
["MAGs assembly statistic, taxonomic annotation and detection value (yellow color) across time points."]
[]
[]
["bin","patient_ID","completeness","contamination","GC","N50","size","Time point 1","Time point 2","Time point 3","Domain","Phylum","Class","Order","Family","Genus","Species"]
["HP003_bin.1","HP003",71.06,1.901,0.636,4334,1663594,0.886255092919,0,0.407726359944,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.11","HP003",71.14,0.949,0.355,7960,1762847,0.884261377788,0,0.000183119352872,"k__Bacteria","NA","NA","NA","NA","NA","NA"]
["HP003_bin.12","HP003",99.62,0.187,0.372,57306,2906044,0.00397115820833,0.999041477156,0.00231094465607,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Enterococcaceae","g__Enterococcus","s__Enterococcus_faecalis"]
["HP003_bin.13","HP003",97.57,2.556,0.564,7583,2728806,0.908007247312,0.014243638925,0.955014205159,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.14","HP003",89.88,1.685,0.28,25813,1108918,0.995631019119,0,0,"k__Bacteria","NA","NA","NA","NA","NA","NA"]
["HP003_bin.15","HP003",83.17,6.198,0.531,2727,1814611,0.731983989977,0.000142415950586,0,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","NA","NA"]
["HP003_bin.16","HP003",76.56,5.18,0.539,2037,1334250,0.911635068661,0,0.3132986295,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.17","HP003",90.99,1.503,0.416,12942,5493886,0.0483943896226,0.994447245036,0.865157121695,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_ovatus"]
["HP003_bin.18","HP003",98.52,4.165,0.438,14583,2382072,0.966855492356,0.11003664687,0.938786810211,"k__Bacteria","p__Firmicutes","c__Negativicutes","o__Selenomonadales","f__Acidaminococcaceae","NA","NA"]
["HP003_bin.19","HP003",92.3,1.81,0.633,4557,2140450,0.742160485134,0.000170937178053,0.859638401501,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.2","HP003",72.06,2.622,0.59,4623,1954361,0.859385587505,0.000225573194126,0.165853190507,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.20","HP003",84.09,2.371,0.637,4801,2030303,0.643186576293,0,0.660589321329,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.21","HP003",93.33,1.796,0.462,13172,3295536,0.19496230869,0.98917252151,0.910955232146,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_stercoris"]
["HP003_bin.22","HP003",74.43,3.038,0.414,7308,4073581,0.354926501508,0.98596450961,0.96625447058,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_dorei"]
["HP003_bin.23","HP003",74.76,4.159,0.297,28794,1197601,0.996831251429,0,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.24","HP003",88.75,1.898,0.487,5675,2428987,0.969378720298,0.000118375420576,0.000911286473135,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP003_bin.25","HP003",90.54,1.644,0.376,4794,2014593,0.840527291429,0.0947996055919,0.457632980674,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.26","HP003",95.02,6.774,0.649,5825,3239404,0.0179024059815,0.495393854482,0.359015646789,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","g__Eggerthella","NA"]
["HP003_bin.27","HP003",92.24,3.864,0.446,3863,2562783,0.943016251284,0,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.28","HP003",81.58,2.147,0.419,5806,1868843,0.86377565351,6.85123244572E-005,0.730588117489,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.29","HP003",98.24,0.473,0.418,22576,2574883,0.966838193108,0.996287556579,0.79230950794,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Ruminococcus","NA"]
["HP003_bin.3","HP003",93.49,2.921,0.483,11271,2029424,0.978631010122,0,0.956815982576,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.30","HP003",95.8,3.884,0.528,6005,2410426,0.925211656746,0.126351037053,0.319975347705,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.31","HP003",85.12,1.342,0.542,4481,1516630,0.951384842867,0.000422420063748,0.000326346884231,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.32","HP003",93.19,1.698,0.401,8240,2014366,0,0,0.852159914378,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Ruminococcus","NA"]
["HP003_bin.33","HP003",94.46,2.591,0.653,13797,2008584,0.988275762692,0.000166179984072,0.000530886216538,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.34","HP003",96.42,0.671,0.46,30614,2011808,0.00225033828416,0.000128323485968,0.998215925534,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.35","HP003",98.49,0.682,0.45,46742,2537174,0.999299851961,0.0028859002127,0.999155596342,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae_2","NA","NA"]
