Organism TaxID BioProject Accession BioProject ID Assembly Accession WGS Scaffolds Genes Proteins Release Date Modify Date Status Center BioSample Accession Takifugu rubripes 31033 PRJNA1434 1434 GCA_000180615.2 CAAB02 7091 23164 31052 22/08/2002 12/07/2011 Chromosome The Fugu Genome Sequencing Consortium SAMEA3138310 Xenopus tropicalis 8364 PRJNA12348 12348 GCA_000004195.3 AAMC03 6822 26496 39715 13/11/2009 13/07/2016 Chromosome DOE Joint Genome Institute SAMN00000117 Xenopus laevis 8355 PRJNA338693 338693 GCA_001663975.1 LYTH01 108033 36776 56817 14/06/2016 21/09/2016 Chromosome NCBI SAMN04518361 Meleagris gallopavo 9103 PRJNA42129 42129 GCA_000146605.3 ADDD02 233806 26366 33329 07/09/2010 24/11/2014 Chromosome Turkey Genome Consortium SAMN02981253 Struthio camelus australis 441894 PRJNA263340 263340 GCA_000698965.1 JJRT01 6915 16560 25438 06/05/2014 17/11/2016 Scaffold NCBI SAMN02316164 Ciconia boyciana 52775 PRJDB4709 327649 GCA_002002965.1 BDFF01 505419 - - 01/07/2016 01/07/2016 Scaffold Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies SAMD00050841 Gasterosteus aculeatus 69293 PRJNA13579 13579 GCA_000180675.1 AANH01 16957 - - 01/02/2006 11/08/2014 Contig Broad Institute SAMN02981227 Tetraodon nigroviridis 99883 PRJNA12350 12350 GCA_000180735.1 CAAE01 25773 27918 27918 14/05/2004 30/01/2015 Scaffold Genoscope SAMEA3138311 Ictalurus punctatus 7998 PRJNA327588 327588 GCA_001660625.1 LBML01 9975 27156 47978 09/06/2016 21/06/2016 Chromosome NCBI SAMN03486842 Monodelphis domestica 13616 PRJNA12561 12561 GCF_000002295.2 AAFR03 5223 37096 49112 08/11/2004 06/08/2014 Chromosome The Genome Sequencing Platform, The Genome Assembly Team SAMN02953611 Loxodonta africana 9785 PRJNA12569 12569 GCA_000001905.1 AAGU03 2352 25649 29784 18/05/2005 06/08/2014 Scaffold Broad Institute SAMN02953622 Notamacropus eugenii 9315 PRJNA12587 12587 GCA_000004035.1 ABQO01 277711 - - 26/11/2008 26/08/2014 Scaffold Tammar Wallaby Genome Sequencing Consortium - Echinops telfairi 9371 PRJNA12590 12590 GCA_000313985.1 AAIY02 8402 25811 22926 16/08/2005 06/11/2013 Scaffold Broad Institute SAMN00216137 Dasypus novemcinctus 9361 PRJNA196486 196486 GCA_000208655.2 AAGV03 46559 34097 38202 14/05/2005 06/08/2014 Scaffold NCBI SAMN02953623 Cavia porcellus 10141 PRJNA12583 12583 GCA_000151735.1 AAKN02 3144 27805 37720 04/11/2005 11/08/2014 Scaffold The Genome Sequencing Platform, The Genome Assembly Team SAMN02981223 Sorex araneus 42254 PRJNA13689 13689 GCA_000181275.2 AALT02 12845 21961 23427 05/11/2005 01/11/2013 Scaffold Broad Institute SAMN00210854 Oryctolagus cuniculus 9986 PRJNA12819 12819 GCA_000003625.1 AAGW02 3318 29098 38463 13/05/2005 06/08/2014 Chromosome The Genome Sequencing Platform, The Assembly Computation and Development Core Team SAMN02953624 Salmo salar 8030 PRJNA287919 287919 GCA_000233375.4 AGKD04 241573 59213 97738 25/10/2011 11/06/2015 Chromosome NCBI SAMN02749551 Papio anubis 9555 PRJNA54005 54005 GCA_000264685.2 AHZZ02 71135 35218 66659 30/05/2012 20/04/2017 Chromosome Baylor College of Medicine SAMN02981400 Otolemur garnettii 30611 PRJNA16955 16955 GCA_000181295.3 AAQR03 7793 25777 26925 02/06/2006 11/08/2014 Scaffold Broad Institute SAMN02981229 Tupaia belangeri 37347 PRJNA13971 13971 GCA_000181375.1 AAPY01 841006 - - 08/06/2006 26/08/2014 Contig Broad Institute SAMN03004381 Nomascus leucogenys 61853 PRJNA13975 13975 GCA_000146795.3 ADFV01 17524 28462 38654 31/08/2010 05/09/2014 Chromosome Gibbon Genome Sequencing Consortium SAMN02981257 Myotis lucifugus 59463 PRJNA16951 16951 GCA_000147115.1 AAPE02 11654 29200 41184 01/06/2006 06/08/2014 Scaffold Broad Institute SAMN02953645 Callorhinchus milii 7868 PRJNA18361 18361 GCA_000165045.2 AAVX02 21204 33094 28237 05/01/2007 20/12/2013 Scaffold Institute of Molecular and Cell Biology, Singapore SAMN00000800 Anolis carolinensis 28377 PRJNA18787 18787 GCA_000090745.2 AAWZ02 6646 22092 34827 15/02/2007 11/08/2014 Chromosome Broad Institute SAMN02981230 Fundulus heteroclitus 8078 PRJNA286680 286680 GCA_000826765.1 JXMV01 10180 25849 38234 20/01/2015 21/01/2015 Scaffold NCBI SAMN03277211 Pteropus vampyrus 132908 PRJNA20325 20325 GCA_000151845.2 ABRP02 36094 23423 33311 12/09/2008 05/12/2014 Scaffold Baylor College of Medicine SAMN02894360 Dipodomys ordii 10020 PRJNA20385 20385 GCA_000151885.2 ABRO02 65193 23266 29351 18/09/2008 12/12/2014 Scaffold Baylor College of Medicine SAMN02900551 Microcebus murinus 30608 PRJNA19967 19967 GCA_000165445.3 ABDC03 7678 31854 59023 20/07/2007 06/02/2017 Chromosome Broad Institute SAMN06275470 Galeopterus variegatus 482537 PRJNA20511 20511 GCA_000696425.1 JMZW01 179514 28608 32104 23/05/2014 05/06/2014 Scaffold Washington University (WashU) SAMN01758971 Vicugna pacos 30538 PRJNA30567 30567 GCA_000164845.3 ABRR02 276725 24553 33208 24/09/2008 04/08/2014 Scaffold Washington University (WashU) SAMN01096418 Choloepus hoffmanni 9358 PRJNA30809 30809 GCA_000164785.2 ABVD02 269084 - - 15/09/2008 30/09/2014 Scaffold Broad Institute SAMN02146716 Gadus morhua 8049 PRJNA41391 41391 GCA_000231765.1 CAEA01 427427 - - 25/08/2011 25/06/2016 Scaffold Genofisk SAMEA3138401 Haplochromis burtoni 8153 PRJNA60363 60363 GCA_000239415.1 AFNZ01 8001 26625 44653 20/12/2011 28/04/2015 Scaffold Broad Institute SAMN00139641 Neolamprologus brichardi 32507 PRJNA60365 60365 GCA_000239395.1 AFNY01 9099 25031 31372 20/12/2011 28/04/2015 Scaffold Broad Institute SAMN00139653 Pundamilia nyererei 303518 PRJNA60367 60367 GCA_000239375.1 AFNX01 7236 24446 38583 20/12/2011 28/04/2015 Scaffold Broad Institute SAMN00149614 Odocoileus