variant,DP_C1,DP_C10,DP_C7,DP_F5,DP_F7,DP_F8,DP_X1,DP_X2,DP_X3,DP_Z2,DP_Z6,DP_Z8,AC_C1,AC_C10,AC_C7,AC_F5,AC_F7,AC_F8,AC_X1,AC_X2,AC_X3,AC_Z2,AC_Z6,AC_Z8,AF_C1,AF_C10,AF_C7,AF_F5,AF_F7,AF_F8,AF_X1,AF_X2,AF_X3,AF_Z2,AF_Z6,AF_Z8,inRep,inAlu,chr,position,ntCh,afCut_C,afCut_F,afCut_Z,afCut_X,geneSymbol,SNP138,geneFunc,exonFunc,AAchange,Description,geneID,strand,AluName,AluStr,RepMaskNasme,RepMaskStr,Seq,SeqRC,ntCh_ori,seq_ori,seqR_ori,CDSStrand,AluStrand,RepStrand,ntCh_CDS,ntCh_Alu,ntCh_RepMask,ntCh_int,seq_int,distGene1,distGene2 chr1:100489619_A/G,186,176,187,214,176,168,311,325,487,260,398,366,61,49,42,63,46,66,0,0,0,0,0,0,0.327956989,0.278409091,0.22459893,0.294392523,0.261363636,0.392857143,0,0,0,0,0,0,0,0,chr1,100489619,A/G,3,3,0,0,SLC35A3,.,UTR3,.,.,NM_012243:c.*1587A>G\x3bNM_001271684:c.*1649A>G\x3bNM_001271685:c.*1587A>G,23443,+,,,,,ATTTTGCTTTAAAATAGTGGGTTTTTTTCCT,AGGAAAAAAACCCACTATTTTAAAGCAAAAT,A/G,ATTTTGCTTTAAAATAGTGGGTTTTTTTCCT,AGGAAAAAAACCCACTATTTTAAAGCAAAAT,+,,,A/G,,,A/G,ATTTTGCTTTAAAATAGTGGGTTTTTTTCCT,NA,NA chr1:149913513_T/C,56,60,59,82,65,52,87,82,78,71,89,70,4,10,7,6,7,8,0,0,0,0,0,0,0.071428571,0.166666667,0.118644068,0.073170732,0.107692308,0.153846154,0,0,0,0,0,0,1,0,chr1,149913513,T/C,3,3,0,0,OTUD7B,.,UTR3,.,.,NM_020205:c.*2243A>G,56957,-,,,,,AAATCACAATTAATGTAAAAAGTCTATGATG,CATCATAGACTTTTTACATTAATTGTGATTT,T/C,AAATCACAATTAATGTAAAAAGTCTATGATG,CATCATAGACTTTTTACATTAATTGTGATTT,-,,,A/G,,,A/G,CATCATAGACTTTTTACATTAATTGTGATTT,NA,NA chr1:160967938_T/C,55,81,51,78,67,88,112,113,63,119,83,96,19,15,17,8,5,24,0,0,0,0,0,0,0.345454545,0.185185185,0.333333333,0.102564103,0.074626866,0.272727273,0,0,0,0,0,0,1,1,chr1,160967938,T/C,3,3,0,0,F11R,.,UTR3,.,.,NM_016946:c.*723A>G\x3bNM_001348091:c.*723A>G,50848,-,AluSp,-,AluSp,-,CAGCCTCTGGGATTATAGGCGTGAGCCACTG,CAGTGGCTCACGCCTATAATCCCAGAGGCTG,T/C,CAGCCTCTGGGATTATAGGCGTGAGCCACTG,CAGTGGCTCACGCCTATAATCCCAGAGGCTG,-,-,-,A/G,A/G,A/G,A/G,CAGTGGCTCACGCCTATAATCCCAGAGGCTG,NA,NA chr1:179042905_A/G,217,248,245,310,208,226,319,339,345,258,284,293,91,96,87,133,73,97,0,0,0,0,0,0,0.419354839,0.387096774,0.355102041,0.429032258,0.350961538,0.42920354,0,0,0,0,0,0,0,0,chr1,179042905,A/G,3,3,0,0,FAM20B,.,UTR3,.,.,NM_001324310:c.*1626A>G\x3bNM_014864:c.*1626A>G\x3bNM_001324311:c.*1626A>G,9917,+,,,,,CTTCTTTCTCCTCTTAGCACTCTCAAATTTC,GAAATTTGAGAGTGCTAAGAGGAGAAAGAAG,A/G,CTTCTTTCTCCTCTTAGCACTCTCAAATTTC,GAAATTTGAGAGTGCTAAGAGGAGAAAGAAG,+,,,A/G,,,A/G,CTTCTTTCTCCTCTTAGCACTCTCAAATTTC,NA,NA chr1:19586437_A/G,112,104,76,122,121,88,151,188,202,256,305,315,22,10,8,16,10,19,0,0,0,0,0,0,0.196428571,0.096153846,0.105263158,0.131147541,0.082644628,0.215909091,0,0,0,0,0,0,1,1,chr1,19586437,A/G,3,3,0,0,MRTO4,.,UTR3,.,.,NM_016183:c.*1113A>G,51154,+,AluSz,-,AluSz,-,CTGTTTTAAAATTTTAAGGAGAGATGGGGTT,AACCCCATCTCTCCTTAAAATTTTAAAACAG,A/G,CTGTTTTAAAATTTTAAGGAGAGATGGGGTT,AACCCCATCTCTCCTTAAAATTTTAAAACAG,+,-,-,A/G,T/C,T/C,A/G,CTGTTTTAAAATTTTAAGGAGAGATGGGGTT,NA,NA chr1:204520000_A/G,98,82,92,88,87,71,122,118,114,102,107,100,15,14,9,8,8,9,0,0,0,0,0,0,0.153061224,0.170731707,0.097826087,0.090909091,0.091954023,0.126760563,0,0,0,0,0,0,1,0,chr1,204520000,A/G,3,3,0,0,MDM4,.,UTR3,.,.,NM_002393:c.*1190A>G\x3bNM_001278516:c.*2172A>G\x3bNM_001278517:c.*1190A>G\x3bNM_001278518:c.*1833A>G\x3bNM_001204172:c.*1190A>G\x3bNM_001204171:c.*1190A>G\x3bNM_001278519:c.*1190A>G,4194,+,,,,,TGGGACTATAGATTTAGCTGATTAAATTTAT,ATAAATTTAATCAGCTAAATCTATAGTCCCA,A/G,TGGGACTATAGATTTAGCTGATTAAATTTAT,ATAAATTTAATCAGCTAAATCTATAGTCCCA,+,,,A/G,,,A/G,TGGGACTATAGATTTAGCTGATTAAATTTAT,NA,NA chr1:24865333_A/G,89,81,95,93,84,75,171,100,107,116,70,110,26,16,21,15,20,21,0,0,0,0,0,0,0.292134831,0.197530864,0.221052632,0.161290323,0.238095238,0.28,0,0,0,0,0,0,1,0,chr1,24865333,A/G,3,3,0,0,LOC100506985,.,downstream,.,.,dist\x3d431,100506985,,,,,,GTGGTGTGTGCCTGTAGTCTCAGCTATTTGA,TCAAATAGCTGAGACTACAGGCACACACCAC,A/G,GTGGTGTGTGCCTGTAGTCTCAGCTATTTGA,TCAAATAGCTGAGACTACAGGCACACACCAC,,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+431,NA chr1:28824774_A/G,120,123,119,201,106,114,195,179,137,149,178,139,7,15,10,24,14,20,0,0,0,0,0,0,0.058333333,0.12195122,0.084033613,0.119402985,0.132075472,0.175438596,0,0,0,0,0,0,0,0,chr1,28824774,A/G,3,3,0,0,PHACTR4,.,UTR3,.,.,NM_001350159:c.*1713A>G\x3bNM_001350158:c.*1713A>G\x3bNM_001350160:c.*1713A>G\x3bNM_001350161:c.*1713A>G\x3bNM_001048183:c.*1713A>G\x3bNM_023923:c.*1713A>G,65979,+,,,,,TCTGGAGAAGCAAGAAGGGCACAATCATGGC,GCCATGATTGTGCCCTTCTTGCTTCTCCAGA,A/G,TCTGGAGAAGCAAGAAGGGCACAATCATGGC,GCCATGATTGTGCCCTTCTTGCTTCTCCAGA,+,,,A/G,,,A/G,TCTGGAGAAGCAAGAAGGGCACAATCATGGC,NA,NA chr1:28826250_A/G,73,74,78,105,72,62,146,123,108,102,128,124,6,12,6,18,7,10,0,0,0,0,0,0,0.082191781,0.162162162,0.076923077,0.171428571,0.097222222,0.161290323,0,0,0,0,0,0,1,1,chr1,28826250,A/G,3,3,0,0,PHACTR4,.,UTR3,.,.,NM_001350159:c.*3189A>G\x3bNM_001350158:c.*3189A>G\x3bNM_001350160:c.*3189A>G\x3bNM_001350161:c.*3189A>G\x3bNM_001048183:c.*3189A>G\x3bNM_023923:c.*3189A>G,65979,+,AluJb,-,AluJb,-,ATCTTCGCCTCCCAAAGTTCTGAGATAGCAG,CTGCTATCTCAGAACTTTGGGAGGCGAAGAT,A/G,ATCTTCGCCTCCCAAAGTTCTGAGATAGCAG,CTGCTATCTCAGAACTTTGGGAGGCGAAGAT,+,-,-,A/G,T/C,T/C,A/G,ATCTTCGCCTCCCAAAGTTCTGAGATAGCAG,NA,NA chr1:33148006_A/G,207,179,181,206,179,103,213,231,179,184,137,201,33,28,30,26,18,15,0,0,0,0,0,0,0.15942029,0.156424581,0.165745856,0.126213592,0.100558659,0.145631068,0,0,0,0,0,0,1,1,chr1,33148006,A/G,3,3,0,0,RBBP4,.,UTR3,.,.,NM_005610:c.*2700A>G\x3bNM_001135255:c.*2700A>G\x3bNM_001135256:c.