["HP003_bin.36","HP003",99.62,1.061,0.38,42559,2538074,0.0442107450329,0.996518056385,0.00775547211844,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Enterococcaceae","g__Enterococcus","s__Enterococcus_faecium"]
["HP003_bin.37","HP003",71.16,4.182,0.6,4497,1800850,0.927003820994,0.00433306445083,0.000843766941283,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Bifidobacteriales","f__Bifidobacteriaceae","g__Bifidobacterium","s__Bifidobacterium_longum"]
["HP003_bin.38","HP003",94.73,1.955,0.454,9614,4127821,0.646767812519,0.980552346053,0.0923522076307,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae","NA","NA"]
["HP003_bin.39","HP003",94.82,3.793,0.565,5570,2908885,0.352406775568,0.000478880251686,0.743735375432,"k__Bacteria","p__Synergistetes","c__Synergistia","o__Synergistales","f__Synergistaceae","NA","NA"]
["HP003_bin.4","HP003",93.22,1.685,0.469,10732,3924290,0.130736107103,0.432339968475,0.995399197501,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_uniformis"]
["HP003_bin.40","HP003",74.65,7.229,0.512,1948,3669569,0.325405921805,0.0003592774452,0.57273699179,"k__Bacteria","p__Proteobacteria","c__Gammaproteobacteria","o__Enterobacteriales","f__Enterobacteriaceae","NA","NA"]
["HP003_bin.41","HP003",81.81,2.539,0.625,4295,2882076,0.0607454237865,0.802816582814,0.0820414664548,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.42","HP003",72,1.586,0.277,34215,1438572,0.997007768727,0.00019300803015,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.43","HP003",79.72,6.344,0.633,5162,1839130,0.866797344126,0,0.000232895339839,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Bifidobacteriales","f__Bifidobacteriaceae","g__Bifidobacterium","NA"]
["HP003_bin.44","HP003",72.42,0.632,0.442,4113,2346969,0.133953464742,0.116269820089,0.718099375945,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae_2","g__Clostridium_2","NA"]
["HP003_bin.45","HP003",81.04,4.484,0.414,4956,1936209,0.946086569558,0.718441875801,0.118117138095,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP003_bin.46","HP003",82.22,1.253,0.421,5804,1888774,0.677638406572,0.893220327436,0.152847425444,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Dorea","s__Dorea_longicatena"]
["HP003_bin.47","HP003",71.54,0.561,0.265,16300,985842,0.98095280007,0,0,"k__Bacteria","NA","NA","NA","NA","NA","NA"]
["HP003_bin.48","HP003",87.54,4.585,0.48,3621,1914385,0.0159292918469,0.811341856382,0.0937673074642,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.49","HP003",76.15,2.951,0.482,2113,2120924,0.133564201494,0.488965918278,0.285305766368,"k__Bacteria","p__Proteobacteria","c__Betaproteobacteria","o__Burkholderiales","f__Sutterellaceae","g__Sutterella","NA"]
["HP003_bin.5","HP003",98.87,2.992,0.271,12619,2794798,0.992629989623,0.000137860173986,0.000248911359395,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae","g__Clostridium","NA"]
["HP003_bin.50","HP003",95.91,2.971,0.587,6460,2875186,0.349754468975,0,0.919325616016,"k__Bacteria","p__Verrucomicrobia","c__Verrucomicrobiae","o__Verrucomicrobiales","f__Verrucomicrobiaceae","NA","NA"]
["HP003_bin.51","HP003",79.66,4.293,0.573,4033,2288938,0.928591752904,0.0150019006541,0.953632926501,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.52","HP003",100,0.681,0.593,83200,2215099,0.99950165269,0.000653591964371,0.000981442566811,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Bifidobacteriales","f__Bifidobacteriaceae","g__Bifidobacterium","s__Bifidobacterium_adolescentis"]
["HP003_bin.53","HP003",99.51,0.498,0.422,43850,2304060,0.999260571487,0.000121461743754,0.00108709591596,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Lachnobacterium","NA"]
["HP003_bin.54","HP003",87.96,4.182,0.607,5065,2065600,0.952583291786,0,0.000340090956023,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.55","HP003",89.17,3.859,0.331,5848,2313727,0.848560430909,0,0.000121113700841,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.56","HP003",79.69,0,0.341,7043,1782473,0.870202765276,0.000163937104794,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.57","HP003",85.21,3.411,0.513,4642,2058384,0.846814896599,0.0307330519745,0.0710654986748,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.58","HP003",87.59,4.11,0.435,3682,2764372,0.194213077353,0.49188198096,0.50163822034,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae_2","g__Barnesiella","NA"]
