# Supplementary Table S6 - Fecal samples metadata SampleID Type SequencingRun ChickID FaNr Group Sex AgeDay AgeWeek AgeDied Weight WeightPM WeightHatch CauseDeath EnvSample ID_week ShannonRaw Faith Rich AgeDiedWk NoObs Enterobacteriaceae Peptostreptococcaceae Ruminococcaceae Porphyromonadaceae Clostridiaceae Lactobacillaceae Turicibacteraceae S24 Lachnospiraceae AgeWeekF AgeDiedWkF Survival E.run1.Fa.na.1027.667.S Feces Run1 1027 667 2 M 42 6 43 5.5 6.5 0.88 Control Animal 1027_6 4.084254822 103.7581674 389 6 1 0 0 2485.244397 24.05988311 1044.481985 15.56815966 138.6981497 39.62804277 389.2039916 6 6 1 E.run1.Fa.na.1030.602.S Feces Run1 1030 602 1 F 28 4 29 3.3 3.1 1.005 Control Animal 1030_4 3.912885949 97.763912 324 4 1 37.74471264 5.806878868 1752.225698 18.87235632 423.9021574 17.4206366 274.3750265 0 1627.377803 4 4 1 E.run1.Fa.na.1031.535.rep1 Feces Run1 1031 535 3 F 28 4 29 2.9 2.8 0.737 Control Animal 1031_4 NA NA NA 4 1 NA NA NA NA NA NA NA NA NA 4 4 1 E.run1.Fa.na.1064.570.S Feces Run1 1064 570 2 F 28 4 29 2.3 2.4 0.871 Control Animal 1064_4 4.201276764 181.6365091 370 4 1 0 0 4803.961614 10.12883473 224.2813404 26.04557502 141.8036862 131.6748515 824.7765422 4 4 1 E.run1.Fa.na.1085.743.S Feces Run1 1085 743 4 M 42 6 43 5 4.7 0.772 Control Animal 1085_6 3.6697112 73.57477674 296 6 1 0 13.60065946 1753.125005 4.080197839 3873.467815 80.24389083 1218.619087 0 1849.689686 6 6 1 E.run1.Fa.na.1094.612.rep1 Feces Run1 1094 612 1 F 28 4 29 2.1 1.9 0.99 Control Animal 1094_4 NA NA NA 4 1 NA NA NA NA NA NA NA NA NA 4 4 1 E.run1.Fa.na.1100.636.rep1 Feces Run1 1100 636 1 M 42 6 43 3 3 0.985 Control Animal 1100_6 NA NA NA 6 1 NA NA NA NA NA NA NA NA NA 6 6 1 E.run1.Fa.na.1117.647.rep1 Feces Run1 1117 647 1 M 42 6 43 4.2 4.2 0.78 Control Animal 1117_6 4.390767867 50.68804802 438 6 1 31.87083995 41.83047743 2837.500719 2.987891245 2777.742894 6.971746238 1933.165635 73.70131738 783.8234699 6 6 1 E.run1.Fa.na.1125.666.S Feces Run1 1125 666 2 M 42 6 43 3.3 3 0.89 Control Animal 1125_6 3.810914371 72.09399228 387 6 1 754.6516983 22.99118077 3498.716744 16.22906878 2362.68193 25.69602557 999.4401524 8.11453439 279.9514364 6 6 1 E.run1.Fa.na.1136.708.S Feces Run1 1136 708 3 M 42 6 43 6.1 6 0.918 Control Animal 1136_6 4.04109958 89.94016426 344 6 1 65.33146197 0 4016.718278 3.499899748 2791.753366 24.49929824 389.6555053 16.33286549 421.154603 6 6 1 E.run1.Fa.na.1137.706.S Feces Run1 1137 706 3 M 42 6 43 6.3 6 1.065 Control Animal 1137_6 3.424455935 144.4982818 321 6 1 0 1.447532945 1889.030493 0 5817.634905 0 1631.369629 17.37039534 616.6490345 6 6 1 E.run1.Fa.na.1165.637.rep1 Feces Run1 1165 637 1 F 42 6 43 3.1 3.1 0.726 Control Animal 1165_6 NA NA NA 6 1 NA NA NA NA NA NA NA NA NA 6 6 1 E.run1.Fa.na.1183.573.rep1 Feces Run1 1183 573 2 M 28 4 29 2.3 2.3 0.854 Control Animal 1183_4 4.673684385 147.3840409 460 4 1 0 6.688733961 3792.512156 0 537.7742105 5.350987169 666.1979025 12.03972113 1056.819966 4 4 1 E.run1.Fa.na.1185.446.S Feces Run1 1185 446 4 M 28 4 29 2.7 2.8 0.78 Control Animal 1185_4 4.224717948 49.58152865 325 4 1 9.787365885 0 3788.798082 2.174970197 86.99880786 0 80.47389728 430.6440989 1313.681999 4 4 1 E.run1.Fa.na.1189.445.S Feces Run1 1189 445 4 F 28 4 29 2.1 1.8 0.612 Control Animal 1189_4 4.675805681 78.86582847 410 4 1 24.97755708 0 4839.699038 4.757629921 442.4595827 28.54577953 116.561933 45.19748425 1020.511618 4 4 1 E.run1.Fa.na.1193.507.rep1 Feces Run1 1193 507 3 F 28 4 29 3.2 3.6 0.828 Control Animal 1193_4 4.294763161 61.62188111 344 4 1 49.42907878 2.149090382 2377.968507 60.17453069 370.7180908 47.2799884 91.33634122 2768.028411 1495.766906 4 4 1 E.run1.Fa.na.1207.495.S Feces Run1 1207 495 3 M 28 4 29 3.2 3.4 0.752 Control Animal 1207_4 4.143086431 40.2969507 364 4 1 57.45010953 0 1926.268379 6.758836416 393.1389849 9.011781888 238.81222 488.8891674 1158.013973 4 4 1 E.run1.Fa.na.1212.742.S Feces Run1 1212 742 4 M 42 6 43 3.4 3.1 0.973 Control Animal 1212_6 4.649382279 111.0640273 436 6 1 4.800217904 1.200054476 4195.390448 0 514.8233702 115.2052297 229.2104049 10.80049028 639.6290357 6 6 1 E.run1.Fa.na.1222.465.S Feces Run1 1222 465 4 F 28 4 29 2.5 2.7 0.857 Control Animal 1222_4 4.44498965 79.67563268 382 4 1 4.301693319 1.07542333 2685.332055 2.15084666 225.8388992 17.20677328 197.8778927 10.7542333 824.849694 4 4 1 E.run1.Fa.na.1224.665.rep1 Feces Run1 1224 665 2 M 42 6 43 4 3.6 0.774 Control Animal 1224_6 NA NA NA 6 1 NA NA NA NA NA NA NA NA NA 6 6 1 E.run2.Fa.na.1019.283.S Feces Run2 1019 283 1 F 14 2 NA 1.3 NA 0.891 Survived Animal 1019_2 3.716410618 72.90003849 385 NA 5 4492.409102 3.042950396 4007.565672 8.11453439 390.5119674 2.028633597 8.11453439 406.7410363 1667.536817 2 NA 1 E.run2.Fa.na.1020.312.S Feces Run2 1020 312 2 M 14 2 57 1.56 7.3 0.886 Control Animal 1020_2 3.897724213 43.60041534 321 8 5 46.30882868 0 3220.340978 147.6876158 284.1109219 37.54769893 0 163.9582853 1173.991387 2 8 1 E.run2.Fa.na.1020.615.S Feces Run2 1020 615 2 M 28 4 57 1.7 7.3 0.886 Control Animal 1020_4 4.645022851 61.15945888 420 8 5 0 22.96238655 3537.973866 7.065349707 608.5032436 0 924.677643 16.78020555 1993.311786 4 8 1 E.run2.Fa.na.1020.670.S Feces Run2 1020 670 2 M 42 6 57 4 7.3 0.886 Control Animal 1020_6 4.915653596 74.4447375 404 8 5 0 0 2409.613352 15.76972089 481.5021445 35.74470069 285.9576055 65.18151302 600.3007086 6 8 1 E.run2.Fa.na.1021.173.S Feces Run2 1021 173 4 M 7 1 30 0.95 1.8 0.85 Disease Animal 1021_1 3.87834968 38.23831846 175 5 3 0 10.01226551 960.1762622 8.009812406 94.11529577 0 14.01717171 0 1649.020129 1 5 0 E.run2.Fa.na.1021.466.S Feces Run2 1021 466 4 M 28 4 30 2.2 1.8 0.85 Disease Animal 1021_4 4.487556546 32.9922993 187 5 3 0 0 943.9583614 0 68.23795385 4.549196923 13.64759077 232.0090431 345.7389662 4 5 0 E.run2.Fa.na.1022.294.S Feces Run2 1022 294 2 M 14 2 46 1.92 5.2 0.784 Disease Animal 1022_2 4.21036073 61.78628856 405 7 4 