*2700A>G,5928,+,AluSx,+,AluSx,+,CCTGGGCAAAATAGCAAGACCCGACCCCCCA,TGGGGGGTCGGGTCTTGCTATTTTGCCCAGG,A/G,CCTGGGCAAAATAGCAAGACCCGACCCCCCA,TGGGGGGTCGGGTCTTGCTATTTTGCCCAGG,+,+,+,A/G,A/G,A/G,A/G,CCTGGGCAAAATAGCAAGACCCGACCCCCCA,NA,NA chr1:53290266_A/G,104,100,123,147,123,106,186,149,156,138,130,169,6,6,9,8,4,23,0,0,0,0,0,0,0.057692308,0.06,0.073170732,0.054421769,0.032520325,0.216981132,0,0,0,0,0,0,1,1,chr1,53290266,A/G,3,3,0,0,ZYG11B,.,UTR3,.,.,NM_024646:c.*2965A>G,79699,+,AluSg4,+,AluSg4,+,TGGTGAGCCAATATCATGCCACTGCACTCCA,TGGAGTGCAGTGGCATGATATTGGCTCACCA,A/G,TGGTGAGCCAATATCATGCCACTGCACTCCA,TGGAGTGCAGTGGCATGATATTGGCTCACCA,+,+,+,A/G,A/G,A/G,A/G,TGGTGAGCCAATATCATGCCACTGCACTCCA,NA,NA chr1:53290298_A/G,124,137,154,168,142,120,220,182,180,170,151,215,26,17,28,27,14,30,0,0,0,0,0,0,0.209677419,0.124087591,0.181818182,0.160714286,0.098591549,0.25,0,0,0,0,0,0,1,1,chr1,53290298,A/G,3,3,0,0,ZYG11B,.,UTR3,.,.,NM_024646:c.*2997A>G,79699,+,AluSg4,+,AluSg4,+,CCTGGGTGACAGAGTAAGACTCCGTCTCAAA,TTTGAGACGGAGTCTTACTCTGTCACCCAGG,A/G,CCTGGGTGACAGAGTAAGACTCCGTCTCAAA,TTTGAGACGGAGTCTTACTCTGTCACCCAGG,+,+,+,A/G,A/G,A/G,A/G,CCTGGGTGACAGAGTAAGACTCCGTCTCAAA,NA,NA chr1:53291435_A/G,158,162,200,214,191,154,339,296,347,300,311,283,42,26,39,32,26,26,0,0,0,0,0,0,0.265822785,0.160493827,0.195,0.14953271,0.136125654,0.168831169,0,0,0,0,0,0,1,1,chr1,53291435,A/G,3,3,0,0,ZYG11B,.,UTR3,.,.,NM_024646:c.*4134A>G,79699,+,AluJr,-,AluJr,-,ACCTCAGCTTCCCAAAGTGCTGGAATCACAG,CTGTGATTCCAGCACTTTGGGAAGCTGAGGT,A/G,ACCTCAGCTTCCCAAAGTGCTGGAATCACAG,CTGTGATTCCAGCACTTTGGGAAGCTGAGGT,+,-,-,A/G,T/C,T/C,A/G,ACCTCAGCTTCCCAAAGTGCTGGAATCACAG,NA,NA chr1:6282587_T/C,74,69,65,88,66,57,102,101,61,90,104,89,25,14,10,20,9,21,0,0,0,0,0,0,0.337837838,0.202898551,0.153846154,0.227272727,0.136363636,0.368421053,0,0,0,0,0,0,0,0,chr1,6282587,T/C,3,3,0,0,ICMT,.,UTR3,.,.,NM_012405:c.*2553A>G,23463,-,,,,,TTCTCCCACCATCCCTACCCCTGGAATTCCT,AGGAATTCCAGGGGTAGGGATGGTGGGAGAA,T/C,TTCTCCCACCATCCCTACCCCTGGAATTCCT,AGGAATTCCAGGGGTAGGGATGGTGGGAGAA,-,,,A/G,,,A/G,AGGAATTCCAGGGGTAGGGATGGTGGGAGAA,NA,NA chr1:6582501_T/C,110,120,111,149,125,101,195,252,147,220,277,228,5,9,16,16,7,19,0,0,0,0,0,0,0.045454545,0.075,0.144144144,0.10738255,0.056,0.188118812,0,0,0,0,0,0,1,1,chr1,6582501,T/C,3,3,0,0,NOL9,.,UTR3,.,.,NM_024654:c.*3413A>G,79707,-,AluSx1,+,AluSx1,+,TGTAATCCCAGCTACTTGGGAGGCTGAAGCA,TGCTTCAGCCTCCCAAGTAGCTGGGATTACA,T/C,TGTAATCCCAGCTACTTGGGAGGCTGAAGCA,TGCTTCAGCCTCCCAAGTAGCTGGGATTACA,-,+,+,A/G,T/C,T/C,A/G,TGCTTCAGCCTCCCAAGTAGCTGGGATTACA,NA,NA chr1:67874696_T/C,67,70,50,84,66,53,52,76,52,69,65,83,35,36,19,40,29,25,0,0,0,0,0,0,0.52238806,0.514285714,0.38,0.476190476,0.439393939,0.471698113,0,0,0,0,0,0,1,1,chr1,67874696,T/C,3,3,0,0,SERBP1,.,UTR3,.,.,NM_015640:c.*4194A>G\x3bNM_001018068:c.*4194A>G\x3bNM_001018067:c.*4194A>G\x3bNM_001018069:c.*4194A>G,26135,-,AluSz6,-,AluSz6,-,TACAGTGCTATGATCTTGGCTCACTGCAACC,GGTTGCAGTGAGCCAAGATCATAGCACTGTA,T/C,TACAGTGCTATGATCTTGGCTCACTGCAACC,GGTTGCAGTGAGCCAAGATCATAGCACTGTA,-,-,-,A/G,A/G,A/G,A/G,GGTTGCAGTGAGCCAAGATCATAGCACTGTA,NA,NA chr1:90497768_A/G,178,181,176,179,129,58,170,181,220,154,145,175,25,38,12,25,12,7,0,0,0,0,0,0,0.140449438,0.209944751,0.068181818,0.139664804,0.093023256,0.120689655,0,0,0,0,0,0,0,0,chr1,90497768,A/G,3,3,0,0,ZNF326,.,UTR3,.,.,NM_001320185:c.*4508A>G\x3bNM_181781:c.*4508A>G\x3bNM_182976:c.*4508A>G,284695,+,,,,,CTGTTGTGAATTCTAATGCTTTCAGAAAATA,TATTTTCTGAAAGCATTAGAATTCACAACAG,A/G,CTGTTGTGAATTCTAATGCTTTCAGAAAATA,TATTTTCTGAAAGCATTAGAATTCACAACAG,+,,,A/G,,,A/G,CTGTTGTGAATTCTAATGCTTTCAGAAAATA,NA,NA chr1:90497779_A/G,182,186,175,178,129,58,171,185,233,157,152,185,52,58,41,54,31,15,0,0,0,0,0,0,0.285714286,0.311827957,0.234285714,0.303370787,0.240310078,0.25862069,0,0,0,0,0,0,0,0,chr1,90497779,A/G,3,3,0,0,ZNF326,.,UTR3,.,.,NM_001320185:c.*4519A>G\x3bNM_181781:c.*4519A>G\x3bNM_182976:c.*4519A>G,284695,+,,,,,TCTAATGCTTTCAGAAAATATTACGGAGAAT,ATTCTCCGTAATATTTTCTGAAAGCATTAGA,A/G,TCTAATGCTTTCAGAAAATATTACGGAGAAT,ATTCTCCGTAATATTTTCTGAAAGCATTAGA,+,,,A/G,,,A/G,TCTAATGCTTTCAGAAAATATTACGGAGAAT,NA,NA chr1:92975164_T/C,81,90,82,99,81,66,140,112,114,74,98,98,12,16,7,10,8,7,0,0,0,0,0,0,0.148148148,0.177777778,0.085365854,0.101010101,0.098765432,0.106060606,0,0,0,0,0,0,1,0,chr1,92975164,T/C,3,3,0,0,EVI5,.,UTR3,.,.,NM_001350197:c.*4049A>G\x3bNM_005665:c.*4049A>G\x3bNM_001308248:c.*4049A>G\x3bNM_001350198:c.*4314A>G,7813,-,,,,,CAAACTCCTGTACTCTAGTGATCCTCCTGCC,GGCAGGAGGATCACTAGAGTACAGGAGTTTG,T/C,CAAACTCCTGTACTCTAGTGATCCTCCTGCC,GGCAGGAGGATCACTAGAGTACAGGAGTTTG,-,,,A/G,,,A/G,GGCAGGAGGATCACTAGAGTACAGGAGTTTG,NA,NA chr10:17728338_A/G,103,99,108,95,102,89,121,118,151,93,115,134,13,14,15,10,15,28,0,0,0,0,0,0,0.126213592,0.141414141,0.138888889,0.105263158,0.147058824,0.314606742,0,0,0,0,0,0,0,0,chr10,17728338,A/G,3,3,0,0,STAM,.,intronic,.,.,.,8027,+,,,,,TTTTCTGAATGTTTTACAGTGAACATATTGG,CCAATATGTTCACTGTAAAACATTCAGAAAA,A/G,TTTTCTGAATGTTTTACAGTGAACATATTGG,CCAATATGTTCACTGTAAAACATTCAGAAAA,+,,,A/G,,,A/G,TTTTCTGAATGTTTTACAGTGAACATATTGG,NA,NA chr10:96372427_A/G,85,87,88,64,76,61,86,100,91,116,77,127,21,21,14,20,6,10,0,0,0,0,0,0,0.247058824,0.24137931,0.159090909,0.3125,0.078947368,0.163934426,0,0,0,0,0,0,1,1,chr10,96372427,A/G,3,3,0,0,HELLS;CYP2C18,.,intergenic,.,.,dist\x3d10571\x3bdist\x3d70824,3070;1562,+;+,AluSz,+,AluSz,+,GTGGCTCATGCCTGTAATCCCAGCATTTTGG,CCAAAATGCTGGGATTACAGGCATGAGCCAC,A/G,GTGGCTCATGCCTGTAATCCCAGCATTTTGG,CCAAAATGCTGGGATTACAGGCATGAGCCAC,+;+,+,+,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+10571,-70824 chr11:118619352_T/C,274,266,293,348,269,243,353,334,287,296,245,279,41,22,24,15,21,47,0,0,0,0,0,0,0.149635036,0.082706767,0.081911263,0.043103448,0.078066914,0.193415638,0,0,0,0,0,0,0,0,chr11,118619352,T/C,3,3,0,0,DDX6,.,UTR3,.,.,NM_001257191:c.