["HP003_bin.59","HP003",90.82,5.668,0.583,3437,3196866,0.126111323393,0.489058573928,0.245155904156,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.6","HP003",85.79,4.573,0.475,7137,2814940,0.280510458026,0.120972231631,0.958469160862,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP003_bin.60","HP003",80.71,5.332,0.429,4766,2719295,0.378510520537,0.509206085547,0.479740019356,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP003_bin.61","HP003",72.89,3.253,0.451,3548,3219745,0.36441159296,0.656614914213,0.705747786338,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_thetaiotaomicron"]
["HP003_bin.62","HP003",83.18,8.395,0.455,6257,2322141,0.93830592602,0.861575450775,0.0104522854021,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP003_bin.63","HP003",86.32,4.239,0.618,3244,2377169,0.260258121988,0,0.704057854467,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.64","HP003",98.11,1.509,0.312,17226,3232423,0.00582854558011,0.981579634132,0.448169445045,"k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","g__Coprobacillus","NA"]
["HP003_bin.65","HP003",80.26,2.11,0.423,6554,3606332,0.941653655376,0.000104958742282,0,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_caccae"]
["HP003_bin.66","HP003",97.48,3.041,0.385,8004,2347332,0.97788464286,0.000196423660837,0.000280919253469,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.67","HP003",93.2,1.385,0.382,15207,2893529,0.922913313757,0.901616634729,0.716559087982,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.68","HP003",76.72,0,0.602,5198,1802231,0.952185726437,0,0,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","NA","NA"]
["HP003_bin.69","HP003",93.65,1.83,0.513,18586,3346623,0.995548247029,0.000172293754828,0.510624086447,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","NA","NA","NA"]
["HP003_bin.7","HP003",77.21,7.084,0.398,2878,1876080,0.0559759190132,0.697944083604,0.0286316826158,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Streptococcaceae","g__Streptococcus","NA"]
["HP003_bin.70","HP003",89.12,2.577,0.394,4134,1497323,0.0154441987381,0.855120866765,0.448300844546,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Streptococcaceae","g__Streptococcus","s__Streptococcus_thermophilus"]
["HP003_bin.71","HP003",84.56,2.631,0.298,7684,2226616,0.953942072885,0,0,"k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","NA","NA"]
["HP003_bin.72","HP003",77.25,5.606,0.619,2558,1941804,0.837407111177,0.000192538442225,0.552175806662,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.73","HP003",100,0,0.311,69835,1788473,0.998961568298,0.000358902100116,0.991065658849,"k__Archaea","p__Euryarchaeota","c__Methanobacteria","o__Methanobacteriales","f__Methanobacteriaceae","g__Methanobrevibacter","s__Methanobrevibacter_smithii"]
["HP003_bin.74","HP003",97.98,2.619,0.526,20489,3019424,0.0027415926179,0.000118260756869,0.979524898321,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.75","HP003",83.22,1.383,0.609,4295,1985415,0.776808461087,0.00254271161568,0.661630846553,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.76","HP003",86,3.494,0.437,3248,3062983,0.706436927403,0.511915909132,0.286490845995,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae","g__Odoribacter","NA"]
["HP003_bin.77","HP003",82.18,4.474,0.439,5441,2443998,0.817559359915,0.367508149375,0.117817466043,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.78","HP003",77.21,7.718,0.613,4342,1884844,0.934677328235,0.000142458289907,0.60899866483,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.79","HP003",79.52,1.418,0.481,3279,1585715,0.496650571871,0.281432377008,0.158570038189,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.8","HP003",91.3,3.042,0.532,3908,1938467,0.835946499847,0,0.67308474127,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.80","HP003",80.24,7.192,0.459,4997,4074308,0.628178017373,0.436739860815,0.69293476973,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae","g__Parabacteroides","s__Parabacteroides_merdae"]
["HP003_bin.81","HP003",81.44,3.719,0.433,4148,2429096,0.788137338761,0.000112369135069,0.521019077815,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Roseburia","NA"]