virginianus texanus 9880 PRJNA384059 384059 GCA_002102435.1 MLBE01 17026 30534 48221 20/04/2017 20/04/2017 Scaffold NCBI SAMN05363940 Saimiri boliviensis boliviensis 39432 PRJNA67945 67945 GCA_000235385.1 AGCE01 2686 27316 36241 10/11/2011 11/08/2014 Scaffold Broad Institute SAMN02981369 Equus asinus 9793 PRJNA304024 304024 GCA_001305755.1 JREZ01 2167 27227 42247 02/10/2015 02/10/2015 Scaffold NCBI SAMN03010633 Mola mola 94237 PRJNA305960 305960 GCA_001698575.1 MBDK01 5552 - - 03/08/2016 08/08/2016 Scaffold BGI-shenzhen SAMN04335856 Gavia stellata 37040 PRJNA261843 261843 GCA_000690875.1 JJRM01 61831 14770 15697 03/05/2014 17/11/2016 Scaffold NCBI SAMN02324832 Rousettus aegyptiacus 9407 PRJNA309421 309421 GCA_001466805.2 LOCP02 2490 24986 48803 15/12/2015 17/03/2016 Scaffold NCBI SAMN04287759 Nipponia nippon 128390 PRJNA253829 253829 GCA_000708225.1 JMFH01 59555 15343 17089 09/05/2014 17/11/2016 Scaffold NCBI SAMN02596464 Podiceps cristatus 345573 PRJNA212905 212905 GCA_000699545.1 JMFS01 82923 12155 11707 07/05/2014 17/11/2016 Scaffold BGI SAMN02339891 Nasalis larvatus 43780 PRJNA241312 241312 GCA_000772465.1 JMHX01 319549 - - 30/10/2014 10/11/2014 Chromosome Proboscis Monkey Functional Genome Consortium SAMN02689222 Rhinopithecus roxellana 61622 PRJNA266995 266995 GCA_000769185.1 JABR01 135512 28766 37291 24/10/2014 28/10/2014 Scaffold NCBI SAMN02427086 Neomonachus schauinslandi 29088 PRJNA392091 392091 GCA_002201575.1 NINY01 7873 24618 28381 20/06/2017 20/06/2017 Scaffold NCBI SAMN06841387 Ammotragus lervia 9899 PRJNA361449 361449 GCA_002201775.1 NIVO01 77320 - - 20/06/2017 20/06/2017 Scaffold Northwest A&F University SAMN06233879 Enhydra lutris kenyoni 391180 PRJNA407952 407952 GCA_002288905.2 NSES01 6771 23943 36603 11/09/2017 15/09/2017 Scaffold NCBI SAMN07211055 Panthera pardus 9691 PRJNA355165 355165 GCA_001857705.1 LQGZ01 50377 33968 57954 24/08/2016 16/11/2016 Scaffold NCBI SAMN04347630 Gallirallus okinawae 547194 PRJDB4707 327647 GCA_002003005.1 BDFH01 768680 - - 01/07/2016 01/07/2016 Contig Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies SAMD00050839 Bison bison bison 43346 PRJNA266339 266339 GCA_000754665.1 JPYT01 128431 26592 35554 15/09/2014 08/10/2014 Scaffold NCBI SAMN02947321 Rhinopithecus bieti 61621 PRJNA339282 339282 GCA_001698545.1 MCGX01 105032 31734 49595 03/08/2016 03/08/2016 Scaffold NCBI SAMN02786331 Sinocyclocheilus grahami 75366 PRJNA316320 316320 GCA_001515645.1 LCYQ01 31277 54207 67410 16/12/2015 04/01/2016 Scaffold NCBI SAMN03320097 Pygocentrus nattereri 42514 PRJNA331139 331139 GCA_001682695.1 MAUM01 283518 28178 44364 08/07/2016 12/07/2016 Scaffold NCBI SAMN04522165 Chinchilla lanigera 34839 PRJNA68239 68239 GCA_000276665.1 AGCD01 2839 30308 45449 06/07/2012 06/11/2013 Scaffold Broad Institute SAMN00632093 Leptonychotes weddellii 9713 PRJNA232772 232772 GCA_000349705.1 APMU01 16711 25803 25718 28/03/2013 29/03/2013 Scaffold NCBI SAMN00672463 Lepisosteus oculatus 7918 PRJNA68247 68247 GCA_000242695.1 AHAT01 2106 21770 41647 16/12/2011 01/11/2013 Chromosome Broad Institute SAMN00706774 Pan paniscus 9597 PRJNA49285 49285 GCA_000258655.2 AJFE02 10984 29962 47451 30/03/2012 18/08/2015 Chromosome Max-Planck Institute for Evolutionary Anthropology SAMEA1029457 Notothenia coriiceps 8208 PRJNA66471 66471 GCA_000735185.1 AZAD01 38657 26863 32182 28/07/2014 22/10/2014 Scaffold Antarctic Fish Genome Project SAMN02206445 Pantholops hodgsonii 59538 PRJNA72465 72465 GCA_000400835.1 AGTT01 15059 31808 32279 21/05/2013 01/11/2013 Scaffold BGI SAMN00990743 Melopsittacus undulatus 13146 PRJNA197262 197262 GCA_000238935.1 AGAI01 25212 14536 17079 28/11/2011 11/08/2014 Scaffold NCBI SAMN02981360 Jaculus jaculus 51337 PRJNA72445 72445 GCA_000280705.1 AKZC01 10898 25275 25473 20/07/2012 01/11/2013 Scaffold Broad Institute SAMN00728442 Balaenoptera acutorostrata scammoni 310752 PRJNA72723 72723 GCA_000493695.1 ATDI01 10776 26861 34821 31/10/2013 09/01/2014 Scaffold Korea Ocean Research & Development Institute SAMN02192642 Cervus elaphus hippelaphus 46360 PRJNA324173 324173 GCA_002197005.1 MKHE01 11479 22846 19243 16/06/2017 19/06/2017 Chromosome National Agricultural Research and Innovation Centre SAMN05196248 Ailurus fulgens styani 424585 PRJNA298932 298932 GCA_002007465.1 LNAC01 11589 - - 28/02/2017 28/02/2017 Scaffold Institute of Zoology, Chinese Academy of Sciences SAMN04169031 Panthera tigris altaica 74533 PRJNA236771 236771 GCA_000464555.1 ATCQ01 1479 25041 29473 05/09/2013 27/09/2013 Scaffold NCBI SAMN02086964 Microtus ochrogaster 79684 PRJNA72443 72443 GCA_000317375.1 AHZW01 6450 24260 30752 03/12/2012 01/11/2013 Chromosome Broad Institute SAMN00727831 Condylura cristata 143302 PRJNA72447 72447 GCA_000260355.1 AJFV01 2040 20019 29166 20/04/2012 01/11/2013 Scaffold Broad Institute SAMN00727830 Apteryx australis mantelli 202946 PRJEB6383 287231 GCA_001039765.1 - 24720 18494 22793 - - Scaffold MPI-EVA SAMEA2560515 Rhinolophus ferrumequinum 59479 PRJNA209409 209409 GCA_000465495.1 AWHA01 160500 - - 05/09/2013 15/09/2013 Scaffold School of Biological & Chemical Sciences, Queen Mary University of London SAMN02213056 Serinus canaria 9135 PRJEB1766 233592 GCA_000534875.1 CAVT01 304400 17797 29964 06/01/2014 30/01/2015 Scaffold MPI MOLGEN SAMEA3138919 Peromyscus maniculatus bairdii 230844 PRJNA53563 53563 GCA_000500345.1 AYHN01 30921 28479 45588 26/11/2013 03/12/2013 Scaffold Baylor College of Medicine SAMN00848614 Sebastes rubrivinctus 72099 PRJNA62009 62009 GCA_000475215.1 AUPQ01 68206 - - 18/10/2013 11/08/2014 Scaffold University of Southern