*3462A>G\x3bNM_004397:c.*3462A>G,1656,-,,,,,GGTCAGGAGTGTGGCTAAAGGCAGTTTCTGA,TCAGAAACTGCCTTTAGCCACACTCCTGACC,T/C,GGTCAGGAGTGTGGCTAAAGGCAGTTTCTGA,TCAGAAACTGCCTTTAGCCACACTCCTGACC,-,,,A/G,,,A/G,TCAGAAACTGCCTTTAGCCACACTCCTGACC,NA,NA chr12:123253723_A/G,271,281,293,260,260,159,350,352,346,346,331,379,39,39,34,42,26,15,0,0,0,0,0,0,0.143911439,0.138790036,0.116040956,0.161538462,0.1,0.094339623,0,0,0,0,0,0,1,0,chr12,123253723,A/G,3,3,0,0,DENR,.,UTR3,.,.,NM_003677:c.*98A>G,8562,+,,,,,TATATACACATATATATGTATATATACACAT,ATGTGTATATATACATATATATGTGTATATA,A/G,TATATACACATATATATGTATATATACACAT,ATGTGTATATATACATATATATGTGTATATA,+,,,A/G,,,A/G,TATATACACATATATATGTATATATACACAT,NA,NA chr12:123253845_A/G,326,307,382,345,388,262,732,706,822,750,665,636,51,16,43,48,46,39,0,0,0,0,0,0,0.156441718,0.052117264,0.112565445,0.139130435,0.118556701,0.148854962,0,0,0,0,0,0,1,0,chr12,123253845,A/G,3,3,0,0,DENR,.,UTR3,.,.,NM_003677:c.*220A>G,8562,+,,,,,TACACATATATGTATACATATATACACATAT,ATATGTGTATATATGTATACATATATGTGTA,A/G,TACACATATATGTATACATATATACACATAT,ATATGTGTATATATGTATACATATATGTGTA,+,,,A/G,,,A/G,TACACATATATGTATACATATATACACATAT,NA,NA chr12:125512541_A/G,82,108,99,121,96,99,134,135,91,121,115,100,6,10,0,15,3,19,0,0,0,0,0,0,0.073170732,0.092592593,0,0.123966942,0.03125,0.191919192,0,0,0,0,0,0,0,0,chr12,125512541,A/G,2,3,0,0,THRIL,.,upstream,.,.,dist\x3d572,102659353,,,,,,CTGGGCCTAGATCAAATCTTTATCCATGCAC,GTGCATGGATAAAGATTTGATCTAGGCCCAG,A/G,CTGGGCCTAGATCAAATCTTTATCCATGCAC,GTGCATGGATAAAGATTTGATCTAGGCCCAG,,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,-572,NA chr12:24969821_T/C,80,112,79,94,117,84,144,107,58,102,107,99,24,23,20,25,27,31,0,0,0,0,0,0,0.3,0.205357143,0.253164557,0.265957447,0.230769231,0.369047619,0,0,0,0,0,0,1,0,chr12,24969821,T/C,3,3,0,0,BCAT1,.,UTR3,.,.,NM_001178091:c.*1121A>G\x3bNM_001178092:c.*1121A>G\x3bNM_005504:c.*1121A>G\x3bNM_001178094:c.*1121A>G\x3bNM_001178093:c.*1121A>G,586,-,,,,,GCTCCTATGAGAATCTAATGCTGCCACTGAG,CTCAGTGGCAGCATTAGATTCTCATAGGAGC,T/C,GCTCCTATGAGAATCTAATGCTGCCACTGAG,CTCAGTGGCAGCATTAGATTCTCATAGGAGC,-,,,A/G,,,A/G,CTCAGTGGCAGCATTAGATTCTCATAGGAGC,NA,NA chr12:51324627_A/G,83,67,78,118,74,74,90,90,105,99,110,114,36,27,29,32,20,31,0,0,0,0,0,0,0.43373494,0.402985075,0.371794872,0.271186441,0.27027027,0.418918919,0,0,0,0,0,0,1,1,chr12,51324627,A/G,3,3,0,0,METTL7A,.,UTR3,.,.,NM_014033:c.*694A>G,25840,+,AluSp,-,AluSp,-,GCCTCGGCCTCCCAAAGTGCTGTGATTACAG,CTGTAATCACAGCACTTTGGGAGGCCGAGGC,A/G,GCCTCGGCCTCCCAAAGTGCTGTGATTACAG,CTGTAATCACAGCACTTTGGGAGGCCGAGGC,+,-,-,A/G,T/C,T/C,A/G,GCCTCGGCCTCCCAAAGTGCTGTGATTACAG,NA,NA chr12:69237506_A/G,283,349,301,327,301,291,504,502,439,485,362,563,25,58,40,51,41,43,0,0,0,0,0,0,0.088339223,0.166189112,0.132890365,0.155963303,0.136212625,0.147766323,0,0,0,0,0,0,0,0,chr12,69237506,A/G,3,3,0,0,MDM2,.,UTR3,.,.,NM_001145339:c.*3877A>G\x3bNM_002392:c.*3877A>G\x3bNM_001278462:c.*3877A>G\x3bNM_001145337:c.*3877A>G\x3bNM_001145340:c.*3877A>G,4193,+,,,,,CTCTCTGTCTGTCTCAATAAATGGCCAAAGG,CCTTTGGCCATTTATTGAGACAGACAGAGAG,A/G,CTCTCTGTCTGTCTCAATAAATGGCCAAAGG,CCTTTGGCCATTTATTGAGACAGACAGAGAG,+,,,A/G,,,A/G,CTCTCTGTCTGTCTCAATAAATGGCCAAAGG,NA,NA chr12:69237507_A/G,282,350,299,328,305,296,504,502,440,484,362,563,30,62,53,48,39,46,0,0,0,0,0,0,0.106382979,0.177142857,0.177257525,0.146341463,0.127868852,0.155405405,0,0,0,0,0,0,0,0,chr12,69237507,A/G,3,3,0,0,MDM2,.,UTR3,.,.,NM_001145339:c.*3878A>G\x3bNM_002392:c.*3878A>G\x3bNM_001278462:c.*3878A>G\x3bNM_001145337:c.*3878A>G\x3bNM_001145340:c.*3878A>G,4193,+,,,,,TCTCTGTCTGTCTCAATAAATGGCCAAAGGG,CCCTTTGGCCATTTATTGAGACAGACAGAGA,A/G,TCTCTGTCTGTCTCAATAAATGGCCAAAGGG,CCCTTTGGCCATTTATTGAGACAGACAGAGA,+,,,A/G,,,A/G,TCTCTGTCTGTCTCAATAAATGGCCAAAGGG,NA,NA chr12:69237510_A/G,280,339,299,328,304,295,514,509,449,496,367,571,68,82,63,79,48,45,0,0,0,0,0,0,0.242857143,0.241887906,0.210702341,0.240853659,0.157894737,0.152542373,0,0,0,0,0,0,0,0,chr12,69237510,A/G,3,3,0,0,MDM2,.,UTR3,.,.,NM_001145339:c.*3881A>G\x3bNM_002392:c.*3881A>G\x3bNM_001278462:c.*3881A>G\x3bNM_001145337:c.*3881A>G\x3bNM_001145340:c.*3881A>G,4193,+,,,,,CTGTCTGTCTCAATAAATGGCCAAAGGGATT,AATCCCTTTGGCCATTTATTGAGACAGACAG,A/G,CTGTCTGTCTCAATAAATGGCCAAAGGGATT,AATCCCTTTGGCCATTTATTGAGACAGACAG,+,,,A/G,,,A/G,CTGTCTGTCTCAATAAATGGCCAAAGGGATT,NA,NA chr13:20246518_A/G,59,68,68,77,95,63,124,111,83,114,98,112,8,7,4,6,7,10,0,0,0,0,0,0,0.13559322,0.102941176,0.058823529,0.077922078,0.073684211,0.158730159,0,0,0,0,0,0,1,1,chr13,20246518,A/G,3,3,0,0,MPHOSPH8,.,UTR3,.,.,NM_017520:c.*503A>G,54737,+,AluSq2,-,AluSq2,-,TGAACTCCTGACCTCAGGTGATCCGCCCGCC,GGCGGGCGGATCACCTGAGGTCAGGAGTTCA,A/G,TGAACTCCTGACCTCAGGTGATCCGCCCGCC,GGCGGGCGGATCACCTGAGGTCAGGAGTTCA,+,-,-,A/G,T/C,T/C,A/G,TGAACTCCTGACCTCAGGTGATCCGCCCGCC,NA,NA chr13:37420144_T/C,79,75,69,79,64,63,65,97,79,79,52,93,14,7,0,10,3,10,0,0,0,0,0,0,0.17721519,0.093333333,0,0.126582278,0.046875,0.158730159,0,0,0,0,0,0,1,0,chr13,37420144,T/C,2,3,0,0,SMAD9,.,UTR3,.,.,NM_005905:c.*2669A>G\x3bNM_001127217:c.