0 0 6433.633084 55.62490503 254.5546502 10.37074501 0 97.10788506 979.5640056 2 7 0 E.run2.Fa.na.1024.227.S Feces Run2 1024 227 4 M 7 1 76 1.14 10.1 1.01 Disease Animal 1024_1 3.946807782 62.52026374 251 11 5 254.6326769 65.65441845 2446.070698 172.121043 1117.012335 0 91.3838527 0 632.5891939 1 11 0 E.run2.Fa.na.1024.747.S Feces Run2 1024 747 4 M 42 6 76 4.6 10.1 1.01 Disease Animal 1024_6 4.696691745 67.39586052 622 11 5 23.06071655 17.8196446 4554.491518 5.241071943 3745.27001 31.44643166 1416.137639 181.3410892 1063.937604 6 11 0 E.run2.Fa.na.1025.228.S Feces Run2 1025 228 2 M 7 1 48 0.78 2.2 0.896 Disease Animal 1025_1 4.001150765 136.1040513 399 7 4 25.23231871 0.970473796 2938.594656 7.763790372 462.9160009 0 50.46463741 132.9549101 1768.203257 1 7 0 E.run2.Fa.na.1025.574.S Feces Run2 1025 574 2 M 28 4 48 1.6 2.2 0.896 Disease Animal 1025_4 4.454156275 71.79885158 515 7 4 351.3096922 4.169847978 4036.412843 4.169847978 241.8511827 7.297233962 158.4542232 65.67510566 1979.635328 4 7 0 E.run2.Fa.na.1025.671.S Feces Run2 1025 671 2 M 42 6 48 2.9 2.2 0.896 Disease Animal 1025_6 4.876130876 114.5638519 595 7 4 15.33364505 5.111215017 4888.025295 32.37102844 1389.398616 22.14859841 203.5967315 71.55701025 511.9733709 6 7 0 E.run2.Fa.na.1028.309.S Feces Run2 1028 309 2 M 14 2 22 1.16 0.91 0.71 Disease Animal 1028_2 4.133302805 45.26010822 377 3 2 0 0 7189.657857 77.54776017 145.2906311 155.9868739 1.78270713 70.41693165 1027.730661 2 3 0 E.run2.Fa.na.1033.549.S Feces Run2 1033 549 2 F 28 4 84 3 22 0.896 Control Animal 1033_4 3.728897608 28.97743257 74 12 6 0 0 169.1713062 0 0.275972767 0 9.935019612 9.935019612 196.2166373 4 12 1 E.run2.Fa.na.1033.93.S Feces Run2 1033 93 2 F 7 1 84 1.02 22 0.896 Control Animal 1033_1 3.247224853 96.07917311 200 12 6 107.7505292 0 1715.999982 45.86677931 212.5888819 0 8.736529392 0 1779.33982 1 12 1 E.run2.Fa.na.1034.373.S Feces Run2 1034 373 4 F 14 2 57 1.82 8.8 0.817 Control Animal 1034_2 4.216245668 50.57203352 369 8 5 0 0 4558.278813 56.73300581 273.4821818 3.636731141 0 7.273462283 1123.022576 2 8 1 E.run2.Fa.na.1035.290.S Feces Run2 1035 290 2 M 14 2 NA 1.98 NA 0.768 Survived Animal 1035_2 4.685061724 51.62661859 390 NA 6 0 0 3123.499893 32.81155409 200.8707336 2.400845421 0 420.1479487 1309.261036 2 NA 1 E.run2.Fa.na.1035.543.S Feces Run2 1035 543 2 M 28 4 NA 3.7 NA 0.768 Survived Animal 1035_4 4.937580282 52.49532661 540 NA 6 14.48855922 8.149814559 5415.099007 0 1223.377719 6.338744657 1023.254495 5.433209706 2547.269817 4 NA 1 E.run2.Fa.na.1035.675.S Feces Run2 1035 675 2 M 42 6 NA 8 NA 0.768 Survived Animal 1035_6 4.620401815 50.68769448 551 NA 6 0 0 3839.552898 6.365909588 4273.344165 0 501.0880261 391.9581475 1214.0699 6 NA 1 E.run2.Fa.na.1039.252.S Feces Run2 1039 252 1 M 14 2 23 1.4 1.17 0.705 Disease Animal 1039_2 3.800703691 56.02491353 345 4 2 2.337894637 1.168947319 2505.054104 7.013683912 93.51578549 0 0 687.3410233 772.6741775 2 4 0 E.run2.Fa.na.1042.68.S Feces Run2 1042 68 2 M 7 1 NA 0.98 NA 0.873 Survived Animal 1042_1 3.893109081 56.97167028 205 NA 6 3.240114035 0 1875.215998 12.96045614 373.4231426 0 8.100285088 0 1786.112862 1 NA 1 E.run2.Fa.na.1045.269.S Feces Run2 1045 269 1 M 14 2 22 1.8 1.9 0.731 Disease Animal 1045_2 4.502118524 63.57897273 409 3 2 58.71514543 5.150451353 5590.299899 6.180541624 186.446339 0 4.120361083 701.4914743 590.2417251 2 3 0 E.run2.Fa.na.1048.135.S Feces Run2 1048 135 3 M 7 1 57 0.86 9.7 0.742 Control Animal 1048_1 2.847920662 95.62740955 193 8 5 28.10907182 0 1305.711723 0 29.92256033 0 1.813488505 0 2009.345263 1 8 1 E.run2.Fa.na.1048.353.S Feces Run2 1048 353 3 M 14 2 57 1.39 9.7 0.742 Control Animal 1048_2 4.630930458 81.71440913 484 8 5 17.12780358 0 4163.198123 111.90165 221.5195929 15.98595001 29.68819287 135.880575 1832.674983 2 8 1 E.run2.Fa.na.1053.132.S Feces Run2 1053 132 3 M 7 1 57 1.2 8 0.889 Control Animal 1053_1 3.720136677 76.51435979 249 8 5 668.9390009 2.150929263 1765.195949 1.433952842 398.6388901 0 17.92441053 0 1621.800665 1 8 1 E.run2.Fa.na.1053.517.S Feces Run2 1053 517 3 M 28 4 57 4.4 8 0.889 Control Animal 1053_4 3.612701213 67.02690975 366 8 5 2859.979177 0 2366.342218 8.38703571 524.7888058 11.98147959 31.15184692 20.36851529 779.9943211 4 8 1 E.run2.Fa.na.1053.781.S Feces Run2 1053 781 3 M 42 6 57 6.6 8 0.889 Control Animal 1053_6 4.37974131 89.68221237 529 8 5 3.092954199 2.061969466 4440.451245 2.061969466 4717.786138 25.77461833 720.6583285 35.05348092 556.7317559 6 8 1 E.run2.Fa.na.1055.388.S Feces Run2 1055 388 4 F 14 2 37 1.49 1.6 0.937 Disease Animal 1055_2 4.235547832 45.82529153 318 6 3 0 0 2298.504633 48.97878974 55.9757597 12.82777826 0 2.332323321 1687.435923 2 6 0 E.run2.Fa.na.1055.478.S Feces Run2 1055 478 4 F 28 4 37 2.3 1.6 0.937 Disease Animal 1055_4 3.768189913 48.69931222 377 6 3 412.1884772 0 1435.342715 0 107.3153432 45.12122384 68.29158202 36.58477608 1204.858626 4 6 0 E.run2.Fa.na.1057.104.S Feces Run2 1057 104 2 F 7 1 84 1.03 16 0.8 Control Animal 1057_1 3.364825778 98.92896569 204 12 6 29.15189268 0 1677.558915 0 261.041948 0 1.325086031 0 1876.32182 1 12 1 E.run2.Fa.na.1057.557.S Feces Run2 1057 557 2 F 28 4 84 1.9 16 0.8 Control Animal 1057_4 4.884598866 67.16255548 475 12 6 7.402656638 2.961062655 3126.141898 7.402656638 492.2766664 0 477.4713532 81.42922302 2385.876235 4 12 1 E.run2.Fa.na.1058.243.S Feces Run2 1058 243 1 F 14 2 33 1.6 2.5 0.894 Disease Animal 1058_2 4.08007227 72.65161734 389 5 3 943.2793011 1.907541559 3510.83024 23.84426949 353.8489593 0 1.907541559 188.8466144 813.566475 2 5 0 E.run2.Fa.na.1063.500.S Feces Run2 1063 500 3 F 28 4 44 3.8 4.7 0.894 Disease Animal 1063_4 4.898322015 72.38560551 501 7 4 0 0 3255.448919 1.470392466 1024.863549 12.49833596 1777.704491 30.14304555 2032.817584 4 7 0 E.run2.Fa.na.1063.713.S Feces Run2 1063 713 3 F 42 6 44 5.6 4.7 0.894 Disease Animal 1063_6 4.096406186 75.39273196 544 7 