MUFFIN_pipeline="RVanDamme/MUFFIN" assembler='metaflye' ./nextflow run \ $MUFFIN_pipeline \ --output results_dir_all \ --assembler $assembler \ --illumina subset/subset_ill/ --ont subset/subset_ont/ \ --cpus 8 \ --memory 64g \ --modular full \ -profile slurm,conda $@