["HP003_bin.82","HP003",91.27,4.474,0.386,6169,2088354,0.700877722874,0.412972979597,0.440930054312,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP003_bin.83","HP003",75.13,2.764,0.59,2039,2716474,0.303094534427,0.000145706578455,0.108605546865,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.84","HP003",71.9,3.479,0.503,3697,2019569,0.621778605153,0,0.480776112385,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.85","HP003",74.74,1.981,0.579,2420,2414270,0.761265555382,0.000145288501453,0.0933703907137,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP003_bin.9","HP003",81.05,0.316,0.425,6893,1727555,0.827121141208,0.075586613191,0.618837646172,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP009_bin.1","HP009",74.14,5.274,0.458,3827,1848228,0.245357780301,0.48833515646,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP009_bin.10","HP009",84.33,2.542,0.602,4228,1878464,0.00192071916122,0.887808002219,"NA","k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Bifidobacteriales","f__Bifidobacteriaceae","g__Bifidobacterium","s__Bifidobacterium_longum"]
["HP009_bin.11","HP009",75.33,3.61,0.421,4806,1662111,0.110981683257,0.976450675334,"NA","k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Streptococcaceae","g__Streptococcus","s__Streptococcus_parasanguinis"]
["HP009_bin.12","HP009",70.84,2.586,0.539,3253,1544447,0.16377418576,0.629909921684,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP009_bin.13","HP009",91.62,3.669,0.401,10651,1940885,0.9180615024,0.0347389914787,"NA","k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Streptococcaceae","g__Streptococcus","s__Streptococcus_salivarius"]
["HP009_bin.14","HP009",74.53,4.049,0.595,3993,1573671,0.684869303317,0.000172431243042,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.15","HP009",91.05,3.807,0.331,7983,2540783,0.804154680356,0.000105510462394,"NA","k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","g__Solobacterium","NA"]
["HP009_bin.16","HP009",83.66,2.94,0.558,4931,2016231,0.241647106179,0.795155846631,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.17","HP009",99.32,3.02,0.407,170611,2222451,0.545462549139,0.991066788655,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP009_bin.18","HP009",96.37,3.027,0.436,13832,2879142,0.00168169880681,0.989298639515,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Ruminococcus","s__Ruminococcus_gnavus"]
["HP009_bin.19","HP009",82.85,3.365,0.555,3898,1687728,0.802036606012,0.270151530286,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Rikenellaceae","g__Alistipes","NA"]
["HP009_bin.2","HP009",97.83,4.222,0.442,9237,2010636,0.945830969506,0.0207078160199,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP009_bin.20","HP009",75.65,2.453,0.376,4392,1705088,0.541963522636,0.00915251955506,"NA","k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Lactobacillaceae","g__Lactobacillus","NA"]
["HP009_bin.21","HP009",70.67,8.103,0.511,3658,3429265,0.00707316468577,0.711717063933,"NA","k__Bacteria","p__Proteobacteria","c__Gammaproteobacteria","o__Enterobacteriales","f__Enterobacteriaceae","NA","NA"]
["HP009_bin.23","HP009",75.23,2.882,0.429,5534,2670344,0.842239450485,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Roseburia","NA"]
["HP009_bin.24","HP009",71.83,2.905,0.501,3041,1905081,0.353760919908,0.867959278868,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae_2","g__Clostridium_2","NA"]
["HP009_bin.25","HP009",75.03,1.983,0.479,2625,1595334,0.62451260205,0.0661272488095,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.27","HP009",80.51,4.108,0.577,2792,2133377,0.0550934656067,0.559758905684,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.28","HP009",76.29,9.547,0.312,2113,2538732,0.0043944785257,0.535455324775,"NA","k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","NA","NA"]
["HP009_bin.29","HP009",79.21,6.767,0.441,2628,2124252,0.143807977348,0.69499214696,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.3","HP009",80.7,6.431,0.439,2292,1957360,0,0.871270144656,"NA","k__Bacteria","p__Firmicutes","c__Negativicutes","o__Selenomonadales","f__Acidaminococcaceae","NA","NA"]
["HP009_bin.4","HP009",96.2,0,0.414,26705,3401606,0.399836200216,0.995153620948,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","s__Blautia_wexlerae"]
