Additional data table S3. Results of BONITA pathway analysis. Log10 p-values provided for several contrasts.,,,,,
code,pathway,094-Durable vs Transient,105-T2 -Durable vs Transient,105-T3 -Durable vs Transient,205-T4 -Durable vs Transient
10,Glycolysis / Gluconeogenesis,0.003356486,0.017293261,0.002631789,0.003964428
20,Citrate cycle (TCA cycle),0.004006987,0.03081557,0.026958873,0.002782427
190,Oxidative phosphorylation,0.006415068,0.04793037,0.001074306,0.006593252
3018,RNA degradation,0.171987529,0.109325191,0.109521878,0.140667527
3320,PPAR signaling pathway,0.047842943,0.488395268,0.235645356,0.107104836
4012,ErbB signaling pathway,0.595187964,0.010315431,0.066338768,0.016863962
4060,Cytokine-cytokine receptor interaction,0.968178817,0.328886845,0.607060106,0.034628337
4110,Cell cycle,0.218854602,0.03016328,0.001148907,0.003552124
4144,Endocytosis,0.014529118,0.015647494,0.035331703,0.003298248
4150,mTOR signaling pathway,0.022393399,0.005778602,0.001567135,0.006548331
4210,Apoptosis,0.263792084,0.071098367,0.208936078,0.078498286
4350,TGF-beta signaling pathway,0.605512343,0.036353038,0.080702206,0.04411635
4370,VEGF signaling pathway,0.240706172,0.019918235,0.10663583,0.013770034
4514,Cell adhesion molecules (CAMs),0.076467398,0.112447418,0.054399923,0.035905631
4610,Complement and coagulation cascades,0.236933486,0.977557083,0.365813087,0.161926719
4612,Antigen processing and presentation,0.12918829,0.166844963,0.395458692,0.076945743
4620,Toll-like receptor signaling pathway,0.711382991,0.068015282,0.611402448,0.171198939
4621,NOD-like receptor signaling pathway,0.522325581,0.034565373,0.058794274,0.037427189
4622,RIG-I-like receptor signaling pathway,3.405099129,0.048238982,0.151145613,0.178617104
4623,Cytosolic DNA-sensing pathway,3.349448487,0.100137694,0.544112631,0.122999459
4650,Natural killer cell mediated cytotoxicity,0.05579823,0.151124531,0.05615834,0.007951331
4660,T cell receptor signaling pathway,0.559127561,0.031430849,0.404430395,0.138921624
4662,B cell receptor signaling pathway,0.94604119,0.023492595,0.442749901,0.11122722
4664,Fc epsilon RI signaling pathway,0.05603169,0.02742935,0.021928766,0.005932415
4666,Fc gamma R-mediated phagocytosis,0.029557108,0.022977732,0.165239814,0.001586123
4672,Intestinal immune network for IgA production,0.254735676,0.216648655,0.167849346,0.044936118