California SAMN02981552 Eptesicus fuscus 29078 PRJNA232522 232522 GCA_000308155.1 ALEH01 6789 22627 24147 30/07/2012 01/11/2013 Scaffold NCBI SAMN00767986 Cynoglossus semilaevis 244447 PRJNA251742 251742 GCA_000523025.1 AGRG01 31181 24279 36992 24/01/2014 28/01/2014 Chromosome NCBI SAMN02595200 Orycteropus afer afer 1230840 PRJNA74587 74587 GCA_000298275.1 ALYB01 22509 22908 25544 17/09/2012 01/11/2013 Scaffold Broad Institute SAMN00744890 Chrysochloris asiatica 185453 PRJNA74591 74591 GCA_000296735.1 AMDV01 20500 32357 25227 10/09/2012 01/11/2013 Scaffold Broad Institute SAMN00744889 Elephantulus edwardii 28737 PRJNA74589 74589 GCA_000299155.1 AMGZ01 8768 34709 25209 20/09/2012 01/11/2013 Scaffold Broad Institute SAMN00749966 Octodon degus 10160 PRJNA74595 74595 GCA_000260255.1 AJSA01 7135 34039 27336 19/04/2012 01/11/2013 Scaffold Broad Institute SAMN00769067 Camelus ferus 419612 PRJNA76177 76177 GCA_000311805.2 AGVR01 13334 24722 31796 08/11/2012 06/11/2013 Scaffold The Bactrian Camels Genome Sequencing and Analysis Consortium SAMN01910617 Boleophthalmus pectinirostris 150288 PRJNA384419 384419 GCA_000788275.1 JACK01 16620 22665 25161 25/11/2014 03/12/2014 Scaffold NCBI SAMN03201692 Mesocricetus auratus 10036 PRJNA77669 77669 GCA_000349665.1 APMT01 21484 27367 36852 28/03/2013 29/03/2013 Scaffold Broad Institute SAMN00769068 Pteropus alecto 9402 PRJNA232518 232518 GCA_000325575.1 ALWS01 65598 22140 33106 17/12/2012 06/11/2013 Scaffold NCBI SAMN01103203 Seriola dumerili 41447 PRJDB5856 397287 GCA_002260705.1 BDQW01 34656 24086 32734 04/08/2017 04/08/2017 Scaffold Genomic breeding group, Research Center for Aquatic Breeding, National Research Institute of aquaculture, FRA SAMD00083043 Nannospalax galili 1026970 PRJNA254049 254049 GCA_000622305.1 AXCS01 154976 27848 38552 04/04/2014 05/06/2014 Scaffold NCBI SAMN02299330 Anoplopoma fimbria 229290 PRJNA202249 202249 GCA_000499045.1 AWGY01 208506 - - 25/11/2013 25/11/2013 Contig University of Victoria SAMN02144194 Mus spretus 10096 PRJNA310854 310854 GCA_001624865.1 LVXV01 5404 - - 15/04/2016 25/04/2016 Chromosome Wellcome Trust Sanger Institute SAMN04489830 Myodes glareolus 447135 PRJNA290429 290429 GCA_001305785.1 LIPI01 367242 - - 02/10/2015 08/07/2016 Scaffold University of Liverpool SAMN03863713 Tupaia chinensis 246437 PRJNA169406 169406 GCA_000334495.1 ALAR01 50750 35882 36148 28/01/2013 13/03/2014 Scaffold BGI SAMN01084043 Poecilia formosa 48698 PRJNA237006 237006 GCA_000485575.1 AYCK01 3985 31585 49495 25/10/2013 11/08/2014 Scaffold NCBI SAMN02981564 Astyanax mexicanus 7994 PRJNA237016 237016 GCA_000372685.2 APWO02 2415 30815 42649 23/04/2013 25/09/2017 Chromosome NCBI SAMN02981523 Stegastes partitus 144197 PRJNA251741 251741 GCA_000690725.1 JMKM01 5818 24580 31597 12/05/2014 13/05/2014 Scaffold NCBI SAMN02743342 Cyprinodon variegatus 28743 PRJNA308224 308224 GCA_000732505.1 JPKM01 9259 24878 36524 17/07/2014 22/07/2014 Scaffold NCBI SAMN02736898 Oncorhynchus kisutch 8019 PRJNA378663 378663 GCA_002021735.1 MPKV01 22813 44786 57592 06/03/2017 06/03/2017 Chromosome NCBI SAMN05991263 Chlorocebus sabaeus 60711 PRJNA215854 215854 GCA_000409795.2 AQIB01 2022 35027 61803 17/05/2013 25/03/2014 Chromosome NCBI SAMN01760484 Austrofundulus limnaeus 52670 PRJNA294420 294420 GCA_001266775.1 LDAR01 29785 26706 35329 28/07/2015 31/07/2015 Scaffold NCBI SAMN03490872 Delphinapterus leucas 9749 PRJNA407951 407951 GCA_002288925.2 NQVZ01 6972 25391 49714 11/09/2017 15/09/2017 Scaffold NCBI SAMN06216270 Phodopus sungorus 10044 PRJNA318271 318271 GCA_001707965.1 MCBN01 1462128 - - 18/08/2016 18/08/2016 Contig University of Chicago SAMN05191964 Macaca nemestrina 9545 PRJNA279145 279145 GCA_000956065.1 JZLF01 9733 37066 62876 16/03/2015 19/03/2015 Scaffold NCBI SAMN03121842 Geospiza fortis 48883 PRJNA217051 217051 GCA_000277835.1 AKZB01 27239 14568 16724 11/07/2012 17/11/2016 Scaffold NCBI SAMN00839579 Cercocebus atys 9531 PRJNA279144 279144 GCA_000955945.1 JZLG01 11433 30650 65920 16/03/2015 19/03/2015 Scaffold NCBI SAMN03379531 Chelonia mydas 8469 PRJNA234097 234097 GCA_000344595.1 AJIM01 140023 19323 20261 01/03/2013 11/08/2014 Scaffold NCBI SAMN02981410 Thunnus orientalis 8238 PRJDA68701 68701 GCA_000418415.1 BADN01 133062 - - 27/06/2013 15/10/2015 Contig National Research Institute of Fisheries Science SAMD00036584 Scartelaos histophorus 166764 PRJNA232437 232437 GCA_000787155.1 JACN01 156044 - - 25/11/2014 03/12/2014 Scaffold BGI-shenzhen SAMN03201693 Odobenus rosmarus divergens 9708 PRJNA167474 167474 GCA_000321225.1 ANOP01 3893 25186 31370 17/12/2012 20/04/2015 Scaffold Marine mammals SAMN01180787 Orcinus orca 9733 PRJNA167475 167475 GCA_000331955.2 ANOL02 1668 22496 27870 17/12/2012 20/04/2015 Scaffold Marine mammals SAMN01180276 Numida meleagris 8996 PRJNA352321 352321 GCA_002078875.2 MTSP01 2739 21748 43240 04/04/2017 04/04/2017 Chromosome INRA SAMN05969731 Falco cherrug 345164 PRJNA217049 217049 GCA_000337975.1 AKMU01 5863 15380 21235 05/02/2013 11/08/2014 Scaffold NCBI SAMN02981426 Vipera berus berus 31156 PRJNA170536 170536 GCA_000800605.1 JTGP01 28883 - - 09/12/2014 10/12/2014 Scaffold BCM-HGSC SAMN02780930 Phylloscopus trochilus acredula 209779 PRJNA319295 319295 GCA_002305835.1 LXGM01 5995 - - 08/06/2016 08/06/2016 Scaffold Lund University SAMN04881205 Sebastes nigrocinctus 72089 PRJNA171384 171384 GCA_000475235.2 AUPR02 15872 - - 18/10/2013 21/12/2016 Scaffold USC SAMN02981553 Pelodiscus sinensis 13735 PRJNA221645 221645 GCA_000230535.1 AGCU01 19904 21622 32888 24/07/2012 11/08/2014 Scaffold NCBI SAMN02981371 