["HP009_bin.5","HP009",91.71,3.167,0.419,12959,2261175,0.301766336328,0.984985384867,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Dorea","s__Dorea_longicatena"]
["HP009_bin.6","HP009",79.72,0.559,0.453,4500,1794171,0.925627277639,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP009_bin.7","HP009",93.25,1.363,0.538,9069,1854952,0.829587515729,0.00248814176565,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP009_bin.8","HP009",88.33,2.303,0.324,6899,1745225,0.855555525661,0,"NA","k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Lactobacillaceae_3","g__Lactobacillus_3","s__Lactobacillus_salivarius"]
["HP009_bin.9","HP009",93.96,1.808,0.44,35334,2539735,0.884715195285,0.997815224903,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Lachnobacterium","NA"]
["HP010_bin.1","HP010",70.75,2.524,0.428,6136,3517528,0.0345993764862,0.959954813965,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_fragilis"]
["HP010_bin.10","HP010",80.64,5.165,0.48,4561,3007277,0.000442724769476,0.941501848693,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP010_bin.11","HP010",91.86,1.677,0.433,13657,2574503,0.870188529079,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.12","HP010",83.97,1.623,0.472,24879,3247486,0.645915932593,0.995170452697,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_stercoris"]
["HP010_bin.13","HP010",88.19,2.319,0.412,4660,1759225,0.544724170255,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP010_bin.14","HP010",82.49,6.859,0.603,7443,1903229,0.718005353322,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP010_bin.15","HP010",94.04,3.658,0.478,7392,2783203,0.884122631537,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP010_bin.16","HP010",72.38,3.579,0.265,15443,1534938,0.742096600918,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.17","HP010",92.27,2.801,0.422,12799,2296962,0.779534439385,0.000162096784249,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Lachnobacterium","NA"]
["HP010_bin.18","HP010",97.36,0.058,0.417,47633,2518176,0.0881654409385,0.99802206302,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Ruminococcus","NA"]
["HP010_bin.19","HP010",93.74,3.048,0.508,9796,4312178,0.109121033435,0.974519301429,"NA","k__Bacteria","p__Proteobacteria","c__Gammaproteobacteria","o__Enterobacteriales","f__Enterobacteriaceae","NA","NA"]
["HP010_bin.2","HP010",70.57,1.254,0.376,4175,1967820,0.53510589693,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae_2","g__Lachnospira","NA"]
["HP010_bin.20","HP010",81.53,1.724,0.427,15443,6044633,0.0695296863844,0.992381440925,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_thetaiotaomicron"]
["HP010_bin.21","HP010",72.5,1.511,0.601,3729,2385307,0.0483699934275,0.864689835082,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Rikenellaceae","g__Alistipes","NA"]
["HP010_bin.22","HP010",77.95,1.221,0.275,4122,960576,0.483469494837,0,"NA","k__Bacteria","NA","NA","NA","NA","NA","NA"]
["HP010_bin.23","HP010",71.45,2.633,0.623,2699,1484725,0.0478113265521,0.793774263082,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.25","HP010",97.95,2.551,0.588,20135,3110004,0.00494425812676,0.992189517447,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP010_bin.26","HP010",85.82,1.186,0.637,2666,2324568,0,0.849619779658,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP010_bin.27","HP010",84.03,3.397,0.455,5520,1590341,0.510399090519,0.000538426206189,"NA","k__Bacteria","p__Firmicutes","c__Negativicutes","o__Selenomonadales","f__Veillonellaceae","g__Dialister","NA"]
["HP010_bin.28","HP010",86.88,4.947,0.451,4128,3988719,0.200054069036,0.864002185796,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae","NA","NA"]
["HP010_bin.29","HP010",74.59,1.562,0.385,2332,1706548,0.0223420545856,0.554370050159,"NA","k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Enterococcaceae","g__Enterococcus","s__Enterococcus_faecium"]
["HP010_bin.3","HP010",94.93,0.632,0.44,58348,3110832,0.100601087755,0.999262247064,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae_2","g__Clostridium_2","NA"]
["HP010_bin.30","HP010",77.07,2.558,0.593,2426,2557025,0.00226769695683,0.763367734529,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.4","HP010",91.13,1.415,0.443,15122,3692195,0.000654139439836,0.989535032787,"NA","k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","g__Solobacterium","NA"]
