Chromosome,Position,Reference,Variant,Gene.ID,Product,Strand,Reference.codon,Variant.codon,Reference.AA,Variant.AA,Codon.position,C1.10,C2.10,C3.10,C4.10,C5.10,E1.10,E2.10,E3.10,E4.10,E5.10,C1.5,C2.5,C3.5,C4.5,C5.5,E1.5,E2.5,E3.5,E4.5,E5.5
NC_002953.3,10884,G,A,,,0,,,,,-1,0,0,0,0,0,0,0.325,0,0,0,0,0,0,0,0,0,0.65,0,0,0
NC_002953.3,59573,C,A,SAS_RS00235,transposase,-1,ACA,AAA,T,K,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1,0,0,0,0,0
NC_002953.3,135427,C,T,SAS_RS00600,hypothetical protein,1,CGA,TGA,R,*,1,0,0.975,0,0,0,0,0,0,0,0,0,0.675,0,0,0,0,0,0,0,0
NC_002953.3,203056,C,G,,,0,,,,,-1,0,0,0.175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,292191,G,A,SAS_RS01275,ribose transporter RbsU,-1,GAA,AAA,E,K,1,0,0,0,0,0,0,0.35,0,0,0,0,0,0,0,0,0,0.2,0,0,0
NC_002953.3,307388,A,ATTAATTGTCGGT,SAS_RS01340,protein EsaA,1,GGA,-,G,-,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25,0,0,0,0,0
NC_002953.3,423924,G,A,,,0,,,,,-1,0,0,0,0,0,0.075,0,0,0,0,0,0,0,0,0,0,0,0,0.425,0
NC_002953.3,425660,T,C,SAS_RS01965,nuclease,1,TCA,CCA,S,P,1,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,549806,A,G,,,0,,,,,-1,0,1,0,0,0,0,0,0,0,0,0,0.7,0,0,0,0,0,0,0,0
NC_002953.3,574305,G,A,SAS_RS02720,DNA-directed RNA polymerase subunit beta,1,GGT,GAT,G,D,2,0,0,0,0,0.175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,606165,A,G,SAS_RS02825,glycosyl transferase family 1,1,AAT,AGT,N,S,2,0,0.3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,613323,A,AT,,,0,,,,,-1,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15,0,0,0,0,0,0
NC_002953.3,621623,G,A,SAS_RS02905,uracil-DNA glycosylase,1,GCG,GCA,A,A,3,0,1,0,0,0,0,0,0,0,0,0,0.675,0,0,0,0,0,0,0,0
NC_002953.3,626196,GA,G,,,0,,,,,-1,0,0,0,0,0,0,0,0.25,0,0,0,0,0,0,0,0,0,0.4,0,0
NC_002953.3,627445,A,T,,,0,,,,,-1,0,0,0,0,0,0,0,0,0,0,0,0.15,0,0,0,0,0,0,0,0
NC_002953.3,629811,G,T,,,0,,,,,-1,0,0,0.95,0,0,0,0,0,0,0,0,0,0.125,0,0,0,0,0,0,0
NC_002953.3,692784,G,A,SAS_RS03290,ferrichrome ABC transporter permease,1,GCT,ACT,A,T,1,0,0,0,0,0,0,0.275,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,697673,G,T,SAS_RS03320,membrane protein,1,GCT,TCT,A,S,1,0,0,0,0,0.925,0,0,0,0,0,0,0,0,0,0.625,0,0,0,0,0
NC_002953.3,733955,G,A,SAS_RS03515,membrane protein,1,GGC,GAC,G,D,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075,0,0,0
NC_002953.3,739478,G,A,SAS_RS03545,uncharacterized protein,1,ACG,ACA,T,T,3,0,0,0,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,797809,C,T,SAS_RS03845,helicase,1,CAA,TAA,Q,*,1,0,0,0,0,0,0,0.3,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,848832,T,G,SAS_RS04065,thermonuclease,1,GGT,GGG,G,G,3,0,0,0,0,0,0,0.25,0,0,0,0,0,0,0,0,0,0.2,0,0,0
NC_002953.3,862180,T,TGG,SAS_RS04175,methionine import ATP-binding protein MetN 2,1,TTC,-,F,-,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075,0