Acinonyx jubatus 32536 PRJNA305718 305718 GCA_001443585.1 LLWD01 14383 25029 27284 13/11/2015 16/12/2015 Scaffold NCBI SAMN04127588 Myotis davidii 225400 PRJNA232515 232515 GCA_000327345.1 ALWT01 101769 26055 33106 17/12/2012 06/11/2013 Scaffold NCBI SAMN01103204 Poecilia mexicana 48701 PRJNA305619 305619 GCA_001443325.1 LMXC01 18105 30746 47406 12/11/2015 13/11/2015 Scaffold NCBI SAMN02048972 Labrus bergylta 56723 PRJEB13687 320367 GCA_900080235.1 FKLU01 13466 28378 35873 03/05/2016 03/05/2016 Scaffold National Institute of nutrition and seafood research SAMEA3939555 Lipotes vexillifer 118797 PRJNA174066 174066 GCA_000442215.1 AUPI01 30713 25232 26901 24/07/2013 06/08/2014 Scaffold BGI SAMN02953859 Hipposideros armiger 186990 PRJNA357596 357596 GCA_001890085.1 JXIK01 7571 25449 45831 06/12/2016 06/12/2016 Scaffold NCBI SAMN03177460 Pseudopodoces humilis 181119 PRJNA217046 217046 GCA_000331425.1 ANZD01 5406 16561 27572 09/01/2013 11/08/2014 Scaffold NCBI SAMN02981490 Amazona vittata 241585 PRJNA171587 171587 GCA_000332375.1 AOCU01 182974 - - 18/01/2013 11/08/2014 Scaffold Puerto Rican Parrot Genome Project SAMN02981494 Leuciscus waleckii 155063 PRJEB12292 320706 GCA_900092035.1 FLSR01 4888 - - 27/06/2016 27/06/2016 Scaffold CHINESE ACADEMY OF FISHERY SCIENCE SAMEA3723233 Apalone spinifera 55534 PRJNA177958 177958 GCA_000385615.1 APJP01 286620 - - 26/04/2013 26/08/2014 Scaffold WUGSC SAMN03004388 Xiphophorus hellerii 8084 PRJNA290782 290782 GCA_001443345.1 LNCB01 25 - - 13/11/2015 13/11/2015 Scaffold McDonnell Genome Institute - Washington University School of Medicine SAMN03968850 Clupea harengus 7950 PRJNA286317 286317 GCA_000966335.1 JZKK01 6915 25434 28335 30/03/2015 30/03/2015 Scaffold NCBI SAMN03154066 Crotalus horridus 35024 PRJNA181087 181087 GCA_001625485.1 LVCR01 186068 - - 21/04/2016 21/04/2016 Scaffold Timber Rattlesnake Genome SAMN01815951 Thamnophis sirtalis 35019 PRJNA294278 294278 GCA_001077635.2 LFLD01 7930 20101 25180 26/06/2015 30/06/2015 Scaffold NCBI SAMN03759628 Hippocampus comes 109280 PRJNA359802 359802 GCA_001891065.1 LVHJ01 37377 25471 41965 08/12/2016 08/12/2016 Scaffold NCBI SAMN04531611 Fukomys damarensis 885580 PRJNA268209 268209 GCA_000743615.1 AYUG01 74730 29892 43907 22/08/2014 04/09/2014 Scaffold NCBI SAMN02339281 Xiphophorus couchianus 32473 PRJNA290781 290781 GCA_001444195.1 LNCC01 25 - - 13/11/2015 17/11/2015 Scaffold McDonnell Genome Institute - Washington University School of Medicine SAMN03922721 Lethenteron camtschaticum 980415 PRJNA237018 237018 GCA_000466285.1 APJL01 86125 - - 10/09/2013 11/08/2014 Scaffold NCBI SAMN02981514 Ursus maritimus 29073 PRJNA254163 254163 GCA_000687225.1 AVOR01 23819 26982 28887 08/05/2014 09/05/2014 Scaffold NCBI SAMN02729226 Grus japonensis 30415 PRJDB4708 327648 GCA_002002985.1 BDFG01 357545 - - 01/07/2016 01/07/2016 Scaffold Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies SAMD00050840 Balearica regulorum gibbericeps 100784 PRJNA264996 264996 GCA_000709895.1 JJRR01 53491 15122 16163 02/06/2014 17/11/2016 Scaffold NCBI SAMN02318095 Capreolus capreolus 9858 PRJEB4372 213099 GCA_000751575.1 CCMK01 3088511 - - 05/09/2014 05/09/2014 Scaffold UNIMELB SAMEA2531521 Poecilia latipinna 48699 PRJNA305623 305623 GCA_001443285.1 LMXD01 17988 30571 47072 12/11/2015 13/11/2015 Scaffold NCBI SAMN02048973 Pygoscelis adeliae 9238 PRJNA261076 261076 GCA_000699105.1 JMFP01 19265 14407 16927 07/05/2014 17/11/2016 Scaffold NCBI SAMN02596601 Protobothrops mucrosquamatus 103944 PRJDB4386 304719 GCA_001527695.3 BCNE02 52280 21073 22660 14/01/2016 29/07/2016 Scaffold Okinawa Institute of Science and Technology SAMD00043515 Myotis brandtii 109478 PRJNA218631 218631 GCA_000412655.1 ANKR01 169750 28478 40808 19/06/2013 09/02/2015 Scaffold NCBI SAMN01801565 Alligator sinensis 38654 PRJNA221633 221633 GCA_000455745.1 AVPB01 9317 22098 28309 27/08/2013 11/08/2014 Scaffold NCBI SAMN02981559 Rana catesbeiana 8400 PRJNA285814 285814 GCA_002284835.1 LIAG01 2082530 - - 18/01/2017 01/09/2017 Contig BC Cancer Agency SAMN03760860 Phascolarctos cinereus 38626 PRJNA384067 384067 GCA_002099425.1 MSTS01 1907 31659 46908 18/04/2017 18/04/2017 Contig NCBI SAMN06198159 Pampus argenteus 206143 PRJNA240272 240272 GCA_000697985.1 JHEK01 298139 - - 03/06/2014 03/06/2016 Scaffold Kuwait Institute for Scientific Research (KISR) SAMN02699082 Meriones unguiculatus 10047 PRJNA391923 391923 GCA_002204375.1 NHTI01 68793 25856 38763 21/06/2017 21/06/2017 Scaffold NCBI SAMN06897401 Monopterus albus 43700 PRJNA380265 380265 GCA_001952655.1 AONE01 20622 23830 40334 13/01/2017 17/01/2017 Scaffold NCBI SAMN06219872 Anguilla rostrata 7938 PRJNA285069 285069 GCA_001606085.1 LTYT01 79209 - - 01/04/2016 04/04/2016 Scaffold Universite Laval SAMN03737505 Propithecus coquereli 379532 PRJNA281642 281642 GCA_000956105.1 JZKE01 22539 22836 28194 17/03/2015 23/03/2015 Scaffold NCBI SAMN03121823 Eidolon helvum 77214 PRJNA209406 209406 GCA_000465285.1 AWHC01 133538 - - 05/09/2013 13/09/2013 Scaffold School of Biological & Chemical Sciences, Queen Mary University of London SAMN02212690 Megaderma lyra 9413 PRJNA209407 209407 GCA_000465345.1 AWHB01 192872 - - 05/09/2013 14/09/2013 Scaffold School of Biological & Chemical Sciences, Queen Mary University of London SAMN02212695 Rhincodon typus 259920 PRJNA378405 378405 GCA_001642345.2 LVEK02 57334 24529 27896 11/05/2016 03/03/2017 Scaffold NCBI SAMN04562461 Maccullochella peelii 135761 PRJNA290988 290988 GCA_002120245.1 LKNJ01 18198 - - 09/05/2017 09/05/2017 Scaffold Monash University Malaysia SAMN03938494 