*2669A>G,4093,-,,,,,CTTTGTCACCCAGGCTAGAATGAAGTTGTAT,ATACAACTTCATTCTAGCCTGGGTGACAAAG,T/C,CTTTGTCACCCAGGCTAGAATGAAGTTGTAT,ATACAACTTCATTCTAGCCTGGGTGACAAAG,-,,,A/G,,,A/G,ATACAACTTCATTCTAGCCTGGGTGACAAAG,NA,NA chr14:19901107_T/C,53,78,107,56,81,76,140,106,148,102,116,130,11,11,19,6,7,9,0,0,0,0,0,0,0.20754717,0.141025641,0.177570093,0.107142857,0.086419753,0.118421053,0,0,0,0,0,0,1,0,chr14,19901107,T/C,3,3,0,0,BMS1P17;BMS1P18;BMS1P22;DUXAP10;LINC01296,.,ncRNA_intronic,.,.,.,101101776,-,,,,,ATGCGGTAAAGCATTTGATAAAATTCAACAT,ATGTTGAATTTTATCAAATGCTTTACCGCAT,T/C,ATGCGGTAAAGCATTTGATAAAATTCAACAT,ATGTTGAATTTTATCAAATGCTTTACCGCAT,-,,,A/G,,,A/G,ATGTTGAATTTTATCAAATGCTTTACCGCAT,NA,NA chr14:53109732_T/C,105,120,107,112,110,72,146,105,117,93,91,117,45,51,44,53,43,38,0,0,0,0,0,0,0.428571429,0.425,0.411214953,0.473214286,0.390909091,0.527777778,0,0,0,0,0,0,1,0,chr14,53109732,T/C,3,3,0,0,ERO1A,.,UTR3,.,.,NM_014584:c.*556A>G,30001,-,,,,,TGAATTTCAAACAAATAATTTTTTAGTATAA,TTATACTAAAAAATTATTTGTTTGAAATTCA,T/C,TGAATTTCAAACAAATAATTTTTTAGTATAA,TTATACTAAAAAATTATTTGTTTGAAATTCA,-,,,A/G,,,A/G,TTATACTAAAAAATTATTTGTTTGAAATTCA,NA,NA chr14:53109810_T/C,95,107,121,97,101,78,134,112,91,99,88,104,20,20,13,15,17,18,0,0,0,0,0,0,0.210526316,0.186915888,0.107438017,0.154639175,0.168316832,0.230769231,0,0,0,0,0,0,1,0,chr14,53109810,T/C,3,3,0,0,ERO1A,.,UTR3,.,.,NM_014584:c.*478A>G,30001,-,,,,,TCTGAAATTCAAATCTAACTGGGCAATCTTT,AAAGATTGCCCAGTTAGATTTGAATTTCAGA,T/C,TCTGAAATTCAAATCTAACTGGGCAATCTTT,AAAGATTGCCCAGTTAGATTTGAATTTCAGA,-,,,A/G,,,A/G,AAAGATTGCCCAGTTAGATTTGAATTTCAGA,NA,NA chr14:74526975_T/C,129,144,129,161,125,111,202,180,157,165,143,159,47,38,32,36,25,44,0,0,0,0,0,0,0.364341085,0.263888889,0.248062016,0.223602484,0.2,0.396396396,0,0,0,0,0,0,1,0,chr14,74526975,T/C,3,3,0,0,ALDH6A1,.,UTR3,.,.,NM_005589:c.*370A>G\x3bNM_001278593:c.*370A>G\x3bNM_001278594:c.*370A>G,4329,-,,,,,CCCAAAATGATGGAATTACAGGCGTGAGCCA,TGGCTCACGCCTGTAATTCCATCATTTTGGG,T/C,CCCAAAATGATGGAATTACAGGCGTGAGCCA,TGGCTCACGCCTGTAATTCCATCATTTTGGG,-,,,A/G,,,A/G,TGGCTCACGCCTGTAATTCCATCATTTTGGG,NA,NA chr14:74526984_T/C,124,141,127,156,124,111,201,182,158,161,142,159,10,12,17,15,5,23,0,0,0,0,0,0,0.080645161,0.085106383,0.133858268,0.096153846,0.040322581,0.207207207,0,0,0,0,0,0,1,0,chr14,74526984,T/C,3,3,0,0,ALDH6A1,.,UTR3,.,.,NM_005589:c.*361A>G\x3bNM_001278593:c.*361A>G\x3bNM_001278594:c.*361A>G,4329,-,,,,,ATGGAATTACAGGCGTGAGCCACCGCGCCTG,CAGGCGCGGTGGCTCACGCCTGTAATTCCAT,T/C,ATGGAATTACAGGCGTGAGCCACCGCGCCTG,CAGGCGCGGTGGCTCACGCCTGTAATTCCAT,-,,,A/G,,,A/G,CAGGCGCGGTGGCTCACGCCTGTAATTCCAT,NA,NA chr15:40954625_A/G,107,112,120,146,104,106,172,105,101,103,146,143,26,23,15,27,13,28,0,0,0,0,0,0,0.242990654,0.205357143,0.125,0.184931507,0.125,0.264150943,0,0,0,0,0,0,0,0,chr15,40954625,A/G,3,3,0,0,KNL1,.,UTR3,.,.,NM_144508:c.*239A>G\x3bNM_170589:c.*239A>G,57082,+,,,,,AAAGGTTTAAGTAATAGGACACTTAGGAAAA,TTTTCCTAAGTGTCCTATTACTTAAACCTTT,A/G,AAAGGTTTAAGTAATAGGACACTTAGGAAAA,TTTTCCTAAGTGTCCTATTACTTAAACCTTT,+,,,A/G,,,A/G,AAAGGTTTAAGTAATAGGACACTTAGGAAAA,NA,NA chr15:40955516_A/G,85,103,68,113,74,71,136,154,116,122,152,140,26,34,11,22,12,25,0,0,0,0,0,0,0.305882353,0.330097087,0.161764706,0.194690265,0.162162162,0.352112676,0,0,0,0,0,0,1,1,chr15,40955516,A/G,3,3,0,0,KNL1,.,downstream,.,.,dist\x3d635,57082,+,AluY,-,AluY,-,CCTGCCTCGGCTTCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGAAGCCGAGGCAGG,A/G,CCTGCCTCGGCTTCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGAAGCCGAGGCAGG,+,-,-,A/G,T/C,T/C,A/G,CCTGCCTCGGCTTCAAAGTGCTGGGATTACA,+635,NA chr15:40955517_A/G,85,102,67,112,74,70,136,153,116,122,153,139,29,18,12,19,20,13,0,0,0,0,0,0,0.341176471,0.176470588,0.179104478,0.169642857,0.27027027,0.185714286,0,0,0,0,0,0,1,1,chr15,40955517,A/G,3,3,0,0,KNL1,.,downstream,.,.,dist\x3d636,57082,+,AluY,-,AluY,-,CTGCCTCGGCTTCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGAAGCCGAGGCAG,A/G,CTGCCTCGGCTTCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGAAGCCGAGGCAG,+,-,-,A/G,T/C,T/C,A/G,CTGCCTCGGCTTCAAAGTGCTGGGATTACAG,+636,NA chr15:41590978_A/G,58,105,58,104,62,74,64,93,95,89,112,135,17,25,7,32,7,22,0,0,0,0,0,0,0.293103448,0.238095238,0.120689655,0.307692308,0.112903226,0.297297297,0,0,0,0,0,0,1,1,chr15,41590978,A/G,3,3,0,0,OIP5-AS1,.,ncRNA_exonic,.,.,.,729082,+,AluSx1,+,AluSx1,+,GATACGTGTAATCCCAGCTACTCGTGAGGCT,AGCCTCACGAGTAGCTGGGATTACACGTATC,A/G,GATACGTGTAATCCCAGCTACTCGTGAGGCT,AGCCTCACGAGTAGCTGGGATTACACGTATC,+,+,+,A/G,A/G,A/G,A/G,GATACGTGTAATCCCAGCTACTCGTGAGGCT,NA,NA chr15:41590982_A/G,53,101,50,100,59,73,60,81,86,78,109,123,12,22,6,16,5,12,0,0,0,0,0,0,0.226415094,0.217821782,0.12,0.16,0.084745763,0.164383562,0,0,0,0,0,0,1,1,chr15,41590982,A/G,3,3,0,0,OIP5-AS1,.,ncRNA_exonic,.,.,.,729082,+,AluSx1,+,AluSx1,+,CGTGTAATCCCAGCTACTCGTGAGGCTGAGG,CCTCAGCCTCACGAGTAGCTGGGATTACACG,A/G,CGTGTAATCCCAGCTACTCGTGAGGCTGAGG,CCTCAGCCTCACGAGTAGCTGGGATTACACG,+,+,+,A/G,A/G,A/G,A/G,CGTGTAATCCCAGCTACTCGTGAGGCTGAGG,NA,NA chr15:42860094_A/G,77,64,65,79,82,67,103,102,93,87,87,83,15,5,7,8,8,8,0,0,0,0,0,0,0.194805195,0.078125,0.107692308,0.101265823,0.097560976,0.119402985,0,0,0,0,0,0,1,1,chr15,42860094,A/G,3,3,0,0,HAUS2,.,UTR3,.,.,NM_001323630:c.*1080A>G\x3bNM_018097:c.*1080A>G\x3bNM_001323631:c.*1080A>G\x3bNM_001323632:c.*1080A>G\x3bNM_001130447:c.*1080A>G,55142,+,AluSx,+,AluSx,+,TAGCATGTGCCTGTAATCCCAGCTACTCAGG,CCTGAGTAGCTGGGATTACAGGCACATGCTA,A/G,TAGCATGTGCCTGTAATCCCAGCTACTCAGG,CCTGAGTAGCTGGGATTACAGGCACATGCTA,+,+,+,A/G,A/G,A/G,A/G,TAGCATGTGCCTGTAATCCCAGCTACTCAGG,NA,NA chr15:49419124_T/C,196,178,197,174,196,115,177,219,187,237,178,192,65,33,52,33,37,44,0,0,0,0,0,0,0.331632653,0.185393258,0.263959391,0.189655172,0.18877551,0.382608696,0,0,0,0,0,0,1,0,chr15,49419124,T/C,3,3,0,0,COPS2,.,UTR3,.,.,NM_004236:c.*1023A>G\x3bNM_001143887:c.