4 0 13.52468928 4191.613315 8.322885709 5996.639153 2.080721427 2676.848116 29.13009998 935.2842815 6 7 0 E.run2.Fa.na.1068.301.S Feces Run2 1068 301 2 M 14 2 57 1.48 6.8 0.734 Control Animal 1068_2 4.554012535 77.54946289 394 8 5 301.5195123 4.674721122 3333.85528 134.0086722 206.4668495 1.558240374 0 567.9786163 1509.934922 2 8 1 E.run2.Fa.na.1068.539.S Feces Run2 1068 539 2 M 28 4 57 2.2 6.8 0.734 Control Animal 1068_4 4.603040492 78.12036443 365 8 5 10.25514012 0 2608.651269 0 121.779789 2.563785031 32.04731289 584.5429871 1263.94602 4 8 1 E.run2.Fa.na.1068.681.S Feces Run2 1068 681 2 M 42 6 57 3.7 6.8 0.734 Control Animal 1068_6 4.872744709 93.22741485 538 8 5 2.499479849 0 3333.472959 18.3295189 752.3434345 14.9968791 951.4686626 206.6236675 1023.953578 6 8 1 E.run2.Fa.na.1070.282.S Feces Run2 1070 282 1 M 14 2 29 1.67 1.6 0.903 Disease Animal 1070_2 4.263357475 51.90348021 330 4 3 7.142977417 10.71446613 2821.47608 0 155.3597588 0 26.78616532 178.5744354 530.3660732 2 4 0 E.run2.Fa.na.1070.588.S Feces Run2 1070 588 1 M 28 4 29 1.7 1.6 0.903 Disease Animal 1070_4 3.837817486 86.4432258 446 4 3 1879.843693 97.49036849 2993.527786 67.66978519 404.8717657 3.440836535 223.6543747 8.028618582 1571.315351 4 4 0 E.run2.Fa.na.1071.212.S Feces Run2 1071 212 4 F 7 1 NA 1.19 NA 0.874 Survived Animal 1071_1 3.65694375 99.27765128 253 NA 6 7.153280848 0 1606.308955 601.6704002 383.8927388 0 18.28060662 0 1664.330011 1 NA 1 E.run2.Fa.na.1071.406.S Feces Run2 1071 406 4 F 14 2 NA 1.88 NA 0.874 Survived Animal 1071_2 4.61490368 45.72763456 368 NA 6 2.899209132 0 3096.355352 22.46887077 306.5913657 7.248022829 0 138.437236 1830.850566 2 NA 1 E.run2.Fa.na.1071.481.S Feces Run2 1071 481 4 F 28 4 NA 3 NA 0.874 Survived Animal 1071_4 4.687839565 53.21568856 475 NA 6 425.5807657 128.0442999 2471.329003 7.401404621 506.9962166 1.480280924 232.4041051 178.3738514 3869.454335 4 NA 1 E.run2.Fa.na.1071.788.S Feces Run2 1071 788 4 F 42 6 NA 4.7 NA 0.874 Survived Animal 1071_6 4.571506546 105.8440896 458 NA 6 0 34.62637871 4706.953545 0 2028.435604 2.233959917 1345.96085 37.97731859 1134.851638 6 NA 1 E.run2.Fa.na.1072.392.S Feces Run2 1072 392 4 F 14 2 31 1.7 2.2 0.922 Disease Animal 1072_2 4.428605581 52.51918984 386 5 3 16.72596144 0 2971.994273 27.17968734 186.076321 4.181490359 0 79.44831683 901.1111725 2 5 0 E.run2.Fa.na.1072.474.S Feces Run2 1072 474 4 F 28 4 31 2.9 2.2 0.922 Disease Animal 1072_4 4.60978643 75.93037413 431 5 3 5.27870619 0 5239.115893 1.75956873 209.3886789 14.07654984 1.75956873 939.6097017 921.13423 4 5 0 E.run2.Fa.na.1076.370.S Feces Run2 1076 370 4 M 14 2 27 1.32 1.8 0.827 Disease Animal 1076_2 4.506362195 33.88987432 350 4 2 42.1970575 0 3511.043402 32.26833809 289.1739528 3.723269779 2.482179853 7.446539559 3058.045579 2 4 0 E.run2.Fa.na.1078.129.S Feces Run2 1078 129 3 M 7 1 NA 1.11 NA 0.758 Survived Animal 1078_1 3.950493985 78.62537219 280 NA 6 107.1384479 0 2380.945969 0 158.2352462 3.296567628 9.065560977 0 1634.273402 1 NA 1 E.run2.Fa.na.1078.333.S Feces Run2 1078 333 3 M 14 2 NA 1.65 NA 0.758 Survived Animal 1078_2 3.911751621 31.82180136 271 NA 6 4.619418439 0 2633.838413 661.3467398 52.35340898 3.849515366 0 69.29127659 4641.745628 2 NA 1 E.run2.Fa.na.1078.734.S Feces Run2 1078 734 3 M 42 6 NA 9.6 NA 0.758 Survived Animal 1078_6 4.57817046 92.3288121 595 NA 6 56.54626307 9.873157044 6757.727217 12.56583624 2005.14844 11.66827651 1097.715551 205.5411785 1374.163949 6 NA 1 E.run2.Fa.na.1080.23.S Feces Run2 1080 23 1 F 7 1 29 0.88 0.85 0.801 Disease Animal 1080_1 3.638160933 56.2131416 229 4 2 7.064402059 0.706440206 2933.846175 87.59858553 281.163202 0 6.357961853 0 4237.228355 1 4 0 E.run2.Fa.na.1081.278.S Feces Run2 1081 278 1 M 14 2 57 2.5 10.8 0.938 Control Animal 1081_2 4.421164905 49.30324486 368 8 5 2.435577711 0 3266.10971 8.118592369 242.7459118 0 0 134.7686333 882.4909905 2 8 1 E.run2.Fa.na.1081.600.S Feces Run2 1081 600 1 M 28 4 57 4.2 10.8 0.938 Control Animal 1081_4 4.419896914 60.06833379 455 8 5 0 30.4486861 3755.337952 3.69074983 648.6492827 16.60837424 600.6695349 53.51587254 1635.002175 4 8 1 E.run2.Fa.na.1083.106.S Feces Run2 1083 106 2 M 7 1 33 0.78 1.1 0.861 Disease Animal 1083_1 3.35718033 112.4745694 268 5 3 169.2059747 2.155490123 2858.179903 21.55490123 273.7472456 0 2.155490123 15.08843087 2205.066396 1 5 0 E.run2.Fa.na.1083.285.S Feces Run2 1083 285 2 M 14 2 33 1.13 1.1 0.861 Disease Animal 1083_2 4.591998004 41.03119129 325 5 3 76.08144321 0 2007.10093 174.8061731 254.5105422 35.32352721 0 67.92986001 1527.063253 2 5 0 E.run2.Fa.na.1084.153.S Feces Run2 1084 153 3 M 7 1 NA 0.97 NA 0.901 Survived Animal 1084_1 2.965882395 76.47756081 178 NA 6 7.752053742 1.107436249 1953.517543 0 299.0077872 0 7.752053742 0 3684.4404 1 NA 1 E.run2.Fa.na.1084.617.rep1 Feces Run2 1084 617 3 M 28 4 NA 3.1 NA 0.901 Survived Animal 1084_4 4.132100942 49.84972887 355 NA 6 0 3.112120537 2100.681363 0 1846.524852 102.6999777 3759.441609 509.3503946 728.2362057 4 NA 1 E.run2.Fa.na.1086.311.S Feces Run2 1086 311 2 F 14 2 NA 1.27 NA 0.992 Survived Animal 1086_2 4.390813185 60.62080749 401 NA 6 125.3250328 17.78806917 3678.087575 48.51291591 138.2618103 145.5387477 0 46.08727012 1310.657278 2 NA 1 E.run2.Fa.na.1089.113.S Feces Run2 1089 113 2 F 7 1 NA 1.15 NA 0.889 Survived Animal 1089_1 2.708487619 70.07557382 169 NA 5 124.8444147 2.90335848 1070.371493 185.8149427 213.8807414 0 39.67923256 0 2058.481163 1 NA 1 E.run2.Fa.na.1089.322.S Feces Run2 1089 322 2 F 14 2 NA 1.43 NA 0.889 Survived Animal 1089_2 4.529174808 49.54948889 366 NA 5 32.24368894 2.249559694 4373.144045 46.49090034 155.2196189 0 0 326.1861556 1377.480386 2 NA 1 E.run2.Fa.na.1089.555.S Feces Run2 1089 555 2 F 28 4 NA 2.2 NA 0.889 Survived Animal 1089_4 4.45620624 97.14721294 462 NA 5 0 6.822882029 3097.588441 5.848184596 507.8173624 5.848184596 589.6919467 54.58305623 2918.244113 4 NA 1 