Trichechus manatus latirostris 127582 PRJNA68243 68243 GCA_000243295.1 AHIN01 6323 22652 26315 20/01/2012 20/04/2015 Scaffold Broad Institute SAMN00632092 Ceratotherium simum simum 73337 PRJNA74583 74583 GCA_000283155.1 AKZM01 3087 25570 33629 30/07/2012 01/11/2013 Scaffold Broad Institute SAMN00778988 Anser cygnoides domesticus 381198 PRJNA290577 290577 GCA_000971095.1 AOGC01 7593 20800 31811 08/04/2015 07/05/2015 Scaffold NCBI SAMN01830643 Egretta garzetta 188379 PRJNA253831 253831 GCA_000687185.1 JJRC01 11791 14431 15934 29/04/2014 17/11/2016 Scaffold NCBI SAMN02596466 Equus przewalskii 9798 PRJNA253941 253941 GCA_000696695.1 ATBW01 53097 26953 38416 30/05/2014 05/06/2014 Scaffold NCBI SAMN02808398 Tyto alba 56313 PRJNA263629 263629 GCA_000687205.1 JJRD01 62122 13995 14896 30/04/2014 17/11/2016 Scaffold NCBI SAMN02339894 Phaethon lepturus 97097 PRJNA265998 265998 GCA_000687285.1 JJRF01 66785 15174 16216 30/04/2014 17/11/2016 Scaffold NCBI SAMN02339888 Cavia aperea 37548 PRJNA212237 212237 GCA_000688575.1 AVPZ01 3131 - - 21/01/2014 23/01/2014 Scaffold Leibniz Institute for Zoo and Wildlife research SAMN02252454 Pelecanus crispus 36300 PRJNA253833 253833 GCA_000687375.1 JJRG01 63982 15382 16298 01/05/2014 17/11/2016 Scaffold NCBI SAMN02339887 Cariama cristata 54380 PRJNA263623 263623 GCA_000690535.1 JJRQ01 53474 15124 16125 05/05/2014 17/11/2016 Scaffold NCBI SAMN02318733 Colius striatus 57412 PRJNA265879 265879 GCA_000690715.1 JJRP01 70188 15009 15797 05/05/2014 17/11/2016 Scaffold NCBI SAMN02324230 Eurypyga helias 54383 PRJNA265393 265393 GCA_000690775.1 JJRO01 62699 14812 15656 05/05/2014 17/11/2016 Scaffold NCBI SAMN02324546 Fulmarus glacialis 30455 PRJNA261828 261828 GCA_000690835.1 JJRN01 57389 15228 16240 03/05/2014 17/11/2016 Scaffold NCBI SAMN02324803 Haliaeetus albicilla 8969 PRJNA263514 263514 GCA_000691405.1 JJRL01 50905 15162 19224 02/05/2014 17/11/2016 Scaffold NCBI SAMN02333670 Merops nubicus 57421 PRJNA253837 253837 GCA_000691845.1 JJRJ01 53499 14658 15431 01/05/2014 17/11/2016 Scaffold NCBI SAMN02338310 Opisthocomus hoazin 30419 PRJNA263612 263612 GCA_000692075.1 JMFL01 10256 13615 14878 13/05/2014 17/11/2016 Scaffold NCBI SAMN02302474 Leptosomus discolor 188344 PRJNA263616 263616 GCA_000691785.1 JJRK01 57160 15300 16371 02/05/2014 17/11/2016 Scaffold NCBI SAMN02333687 Acanthisitta chloris 57068 PRJNA253841 253841 GCA_000695815.1 JJRS01 53875 15175 16077 06/05/2014 17/11/2016 Scaffold NCBI SAMN02318032 Mesitornis unicolor 54374 PRJNA265381 265381 GCA_000695765.1 JJRI01 67520 15719 16646 01/05/2014 17/11/2016 Scaffold NCBI SAMN02339298 Corvus brachyrhynchos 85066 PRJNA253849 253849 GCA_000691975.1 JMFN01 10547 19146 29421 13/05/2014 17/11/2016 Scaffold NCBI SAMN02297499 Picoides pubescens 118200 PRJNA263502 263502 GCA_000699005.1 JJRU01 31254 14443 15826 06/05/2014 17/11/2016 Scaffold NCBI SAMN02314405 Pterocles gutturalis 240206 PRJNA265368 265368 GCA_000699245.1 JMFR01 58607 14969 15872 07/05/2014 17/11/2016 Scaffold NCBI SAMN02339892 Antrostomus carolinensis 279965 PRJNA265383 265383 GCA_000700745.1 JMFU01 70122 15541 16463 08/05/2014 17/11/2016 Scaffold NCBI SAMN02318612 Aptenodytes forsteri 9233 PRJNA261081 261081 GCA_000699145.1 JMFQ01 10672 15366 19104 07/05/2014 17/11/2016 Scaffold NCBI SAMN02596600 Charadrius vociferus 50402 PRJNA263452 263452 GCA_000708025.2 JMFX02 15167 14731 16428 09/05/2014 17/11/2016 Scaffold NCBI SAMN02296710 Apaloderma vittatum 57397 PRJNA263608 263608 GCA_000703405.1 JMFV01 54728 14490 15288 08/05/2014 17/11/2016 Scaffold NCBI SAMN02318033 Cuculus canorus 55661 PRJNA263299 263299 GCA_000709325.1 JNOX01 14930 15045 16796 12/06/2014 17/11/2016 Scaffold NCBI SAMN02298149 Phalacrocorax carbo 9209 PRJNA261839 261839 GCA_000708925.1 JMFI01 64312 14501 15339 12/05/2014 17/11/2016 Scaffold NCBI SAMN02339889 Tauraco erythrolophus 121530 PRJNA265115 265115 GCA_000709365.1 JNOY01 59587 15059 16054 12/06/2014 17/11/2016 Scaffold NCBI SAMN02339893 Tinamus guttatus 94827 PRJNA265201 265201 GCA_000705375.2 JMFW02 82514 16739 17873 08/05/2014 17/11/2016 Scaffold NCBI SAMN02316659 Buceros rhinoceros silvestris 175836 PRJNA266010 266010 GCA_000710305.1 JMFK01 62257 14483 15510 02/06/2014 17/11/2016 Scaffold NCBI SAMN02318191 Haliaeetus leucocephalus 52644 PRJNA269279 269279 GCA_000737465.1 JPRR01 1023 15817 25265 04/08/2014 04/08/2014 Scaffold NCBI SAMN02664716 Nestor notabilis 176057 PRJNA264990 264990 GCA_000696875.1 JJRH01 42180 14860 15873 01/05/2014 17/11/2016 Scaffold NCBI SAMN02339299 Chaetura pelagica 8897 PRJNA264987 264987 GCA_000747805.1 AVOS01 19072 14343 15942 04/09/2014 17/11/2016 Scaffold NCBI SAMN03018471 Mus caroli 10089 PRJEB14895 360714 GCA_900094665.2 FMAL02 3163 28755 37588 10/01/2017 26/04/2017 Chromosome EBI SAMEA3367631 Chlamydotis macqueenii 187382 PRJNA266006 266006 GCA_000695195.1 JMFJ01 59693 14765 15683 12/05/2014 17/11/2016 Scaffold NCBI SAMN02324157 Cyprinodon nevadensis pectoralis 69242 PRJNA254053 254053 GCA_000776015.1 JSUU01 96516 - - 13/11/2014 13/11/2014 Scaffold University of Colorado, Boulder SAMN03072616 Periophthalmus magnuspinnatus 409849 PRJNA232435 232435 GCA_000787105.1 JACL01 26060 - - 25/11/2014 03/12/2014 Scaffold BGI-shenzhen SAMN03201694 Periophthalmodon schlosseri 1365757 PRJNA232436 232436 GCA_000787095.1 JACM01 46662 - - 25/11/2014 03/12/2014 Scaffold BGI-Shenzhen SAMN03201695 Pseudopleuronectes yokohamae 245875 PRJDB3259 268070 GCA_000787555.1 BBOV01 525502 - - 21/11/2014 25/08/2015 Contig Tohoku university SAMD00021058 Nanorana parkeri 125878 PRJNA344660 344660 GCA_000935625.1 