NC_002953.3,868946,G,A,SAS_RS04210,cysteine desulfurase,1,GCT,ACT,A,T,1,0,0.225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,875238,A,T,SAS_RS04245,hypothetical protein,1,GAC,GTC,D,V,2,0,0,0.15,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1034531,ATTAT,A,SAS_RS05095,hypothetical protein,1,TCA,-,S,-,3,0,0,0,0,0,0,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0
NC_002953.3,1101366,C,T,SAS_RS05445,pyruvate dehydrogenase E1 component subunit alpha,1,TAC,TAT,Y,Y,3,0,0,0,0,0,0,0,0.1,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1136694,C,T,SAS_RS05630,iron-regulated surface determinant protein B,-1,TGC,TGT,C,C,3,0.075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1140755,A,T,SAS_RS05650,heme uptake system protein IsdE,1,GAA,GTA,E,V,2,0,0,0,0,0,0,0,0.275,0,0,0,0,0,0,0,0,0,0.4,0,0
NC_002953.3,1148196,A,T,,,0,,,,,-1,0,0,0,0,0,0,0,0.175,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1169390,T,C,SAS_RS05825,alpha-hemolysin,-1,TCC,CCC,S,P,1,0,0,0,0.1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1187071,G,T,SAS_RS05930,penicillin-binding protein,1,GGT,TGT,G,C,1,0,0,0.425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1222841,T,A,SAS_RS06085,primosomal protein N,1,ATT,AAT,I,N,2,0,0,0,0,0,0,0,0,0,0,0,0,0.2,0,0,0,0,0,0,0
NC_002953.3,1267927,G,T,,,0,,,,,-1,0,0,0.3,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1280122,C,G,SAS_RS06355,RIP metalloprotease RseP,1,CCA,GCA,P,A,1,0,0,0,0,0,0.275,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1332868,T,G,SAS_RS06570,GTPase HflX,1,GTT,GGT,V,G,2,0,0,0,0,0,0,0,0.075,0,0,0,0,0,0,0,0,0,0.075,0,0
NC_002953.3,1380051,A,C,SAS_RS06840,aconitate hydratase,1,GAT,GCT,D,A,2,0,0,0,0,0,0,0,0,0,0,0,0.15,0,0,0,0,0,0,0,0
NC_002953.3,1477356,G,A,SAS_RS07310,matrix-binding protein,-1,CGT,CAT,R,H,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075,0,0,0,0,0,0
NC_002953.3,1508098,C,G,SAS_RS07345,sulfite reductase subunit alpha,1,ACT,AGT,T,S,2,0,0,0.975,0,0,0,0,0,0,0,0,0,0.075,0,0,0,0,0,0,0
NC_002953.3,1512778,T,A,SAS_RS07380,hypothetical protein,-1,TTC,TAC,F,Y,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225,0,0,0,0,0
NC_002953.3,1839866,T,G,,,0,,,,,-1,0,0,0.275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1886279,T,C,,,0,,,,,-1,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1892242,T,A,,,0,,,,,-1,0,0.15,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,1914095,G,A,SAS_RS09425,foldase,1,GTA,ATA,V,I,1,0.95,0,0,0,0,0,0,0,0,0,0.625,0,0,0,0,0,0,0,0,0
NC_002953.3,1923186,C,A,SAS_RS09460,transcriptional regulator,-1,CGC,CGA,R,R,3,0,0,0,0,0,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0,0
NC_002953.3,1945482,C,G,SAS_RS09685,2-hydroxyacid dehydrogenase,-1,CTT,GTT,L,V,1,0,0,0,0,0,0.5,0,0,0,0,0,0,0,0,0,0.675,0,0,0,0
NC_002953.3,1985301,T,A,,,0,,,,,-1,0,0,0,0,0,0,0,0.325,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2004992,G,A,,,0,,,,,-1,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325,0,0,0,0,0,0