*1023A>G,9318,-,,,,,CTTTGAATGCAATTCTAAAAGAGTAAACTCA,TGAGTTTACTCTTTTAGAATTGCATTCAAAG,T/C,CTTTGAATGCAATTCTAAAAGAGTAAACTCA,TGAGTTTACTCTTTTAGAATTGCATTCAAAG,-,,,A/G,,,A/G,TGAGTTTACTCTTTTAGAATTGCATTCAAAG,NA,NA chr16:70283139_T/C,77,74,51,97,74,55,94,111,110,104,127,125,9,9,4,14,7,14,0,0,0,0,0,0,0.116883117,0.121621622,0.078431373,0.144329897,0.094594595,0.254545455,0,0,0,0,0,0,1,1,chr16,70283139,T/C,3,3,0,0,EXOSC6,.,downstream,.,.,dist\x3d995,118460,-,AluSz,+,AluSz,+,AAAATCCATCTCTACTAAAAATACAAAAATT,AATTTTTGTATTTTTAGTAGAGATGGATTTT,T/C,AAAATCCATCTCTACTAAAAATACAAAAATT,AATTTTTGTATTTTTAGTAGAGATGGATTTT,-,+,+,A/G,T/C,T/C,A/G,AATTTTTGTATTTTTAGTAGAGATGGATTTT,+995,NA chr16:70608348_A/G,56,69,60,71,50,53,114,80,54,110,58,87,5,5,8,9,4,6,0,0,0,0,0,0,0.089285714,0.072463768,0.133333333,0.126760563,0.08,0.113207547,0,0,0,0,0,0,1,1,chr16,70608348,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*2632A>G,23450,+,AluJr,-,AluJr,-,GCCTTGGCCTCCCAAAGCACTGGGATTATAG,CTATAATCCCAGTGCTTTGGGAGGCCAAGGC,A/G,GCCTTGGCCTCCCAAAGCACTGGGATTATAG,CTATAATCCCAGTGCTTTGGGAGGCCAAGGC,+,-,-,A/G,T/C,T/C,A/G,GCCTTGGCCTCCCAAAGCACTGGGATTATAG,NA,NA chr16:70608658_A/G,82,108,92,137,80,92,172,135,159,125,105,155,10,15,16,17,13,11,0,0,0,0,0,0,0.12195122,0.138888889,0.173913043,0.124087591,0.1625,0.119565217,0,0,0,0,0,0,1,1,chr16,70608658,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*2942A>G,23450,+,AluSz,-,AluSz,-,AGCTCAGCCTACCAAAGTGCTGTGATTACAG,CTGTAATCACAGCACTTTGGTAGGCTGAGCT,A/G,AGCTCAGCCTACCAAAGTGCTGTGATTACAG,CTGTAATCACAGCACTTTGGTAGGCTGAGCT,+,-,-,A/G,T/C,T/C,A/G,AGCTCAGCCTACCAAAGTGCTGTGATTACAG,NA,NA chr16:70608670_A/G,86,111,90,136,75,85,177,135,162,123,110,160,12,15,5,14,5,14,0,0,0,0,0,0,0.139534884,0.135135135,0.055555556,0.102941176,0.066666667,0.164705882,0,0,0,0,0,0,1,1,chr16,70608670,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*2954A>G,23450,+,AluSz,-,AluSz,-,CAAAGTGCTGTGATTACAGGCGTGAGCCACC,GGTGGCTCACGCCTGTAATCACAGCACTTTG,A/G,CAAAGTGCTGTGATTACAGGCGTGAGCCACC,GGTGGCTCACGCCTGTAATCACAGCACTTTG,+,-,-,A/G,T/C,T/C,A/G,CAAAGTGCTGTGATTACAGGCGTGAGCCACC,NA,NA chr16:70609345_A/G,84,79,68,142,79,74,235,167,135,99,141,148,10,10,3,13,6,14,0,0,0,0,0,0,0.119047619,0.126582278,0.044117647,0.091549296,0.075949367,0.189189189,0,0,0,0,0,0,1,1,chr16,70609345,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*3629A>G,23450,+,AluSx,-,AluSx,-,GACCTCAGGTGATCCACCCACCTTGGTCTCC,GGAGACCAAGGTGGGTGGATCACCTGAGGTC,A/G,GACCTCAGGTGATCCACCCACCTTGGTCTCC,GGAGACCAAGGTGGGTGGATCACCTGAGGTC,+,-,-,A/G,T/C,T/C,A/G,GACCTCAGGTGATCCACCCACCTTGGTCTCC,NA,NA chr16:70609364_A/G,97,83,81,160,90,87,264,181,149,112,156,178,6,5,10,23,4,13,0,0,0,0,0,0,0.06185567,0.060240964,0.12345679,0.14375,0.044444444,0.149425287,0,0,0,0,0,0,1,1,chr16,70609364,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*3648A>G,23450,+,AluSx,-,AluSx,-,ACCTTGGTCTCCCAAAGCGCTGGGATTACAG,CTGTAATCCCAGCGCTTTGGGAGACCAAGGT,A/G,ACCTTGGTCTCCCAAAGCGCTGGGATTACAG,CTGTAATCCCAGCGCTTTGGGAGACCAAGGT,+,-,-,A/G,T/C,T/C,A/G,ACCTTGGTCTCCCAAAGCGCTGGGATTACAG,NA,NA chr16:70610771_A/G,107,115,101,142,120,99,255,190,133,181,158,151,15,19,11,21,11,19,0,0,0,0,0,0,0.140186916,0.165217391,0.108910891,0.147887324,0.091666667,0.191919192,0,0,0,0,0,0,1,1,chr16,70610771,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*5055A>G,23450,+,AluJo,+,AluJo,+,GGCATGGTGGCTCACACCTGTAATCCCAGCA,TGCTGGGATTACAGGTGTGAGCCACCATGCC,A/G,GGCATGGTGGCTCACACCTGTAATCCCAGCA,TGCTGGGATTACAGGTGTGAGCCACCATGCC,+,+,+,A/G,A/G,A/G,A/G,GGCATGGTGGCTCACACCTGTAATCCCAGCA,NA,NA chr16:70610994_A/G,102,98,148,143,123,93,226,182,71,137,133,132,11,8,20,16,10,12,0,0,0,0,0,0,0.107843137,0.081632653,0.135135135,0.111888112,0.081300813,0.129032258,0,0,0,0,0,0,1,1,chr16,70610994,A/G,3,3,0,0,SF3B3,.,UTR3,.,.,NM_012426:c.*5278A>G,23450,+,AluJo,+,AluJo,+,TGTGATTGCGCCACTACACTCCAGCCTGGAT,ATCCAGGCTGGAGTGTAGTGGCGCAATCACA,A/G,TGTGATTGCGCCACTACACTCCAGCCTGGAT,ATCCAGGCTGGAGTGTAGTGGCGCAATCACA,+,+,+,A/G,A/G,A/G,A/G,TGTGATTGCGCCACTACACTCCAGCCTGGAT,NA,NA chr16:75479250_T/C,159,141,143,207,142,101,197,262,262,198,244,265,24,6,6,21,11,16,0,0,0,0,0,0,0.150943396,0.042553191,0.041958042,0.101449275,0.077464789,0.158415842,0,0,0,0,0,0,1,1,chr16,75479250,T/C,3,3,0,0,TMEM170A,.,UTR3,.,.,NM_001304998:c.*2206A>G\x3bNM_001304997:c.*2206A>G\x3bNM_001304996:c.*2206A>G\x3bNM_145254:c.*2206A>G,124491,-,AluJb,-,AluJb,-,TCTTGCCCTGTGGCCTAAGCTGGAGTTCAGT,ACTGAACTCCAGCTTAGGCCACAGGGCAAGA,T/C,TCTTGCCCTGTGGCCTAAGCTGGAGTTCAGT,ACTGAACTCCAGCTTAGGCCACAGGGCAAGA,-,-,-,A/G,A/G,A/G,A/G,ACTGAACTCCAGCTTAGGCCACAGGGCAAGA,NA,NA chr16:81063432_A/G,86,85,77,106,81,82,146,162,115,112,129,120,8,7,10,12,10,11,0,0,0,0,0,0,0.093023256,0.082352941,0.12987013,0.113207547,0.12345679,0.134146341,0,0,0,0,0,0,1,1,chr16,81063432,A/G,3,3,0,0,CENPN,.,UTR3,.,.,NM_001270473:c.*1176A>G\x3bNM_001270474:c.*1176A>G\x3bNM_001100624:c.*1176A>G,55839,+,AluSz,-,AluSz,-,CAATCTGCCCATTTTAGCCTCCTAAAATGCT,AGCATTTTAGGAGGCTAAAATGGGCAGATTG,A/G,CAATCTGCCCATTTTAGCCTCCTAAAATGCT,AGCATTTTAGGAGGCTAAAATGGGCAGATTG,+,-,-,A/G,T/C,T/C,A/G,CAATCTGCCCATTTTAGCCTCCTAAAATGCT,NA,NA chr17:16286605_A/G,103,101,112,131,91,60,152,136,101,108,101,120,13,10,7,18,6,7,0,0,0,0,0,0,0.126213592,0.099009901,0.0625,0.13740458,0.065934066,0.116666667,0,0,0,0,0,0,1,1,chr17,16286605,A/G,3,3,0,0,UBB,.,downstream,.,.,dist\x3d546,7314,+,AluJr4,-,AluJr4,-,CAGTGGCACGATGACAGCTCACTATCATTCC,GGAATGATAGTGAGCTGTCATCGTGCCACTG,A/G,CAGTGGCACGATGACAGCTCACTATCATTCC,GGAATGATAGTGAGCTGTCATCGTGCCACTG,+,-,-,A/G,T/C,T/C,A/G,CAGTGGCACGATGACAGCTCACTATCATTCC,+546,NA chr17:290724_T/C,66,75,83,83,96,66,104,121,73,128,112,121,5,9,0,11,5,8,0,0,0,0,0,0,0.075757576,0.12,0,0.13253012,0.052083333,0.121212121,0,0,0,0,0,0,1,1,chr17,290724,T/C,2,3,0,0,RFLNB,.,UTR3,.,.,NM_182705:c.