JYOU01 25188 21171 24758 02/03/2015 02/03/2015 Scaffold NCBI SAMN02720813 Marmota marmota marmota 9994 PRJEB8272 274843 GCA_001458135.1 CZRN01 14543 27711 31750 06/11/2015 06/11/2015 Scaffold MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH SAMEA3214822 Mandrillus leucophaeus 9568 PRJNA279492 279492 GCA_000951045.1 JYKQ01 12821 27823 38336 11/03/2015 12/03/2015 Scaffold NCBI SAMN03121813 Colobus angolensis palliatus 336983 PRJNA279495 279495 GCA_000951035.1 JYKR01 13124 27816 38656 11/03/2015 12/03/2015 Scaffold NCBI SAMN03121814 Manis javanica 9974 PRJNA335369 335369 GCA_001685135.1 JSZB01 80670 25268 41843 14/07/2016 14/07/2016 Scaffold NCBI SAMN02935387 Sinocyclocheilus anshuiensis 1608454 PRJNA316320 316320 GCA_001515605.1 LAVE01 85682 50985 68474 14/12/2015 04/01/2016 Scaffold NCBI SAMN03320099 Sinocyclocheilus rhinocerous 307959 PRJNA316320 316320 GCA_001515625.1 LAVF01 164173 52111 68562 14/12/2015 04/01/2016 Scaffold NCBI SAMN03320098 Spermophilus dauricus 99837 PRJNA215874 215874 GCA_002406435.1 AXRT01 360804 - - 28/09/2017 03/10/2017 Scaffold BGI-shenzhen SAMN07711139 Sebastes minor 214483 PRJNA236304 236304 GCA_001910765.1 LHCJ01 166448 - - 20/12/2016 21/12/2016 Scaffold USC SAMN03354192 Sebastes steindachneri 201708 PRJNA236323 236323 GCA_001910785.1 LCWK01 279232 - - 20/12/2016 21/12/2016 Scaffold USC SAMN03579458 Eulemur macaco 30602 PRJNA284191 284191 GCA_001262655.1 LGHX01 26772 - - 06/08/2015 02/09/2015 Scaffold University of Chicago SAMN03699689 Eulemur flavifrons 87288 PRJNA284191 284191 GCA_001262665.1 LGHW01 38367 - - 06/08/2015 02/09/2015 Scaffold University of Chicago SAMN03699688 Zosterops lateralis melanops 1220523 PRJNA277310 277310 GCA_001281735.1 LAII01 2933 - - 14/09/2015 14/09/2015 Scaffold Imperial College London SAMN03389315 Pantherophis guttatus 94885 PRJNA268069 268069 GCA_001185365.1 JTLQ01 883920 - - 21/07/2015 21/07/2015 Scaffold University of Geneva SAMN03202658 Apodemus sylvaticus 10129 PRJNA290427 290427 GCA_001305905.1 LIPJ01 559629 - - 02/10/2015 02/10/2015 Scaffold University of Liverpool SAMN03863808 Microtus agrestis 29092 PRJNA290426 290426 GCA_001305995.1 LIQJ01 230202 - - 02/10/2015 02/10/2015 Scaffold University of Liverpool SAMN03863806 Gekko japonicus 146911 PRJNA308133 308133 GCA_001447785.1 LNDG01 191500 21426 24464 24/11/2015 25/11/2015 Scaffold NCBI SAMN04157958 Amazona aestiva 12930 PRJNA294082 294082 GCA_001420675.1 LMAW01 3232 16307 16144 30/10/2015 30/10/2015 Scaffold LNCC SAMN04014659 Sturnus vulgaris 9172 PRJNA304638 304638 GCA_001447265.1 LNCF01 2361 16813 26611 20/11/2015 20/11/2015 Scaffold NCBI SAMN04029017 Cottus rhenanus 446433 PRJNA297779 297779 GCA_001455555.1 LKTN01 164693 - - 02/12/2015 02/12/2015 Scaffold Cold Spring Harbor Laboratory SAMN04145896 Lonchura striata domestica 299123 PRJNA391487 391487 GCA_002197715.1 MUZQ01 3014 17483 31410 19/06/2017 19/06/2017 Scaffold NCBI SAMN06283872 Callipepla squamata 9009 PRJNA301734 301734 GCA_002218305.1 MCFN01 34302 17131 17131 13/07/2017 20/07/2017 Scaffold Texas A&M University SAMN04255336 Miniopterus natalensis 291302 PRJNA317472 317472 GCA_001595765.1 LDJU01 1269 22891 29787 22/03/2016 22/03/2016 Scaffold NCBI SAMN03652541 Nannopterum brasilianus 37046 PRJNA327123 327123 GCA_002174335.1 NFME01 266364 - - 06/06/2017 06/06/2017 Scaffold UCLA SAMN06832916 Lepidothrix coronata 321398 PRJNA338288 338288 GCA_001604755.1 LVWP01 4612 18695 36671 31/03/2016 31/03/2016 Scaffold NCBI SAMN04274560 Cebus capucinus imitator 1737458 PRJNA328123 328123 GCA_001604975.1 LVWQ01 7156 36983 53175 31/03/2016 04/04/2016 Scaffold NCBI SAMN04522148 Phylloscopus plumbeitarsus 56441 PRJNA314915 314915 GCA_001655115.1 LXOY01 308480 - - 02/06/2016 02/06/2016 Scaffold University of British Columbia SAMN04545452 Carlito syrichta 1868482 PRJNA20339 20339 GCA_000164805.2 ABRT02 337189 25660 33081 10/09/2013 04/08/2014 Scaffold Washington University (WashU) SAMN02445010 Ellobius talpinus 329620 PRJNA305123 305123 GCA_001685095.1 LOJH01 350460 - - 14/07/2016 14/07/2016 Scaffold Erasmus medical center (ErasmusMC) SAMN04317029 Malaclemys terrapin terrapin 391341 PRJNA339452 339452 GCA_001728815.2 MDXI01 21684 13 13 15/09/2016 15/09/2016 Contig University of Maryland SAMN05591378 Setophaga coronata coronata 1037456 PRJNA325157 325157 GCA_001746935.1 MDLI01 154686 - - 27/09/2016 27/09/2016 Scaffold Cornell University SAMN05224218 Tympanuchus cupido pinnatus 211916 PRJNA330991 330991 GCA_001870855.1 MOXI01 12186 - - 07/11/2016 07/11/2016 Scaffold Revive & Restore Heath Hen De-extinction Team SAMN05433571 Rhinolophus sinicus 89399 PRJNA358073 358073 GCA_001888835.1 LVEH01 63439 27500 47594 04/12/2016 04/12/2016 Scaffold NCBI SAMN04038064 Patagioenas fasciata monilis 372326 PRJNA308039 308039 GCA_002029285.1 LSYS01 9784 19528 24805 15/03/2017 15/03/2017 Scaffold University of California, Santa Cruz SAMN04386172 Mus pahari 10093 PRJEB14896 360715 GCA_900095145.2 FMBV02 2581 26179 36170 10/01/2017 26/04/2017 Chromosome EBI SAMEA3367645 Sporophila hypoxantha 256693 PRJNA382416 382416 GCA_002167245.1 NDFG01 5095 - - 05/06/2017 05/06/2017 Scaffold Cornell University SAMN06754710 Nannopterum harrisi 473964 PRJNA327123 327123 GCA_002173475.1 NEVG01 2651 - - 06/06/2017 06/06/2017 Scaffold UCLA SAMN05301669 Nannopterum auritus 56069 PRJNA327123 327123 GCA_002173455.1 NFMC01 27523 - - 06/06/2017 06/06/2017 Scaffold UCLA SAMN06226698 Psammomys obesus 48139 PRJNA355058 355058 GCA_002215935.1 NESX01 96427 - - 07/07/2017 07/07/2017 Contig Department of Zoology, University of Oxford, UK SAMN06061930 