Sanderson et al.—American Journal of Botany 2019– Appendix S9.,,,,,, "Appendix S9. List of genes with significant differences in cold responsive expression between SW and NIL R38 (P value < 0.05), and which are also in Table S1. F, PValue, and FDR refer to the significance test of the interaction term.",,,,,, Gene,Alias,logFC,logCPM,F,PValue,FDR AT1G01470,LEA14,-0.638319444,6.777371625,15.67818221,0.001317701,0.553714808 AT1G09350,GolS3,-2.527226709,6.626307767,163.7510313,2.44E-09,4.81E-05 AT1G10070,BCAT-2,0.841537772,5.582208924,14.06472906,0.002009058,0.620027948 AT1G15960,NRAMP6,0.684395049,2.907753767,8.193093971,0.012109629,0.999935384 AT1G20440,COR47,-0.725917745,8.872650738,10.66918926,0.005356879,0.92988083 AT1G20450,ERD10,-0.758687175,8.376460021,13.69053774,0.002223783,0.620027948 AT1G31690,NA,-0.796764374,6.140892181,9.106349501,0.008859996,0.99597714 AT1G32080,NA,-0.406684018,7.584655046,5.314244999,0.036264686,0.999935384 AT1G47710,NA,-0.579385418,5.369866204,10.42222161,0.00578609,0.963923531 AT1G56500,NA,-0.345045194,6.916665842,6.520669545,0.022373913,0.999935384 AT1G67850,NA,-0.338354308,5.197958915,4.585323094,0.049527235,0.999935384 AT2G15970,COR413-PM1,-0.646569997,7.932401445,13.4104064,0.002401765,0.641011656 AT2G17840,ERD7,-0.570211897,6.370588536,9.493811277,0.007793344,0.99597714 AT2G19310,NA,-0.469166412,4.350299962,4.579596004,0.049652001,0.999935384 AT2G22500,UCP5,0.557881324,4.73857646,12.21511203,0.003369044,0.792126454 AT2G23340,DEAR3,-0.674988264,4.13711855,8.846517555,0.009669363,0.999935384 AT2G26695,NA,0.997087213,3.171060731,13.12934555,0.002596893,0.666086173 AT2G46710,NA,0.386394326,5.095122421,6.51973497,0.022381969,0.999935384 AT3G05660,RLP33,-1.315083265,2.703711201,13.43175401,0.002387643,0.641011656 AT3G13730,CYP90D1,0.577234875,3.768485918,8.169785513,0.012208974,0.999935384 AT3G20080,CYP705A15,0.602152006,5.085581132,9.441160687,0.007929248,0.99597714 AT3G46490,NA,-0.706470474,4.895701535,6.359171441,0.023817248,0.999935384 AT3G47430,PEX11B,-0.518468859,5.000776745,6.112588803,0.026234535,0.999935384 AT3G50970,LTI30,-0.805385293,7.498427581,9.434168209,0.007947501,0.99597714 AT3G55760,NA,-1.133478904,5.463980259,49.218705,4.80E-06,0.047443274 AT4G15130,CCT2,-0.565317595,4.932368806,10.03465738,0.00654168,0.99597714 AT4G18970,NA,0.760145739,5.43409061,20.41553365,4.34E-04,0.357174523 AT4G19500,NA,0.807684571,4.702764667,10.31049224,0.00599313,0.978217539 AT4G19530,NA,0.787569314,5.399299823,11.74938994,0.003861617,0.835669376 AT4G19630,NA,-3.893350782,0.953789605,26.76198832,1.23E-04,0.173634666 AT4G21326,SBT3.12,1.026825281,4.709017151,38.91350789,1.78E-05,0.070475647 AT4G27040,VPS22,0.924675343,5.58960694,31.57793125,5.38E-05,0.118011957 AT4G30650,NA,-1.66386831,7.478731804,43.43632582,9.74E-06,0.048098887 AT4G30830,NA,-1.016017014,3.902672778,6.742112468,0.02055634,0.999935384 AT4G33360,FLDH,1.36446582,4.403238885,43.87382455,9.21E-06,0.048098887 AT4G34950,NA,-0.415308832,6.864809205,9.107913797,0.008855365,0.99597714 AT4G36280,NA,1.07707018,3.074794221,23.80688462,2.15E-04,0.250205457 AT4G37310,CYP81H1,0.363050503,5.417888028,4.716131526,0.04677526,0.999935384 AT5G15960,KIN1,-1.30004733,8.364077596,11.8886103,0.003706217,0.835669376 AT5G17040,NA,0.948977571,2.637908895,11.72227987,0.003892738,0.835669376 AT5G25110,CIPK25,-1.222161367,6.123537334,30.73826624,6.17E-05,0.121891766 AT5G48070,XTH20,-0.429809908,5.926917855,4.651265407,0.048116859,0.999935384 AT5G54960,PDC2,0.460822272,7.013774979,6.58196679,0.021852803,0.999935384