["HP010_bin.5","HP010",93.51,0.371,0.453,31052,3282875,0.0124314851618,0.996022686235,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_eggerthii"]
["HP010_bin.6","HP010",92.87,1.515,0.585,7723,2731590,0.700425293931,0.000924498523773,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.7","HP010",88,1.006,0.471,8483,2393138,0.707423164928,0.000847355397919,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP010_bin.8","HP010",90.46,2.125,0.37,8139,2371018,0.677843635242,0,"NA","k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Ruminococcus","NA"]
["HP010_bin.9","HP010",82.82,0.851,0.447,6498,2825324,0.927536711563,0.000144834810467,"NA","k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","NA"]
["HP028_bin.1","HP028",90.89,0.335,0.385,7524,2189647,0.763108434702,0.281524740897,0.242535330481,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.10","HP028",70.87,7.802,0.467,19870,2092570,0.000300134616207,0,0.997563257817,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","g__Prevotella","NA"]
["HP028_bin.11","HP028",87.63,2.163,0.609,5610,2223946,0.307964728404,0.595134894064,0,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Rikenellaceae","g__Alistipes","NA"]
["HP028_bin.12","HP028",97.92,1.235,0.375,24707,2663412,0.615297911966,0.992545202275,0.00036383731144,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae_2","g__Lachnospira","NA"]
["HP028_bin.13","HP028",96.14,4.921,0.421,11095,2598610,0.00635955846245,0.981548282001,0.00233626934089,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae_2","g__Lachnospira","NA"]
["HP028_bin.14","HP028",75.61,4.226,0.575,2238,1937508,0.532194414569,0.796687448384,0.239983971616,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Faecalibacterium","NA"]
["HP028_bin.15","HP028",95.39,1.938,0.509,9521,4194595,0.000625694542434,0.737071155386,0.00162343160198,"k__Bacteria","p__Proteobacteria","c__Gammaproteobacteria","o__Enterobacteriales","f__Enterobacteriaceae","NA","NA"]
["HP028_bin.16","HP028",81.9,4.909,0.42,6318,3828105,0.380583302919,0.844868254774,0.00274130794234,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_caccae"]
["HP028_bin.17","HP028",70.54,0.671,0.575,5225,1409297,0.544516677854,0.255777582009,0.128155322816,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.18","HP028",79.78,0.167,0.401,3879,1800769,0.000676146502704,0.526758863825,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Ruminococcus","NA"]
["HP028_bin.19","HP028",92.43,2.908,0.559,7464,1976313,0.633865701423,0.257128663697,0.0168209035902,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.2","HP028",98.3,2.576,0.441,38171,2693779,0.00160223704355,0.00198855566995,0.997621060023,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP028_bin.20","HP028",94.67,5.117,0.608,9269,1966170,0.982875994565,0.654290786047,0.00220561579993,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.21","HP028",98.04,3.184,0.463,16514,4245502,0.241771072411,0.991082839239,0.00949259703415,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","NA"]
["HP028_bin.22","HP028",97.84,2.367,0.34,13793,2142581,0.991725529548,0,0.0750695284963,"k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","g__Solobacterium","NA"]
["HP028_bin.23","HP028",71.26,6.478,0.596,2161,1680648,0.120343347083,0.119532322868,0.818167510395,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.24","HP028",94.93,1.733,0.427,8127,2736685,0.538023349467,0.871002664708,0,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Ruminococcus","NA"]
["HP028_bin.25","HP028",85.46,4.194,0.386,4403,2442715,0.271739168763,0.272480357649,0.0334206626076,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.26","HP028",95.74,2.74,0.48,7771,1947207,0.0724251072159,0.692084000291,0.0868292034507,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.27","HP028",96.85,0.698,0.326,16573,1898780,0.874633770498,0.35641533644,0.000313378827142,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Lactobacillaceae_3","g__Lactobacillus_3","s__Lactobacillus_salivarius"]