Anas zonorhyncha 75864 PRJNA392350 392350 GCA_002224875.1 NOIK01 20089 - - 25/07/2017 25/07/2017 Scaffold BGI SAMN07337763 Crotalus pyrrhus 384069 PRJNA255393 255393 GCA_000737285.1 JPMF01 473380 - - 01/08/2014 12/11/2014 Scaffold Reed College SAMN02918464 Uria lomvia 28711 PRJNA395774 395774 GCA_002289315.1 NOXD01 9327 - - 11/09/2017 12/09/2017 Scaffold Queen's University SAMN07414775 Apodemus speciosus 105296 PRJDB5914 396846 GCA_002335545.1 BDUI01 336124 - - 01/08/2017 01/08/2017 Scaffold University of the Ryukyus SAMD00084465 Strix occidentalis caurina 311401 PRJNA338167 338167 GCA_002372975.1 NIFN01 8108 - - 26/09/2017 26/09/2017 Scaffold California Academy of Sciences SAMN05525316 Anser cygnoides 8845 PRJNA253976 253976 GCA_002166845.1 LABU01 1801 - - 02/06/2017 05/06/2017 Scaffold Poultry Science Institute SAMN02898389 Vicugna pacos huacaya 273913 PRJNA233565 233565 GCA_000767525.1 JEMW01 52275 - - 20/10/2014 11/02/2015 Scaffold BGI-Shenzhen SAMN02996813 Ovis aries musimon 9938 PRJNA276576 276576 GCA_000765115.1 CBYI01 6173 28073 53571 11/07/2014 30/01/2015 Scaffold NCBI SAMEA3146279 Mus musculus musculus 39442 PRJNA310854 310854 GCA_001624775.1 LVXU01 3140 - - 15/04/2016 25/04/2016 Chromosome Wellcome Trust Sanger Institute SAMN04489829 Mus musculus domesticus 10092 PRJNA310854 310854 GCA_001624835.1 LVXW01 2239 - - 15/04/2016 25/04/2016 Chromosome Wellcome Trust Sanger Institute SAMN04489831 Giraffa camelopardalis tippelskirchi 439328 PRJNA313910 313910 GCA_001651235.1 LVKQ01 513177 - - 20/05/2016 07/06/2016 Scaffold Pennsylvania State University SAMN04526126 Ailuropoda melanoleuca 9646 PRJNA299083 299083 GCA_002007445.1 LNAT01 57414 - - 28/02/2017 28/02/2017 Scaffold Institute of Zoology, Chinese Academy of Sciences SAMN04193337 Alligator mississippiensis 8496 PRJNA305630 305630 GCA_001541155.1 LPUV01 7091 - - 26/01/2016 26/01/2016 Scaffold Dovetail Genomics SAMN02981418 Ambystoma mexicanum 8296 PRJNA378970 378970 GCA_002915635.1 PGSH01 125724 - - 05/02/2018 05/02/2018 Scaffold Max Planck Society SAMN06554622 Anas platyrhynchos 8839 PRJNA46621 46621 GCA_000355885.1 ADON01 78488 21727 30493 02/04/2013 17/06/2013 Scaffold State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing SAMN00011637 Anguilla japonica 7937 PRJNA158309 158309 GCA_000470695.1 AVPY01 323740 - - 12/09/2013 26/08/2014 Scaffold ZF-screens B.V. SAMN03004389 Aquila chrysaetos canadensis 216574 PRJNA277694 277694 GCA_000766835.1 JRUM01 1142 17520 31284 12/10/2014 14/10/2014 Scaffold NCBI SAMN03079786 Ara macao 176014 PRJNA189648 189648 GCA_000400695.1 AOUJ01 192790 - - 20/05/2013 21/08/2014 Scaffold Texas A&M University SAMN03000706 Bos indicus 9915 PRJNA360096 360096 GCA_000247795.2 AGFL01 32 26205 35992 16/02/2012 25/11/2014 Chromosome NCBI SAMN02953802 Bos mutus 72004 PRJNA74739 74739 GCA_000298355.1 AGSK01 41192 25577 28881 21/05/2012 01/11/2013 Scaffold BGI-shenzhen SAMN00744358 Bubalus bubalis 89462 PRJNA223666 223666 GCA_000471725.1 AWWX01 366983 28453 41499 27/09/2013 30/09/2013 Scaffold NCBI SAMN02191888 Calidris pugnax 198806 PRJNA305421 305421 GCA_001431845.1 LDEH01 3753 18583 30889 04/11/2015 04/11/2015 Scaffold NCBI SAMN03491621 Callithrix jacchus 9483 PRJNA20401 20401 GCA_000004665.1 ACFV01 16399 35188 45251 21/01/2010 11/08/2014 Chromosome Washington University (WashU) SAMN02981242 Calypte anna 9244 PRJNA253828 253828 GCA_000699085.1 JJRV01 54736 14812 16329 06/05/2014 17/11/2016 Scaffold NCBI SAMN02265252 Camelus bactrianus 9837 PRJNA269612 269612 GCA_000767855.1 JARL01 35455 24287 28601 16/10/2014 23/10/2014 Scaffold NCBI SAMN02953968 Camelus dromedarius 9838 PRJNA269274 269274 GCA_000803125.1 JWIN01 35752 - - 17/12/2014 17/12/2014 Scaffold Vetmeduni Vienna SAMN03252735 Canis lupus familiaris 9615 PRJNA13179 13179 GCA_000002285.2 AAEX03 3310 36809 58776 10/07/2004 06/08/2014 Chromosome Dog Genome Sequencing Consortium SAMN02953603 Capra aegagrus 9923 PRJNA261263 261263 GCA_000978405.1 JXYW01 89498 - - 21/04/2015 24/04/2015 Chromosome BGI SAMN03282421 Capra hircus 9925 PRJNA340281 340281 GCA_001704415.1 LWLT01 29907 28404 42687 12/08/2016 24/08/2016 Chromosome NCBI SAMN03863711 Castor canadensis 51338 PRJNA371604 371604 GCA_001984765.1 MTKA01 21157 27186 37422 04/02/2017 04/02/2017 Scaffold NCBI SAMN06187566 Colinus virginianus 9014 PRJNA188411 188411 GCA_000599485.1 AWGU01 374224 - - 20/03/2014 11/08/2014 Scaffold Texas A&M University SAMN02981558 Columba livia 8932 PRJNA217047 217047 GCA_000337935.1 AKCR01 14923 26430 32508 04/02/2013 13/12/2017 Scaffold NCBI SAMN02981415 Corvus cornix cornix 932674 PRJNA192205 192205 GCA_000738735.2 JPSR02 113 17215 29588 04/08/2014 08/03/2017 Scaffold Uppsala University SAMN02143031 Coturnix japonica 93934 PRJNA314147 314147 GCA_001577835.1 LSZS01 2531 20441 39088 24/02/2016 01/03/2016 Chromosome NCBI SAMN03989050 Cricetulus griseus 10029 PRJNA69991 69991 GCA_000223135.1 AFTD01 109152 27752 34935 03/08/2011 11/08/2014 Scaffold Beijing Genomics Institute SAMN02981352 Crocodylus porosus 8502 PRJNA357059 357059 GCA_001723895.1 MDVP01 70 19551 28676 13/09/2016 13/09/2016 Scaffold NCBI SAMN03102602 Cyprinus carpio 7962 PRJNA352247 352247 GCA_000951615.2 - 9378 66544 62491 11/09/2014 28/01/2016 Chromosome NCBI SAMEA2757102 Danio rerio 7955 PRJNA11776 11776 GCA_000002035.4 - 2848 46998 57100 05/07/2005 25/01/2018 Chromosome Genome Reference Consortium SAMN06930106 Dicentrarchus labrax 13489 PRJEB5099 243422 GCA_000689215.1 CBXY01 25 - - 07/04/2014 05/03/2015 Scaffold MPI-PZ SAMEA3271076 Ellobius lutescens 39086 PRJNA305123 305123 