E.run2.Fa.na.1090.267.S Feces Run2 1090 267 1 M 14 2 35 1.5 2.3 0.78 Disease Animal 1090_2 4.727894279 68.33618074 478 5 3 349.319463 8.219281483 3648.333568 6.164461112 288.7022621 2.054820371 0 395.5529213 1339.742882 2 5 0 E.run2.Fa.na.1091.470.S Feces Run2 1091 470 4 F 28 4 NA 2.8 NA 0.833 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Feces Run2 1159 508 3 F 28 4 NA 2.4 NA 0.865 Survived Animal 1159_4 4.807849828 47.08229317 396 NA 6 7.031000693 0 3265.899822 5.859167245 244.9131908 21.09300208 83.20017488 46.87333796 1285.501293 4 NA 1 E.run2.Fa.na.1160.145.S Feces Run2 1160 145 3 F 7 1 47 1.06 2 1.035 Disease Animal 1160_1 2.95141765 129.3277084 260 7 4 51.39815683 2.336279856 2604.952039 69.30963573 408.8489748 0 28.03535827 0 2474.899127 1 7 0 E.run2.Fa.na.1160.410.S Feces Run2 1160 410 3 F 14 2 47 1.33 2 1.035 Disease Animal 1160_2 3.978503814 80.43622387 377 7 4 0 0 4249.472574 17.03422999 57.91638195 17.03422999 0 295.2599865 1368.416476 2 7 0 E.run2.Fa.na.1163.354.S Feces Run2 1163 354 3 F 14 2 35 1.3 1.3 0.73 Disease Animal 1163_2 4.490542012 42.25881596 353 5 3 16.66444794 0 3736.757386 17.64470958 379.3612561 0 0 103.9077342 1391.971534 2 5 0 E.run2.Fa.na.1164.237.S Feces Run2 1164 237 1 F 14 2 NA 1.69 NA 1.058 Survived Animal 1164_2 4.47962646 53.17635002 378 NA 6 105.7927209 0 3342.42151 48.1828234 172.8296926 2.094905365 0 488.11295 2175.559222 2 NA 1 E.run2.Fa.na.1164.35.S Feces Run2 1164 35 1 F 7 1 NA 1.09 NA 1.058 Survived Animal 1164_1 3.373287875 76.02655051 241 NA 6 630.9163384 0.781804632 1666.025672 203.2692044 495.664137 0 4.690827795 0 1453.374812 1 NA 1 E.run2.Fa.na.1164.641.S Feces Run2 1164 641 1 F 42 6 NA 4.3 NA 1.058 Survived Animal 1164_6 4.418117421 83.49177404 405 NA 6 15.36993584 0 3709.687715 22.13270761 308.6283118 0 218.253089 20.28831531 693.4915052 6 NA 1 E.run2.Fa.na.1175.171.S Feces Run2 1175 171 3 M 7 1 46 0.81 3.6 0.89 Disease Animal 1175_1 2.138334716 65.70000041 185 7 4 54.10188222 15.62943264 1323.692718 0 69.73131486 0 0 0 1275.602156 1 7 0 E.run2.Fa.na.1175.411.S Feces Run2 1175 411 3 M 14 2 46 0.92 3.6 0.89 Disease Animal 1175_2 3.541218001 47.82148134 221 7 4 13.1123806 0 1665.272337 19.6685709 137.6799963 0 0 0 906.3933092 2 7 0 E.run2.Fa.na.1175.518.S Feces Run2 1175 518 3 M 28 4 46 2.2 3.6 0.89 Disease Animal 1175_4 4.782688269 62.74014605 448 7 4 156.8962253 0 3986.676375 0 420.5953027 10.39673782 135.1575917 810.94555 1568.962253 4 7 0 E.run2.Fa.na.1175.784.S Feces Run2 1175 784 3 M 42 6 46 3.6 3.6 0.89 Disease Animal 1175_6 4.794262153 105.2072228 518 7 4 16.39231778 0 5274.813687 12.87967826 739.99606 23.41759683 84.30334861 131.1385423 936.7038734 6 7 0 E.run2.Fa.na.1176.1.S Feces Run2 1176 1 1 M 7 1 NA 0.88 NA 0.92 Survived Animal 1176_1 2.965461217 90.8930848 169 NA 6 59.90194156 4.06114858 1019.348293 105.5898631 153.3083589 0 2.03057429 5.076435725 1770.660781 1 NA 1 E.run2.Fa.na.1176.627.S Feces Run2 1176 627 1 M 28 4 NA 1.8 NA 0.92 Survived Animal 1176_4 4.373821901 74.53680562 264 NA 6 0 19.44688531 990.5757204 4.861721327 382.8605544 8.508012322 491.033854 0 1300.510455 4 NA 1 E.run2.Fa.na.1177.374.S Feces Run2 1177 374 4 F 14 2 28 1.81 3.09 0.773 Disease Animal 1177_2 4.693193477 52.68076684 462 4 3 1.448691897 0 5616.578485 92.7162814 200.6438277 13.03822707 2.897383794 73.1589408 1723.219011 2 4 0 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1546.155674 7.136103111 227.165949 0 5.946752592 0 2295.446501 1 12 1 E.run2.Fa.na.1213.328.S Feces Run2 1213 328 3 F 14 2 84 1.39 18 0.916 Control Animal 1213_2 4.557718255 62.18708365 400 12 6 11.90229116 7.574185283 2523.285726 182.8624733 288.9010672 19.47647644 11.90229116 483.6658316 3840.111939 2 12 1 E.run2.Fa.na.1213.521.S Feces Run2 1213 521 3 F 28 4 84 2.7 18 0.916 Control Animal 1213_4 4.755649259 50.31975714 407 12 6 0 0 3786.50532 0 257.5996428 14.66014228 298.4386107 271.2126321 730.9128079 4 12 1 E.run2.Fa.na.1215.169.S Feces Run2 1215 169 3 F 7 1 34 0.81 1.6 0.897 Disease Animal 1215_1 2.059584381 80.71345809 162 5 3 11.18982481 8.951859845 1444.606383 0 208.1307414 0 10.07084233 0 1221.928869 1 5 0 E.run2.Fa.na.1217.387.S Feces Run2 1217 387 4 M 14 2 28 1.72 2.7 0.864 Disease Animal 1217_2 4.121579692 48.84669117 370 4 2 3.321495446 0 5989.486662 15.77710337 371.1771161 1.660747723 0 170.2266416 1010.564989 2 4 0 E.run2.Fa.na.1218.251.S Feces Run2 1218 251 1 M 14 2 NA 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NA 1 E.run2.Fa.na.1231.496.S Feces Run2 1231 496 3 F 28 4 NA 3.9 NA 0.727 Survived Animal 1231_4 4.627136261 66.2380176 428 NA 3 0 0 3248.502847 17.69337062 420.2175524 4.423342656 513.9924166 411.370867 1027.100165 4 NA 1 E.run2.Fa.na.1232.199.S Feces Run2 1232 199 4 F 7 1 84 0.93 11 0.875 Control Animal 1232_1 2.904691438 108.0601001 207 12 6 0 20.50159846 1878.458958 20.50159846 242.1751318 0 5.125399614 0 1408.203544 1 12 1 E.run2.Fa.na.1232.371.S Feces Run2 1232 371 4 F 14 2 84 1.43 11 0.875 Control Animal 1232_2 3.950801698 28.18889773 155 12 6 7.875910615 0 991.4381598 16.21511009 106.0931489 0 0 3.706310878 365.9981992 2 12 1 E.run2.Fa.na.1232.451.S Feces Run2 1232 451 4 F 28 4 84 2.6 11 0.875 Control Animal 1232_4 4.494550441 71.5932704 345 12 6 7.310067444 0 1427.899841 13.40179031 110.8693562 0 215.0378173 258.8982219 1494.29962 4 12 1 E.run2.Fa.na.1232.766.S Feces Run2 1232 766 4 F 42 6 84 3.6 11 0.875 Control Animal 1232_6 4.225419172 58.79619477 212 12 6 0 0 837.2735641 0 58.56276313 4.638634704 53.92412844 10.43692808 335.1413573 6 12 1 E.run2.Fa.na.1234.58.S Feces Run2 1234 58 1 M 7 1 NA 1 NA 0.92 Survived Animal 1234_1 3.651269156 76.64884088 244 NA 6 40.78016864 1.664496679 1789.33393 0 255.5002402 0 8.322483395 0 2136.381488 1 NA 1 E.run2.Fa.na.1238.399.S Feces Run2 1238 399 4 F 14 2 28 1.46 2.11 0.857 Disease Animal 1238_2 4.001526423 59.95755091 325 4 1 0 0 2194.754197 47.65111283 1395.897305 1.868671091 