["HP028_bin.28","HP028",99.32,0.671,0.373,67309,2454698,0.00372089313071,0.00320386742677,0.996939790349,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.29","HP028",96.64,1.677,0.364,21019,2080706,0.992170057307,0.981048243862,0.00106492237274,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.3","HP028",96.25,1.901,0.45,5561,2248721,0.439106435247,0,0.894615716879,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.30","HP028",97.53,2.348,0.375,28608,2002197,0,0,0.995530221765,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.31","HP028",75.05,2.483,0.54,3010,1619735,0.263627767634,0.2091042433,0.00053417556122,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.32","HP028",90.76,0.16,0.275,9564,1292871,0.895023572582,0.00063632394951,0,"k__Bacteria","NA","NA","NA","NA","NA","NA"]
["HP028_bin.33","HP028",78.06,3.166,0.606,2250,1706905,0.131450378751,0.767576293971,0.117767408539,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Faecalibacterium","NA"]
["HP028_bin.34","HP028",94.36,1.68,0.529,8334,1762642,0.922210237563,0.111362637084,0,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","NA","NA"]
["HP028_bin.35","HP028",93.34,1.679,0.497,3957,2210977,0.0599928222278,0.569272300035,0.349405410322,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae_2","g__Clostridium_2","NA"]
["HP028_bin.36","HP028",79.03,2.01,0.263,7828,1076254,0.677260683348,0,0.00022549576545,"k__Bacteria","p__Tenericutes","c__Mollicutes","NA","NA","NA","NA"]
["HP028_bin.37","HP028",92.57,4.994,0.461,18434,3215564,0.000293352874618,0.000323076796682,0.9941480298,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","g__Prevotella","NA"]
["HP028_bin.38","HP028",95.26,0.335,0.515,38678,2204120,0.979590932616,0.988978697558,0.000362592949542,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.39","HP028",97.82,2.028,0.414,18608,3239900,0.684473644972,0.986715592004,0.0160671641817,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Roseburia","NA"]
["HP028_bin.4","HP028",95.11,0.671,0.465,28819,2815138,0,0.000740418893341,0.99500037389,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.40","HP028",80.97,3.322,0.503,4012,2613751,0.0123621957393,0.413388513745,0.037129133688,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.41","HP028",90.98,2.848,0.445,7039,2382284,0.572217500509,0.719560884388,0.00146201345441,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP028_bin.42","HP028",81.98,6.133,0.429,2679,2883237,0.739271540416,0.42960482134,0.267456141453,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","s__Blautia_wexlerae"]
["HP028_bin.43","HP028",88.69,6.041,0.444,9375,2615661,0.000689417807921,0,0.952854262726,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP028_bin.44","HP028",74.55,1.74,0.495,4689,1658052,0.585660109898,0.124037813005,0.0605460037527,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP028_bin.45","HP028",74.92,0.862,0.456,4727,1914867,0,0.000172882935703,0.882077472994,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","NA","NA"]
["HP028_bin.46","HP028",94.12,2.988,0.42,8526,3527138,0.550772770491,0.967871779981,0.672999560946,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_vulgatus"]
["HP028_bin.47","HP028",89.58,4.142,0.554,5548,1833966,0.682484275036,0.849507662228,0,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Rikenellaceae","g__Alistipes","NA"]
["HP028_bin.48","HP028",96.63,2.056,0.436,29101,2841332,0.96286021975,0.996815367143,0.0836503098984,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Lachnobacterium","NA"]
["HP028_bin.49","HP028",84.26,4.43,0.443,7688,2590980,0.0603484528395,0.465568430105,0.711229381197,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Peptostreptococcaceae_2","g__Clostridium_2","NA"]
["HP028_bin.5","HP028",91.82,3.717,0.475,9269,3884825,0.170309854968,0.930420784802,0.147350725189,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_uniformis"]
["HP028_bin.50","HP028",95.01,2.036,0.403,6509,1820971,0.631976190651,0.193732176911,0,"k__Bacteria","p__Firmicutes","c__Bacilli","o__Lactobacillales","f__Lactobacillaceae_2","g__Lactobacillus_2","NA"]
["HP028_bin.51","HP028",89.28,2.013,0.532,13243,1812071,0,0.000166354447176,0.928738100293,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.52","HP028",98.63,1.454,0.421,13890,2506662,0,0.000101756274155,0.982926945649,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.53","HP028",93.04,4.437,0.608,4793,2312633,0.802213350931,0.512052421308,0.00590221167978,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.54","HP028",85.34,3.61,0.376,3988,1976125,0.820009195175,0.249298367954,0.126474184179,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.55","HP028",89.03,3.904,0.453,4715,2362165,0,0.000119549286605,0.959605350733,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","g__Prevotella","NA"]