*2231A>G,359845,-,AluSg,+,AluSg,+,ACCTGTAATCCCAGCTGCTCAGGAGGCTGAG,CTCAGCCTCCTGAGCAGCTGGGATTACAGGT,T/C,ACCTGTAATCCCAGCTGCTCAGGAGGCTGAG,CTCAGCCTCCTGAGCAGCTGGGATTACAGGT,-,+,+,A/G,T/C,T/C,A/G,CTCAGCCTCCTGAGCAGCTGGGATTACAGGT,NA,NA chr17:291773_T/C,134,190,161,181,164,140,279,254,201,215,220,269,34,36,37,39,29,41,0,0,0,0,0,0,0.253731343,0.189473684,0.229813665,0.215469613,0.176829268,0.292857143,0,0,0,0,0,0,1,0,chr17,291773,T/C,3,3,0,0,RFLNB,.,UTR3,.,.,NM_182705:c.*1182A>G,359845,-,,,,,GCCTCAGTTTCCAAGTAGCTGAGACTACAGG,CCTGTAGTCTCAGCTACTTGGAAACTGAGGC,T/C,GCCTCAGTTTCCAAGTAGCTGAGACTACAGG,CCTGTAGTCTCAGCTACTTGGAAACTGAGGC,-,,,A/G,,,A/G,CCTGTAGTCTCAGCTACTTGGAAACTGAGGC,NA,NA chr17:35971590_T/C,93,94,104,113,116,70,147,149,141,124,101,134,23,26,20,27,27,20,0,0,0,0,0,0,0.247311828,0.276595745,0.192307692,0.238938053,0.232758621,0.285714286,0,0,0,0,0,0,1,1,chr17,35971590,T/C,3,3,0,0,DDX52,.,UTR3,.,.,NM_007010:c.*2751A>G\x3bNM_001291476:c.*2751A>G,11056,-,AluSz,+,AluSz,+,AGTTTGAGACCAGCCTGGCCAACATGGTGAA,TTCACCATGTTGGCCAGGCTGGTCTCAAACT,T/C,AGTTTGAGACCAGCCTGGCCAACATGGTGAA,TTCACCATGTTGGCCAGGCTGGTCTCAAACT,-,+,+,A/G,T/C,T/C,A/G,TTCACCATGTTGGCCAGGCTGGTCTCAAACT,NA,NA chr17:35971602_T/C,78,75,81,99,94,64,119,120,104,101,82,112,21,15,13,16,14,15,0,0,0,0,0,0,0.269230769,0.2,0.160493827,0.161616162,0.14893617,0.234375,0,0,0,0,0,0,1,1,chr17,35971602,T/C,3,3,0,0,DDX52,.,UTR3,.,.,NM_007010:c.*2739A>G\x3bNM_001291476:c.*2739A>G,11056,-,AluSz,+,AluSz,+,GCCTGGCCAACATGGTGAAACCCTGTCACTA,TAGTGACAGGGTTTCACCATGTTGGCCAGGC,T/C,GCCTGGCCAACATGGTGAAACCCTGTCACTA,TAGTGACAGGGTTTCACCATGTTGGCCAGGC,-,+,+,A/G,T/C,T/C,A/G,TAGTGACAGGGTTTCACCATGTTGGCCAGGC,NA,NA chr17:37005768_T/C,127,127,150,121,111,82,182,195,135,153,135,176,9,11,18,17,14,9,0,0,0,0,0,0,0.070866142,0.086614173,0.12,0.140495868,0.126126126,0.109756098,0,0,0,0,0,0,1,1,chr17,37005768,T/C,3,3,0,0,RPL23,.,downstream,.,.,dist\x3d553,9349,-,AluSg,-,AluSg,-,GCTAATTTTTGTATTTTTAGAAAAGAGGAGG,CCTCCTCTTTTCTAAAAATACAAAAATTAGC,T/C,GCTAATTTTTGTATTTTTAGAAAAGAGGAGG,CCTCCTCTTTTCTAAAAATACAAAAATTAGC,-,-,-,A/G,A/G,A/G,A/G,CCTCCTCTTTTCTAAAAATACAAAAATTAGC,+553,NA chr17:42880119_T/C,59,94,74,101,70,74,161,184,160,120,120,197,16,16,11,14,5,15,0,0,0,0,0,0,0.271186441,0.170212766,0.148648649,0.138613861,0.071428571,0.202702703,0,0,0,0,0,0,1,1,chr17,42880119,T/C,3,3,0,0,GJC1,.,UTR3,.,.,NM_001080383:c.*1876A>G\x3bNM_005497:c.*1876A>G,10052,-,AluJb,+,AluJb,+,TATAATACTAACACTTTGAGAGGCTGAGGCG,CGCCTCAGCCTCTCAAAGTGTTAGTATTATA,T/C,TATAATACTAACACTTTGAGAGGCTGAGGCG,CGCCTCAGCCTCTCAAAGTGTTAGTATTATA,-,+,+,A/G,T/C,T/C,A/G,CGCCTCAGCCTCTCAAAGTGTTAGTATTATA,NA,NA chr17:45195951_T/C,191,138,150,157,130,145,122,147,100,109,140,121,23,18,12,24,12,47,0,0,0,0,0,0,0.120418848,0.130434783,0.08,0.152866242,0.092307692,0.324137931,0,0,0,0,0,0,1,0,chr17,45195951,T/C,3,3,0,0,CDC27,.,UTR3,.,.,NM_001293091:c.*2350A>G\x3bNM_001256:c.*2350A>G\x3bNM_001293089:c.*2350A>G\x3bNM_001114091:c.*2350A>G,996,-,,,,,ACTTATGCACCAACCTAATATATGTGTGAAA,TTTCACACATATATTAGGTTGGTGCATAAGT,T/C,ACTTATGCACCAACCTAATATATGTGTGAAA,TTTCACACATATATTAGGTTGGTGCATAAGT,-,,,A/G,,,A/G,TTTCACACATATATTAGGTTGGTGCATAAGT,NA,NA chr17:57279077_A/G,125,133,127,171,114,95,128,157,87,91,146,110,45,25,25,23,25,19,0,0,0,0,0,0,0.36,0.187969925,0.196850394,0.134502924,0.219298246,0.2,0,0,0,0,0,0,1,1,chr17,57279077,A/G,3,3,0,0,PRR11,.,UTR3,.,.,NM_018304:c.*85A>G,55771,+,AluSq2,+,AluSq2,+,TGGCTCACACCTGTAATCCCAGCACTTTGGG,CCCAAAGTGCTGGGATTACAGGTGTGAGCCA,A/G,TGGCTCACACCTGTAATCCCAGCACTTTGGG,CCCAAAGTGCTGGGATTACAGGTGTGAGCCA,+,+,+,A/G,A/G,A/G,A/G,TGGCTCACACCTGTAATCCCAGCACTTTGGG,NA,NA chr17:57279273_A/G,84,93,125,124,108,70,239,244,238,200,251,216,19,26,19,21,22,8,0,0,0,0,0,0,0.226190476,0.279569892,0.152,0.169354839,0.203703704,0.114285714,0,0,0,0,0,0,1,1,chr17,57279273,A/G,3,3,0,0,PRR11,.,UTR3,.,.,NM_018304:c.*281A>G,55771,+,AluSq2,+,AluSq2,+,AGAGGCAGAGGTTGCAGTGAGCCAAGATCGC,GCGATCTTGGCTCACTGCAACCTCTGCCTCT,A/G,AGAGGCAGAGGTTGCAGTGAGCCAAGATCGC,GCGATCTTGGCTCACTGCAACCTCTGCCTCT,+,+,+,A/G,A/G,A/G,A/G,AGAGGCAGAGGTTGCAGTGAGCCAAGATCGC,NA,NA chr17:73940440_T/C,71,87,87,97,54,68,90,93,61,83,79,83,26,39,20,27,14,24,0,0,0,0,0,0,0.366197183,0.448275862,0.229885057,0.278350515,0.259259259,0.352941176,0,0,0,0,0,0,0,0,chr17,73940440,T/C,3,3,0,0,ACOX1,.,UTR3,.,.,NM_007292:c.*2389A>G\x3bNM_004035:c.*2389A>G\x3bNM_001185039:c.*2389A>G,51,-,,,,,TTGTCAGTGGCAGTCTAGTGTGGTAGAGAGA,TCTCTCTACCACACTAGACTGCCACTGACAA,T/C,TTGTCAGTGGCAGTCTAGTGTGGTAGAGAGA,TCTCTCTACCACACTAGACTGCCACTGACAA,-,,,A/G,,,A/G,TCTCTCTACCACACTAGACTGCCACTGACAA,NA,NA chr19:19792399_A/G,99,89,88,92,91,79,96,137,138,118,110,111,6,6,0,8,18,6,0,0,0,0,0,0,0.060606061,0.06741573,0,0.086956522,0.197802198,0.075949367,0,0,0,0,0,0,1,1,chr19,19792399,A/G,2,3,0,0,ZNF101,.,UTR3,.,.,NM_001300949:c.*1290A>G\x3bNM_033204:c.*1290A>G,94039,+,AluJb,+,AluJb,+,TCCCATGTATACAAAAAATAGAAAAGTTAGC,GCTAACTTTTCTATTTTTTGTATACATGGGA,A/G,TCCCATGTATACAAAAAATAGAAAAGTTAGC,GCTAACTTTTCTATTTTTTGTATACATGGGA,+,+,+,A/G,A/G,A/G,A/G,TCCCATGTATACAAAAAATAGAAAAGTTAGC,NA,NA chr19:21303090_A/G,87,82,96,130,87,97,167,172,175,129,175,176,15,12,9,31,9,9,0,0,0,0,0,0,0.172413793,0.146341463,0.09375,0.238461538,0.103448276,0.092783505,0,0,0,0,0,0,1,1,chr19,21303090,A/G,3,3,0,0,ZNF714,.,UTR3,.,.,NM_182515:c.