GCA_001685115.1 LOJG01 413500 - - 14/07/2016 14/07/2016 Scaffold Erasmus medical center (ErasmusMC) SAMN04317028 Equus caballus 9796 PRJNA18661 18661 GCA_000002305.1 AAWR02 9688 - - 24/01/2007 06/08/2014 Chromosome The Genome Assembly Team SAMN02953672 Erinaceus europaeus 9365 PRJNA74585 74585 GCA_000296755.1 AMDU01 5803 22541 29382 10/09/2012 01/11/2013 Scaffold Broad Institute SAMN00760989 Eschrichtius robustus 9764 PRJNA384396 384396 GCA_002189225.1 NIPP01 57203 - - 09/06/2017 09/06/2017 Scaffold Purdue University SAMN06837692 Falco peregrinus 8954 PRJNA347893 347893 GCA_001887755.1 MLQY01 72 - - 29/11/2016 02/12/2016 Chromosome Royal Veterinary College SAMN02981425 Felis catus 9685 PRJNA16726 16726 GCA_000181335.4 AANG04 4525 13 13 27/04/2006 20/11/2017 Chromosome International Cat Genome Sequencing Consortium SAMN02953640 Gallus gallus 9031 PRJNA13342 13342 GCA_000002315.3 AADN04 23870 25062 46393 29/02/2004 04/01/2016 Chromosome Genome Reference Consortium SAMN02981218 Gorilla gorilla gorilla 9595 PRJEB10880 314199 GCA_900006655.3 CYUI03 15745 - - 04/03/2016 16/04/2016 Chromosome UNIVERSITY OF WASHINGTON SAMEA3541598 Heterocephalus glaber 10181 PRJNA72441 72441 GCA_000247695.1 AHKG01 4229 37344 60814 15/02/2012 18/02/2015 Scaffold Broad Institute SAMN00714537 Ictidomys tridecemlineatus 43179 PRJNA61725 61725 GCA_000236235.1 AGTP01 12483 25998 38592 25/11/2011 01/11/2013 Scaffold Broad Institute SAMN00210855 Kryptolebias marmoratus 37003 PRJNA326783 326783 GCA_001649575.1 LWHD01 3073 23485 38516 22/05/2016 22/05/2016 Scaffold NCBI SAMN04622665 Larimichthys crocea 215358 PRJNA354443 354443 GCA_000972845.1 JRPU01 6014 27103 41060 16/04/2015 21/04/2015 Scaffold NCBI SAMN03092871 Lates calcarifer 8187 PRJNA345597 345597 GCA_001640805.1 LLXD01 3808 30224 45223 09/05/2016 09/05/2016 Scaffold NCBI SAMN04026617 Latimeria chalumnae 7897 PRJNA56111 56111 GCA_000225785.1 AFYH01 22819 26117 34251 09/09/2011 06/11/2013 Scaffold Broad Institute SAMN00138723 Lycaon pictus 9622 PRJNA304992 304992 GCA_001883655.1 LPRA01 813 - - 18/11/2016 01/12/2016 Chromosome Smithsonian Institution SAMN04312209 Macaca mulatta 9544 PRJNA214746 214746 GCA_000772875.3 JSUE03 286263 33218 55366 04/11/2014 30/11/2015 Chromosome Baylor College of Medicine Genome Sequencing Center - Manacus vitellinus 328815 PRJNA253835 253835 GCA_000692015.2 JMFM02 92755 15177 12843 13/05/2014 17/11/2016 Scaffold NCBI SAMN02299332 Mustela putorius furo 9669 PRJNA59869 59869 GCA_000215625.1 AEYP01 7783 27321 48107 01/06/2011 04/08/2014 Scaffold Ferret Genome Sequencing Consortium SAMN00149631 Nothobranchius furzeri 105023 PRJEB5837 304522 GCA_001465895.2 CCSH01 6013 25026 36873 01/12/2015 02/02/2016 Chromosome LEIBNIZ INSTITUTE FOR AGE RESEARCH - FRITZ LIPMANN SAMEA2698544 Ochotona princeps 9978 PRJNA74593 74593 GCA_000292845.1 ALIT01 10421 21374 25691 13/08/2012 01/11/2013 Scaffold Broad Institute SAMN00767999 Oncorhynchus mykiss 8022 PRJNA390662 390662 GCA_002163495.1 MSJN01 139800 51001 71266 31/05/2017 02/06/2017 Chromosome NCBI SAMN05449231 Oreochromis niloticus 8128 PRJNA354796 354796 GCA_001858045.2 MKQE01 2567 37427 58088 31/10/2016 21/11/2016 Chromosome NCBI SAMN05859795 Ornithorhynchus anatinus 9258 PRJNA12885 12885 GCF_000002275.2 AAPN01 200283 22225 24786 10/04/2006 06/08/2014 Chromosome Washington University (WashU) SAMN02953646 Oryzias latipes 8090 PRJNA325079 325079 GCA_002234675.1 - 25 26846 44766 22/12/2012 15/02/2018 Chromosome The University of Tokyo SAMN06689957 Ovis aries 9940 PRJNA179263 179263 GCA_000298735.2 AMGL02 5466 29110 43046 21/09/2012 20/11/2015 Chromosome NCBI SAMN00116405 Paralichthys olivaceus 8255 PRJNA369269 369269 GCA_001970005.2 MPLB01 9525 24567 36123 24/01/2017 24/01/2017 Scaffold NCBI SAMN05817825 Petromyzon marinus 7757 PRJNA357048 357048 GCA_002833325.1 PIZI01 12061 - - 11/12/2017 11/12/2017 Scaffold University of Kentucky SAMN06131802 Pongo abelii 9601 PRJNA20869 20869 GCA_000001545.3 ABGA01 79345 - - 14/11/2007 11/08/2014 Chromosome Orangutan Genome Sequencing Consortium SAMN02981238 Rattus norvegicus 10116 PRJNA10629 10629 GCA_000001895.4 AABR07 1395 39365 56113 27/11/2002 01/07/2014 Chromosome Rat Genome Sequencing Consortium SAMN02808228 Sarcophilus harrisii 9305 PRJNA51853 51853 GCA_000189315.1 AEFK01 35974 23887 30037 09/02/2011 06/08/2014 Scaffold Wellcome Trust Sanger Institute SAMN02953780 Scleropages formosus 113540 PRJNA347920 347920 GCA_001624265.1 LGSG01 4819 24709 41445 19/04/2016 08/11/2016 Scaffold NCBI SAMN03894411 Sus scrofa 9823 PRJNA13421 13421 GCA_000003025.6 AEMK02 706 30173 63577 11/07/2008 06/12/2016 Chromosome The Swine Genome Sequencing Consortium (SGSC) SAMN02953785 Taeniopygia guttata 59729 PRJNA17289 17289 GCA_000151805.2 ABQF01 37422 17357 19447 03/09/2008 11/08/2014 Chromosome Washington University Genome Sequencing Center SAMN02981239 Tursiops truncatus 9739 PRJNA359990 359990 GCA_001922835.1 MRVK01 2648 23994 38849 28/12/2016 28/12/2016 Scaffold NCBI SAMN06114300 Xiphophorus maculatus 8083 PRJNA72525 72525 GCA_000241075.1 AGAJ01 20632 - - 03/01/2012 11/08/2014 Scaffold The Genome Institute, Washington University at St. Louis SAMN02981361 Zonotrichia albicollis 44394 PRJNA217032 217032 GCA_000385455.1 ARWJ01 6018 15943 23892 26/04/2013 11/08/2014 Scaffold NCBI SAMN02981528 Physeter catodon 9755 PRJNA434122 434122 GCA_002837175.1 PGGR01 59238 26942 38099 12/12/2017 12/12/2017 Scaffold NCBI SAMN07836523 Ficedula albicollis 59894 PRJNA208061 208061 GCA_000247815.2 AGTO02 21836 16785 26464 30/11/2012 11/08/2014 Chromosome NCBI SAMN02981387