Species,Stage,Replicate,Input reads (M),Uniquely mapped reads (M),Uniquely mapped reads in genes (M),Unique mapping % Oryza rufipogon,IM,1,56.5,45.8,33.5,81.06 Oryza rufipogon,IM,2,40.3,18.5,13.6,46.06 Oryza rufipogon,IM,3,49.9,42.3,30.4,84.78 Oryza rufipogon,DM,1,44.9,37.1,28,82.63 Oryza rufipogon,DM,2,58.1,49.6,38,85.34 Oryza rufipogon,DM,3,40.1,33.8,23.1,84.24 Oryza sativa indica,IM,1,49.7,33,24.4,66.33 Oryza sativa indica,IM,2,74.4,43.7,29.7,58.79 Oryza sativa indica,IM,3,48.4,36.9,27.7,76.25 Oryza sativa indica,DM,1,46.7,31,23.7,66.54 Oryza sativa indica,DM,2,21.4,18.1,12.1,84.52 Oryza sativa indica,DM,3,37.4,30.8,21.9,82.32 Oryza barthii,IM,1,66.2,45.6,33.1,68.92 Oryza barthii,IM,2,41.6,25.2,18.2,60.65 Oryza barthii,IM,3,47,30.6,23.4,65.01 Oryza barthii,DM,1,41.3,25.4,18,61.59 Oryza barthii,DM,2,43.1,29.9,22.9,69.46 Oryza barthii,DM,3,29.9,18.9,13.7,63.17 Oryza glaberrima,IM,1,71.6,42.1,30.8,58.74 Oryza glaberrima,IM,2,46.6,27,20.2,57.88 Oryza glaberrima,IM,3,42.4,24.8,18.2,58.51 Oryza glaberrima,DM,1,50.4,32,23.8,63.49 Oryza glaberrima,DM,2,41.6,20.1,13.9,48.18 Oryza glaberrima,DM,3,51.9,32.4,23.7,62.28