*1955A>G,148206,+,AluSg,-,AluSg,-,CCTTGTGATCCACCCACCTTGGCCTCCAAAG,CTTTGGAGGCCAAGGTGGGTGGATCACAAGG,A/G,CCTTGTGATCCACCCACCTTGGCCTCCAAAG,CTTTGGAGGCCAAGGTGGGTGGATCACAAGG,+,-,-,A/G,T/C,T/C,A/G,CCTTGTGATCCACCCACCTTGGCCTCCAAAG,NA,NA chr19:21305305_A/G,97,86,77,97,75,70,130,119,115,126,100,132,0,7,7,7,13,9,0,0,0,0,0,0,0,0.081395349,0.090909091,0.072164948,0.173333333,0.128571429,0,0,0,0,0,0,1,1,chr19,21305305,A/G,2,3,0,0,ZNF714,.,UTR3,.,.,NM_182515:c.*4170A>G,148206,+,AluSx,+,AluSx,+,GTAGCCCAGCTACTCAGGAGGCTGAGGCAGA,TCTGCCTCAGCCTCCTGAGTAGCTGGGCTAC,A/G,GTAGCCCAGCTACTCAGGAGGCTGAGGCAGA,TCTGCCTCAGCCTCCTGAGTAGCTGGGCTAC,+,+,+,A/G,A/G,A/G,A/G,GTAGCCCAGCTACTCAGGAGGCTGAGGCAGA,NA,NA chr19:23404631_T/C,60,63,63,101,59,71,127,133,87,112,109,110,14,7,15,14,9,11,0,0,0,0,0,0,0.233333333,0.111111111,0.238095238,0.138613861,0.152542373,0.154929577,0,0,0,0,0,0,1,1,chr19,23404631,T/C,3,3,0,0,ZNF730;ZNF724,.,intergenic,.,.,dist\x3d74617\x3bdist\x3d1976,100129543;440519,+;-,AluSz,-,AluSz,-,GTAAACCACCTGCCTTGGCCTCCAAAGTGCT,AGCACTTTGGAGGCCAAGGCAGGTGGTTTAC,T/C,GTAAACCACCTGCCTTGGCCTCCAAAGTGCT,AGCACTTTGGAGGCCAAGGCAGGTGGTTTAC,+;-,-,-,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+74617,+1976 chr19:42376883_A/G,105,72,74,115,83,73,107,173,93,124,108,117,19,7,16,15,10,23,0,0,0,0,0,0,0.180952381,0.097222222,0.216216216,0.130434783,0.120481928,0.315068493,0,0,0,0,0,0,1,1,chr19,42376883,A/G,3,3,0,0,RPS19;CD79A,.,intergenic,.,.,dist\x3d1399\x3bdist\x3d4307,6223;973,+;+,AluSp,+,AluSp,+,CAGAAGAATCGCTCGAACCCCGGAGGCGGAG,CTCCGCCTCCGGGGTTCGAGCGATTCTTCTG,A/G,CAGAAGAATCGCTCGAACCCCGGAGGCGGAG,CTCCGCCTCCGGGGTTCGAGCGATTCTTCTG,+;+,+,+,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+1399,-4307 chr19:42376919_A/G,104,92,67,108,87,66,98,162,80,123,97,109,29,0,12,26,20,17,0,0,0,0,0,0,0.278846154,0,0.179104478,0.240740741,0.229885057,0.257575758,0,0,0,0,0,0,1,1,chr19,42376919,A/G,2,3,0,0,RPS19;CD79A,.,intergenic,.,.,dist\x3d1435\x3bdist\x3d4271,6223;973,+;+,AluSp,+,AluSp,+,AGTGGGTTGAGATCGAGCAATTGCAATCCAG,CTGGATTGCAATTGCTCGATCTCAACCCACT,A/G,AGTGGGTTGAGATCGAGCAATTGCAATCCAG,CTGGATTGCAATTGCTCGATCTCAACCCACT,+;+,+,+,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+1435,-4271 chr19:42376929_A/G,91,62,61,93,77,56,89,144,71,105,92,98,14,4,8,9,10,11,0,0,0,0,0,0,0.153846154,0.064516129,0.131147541,0.096774194,0.12987013,0.196428571,0,0,0,0,0,0,1,1,chr19,42376929,A/G,3,3,0,0,RPS19;CD79A,.,intergenic,.,.,dist\x3d1445\x3bdist\x3d4261,6223;973,+;+,AluSp,+,AluSp,+,GATCGAGCAATTGCAATCCAGCCTGGGCAAC,GTTGCCCAGGCTGGATTGCAATTGCTCGATC,A/G,GATCGAGCAATTGCAATCCAGCCTGGGCAAC,GTTGCCCAGGCTGGATTGCAATTGCTCGATC,+;+,+,+,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+1445,-4261 chr19:57815844_A/G,124,145,147,150,115,106,236,149,209,165,149,197,30,40,31,33,24,29,0,0,0,0,0,0,0.241935484,0.275862069,0.210884354,0.22,0.208695652,0.273584906,0,0,0,0,0,0,1,0,chr19,57815844,A/G,3,3,0,0,ZNF460;ZNF543,.,intergenic,.,.,dist\x3d10408\x3bdist\x3d16021,10794;125919,+;+,,,,,TTGTTGTTGTTTTATAGATATGGGGGTCTCA,TGAGACCCCCATATCTATAAAACAACAACAA,A/G,TTGTTGTTGTTTTATAGATATGGGGGTCTCA,TGAGACCCCCATATCTATAAAACAACAACAA,+;+,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+10408,-16021 chr19:59093997_A/G,72,56,66,91,88,61,111,97,95,90,129,84,4,5,7,9,3,13,0,0,0,0,0,0,0.055555556,0.089285714,0.106060606,0.098901099,0.034090909,0.213114754,0,0,0,0,0,0,1,1,chr19,59093997,A/G,3,3,0,0,CENPBD1P1,.,ncRNA_exonic,.,.,.,65996,+,AluY,-,AluY,-,CCGCCTTGGCGTCCCAAAGTGCTGGGATTAC,GTAATCCCAGCACTTTGGGACGCCAAGGCGG,A/G,CCGCCTTGGCGTCCCAAAGTGCTGGGATTAC,GTAATCCCAGCACTTTGGGACGCCAAGGCGG,+,-,-,A/G,T/C,T/C,A/G,CCGCCTTGGCGTCCCAAAGTGCTGGGATTAC,NA,NA chr19:59093998_A/G,72,56,65,91,87,61,110,97,96,90,129,84,21,12,14,19,13,19,0,0,0,0,0,0,0.291666667,0.214285714,0.215384615,0.208791209,0.149425287,0.31147541,0,0,0,0,0,0,1,1,chr19,59093998,A/G,3,3,0,0,CENPBD1P1,.,ncRNA_exonic,.,.,.,65996,+,AluY,-,AluY,-,CGCCTTGGCGTCCCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGGGACGCCAAGGCG,A/G,CGCCTTGGCGTCCCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGGGACGCCAAGGCG,+,-,-,A/G,T/C,T/C,A/G,CGCCTTGGCGTCCCAAAGTGCTGGGATTACA,NA,NA chr19:59093999_A/G,73,56,65,91,87,61,110,97,96,90,129,84,8,7,5,12,6,14,0,0,0,0,0,0,0.109589041,0.125,0.076923077,0.131868132,0.068965517,0.229508197,0,0,0,0,0,0,1,1,chr19,59093999,A/G,3,3,0,0,CENPBD1P1,.,ncRNA_exonic,.,.,.,65996,+,AluY,-,AluY,-,GCCTTGGCGTCCCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGGGACGCCAAGGC,A/G,GCCTTGGCGTCCCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGGGACGCCAAGGC,+,-,-,A/G,T/C,T/C,A/G,GCCTTGGCGTCCCAAAGTGCTGGGATTACAG,NA,NA chr19:6441862_T/C,228,266,211,363,245,227,446,384,546,256,498,376,34,36,39,57,27,70,0,0,0,0,0,0,0.149122807,0.135338346,0.184834123,0.157024793,0.110204082,0.308370044,0,0,0,0,0,0,0,0,chr19,6441862,T/C,3,3,0,0,SLC25A23,.,UTR3,.,.,NM_024103:c.*124A>G,79085,-,,,,,TGGGGCATAGGAGTCTAGGATCCAGGATCTG,CAGATCCTGGATCCTAGACTCCTATGCCCCA,T/C,TGGGGCATAGGAGTCTAGGATCCAGGATCTG,CAGATCCTGGATCCTAGACTCCTATGCCCCA,-,,,A/G,,,A/G,CAGATCCTGGATCCTAGACTCCTATGCCCCA,NA,NA chr19:7084644_A/G,167,162,145,182,158,157,170,172,176,139,138,194,36,27,18,28,16,29,0,0,0,0,0,0,0.215568862,0.166666667,0.124137931,0.153846154,0.101265823,0.184713376,0,0,0,0,0,0,1,1,chr19,7084644,A/G,3,3,0,0,ZNF557,.,UTR3,.,.,NM_024341:c.*889A>G\x3bNM_001044388:c.*889A>G\x3bNM_001044387:c.