["HP028_bin.56","HP028",70.12,4.464,0.601,4492,2437555,0.689985534285,0.812723880418,0.0343401824468,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Faecalibacterium","NA"]
["HP028_bin.57","HP028",92.47,6.198,0.428,11746,2513671,0.891185689111,0.267924176437,0.0771454870791,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP028_bin.58","HP028",87.97,1.616,0.486,11262,2739851,0,0.000335279690684,0.983902397895,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","g__Prevotella","NA"]
["HP028_bin.59","HP028",93.22,7.246,0.637,4508,2779313,0.541472908492,0.150895317068,0.130875141835,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","NA","NA"]
["HP028_bin.6","HP028",75.54,2.069,0.491,4664,2073524,0.635219186569,0.43025865652,0.0333659103576,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","NA","NA"]
["HP028_bin.60","HP028",76.96,1.303,0.588,4488,2235256,0.610304000749,0.095939883103,0.00740481970836,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.61","HP028",97.61,2.947,0.564,6731,2524768,0.776770323137,0.223965707051,0.73371356534,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.62","HP028",97.31,0.335,0.413,76605,2563169,0.000102262810879,0.000108989288754,0.999241934184,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.63","HP028",97.06,3.055,0.42,16699,2623897,0.978312414118,0.326973993432,0.0335137077072,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Lachnobacterium","NA"]
["HP028_bin.64","HP028",84.2,3.51,0.597,2640,1717510,0.161433126347,0.563379092645,0.377835543811,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.65","HP028",98.03,4.088,0.291,6770,2519130,0.39597416958,0.237889045483,0.131326499303,"k__Bacteria","p__Tenericutes","c__Mollicutes","o__Erysipelotrichales","f__Erysipelotrichaceae","NA","NA"]
["HP028_bin.66","HP028",95.74,0,0.445,70974,2163965,0,0,0.998253252806,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.67","HP028",74.81,8.352,0.397,1869,1519250,0.118583660409,0.277949643932,0.00125200482375,"k__Bacteria","p__Proteobacteria","c__Gammaproteobacteria","o__Pasteurellales","f__Pasteurellaceae","g__Haemophilus","s__Haemophilus_parainfluenzae"]
["HP028_bin.68","HP028",76.49,1.665,0.386,3746,2158721,0.422027805168,0.212983708051,0.000621391703011,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Lachnospiraceae","g__Blautia","NA"]
["HP028_bin.69","HP028",81.08,5.36,0.611,3495,1669417,0.0298438141977,0.458033535282,0.101924075958,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.7","HP028",92.49,1.069,0.479,11631,2703093,0.000183677453615,0.000205781303402,0.949161507101,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","NA","NA","NA"]
["HP028_bin.70","HP028",80.36,6.431,0.602,3094,2037280,0.109975872846,0.0697202933716,0.294146974655,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.71","HP028",74.5,1.531,0.449,2683,1449022,0.620605896231,0.000185085384243,0.00101937420663,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","NA","NA"]
["HP028_bin.72","HP028",71.48,3.024,0.454,2493,3342094,0.0867703263123,0.527347571147,9.61058537332E-005,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Porphyromonadaceae","NA","NA"]
["HP028_bin.73","HP028",79.64,5.807,0.469,5451,3326262,0.105234041947,0.855876408372,0.00025384943768,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Bacteroidaceae","g__Bacteroides","s__Bacteroides_stercoris"]
["HP028_bin.74","HP028",85.59,2.013,0.411,3579,2205037,0.0396152230869,0.134524507613,0.534235825858,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","NA","NA","NA"]
["HP028_bin.75","HP028",74.7,4.043,0.502,3206,2298294,0.000198991342246,0.000123384006023,0.828948513899,"k__Bacteria","p__Bacteroidetes","c__Bacteroidia","o__Bacteroidales","f__Prevotellaceae","g__Prevotella","NA"]
["HP028_bin.8","HP028",79.89,2.937,0.606,4960,1518976,0.652347725626,0.307220050387,0.00239496212377,"k__Bacteria","p__Actinobacteria","c__Actinobacteria","o__Coriobacteriales","f__Coriobacteriaceae","NA","NA"]
["HP028_bin.9","HP028",91.48,1.123,0.455,6770,2287889,0.0016546167912,0,0.94128969689,"k__Bacteria","p__Firmicutes","c__Clostridia","o__Clostridiales","f__Ruminococcaceae","g__Ruminococcus","NA"]