0 279.3663282 1148.298386 2 4 0 E.run2.Fa.na.1239.423.S Feces Run2 1239 423 2 M 14 2 22 0.83 0.55 0.849 Disease Animal 1239_2 2.937036636 52.0226311 216 3 2 6548.996082 8.088175969 1020.727807 30.73506868 154.484161 1.617635194 4.852905581 146.395985 5355.990127 2 3 0 E.run2.Fa.na.1245.107.S Feces Run2 1245 107 2 M 7 1 25 0.8 0.55 0.887 Disease Animal 1245_1 2.331304229 107.6406538 149 4 2 132.5006139 41.49009122 695.9628203 6.691950196 117.7783235 4.015170118 0 0 1019.85321 1 4 0 E.run3.Fa.na.1019.585.S Feces Run3 1019 585 1 F 28 4 NA 2.2 NA 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8.326326332 9.367117124 1748.52853 2 5 0 E.run3.Fa.na.1022.556.S Feces Run3 1022 556 2 M 28 4 46 2.7 5.2 0.784 Disease Animal 1022_4 4.63356499 72.47290823 418 7 4 3.810978738 0 3797.640313 1.905489369 1267.150431 200.0763838 697.4091091 1.905489369 1736.85356 4 7 0 E.run3.Fa.na.1022.61.S Feces Run3 1022 61 2 M 7 1 46 1.16 5.2 0.784 Disease Animal 1022_1 4.108122605 100.7048735 330 7 4 278.2947936 2.492192182 2606.833022 20.76826818 90.54964928 0 14.12242236 0 2084.303395 1 7 0 E.run3.Fa.na.1022.687.S Feces Run3 1022 687 2 M 42 6 46 5.5 5.2 0.784 Disease Animal 1022_6 4.234564955 34.35011045 454 7 4 3.67126775 4.895023667 3692.071601 25.69887425 4542.581963 239.8561597 457.6847129 70.97784317 1190.714507 6 7 0 E.run3.Fa.na.1023.126.S Feces Run3 1023 126 3 M 7 1 69 0.99 9.7 0.837 Disease Animal 1023_1 3.272560198 66.45711909 229 10 5 67.88227973 8.8542104 1367.483606 39.35204622 321.7029779 23.61122774 46.23865431 0 1871.189798 1 10 0 E.run3.Fa.na.1023.350.S Feces Run3 1023 350 3 M 14 2 69 1.34 9.7 0.837 Disease Animal 1023_2 4.351706507 95.41390141 378 10 5 160.3814638 44.95541031 3713.073889 9.720088715 179.8216412 95.98587607 0 85.05077626 1666.995215 2 10 0 E.run3.Fa.na.1023.488.S Feces Run3 1023 488 3 M 28 4 69 3.3 9.7 0.837 Disease Animal 1023_4 4.238929187 65.04173464 409 10 5 1.866706339 0 3106.199347 0 1214.292473 29.86730142 777.48319 211.8711694 1674.435586 4 10 0 E.run3.Fa.na.1023.712.S Feces Run3 1023 712 3 M 42 6 69 6 9.7 0.837 Disease Animal 1023_6 3.687004257 85.63939981 517 10 5 11.7998983 9.833248581 6543.043606 0 12238.46118 13.76654801 1314.705335 32.44972031 855.4926265 6 10 0 E.run3.Fa.na.1024.382.S Feces Run3 1024 382 4 M 14 2 76 1.84 10.1 1.01 Disease Animal 1024_2 4.415427072 54.87677241 411 11 5 1525.861903 17.43842175 3461.526718 83.31690393 450.4925619 139.507374 1.937602417 183.1034284 1544.269126 2 11 0 E.run3.Fa.na.1024.464.S Feces Run3 1024 464 4 M 28 4 76 2.4 10.1 1.01 Disease Animal 1024_4 4.806780869 56.86114309 487 11 5 212.9576165 3.889636831 4330.138202 0 520.2389261 29.17227623 468.7012382 142.9441535 3293.549987 4 11 0 E.run3.Fa.na.1025.302.S Feces Run3 1025 302 2 M 14 2 48 1.14 2.2 0.896 Disease Animal 1025_2 4.057775223 52.16443468 298 7 4 5.870060087 0 2607.774193 29.35030043 243.6074936 61.63563091 0 211.3221631 437.3194765 2 7 0 E.run3.Fa.na.1028.99.rep1 Feces Run3 1028 99 2 M 7 1 22 0.82 0.91 0.71 Disease Animal 1028_1 NA NA NA 3 2 NA NA NA NA NA NA NA NA NA 1 3 0 E.run3.Fa.na.1033.305.S Feces Run3 1033 305 2 F 14 2 84 1.82 22 0.896 Control Animal 1033_2 4.295557892 57.38249375 384 12 6 140.8277743 6.485489608 2816.555487 65.78139459 264.0520769 0 5.558991093 226.9921362 2249.538395 2 12 1 E.run3.Fa.na.1033.684.S Feces Run3 1033 684 2 F 42 6 84 5.9 22 0.896 Control Animal 1033_6 4.725421835 74.74392678 475 12 6 10.19825655 0 5125.087474 8.344028087 1423.120346 1.854228464 130.7231067 240.1225861 918.7702037 6 12 1 E.run3.Fa.na.1034.176.S Feces Run3 1034 176 4 F 7 1 57 1 8.8 0.817 Control Animal 1034_1 3.894593707 52.33091174 241 8 5 207.8531392 0 1881.503937 17.32109493 139.2904717 0 0 0 1866.347979 1 8 1 E.run3.Fa.na.1034.475.S Feces Run3 1034 475 4 F 28 4 57 3.6 8.8 0.817 Control Animal 1034_4 4.526573574 37.05215213 364 8 5 10.06774049 0 4843.589947 0 317.1338253 16.10838478 21.14225502 586.9492703 1539.35752 4 8 1 E.run3.Fa.na.1034.763.S Feces Run3 1034 763 4 F 42 6 57 4.4 8.8 0.817 Control Animal 1034_6 4.053496204 153.8380966 412 8 5 26.25002842 0 2369.661657 22.67047909 128.8637759 235.0570727 19.09092976 91.87509947 1406.762887 6 8 1 E.run3.Fa.na.1035.97.S Feces Run3 1035 97 2 M 7 1 NA 1.02 NA 0.768 Survived Animal 1035_1 2.881129947 50.59842301 164 NA 6 117.8470353 0 2075.286292 47.13881413 646.9802239 0 0 0 2927.320357 1 NA 1 E.run3.Fa.na.1039.50.S Feces Run3 1039 50 1 M 7 1 23 0.8 1.17 0.705 Disease Animal 1039_1 2.419717675 77.16178317 190 4 2 10243.16793 13.76433511 1501.56383 45.04691491 246.5067288 0 26.27736703 0 2900.520799 1 4 0 E.run3.Fa.na.1042.367.S Feces Run3 1042 367 2 M 14 2 NA 1.39 NA 0.873 Survived Animal 1042_2 3.282955067 47.37918695 344 NA 6 2.023512359 0 2780.305981 3.035268538 139.6223527 0 0 129.504791 1614.762862 2 NA 1 E.run3.Fa.na.1042.571.S Feces Run3 1042 571 2 M 28 4 NA 2 NA 0.873 Survived Animal 1042_4 4.20680598 24.96770588 365 NA 6 0 0 4380.461109 0 424.5215311 2.504551806 35.06372529 26.29779397 2641.04988 4 NA 1 E.run3.Fa.na.1042.685.S Feces Run3 1042 685 2 M 42 6 NA 4.1 NA 0.873 Survived Animal 1042_6 4.60773153 92.90299638 512 NA 6 2.992388667 0 4251.186833 13.96448045 2957.477466 3.989851556 504.7162218 156.6016736 928.6379496 6 NA 1 E.run3.Fa.na.1045.6.S Feces Run3 1045 6 1 M 7 1 22 1.06 1.9 0.731 Disease Animal 1045_1 2.699307526 101.4737845 284 3 2 11355.15798 0 2448.13039 31.25272838 532.5985795 0 59.90106272 0 1912.927417 1 3 0 E.run3.Fa.na.1047.51.S Feces Run3 1047 51 1 F 7 1 9 0.69 0.61 0.772 Disease Animal 1047_1 1.81833215 63.59793996 143 2 1 611.462722 184.8206533 526.8252266 8.636479124 511.2795641 0 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1154 758 4 M 42 6 NA 4.2 NA 0.813 Survived Animal 1154_6 4.669514096 143.0710489 513 NA 5 0 5.570169259 5760.483376 0 864.3045967 247.872532 439.1150099 6.498530802 895.8688892 6 NA 1 E.run3.Fa.na.1155.272.S Feces Run3 1155 272 1 F 14 2 