NC_002953.3,2200113,G,A,SAS_RS11115,uncharacterized protein,-1,GCT,ACT,A,T,1,0,0,0,0,0,0,0,0.375,0,0,0,0,0,0,0,0,0,0.4,0,0
NC_002953.3,2208902,AC,A,,,0,,,,,-1,0,0,0,0,0,0,0,0,0,0,0.125,0,0,0,0,0,0,0,0,0
NC_002953.3,2223288,C,T,SAS_RS11185,methicillin resistance protein FmtB,-1,ACC,ATC,T,I,2,0,0,0.425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2232539,G,A,,,0,,,,,-1,0,0,0,0,0,0,0,0,0,0,0,0,0.825,0,0,0,0,0,0,0
NC_002953.3,2338045,G,C,SAS_RS11875,urease accessory protein,1,CGT,CCT,R,P,2,0,0,0,0,0,0,0,0,0.1,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2362203,T,A,SAS_RS12000,RpiR family transcriptional regulator,1,TTT,TTA,F,L,3,0,0,0,0,0,0,0,0,0,0.225,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2379210,G,T,SAS_RS12080,urocanate hydratase,-1,TGC,TTC,C,F,2,0,0,0,0,0,0,0,0,0,0,0,0.1,0,0,0,0,0,0,0,0
NC_002953.3,2407915,G,A,SAS_RS12235,DNA-binding response regulator,1,GAA,AAA,E,K,1,0,0,0,0,0,0,0,0.325,0,0,0,0,0,0,0,0,0,0.45,0,0
NC_002953.3,2412116,C,A,SAS_RS12255,malate:quinone oxidoreductase,-1,CAC,CAA,H,Q,3,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375,0,0,0,0,0,0
NC_002953.3,2474326,G,A,SAS_RS12570,hypothetical protein,-1,TAG,TAA,*,*,3,0,0,0,0,0,0,0,0,0,0,0.35,0,0,0,0,0,0,0,0,0
NC_002953.3,2485521,C,T,SAS_RS12635,glycerate kinase,1,ACC,ATC,T,I,2,0,0,0,0,0.25,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2553454,C,A,SAS_RS12975,accumulation-associated protein,-1,CGG,AGG,R,R,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3,0,0,0,0,0,0
NC_002953.3,2597224,C,T,,,0,,,,,-1,0,0,0,0,0,0.15,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2602946,G,T,SAS_RS13205,holin-like protein CidB,-1,GCC,TCC,A,S,1,0,0.975,0,0,0,0,0,0,0,0,0,0.75,0,0,0,0,0,0,0,0
NC_002953.3,2623997,G,A,,,0,,,,,-1,0,0,0.125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2632830,G,C,SAS_RS13340,CHAP domain-containing protein,-1,TGC,TCC,C,S,2,0,0,0.2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2641524,A,G,SAS_RS13390,glyoxalase,-1,ATC,GTC,I,V,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075,0,0,0,0,0,0
NC_002953.3,2667682,G,C,,,0,,,,,-1,0.1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2682764,G,C,SAS_RS13620,anaerobic ribonucleoside-triphosphate reductase activating protein,-1,TGA,TCA,*,S,2,0,0,0,0.8,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2691066,G,T,SAS_RS13665,hypothetical protein,1,TTG,TTT,L,F,3,0,0,0.55,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
NC_002953.3,2701801,C,A,SAS_RS13715,clumping factor B,-1,ATC,ATA,I,I,3,0,0,0,0,0,0,0,0,0,0,0.275,0,0,0,0,0,0,0,0,0
NC_002953.3,2725891,G,A,SAS_RS13800,hypothetical protein,-1,AGC,AAC,S,N,2,0,0,0,0,0,0,0,0.3,0,0,0,0,0,0,0,0,0,0.375,0,0
NC_002953.3,2727708,G,A,SAS_RS13810,accessory Sec system glycosyltransferase GtfA,-1,GGT,GAT,G,D,2,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225,0,0,0,0,0