22 2.2 2.07 1.062 Disease Animal 1155_2 3.859097554 52.43463886 311 3 2 7.509539786 0 2599.552356 16.27066954 140.178076 2.503179929 2.503179929 345.4388301 2852.373528 2 3 0 E.run3.Fa.na.1155.4.S Feces Run3 1155 4 1 F 7 1 22 1.27 2.07 1.062 Disease Animal 1155_1 3.57558058 62.18724569 197 3 2 28.59028071 8.797009449 1238.17908 71.10915971 475.0385103 0 38.8534584 0 2611.978722 1 3 0 E.run3.Fa.na.1156.384.S Feces Run3 1156 384 4 M 14 2 NA 1.76 NA 0.778 Survived Animal 1156_2 3.978694959 68.90698832 424 NA 6 452.3533048 10.84071101 4366.835498 32.52213303 176.4079337 26.60901793 6.898634278 184.2920872 1311.726032 2 NA 1 E.run3.Fa.na.1156.753.S Feces Run3 1156 753 4 M 42 6 NA 5.5 NA 0.778 Survived Animal 1156_6 3.074869027 44.4712788 369 NA 6 0 80.46141003 3103.859847 0 10789.14362 81.6805223 2656.445643 10.97201046 368.1719065 6 NA 1 E.run3.Fa.na.1157.238.S Feces Run3 1157 238 1 F 14 2 NA 1.47 NA 0.819 Survived Animal 1157_2 4.358160193 49.42975384 447 NA 6 164.5635324 8.009729452 4917.245726 29.12628892 728.8853802 6.553415006 4.368943337 64.07783562 3288.358019 2 NA 1 E.run3.Fa.na.1157.30.S Feces Run3 1157 30 1 F 7 1 NA 0.92 NA 0.819 Survived Animal 1157_1 3.227068292 65.42967141 204 NA 6 271.4988094 0 1251.470789 106.0232577 120.8863312 0 1.981743134 0 1847.975473 1 NA 1 E.run3.Fa.na.1158.395.S Feces Run3 1158 395 4 M 14 2 57 1.67 5.2 0.729 Control Animal 1158_2 4.105299797 54.70889013 338 8 5 2.975666439 0 3520.213398 2.975666439 110.0996583 1.983777626 0 34.71610846 765.7381638 2 8 1 E.run3.Fa.na.1158.752.S Feces Run3 1158 752 4 M 42 6 57 3.3 5.2 0.729 Control Animal 1158_6 4.66006318 79.08616309 440 8 5 8.308701453 0 4278.981248 4.747829402 362.0219919 219.5871099 51.03916607 66.46961162 932.9484774 6 8 1 E.run3.Fa.na.1159.334.S Feces Run3 1159 334 3 F 14 2 NA 1.14 NA 0.865 Survived Animal 1159_2 4.094448175 60.74480144 320 NA 6 17.69298209 0 3425.557922 118.9361574 402.0238709 23.59064279 0 734.2587568 722.4634354 2 NA 1 E.run3.Fa.na.1159.714.S Feces Run3 1159 714 3 F 42 6 NA 4 NA 0.865 Survived Animal 1159_6 4.172508235 77.67006858 472 NA 6 0 3.925145457 4462.890384 2.616763638 3781.223457 9.158672732 694.7507458 15.70058183 902.783455 6 NA 1 E.run3.Fa.na.1160.525.S Feces Run3 1160 525 3 F 28 4 47 2.2 2 1.035 Disease Animal 1160_4 4.554968828 54.42155352 476 7 4 506.089018 0 3176.110246 13.0538834 188.7792369 39.16165021 142.5885725 621.5656789 2785.497888 4 7 0 E.run3.Fa.na.1160.711.S Feces Run3 1160 711 3 F 42 6 47 2.5 2 1.035 Disease Animal 1160_6 4.614589451 178.8372908 577 7 4 36.25275703 0 3426.951797 3.198772679 746.3802919 154.6073461 207.9202241 24.52392387 2635.788688 6 7 0 E.run3.Fa.na.1163.160.S Feces Run3 1163 160 3 F 7 1 35 0.88 1.3 0.73 Disease Animal 1163_1 3.644725236 69.01375856 272 5 3 105.9923678 1.029052115 3303.257289 10.29052115 200.6651624 0 7.203364805 0 3196.235869 1 5 0 E.run3.Fa.na.1163.510.S Feces Run3 1163 510 3 F 28 4 35 2.4 1.3 0.73 Disease Animal 1163_4 4.541954547 138.7341305 587 5 3 88.79596375 25.04501542 5097.799047 7.968868542 445.1182286 54.64367 406.4122956 28.4602448 1580.112791 4 5 0 E.run3.Fa.na.1164.605.S Feces Run3 1164 605 1 F 28 4 NA 2.6 NA 1.058 Survived Animal 1164_4 4.083264488 89.78146112 454 NA 6 0 0 4041.86529 11.27009333 524.5716167 3.073661817 202.8616799 0 2351.35129 4 NA 1 E.run3.Fa.na.1168.12.S Feces Run3 1168 12 1 F 7 1 38 0.92 2.4 0.815 Disease Animal 1168_1 3.453005445 71.30334853 280 6 2 2250.564612 9.645276908 2606.36816 52.51317428 348.3016662 0 42.86789737 90.02258448 2190.549556 1 6 0 E.run3.Fa.na.1168.259.S Feces Run3 1168 259 1 F 14 2 38 1.3 2.4 0.815 Disease Animal 1168_2 3.770795168 76.70838754 364 6 2 44.45565304 32.44061168 4601.760841 18.02256204 79.29927299 26.43309099 0 246.3083479 1183.481574 2 6 0 E.run3.Fa.na.1174.268.S Feces Run3 1174 268 1 F 14 2 57 1.5 7.6 0.876 Control Animal 1174_2 4.451177099 41.730921 369 8 5 356.7458097 9.513221592 3664.492957 20.9290875 146.5036125 0 1.902644318 211.1935194 2146.182791 2 8 1 E.run3.Fa.na.1174.57.S Feces Run3 1174 57 1 F 7 1 57 0.93 7.6 0.876 Control Animal 1174_1 2.952508398 140.6756393 242 8 5 38.40052739 2.351052697 1850.278473 28.9963166 612.8410697 0 9.404210789 0 2079.897953 1 8 1 E.run3.Fa.na.1174.589.S Feces Run3 1174 589 1 F 28 4 57 2.4 7.6 0.876 Control Animal 1174_4 4.470454871 84.11820819 415 8 5 2.854087494 7.610899985 4366.753866 46.61676241 350.1013993 27.58951245 139.8502872 11.41634998 2674.279982 4 8 1 E.run3.Fa.na.1174.644.S Feces Run3 1174 644 1 F 42 6 57 3.6 7.6 0.876 Control Animal 1174_6 4.174637139 57.74059817 430 8 5 0 12.30773605 2913.576787 0 3816.517059 6.71331057 726.1564267 8.95108076 1087.556312 6 8 1 E.run3.Fa.na.1176.277.S Feces Run3 1176 277 1 M 14 2 NA 1.47 NA 0.92 Survived Animal 1176_2 4.33072438 41.35071976 372 NA 6 270.1624131 5.049764731 4224.969825 11.78278437 180.1082754 0 0 259.2212562 2619.144641 2 NA 1 E.run3.Fa.na.1176.656.S Feces Run3 1176 656 1 M 42 6 NA 2.6 NA 0.92 Survived Animal 1176_6 4.857924616 118.5841255 559 NA 6 0 8.96267818 3534.282762 18.92120949 930.1268245 83.65166301 664.2340384 207.1374512 1082.492354 6 NA 1 E.run3.Fa.na.1177.192.S Feces Run3 1177 192 4 F 7 1 28 1.03 3.09 0.773 Disease Animal 1177_1 3.010844833 95.00558716 208 4 3 254.4926696 15.39635368 1692.693237 115.0198187 334.1914416 0 24.45303232 0 2209.829587 1 4 0 E.run3.Fa.na.1182.415.S Feces Run3 1182 415 3 F 14 2 NA 1.66 NA 0.793 Survived Animal 1182_2 4.150993984 65.80071028 342 NA 6 8.437578327 0 3182.021727 86.48517785 272.111901 9.492275618 0 5.273486454 1396.419213 2 NA 1 E.run3.Fa.na.1182.537.S Feces Run3 1182 537 3 F 28 4 NA 3.5 NA 0.793 Survived Animal 1182_4 4.717327043 46.68330596 520 NA 6 138.5359806 0 4758.128305 19.42093186 1413.843839 10.35783032 899.8365094 334.0400279 2566.152463 4 NA 1 E.run3.Fa.na.1184.450.S Feces Run3 1184 450 4 F 28 4 NA 3.1 NA 0.947 Survived Animal 1184_4 4.563036677 63.23344866 426 NA 6 24.91671622 1.845682682 4267.218361 71.05878327 441.1181611 4.614206706 62.7532112 1578.058693 1957.346485 4 NA 1 E.run3.Fa.na.1184.759.S Feces Run3 1184 759 4 F 42 6 NA 4 NA 0.947 Survived Animal 1184_6 4.613354487 89.89333244 456 NA 6 16.13345612 2.482070172 3338.384382 3.723105258 1322.943402 103.0059122 451.7367713 12.41035086 851.350069 6 NA 1 E.run3.Fa.na.1186.261.S Feces Run3 1186 261 1 F 14 2 26 0.9 0.95 1.054 Disease Animal 1186_2 4.223947804 34.32711295 333 4 2 26.50718363 30.58521188 4555.157557 18.35112713 294.6375411 0 28.54619776 30.58521188 5119.964469 2 4 0 E.run3.Fa.na.1186.34.S Feces Run3 1186 34 1 F 7 1 26 0.96 0.95 1.054 Disease Animal 1186_1 2.740711763 114.6100927 191 4 2 107.025877 17.83764617 1250.617193 13.8737248 94.14313257 0 0 0 1458.723065 1 4 0 E.run3.Fa.na.1187.48.S Feces Run3 1187 48 1 F 7 1 27 0.76 0.63 0.771 Disease Animal 1187_1 2.950342014 51.49143424 182 4 2 373.2461395 7.197583958 711.5325855 696.1091913 484.2945777 0 0 0 3396.231401 1 4 0 E.run3.Fa.na.1188.244.S Feces Run3 1188 244 1 M 14 2 36 1.56 1.5 0.883 Disease Animal 1188_2 3.979248172 68.36362618 302 5 3 18.08097114 1.205398076 2722.994254 0 48.21592304 3.616194228 0 3825.933493 2060.025312 2 5 0 E.run3.Fa.na.1188.8.S Feces Run3 1188 8 1 M 7 1 36 1.04 1.5 0.883 Disease Animal 1188_1 3.18565204 88.64157887 183 5 3 24.61667542 0 1250.267988 14.25175945 181.3860294 0 0 0 1580.649684 1 5 0 E.run3.Fa.na.1190.360.S Feces Run3 1190 360 3 F 14 2 57 0.97 5.9 0.756 Control Animal 1190_2 4.159550859 49.0183857 310 8 5 107.0105974 0.9817486 2877.505148 6.872240202 647.9540762 374.0462167 10.7992346 138.4265526 1721.005296 2 8 1 E.run3.Fa.na.1191.325.S Feces Run3 1191 325 2 M 14 2 84 1.68 18 0.906 Control Animal 1191_2 3.94181319 70.59029275 315 12 6 3.187449015 7.437381035 2865.516665 75.43629336 422.8682361 0 2.12496601 2833.642174 649.1771161 2 12 1 E.run3.Fa.na.1191.578.S Feces Run3 1191 578 2 M 28 4 84 2 18 0.906 Control Animal 1191_4 3.933637732 58.17445037 400 12 6 1048.347527 12.09631762 2581.891794 69.88983513 829.2697744 33.60088228 458.3160342 38.97702344 1514.727773 4 12 1 E.run3.Fa.na.1192.221.S Feces Run3 1192 221 4 F 7 1 51 0.89 4.2 0.811 Disease Animal 1192_1 2.355343539 80.12952659 235 8 4 0 43.34529691 1865.122629 283.0192916 781.4902062 0 31.87154185 2.549723348 2009.181998 1 8 0 E.run3.Fa.na.1192.434.S Feces Run3 1192 434 4 F 14 2 51 1.53 4.2 0.811 Disease Animal 1192_2 3.746960584 61.60034792 320 8 4 0 0 4548.463719 91.85462012 154.9355038 0 0 8.853457361 558.8744959 2 8 0 E.run3.Fa.na.1192.457.S Feces Run3 1192 457 4 F 28 4 51 3 4.2 0.811 Disease Animal 1192_4 4.591419319 89.50268798 490 8 4 16.09919693 0 6685.459847 0 725.5371419 2.146559591 54.73726957 11.80607775 2016.692736 4 8 0 E.run3.Fa.na.1194.225.S Feces Run3 1194 225 4 M 7 1 31 0.79 0.59 0.764 Disease Animal 1194_1 2.264945301 72.13483459 123 5 3 5.153042903 40.36550274 1239.306818 122.8141892 201.8275137 0 66.98955774 0 2893.43359 1 5 0 E.run3.Fa.na.1195.220.S Feces Run3 1195 220 4 M 7 1 35 1.24 1.8 1.143 Disease Animal 1195_1 2.640032946 71.37945613 190 5 3 0 3.286645071 1738.635242 133.6568995 679.2399813 0 49.29967606 0 1756.164016 1 5 0 E.run3.Fa.na.1195.400.S Feces Run3 1195 400 4 M 14 2 35 1.96 1.8 1.143 Disease Animal 1195_2 3.724362383 59.97805736 284 5 3 24.50030649 0 2325.195754 176.1688705 236.8362961 0 4.666725046 14.00017514 616.007706 2 5 0 E.run3.Fa.na.1195.443.S Feces Run3 1195 443 4 M 28 4 35 3.2 1.8 1.143 Disease Animal 1195_4 4.438484711 90.28588773 455 5 3 0 0 8663.922241 0 362.0921985 0 227.0545139 38.24076024 2578.861268 4 5 0 E.run3.Fa.na.1196.751.S Feces Run3 1196 751 4 M 42 6 NA 4.8 NA 0.943 Survived Animal 1196_6 5.023259581 125.3979379 606 NA 6 24.41348948 9.765395789 5212.768272 19.53079157 376.9442774 140.6216993 202.1436929 398.4281482 2266.548363 6 NA 1 E.run3.Fa.na.1198.745.S Feces Run3 1198 745 4 M 42 6 55 5.8 7.3 1.007 Disease Animal 1198_6 4.270351277 59.2957651 411 8 4 8.451547197 1.4085912 6873.925053 5.634364798 453.5663663 21.12886799 98.60138396 0 445.1148191 6 8 0 E.run3.Fa.na.1199.287.S Feces Run3 1199 287 2 M 14 2 NA 1.59 NA 0.883 Survived Animal 1199_2 4.543669936 50.80656899 435 NA 6 792.7697756 0.914382671 4597.516069 7.315061367 199.3354222 52.11981224 4.571913355 181.0477688 2296.929269 2 NA 1 E.run3.Fa.na.1199.561.S Feces Run3 1199 561 2 M 28 4 NA 2.8 NA 0.883 Survived Animal 1199_4 4.420477764 88.2069549 540 NA 6 10.12258363 7.007942516 4399.43058 0 3019.644564 9.343923354 3269.594514 27.25310978 1644.53051 4 NA 1 E.run3.Fa.na.1199.700.S Feces Run3 1199 700 2 M 42 6 NA 5.8 NA 0.883 Survived Animal 1199_6 4.482322615 51.59254191 215 NA 6 3.810678864 5.716018295 708.7862687 7.621357727 617.3299759 7.621357727 241.9781078 116.2257053 163.8591911 6 NA 1 E.run3.Fa.na.1199.82.S Feces Run3 1199 82 2 M 7 1 NA 0.99 NA 0.883 Survived Animal 1199_1 4.009983616 42.80591274 269 NA 6 343.7513776 1.994688845 2188.838559 51.86190997 716.0932953 0 110.3727827 0 3774.616191 1 NA 1 E.run3.Fa.na.1203.122.S Feces Run3 1203 122 3 M 7 1 46 1.11 3.2 0.757 Disease Animal 1203_1 2.88021553 68.05933417 287 7 4 271.201207 0 3299.250167 20.77751182 217.6170975 0 3.280659761 0 1431.461209 1 7 0 E.run3.Fa.na.1203.347.S Feces Run3 1203 347 3 M 14 2 46 1.97 3.2 0.757 Disease Animal 1203_2 3.935775706 88.29945068 415 7 4 60.40081198 0 2763.337148 67.44757338 72.48097437 0 10.066802 0 2218.72316 2 7 0 E.run3.Fa.na.1203.514.S Feces Run3 1203 514 3 M 28 4 46 2.9 3.2 0.757 Disease Animal 1203_4 4.620448746 54.65551607 497 7 4 70.02055231 1.89244736 2592.652883 5.677342079 104.0846048 5.677342079 462.7033794 74.75167071 2094.939227 4 7 0 E.run3.Fa.na.1203.740.S Feces Run3 1203 740 3 M 42 6 46 4.4 3.2 0.757 Disease Animal 1203_6 3.976822185 122.9388209 418 7 4 29.81477515 2.484564596 8636.346536 0 438.5256512 11.18054068 288.2094931 0 556.5424695 6 7 0 E.run3.Fa.na.1204.614.S Feces Run3 1204 614 2 M 28 4 72 2.6 8.9 1.028 Disease Animal 1204_4 4.38620232 38.95982184 221 11 5 0 0 1151.581017 0 258.804793 0 385.1978315 6.018716116 854.6576885 4 11 0 E.run3.Fa.na.1204.676.S Feces Run3 1204 676 2 M 42 6 72 4.8 8.9 1.028 Disease Animal 1204_6 4.144061136 89.53694917 570 11 5 6.203051494 13.64671329 3592.807425 3.721830896 6108.765112 4.342136046 3345.925976 32.87617292 2646.842072 6 11 0 E.run3.Fa.na.1204.70.S Feces Run3 1204 70 2 M 7 1 72 1.03 8.9 1.028 Disease Animal 1204_1 3.028402616 55.55239618 152 11 5 96.90301953 0 795.624792 3.825119192 90.52782087 0 5.100158923 0 1772.305226 1 11 0 E.run3.Fa.na.1206.245.S Feces Run3 1206 245 1 M 14 2 43 1.2 2.2 0.909 Disease Animal 1206_2 4.00410567 78.51152963 293 6 4 95.8956846 22.0300897 4102.780235 5.183550519 130.8846506 10.36710104 2.591775259 445.7853446 1569.31992 2 6 0 E.run3.Fa.na.1206.47.S Feces Run3 1206 47 1 M 7 1 43 0.8 2.2 0.909 Disease Animal 1206_1 2.222224318 117.7060378 161 6 4 175.9644202 14.912239 1060.260193 20.8771346 110.3505686 0 0 4.473671701 1550.872856 1 6 0 E.run3.Fa.na.1208.256.S Feces Run3 1208 256 1 F 14 2 NA 1.4 NA 0.781 Survived Animal 1208_2 4.406914958 69.44381776 414 NA 6 34.78617461 11.34331781 3755.394415 43.10460766 368.2797181 2.268663561 3.024884748 70.3285704 1699.229007 2 NA 1 E.run3.Fa.na.1208.37.S Feces Run3 1208 37 1 F 7 1 NA 1.05 NA 0.781 Survived Animal 1208_1 3.589173886 79.49673583 227 NA 6 163.8075183 0 2103.288535 42.58995477 434.9089612 0 3.276150367 0 2140.964265 1 NA 1 E.run3.Fa.na.1208.625.S Feces Run3 1208 625 1 F 28 4 NA 2.2 NA 0.781 Survived Animal 1208_4 4.508520524 36.03949529 401 NA 6 0 18.34607154 2282.047454 5.096130983 1589.992867 89.69190531 732.8236354 7.134583376 2815.102755 4 NA 1 E.run3.Fa.na.1210.44.S Feces Run3 1210 44 1 F 7 1 24 0.99 1.4 0.934 Disease Animal 1210_1 3.495815072 71.53907916 193 4 2 1.89006652 2.835099781 1191.686941 8.505299342 202.2371176 0 1.89006652 0 2940.943506 1 4 0 E.run3.Fa.na.1213.775.S Feces Run3 1213 775 3 F 42 6 84 4.8 18 0.916 Control Animal 1213_6 4.243042942 223.2401744 437 12 6 47.77101842 0 2928.960566 2.239266488 1572.711497 2.239266488 558.3237777 125.3989233 883.7638406 6 12 1 E.run3.Fa.na.1215.327.S Feces Run3 1215 327 3 F 14 2 34 0.95 1.6 0.897 Disease Animal 1215_2 3.82754437 43.98095215 307 5 3 7.870409244 0 3147.179897 126.9103491 183.9708161 6.886608089 0 183.9708161 2927.792239 2 5 0 E.run3.Fa.na.1215.491.S Feces Run3 1215 491 3 F 28 4 34 1.8 1.6 0.897 Disease Animal 1215_4 4.175358007 82.06986743 342 5 3 7.027716255 0 3407.036841 0 549.5674111 42.16629754 233.3201797 5.622173004 1214.389369 4 5 0 E.run3.Fa.na.1217.214.S Feces Run3 1217 214 4 M 7 1 28 0.99 2.7 0.864 Disease Animal 1217_1 4.178354976 44.68515887 308 4 2 0 0 2211.394545 2.24735218 966.3614374 20.22616962 531.4987906 89.8940872 1360.771745 1 4 0 E.run3.Fa.na.1218.42.S Feces Run3 1218 42 1 M 7 1 NA 0.79 NA 0.83 Survived Animal 1218_1 2.316622635 53.39073212 169 NA 5 78.7878433 0 914.3536552 9.330139338 175.1992831 0 140.9887722 0 1139.313681 1 NA 1 E.run3.Fa.na.1218.648.S Feces Run3 1218 648 1 M 42 6 NA 2.5 NA 0.83 Survived Animal 1218_6 4.737090063 73.14618649 616 NA 5 5.107177945 0 4032.968184 11.91674854 710.7489308 13.61914119 120.0186817 693.7250043 2156.931486 6 NA 1 E.run3.Fa.na.1223.253.S Feces Run3 1223 253 1 M 14 2 35 0.8 1.2 0.769 Disease Animal 1223_2 4.056870284 55.56938688 336 5 3 72.57688365 11.5814176 3381.001845 45.55357591 74.89316717 0 3.860472534 136.6607277 1718.682372 2 5 0 E.run3.Fa.na.1223.31.S Feces Run3 1223 31 1 M 7 1 35 0.81 1.2 0.769 Disease Animal 1223_1 3.195283841 57.04517157 203 5 3 326.2301311 85.20936261 1410.417831 27.59160313 2178.92513 0 1.623035478 0 2256.019315 1 5 0 E.run3.Fa.na.1223.594.S Feces Run3 1223 594 1 M 28 4 35 1.4 1.2 0.769 Disease Animal 1223_4 3.885629283 95.07779221 386 5 3 0 0 3393.556549 47.14996302 330.0497412 4.963154002 78.16967553 104.226234 822.6427759 4 5 0 E.run3.Fa.na.1225.304.S Feces Run3 1225 304 2 F 14 2 NA 1.55 NA 1.061 Survived Animal 1225_2 4.400680229 51.09532896 347 NA 5 142.2156148 0 3741.525512 75.29061958 94.11327448 17.77695185 0 29.2796854 2559.881066 2 NA 1 E.run3.Fa.na.1225.63.S Feces Run3 1225 63 2 F 7 1 NA 1.11 NA 1.061 Survived Animal 1225_1 4.196018872 47.62078188 255 NA 5 283.3209695 0 1566.919831 132.0949858 131.1839859 0 9.109999019 0 1206.16387 1 NA 1 E.run3.Fa.na.1225.682.S Feces Run3 1225 682 2 F 42 6 NA 3.5 NA 1.061 Survived Animal 1225_6 4.324410347 112.9464198 433 NA 5 14.02097554 0 2971.368278 4.31414632 2012.549258 53.926829 815.3736545 65.79073138 927.5414588 6 NA 1 E.run3.Fa.na.1229.16.S Feces Run3 1229 16 1 F 7 1 22 1.07 1.21 1.046 Disease Animal 1229_1 2.929263423 59.25526726 220 3 2 71.66547236 31.01938356 3004.60167 42.78535663 1365.922511 0 0 0 2360.682052 1 3 0 E.run3.Fa.na.1234.249.S Feces Run3 1234 249 1 M 14 2 NA 1.58 NA 0.92 Survived Animal 1234_2 4.018280109 61.33386437 387 NA 6 1346.809063 8.050950844 5910.548055 0 221.9762161 5.750679174 0 384.1453689 1785.010816 2 NA 1 E.run3.Fa.na.1234.579.S Feces Run3 1234 579 1 M 28 4 NA 2 NA 0.92 Survived Animal 1234_4 4.790050205 92.45470707 470 NA 6 26.06975938 36.73466094 2810.794057 8.294923438 539.1700235 87.68919064 433.7059969 23.69978125 3249.24001 4 NA 1 E.run3.Fa.na.1234.646.S Feces Run3 1234 646 1 M 42 6 NA 3.4 NA 0.92 Survived Animal 1234_6 4.001120004 62.52534507 419 NA 6 9.127525552 73.02020441 2313.175761 0 4987.540748 136.9128833 1649.474261 10.43145777 974.0373696 6 NA 1 E.run3.Fa.na.1239.80.S Feces Run3 1239 80 2 M 7 1 22 0.84 0.55 0.849 Disease Animal 1239_1 2.887731676 61.29312642 153 3 2 104.3518636 29.34896165 967.4287357 148.9188054 351.1005412 0 4.347994318 0 1215.264412 1 3 0 E.run3.Fa.na.1245.300.S Feces Run3 1245 300 2 M 14 2 25 0.72 0.55 0.887 Disease Animal 1245_2 3.887992 79.86166123 390 4 2 521.1559051 6.17971429 2775.721668 67.97685719 31.92852383 0 0 56.64738099 1423.394191 2 4 0