*889A>G,79230,+,AluJb,-,AluJb,-,ACTGGGATTACAGGCATGAACCACCATGCCC,GGGCATGGTGGTTCATGCCTGTAATCCCAGT,A/G,ACTGGGATTACAGGCATGAACCACCATGCCC,GGGCATGGTGGTTCATGCCTGTAATCCCAGT,+,-,-,A/G,T/C,T/C,A/G,ACTGGGATTACAGGCATGAACCACCATGCCC,NA,NA chr2:109493682_A/G,78,90,84,73,64,53,114,115,102,102,91,126,0,9,5,9,4,8,0,0,0,0,0,0,0,0.1,0.05952381,0.123287671,0.0625,0.150943396,0,0,0,0,0,0,1,1,chr2,109493682,A/G,2,3,0,0,CCDC138,.,intronic,.,.,.,165055,+,AluSx1,+,AluSx1,+,TAATCCCAGCACTCTAGGAGGCTGAGGTGGG,CCCACCTCAGCCTCCTAGAGTGCTGGGATTA,A/G,TAATCCCAGCACTCTAGGAGGCTGAGGTGGG,CCCACCTCAGCCTCCTAGAGTGCTGGGATTA,+,+,+,A/G,A/G,A/G,A/G,TAATCCCAGCACTCTAGGAGGCTGAGGTGGG,NA,NA chr2:128602992_T/C,96,156,88,137,85,57,205,206,203,162,157,225,19,0,14,20,16,4,0,0,0,0,0,0,0.197916667,0,0.159090909,0.145985401,0.188235294,0.070175439,0,0,0,0,0,0,1,1,chr2,128602992,T/C,2,3,0,0,POLR2D,.,downstream,.,.,dist\x3d848,5433,-,AluSp,-,AluSp,-,TTCGCTCTTGTTGCCTAGGCTGGAGTACAAT,ATTGTACTCCAGCCTAGGCAACAAGAGCGAA,T/C,TTCGCTCTTGTTGCCTAGGCTGGAGTACAAT,ATTGTACTCCAGCCTAGGCAACAAGAGCGAA,-,-,-,A/G,A/G,A/G,A/G,ATTGTACTCCAGCCTAGGCAACAAGAGCGAA,+848,NA chr2:128951491_A/G,83,127,93,107,67,54,117,170,134,143,116,151,8,22,0,11,9,5,0,0,0,0,0,0,0.096385542,0.173228346,0,0.102803738,0.134328358,0.092592593,0,0,0,0,0,0,0,0,chr2,128951491,A/G,2,3,0,0,UGGT1,.,UTR3,.,.,NM_020120:c.*4175A>G,56886,+,,,,,CAAGGGAAAAAGAAAAAGAGTTACAAGGGAA,TTCCCTTGTAACTCTTTTTCTTTTTCCCTTG,A/G,CAAGGGAAAAAGAAAAAGAGTTACAAGGGAA,TTCCCTTGTAACTCTTTTTCTTTTTCCCTTG,+,,,A/G,,,A/G,CAAGGGAAAAAGAAAAAGAGTTACAAGGGAA,NA,NA chr2:128951511_A/G,81,117,80,101,62,51,107,163,124,133,116,139,14,40,22,26,4,17,0,0,0,0,0,0,0.172839506,0.341880342,0.275,0.257425743,0.064516129,0.333333333,0,0,0,0,0,0,0,0,chr2,128951511,A/G,3,3,0,0,UGGT1,.,UTR3,.,.,NM_020120:c.*4195A>G,56886,+,,,,,TTACAAGGGAATTGTAGTCTTTTTCTGAATA,TATTCAGAAAAAGACTACAATTCCCTTGTAA,A/G,TTACAAGGGAATTGTAGTCTTTTTCTGAATA,TATTCAGAAAAAGACTACAATTCCCTTGTAA,+,,,A/G,,,A/G,TTACAAGGGAATTGTAGTCTTTTTCTGAATA,NA,NA chr2:203744406_T/C,81,84,75,76,57,56,110,138,90,136,96,119,0,7,9,7,7,12,0,0,0,0,0,0,0,0.083333333,0.12,0.092105263,0.122807018,0.214285714,0,0,0,0,0,0,1,1,chr2,203744406,T/C,2,3,0,0,WDR12,.,downstream,.,.,dist\x3d917,55759,-,AluSx,-,AluSx,-,GTGAGCCGCCTGCCTTGGCCACCCAAAATGC,GCATTTTGGGTGGCCAAGGCAGGCGGCTCAC,T/C,GTGAGCCGCCTGCCTTGGCCACCCAAAATGC,GCATTTTGGGTGGCCAAGGCAGGCGGCTCAC,-,-,-,A/G,A/G,A/G,A/G,GCATTTTGGGTGGCCAAGGCAGGCGGCTCAC,+917,NA chr2:20450819_T/C,139,118,131,113,100,123,104,152,194,134,99,158,37,26,36,30,21,57,0,0,0,0,0,0,0.26618705,0.220338983,0.27480916,0.265486726,0.21,0.463414634,0,0,0,0,0,0,0,0,chr2,20450819,T/C,3,3,0,0,PUM2,.,UTR3,.,.,NM_001282790:c.*527A>G\x3bNM_015317:c.*527A>G\x3bNM_001282752:c.*527A>G\x3bNM_001282791:c.*527A>G,23369,-,,,,,TATCAAAATACAACTTAACTCTTTTTAAAAT,ATTTTAAAAAGAGTTAAGTTGTATTTTGATA,T/C,TATCAAAATACAACTTAACTCTTTTTAAAAT,ATTTTAAAAAGAGTTAAGTTGTATTTTGATA,-,,,A/G,,,A/G,ATTTTAAAAAGAGTTAAGTTGTATTTTGATA,NA,NA chr2:206987738_T/C,118,109,135,147,102,69,175,196,216,176,162,195,17,9,0,13,12,9,0,0,0,0,0,0,0.144067797,0.082568807,0,0.088435374,0.117647059,0.130434783,0,0,0,0,0,0,1,1,chr2,206987738,T/C,2,3,0,0,NDUFS1,.,downstream,.,.,dist\x3d65,4719,-,AluJb,-,AluJb,-,TGTTGGGATTACAGGTGTAAGCCACCACACC,GGTGTGGTGGCTTACACCTGTAATCCCAACA,T/C,TGTTGGGATTACAGGTGTAAGCCACCACACC,GGTGTGGTGGCTTACACCTGTAATCCCAACA,-,-,-,A/G,A/G,A/G,A/G,GGTGTGGTGGCTTACACCTGTAATCCCAACA,+65,NA chr2:217366499_A/G,85,77,100,103,120,67,257,246,197,213,240,198,8,14,12,17,8,6,0,0,0,0,0,0,0.094117647,0.181818182,0.12,0.165048544,0.066666667,0.089552239,0,0,0,0,0,0,1,1,chr2,217366499,A/G,3,3,0,0,RPL37A,.,downstream,.,.,dist\x3d311,6168,+,AluSz,-,AluSz,-,AGGCTGGAGTGCAGTATACCAGTCTTGGCCC,GGGCCAAGACTGGTATACTGCACTCCAGCCT,A/G,AGGCTGGAGTGCAGTATACCAGTCTTGGCCC,GGGCCAAGACTGGTATACTGCACTCCAGCCT,+,-,-,A/G,T/C,T/C,A/G,AGGCTGGAGTGCAGTATACCAGTCTTGGCCC,+311,NA chr2:24223142_A/G,115,112,112,143,101,95,114,164,113,153,127,141,16,10,11,18,8,15,0,0,0,0,0,0,0.139130435,0.089285714,0.098214286,0.125874126,0.079207921,0.157894737,0,0,0,0,0,0,1,1,chr2,24223142,A/G,3,3,0,0,UBXN2A,.,UTR3,.,.,NM_181713:c.*405A>G,165324,+,AluSc,+,AluSc,+,AATACGACCGGGTACAGTGGTTCATGCCTGT,ACAGGCATGAACCACTGTACCCGGTCGTATT,A/G,AATACGACCGGGTACAGTGGTTCATGCCTGT,ACAGGCATGAACCACTGTACCCGGTCGTATT,+,+,+,A/G,A/G,A/G,A/G,AATACGACCGGGTACAGTGGTTCATGCCTGT,NA,NA chr2:3592607_T/C,100,107,81,96,76,60,127,194,134,163,156,170,24,32,23,17,12,17,0,0,0,0,0,0,0.24,0.299065421,0.283950617,0.177083333,0.157894737,0.283333333,0,0,0,0,0,0,1,1,chr2,3592607,T/C,3,3,0,0,RNASEH1,.,UTR3,.,.,NM_001286837:c.*768A>G\x3bNM_001286834:c.*768A>G\x3bNM_002936:c.*768A>G,246243,-,AluSz6,-,AluSz6,-,TGACCTCAAGTGATCTGCCCGCCTTGGCCTC,GAGGCCAAGGCGGGCAGATCACTTGAGGTCA,T/C,TGACCTCAAGTGATCTGCCCGCCTTGGCCTC,GAGGCCAAGGCGGGCAGATCACTTGAGGTCA,-,-,-,A/G,A/G,A/G,A/G,GAGGCCAAGGCGGGCAGATCACTTGAGGTCA,NA,NA chr2:37331929_T/C,216,241,181,280,136,197,291,365,500,284,287,355,53,53,35,63,23,69,0,0,0,0,0,0,0.24537037,0.219917012,0.193370166,0.225,0.169117647,0.350253807,0,0,0,0,0,0,1,0,chr2,37331929,T/C,3,3,0,0,EIF2AK2,.,downstream,.,.,dist\x3d355,5610,-,,,,,GATTTGTCTAATAATTTCCTCATGATTAAAT,ATTTAATCATGAGGAAATTATTAGACAAATC,T/C,GATTTGTCTAATAATTTCCTCATGATTAAAT,ATTTAATCATGAGGAAATTATTAGACAAATC,-,,,A/G,,,A/G,ATTTAATCATGAGGAAATTATTAGACAAATC,+355,NA chr2:37332042_T/C,127,204,122,223,112,134,180,196,285,149,177,225,16,31,11,31,11,30,0,0,0,0,0,0,0.125984252,0.151960784,0.090163934,0.139013453,0.098214286,0.223880597,0,0,0,0,0,0,1,0,chr2,37332042,T/C,3,3,0,0,EIF2AK2,.,downstream,.,.,dist\x3d242,5610,-,,,,,CACCTTGGGTGATGCTAAATTGAATCACTTG,CAAGTGATTCAATTTAGCATCACCCAAGGTG,T/C,CACCTTGGGTGATGCTAAATTGAATCACTTG,CAAGTGATTCAATTTAGCATCACCCAAGGTG,-,,,A/G,,,A/G,CAAGTGATTCAATTTAGCATCACCCAAGGTG,+242,NA chr2:37431520_A/G,89,78,63,88,98,90,160,118,106,130,170,183,12,8,5,10,19,8,0,0,0,0,0,0,0.134831461,0.102564103,0.079365079,0.113636364,0.193877551,0.088888889,0,0,0,0,0,0,1,1,chr2,37431520,A/G,3,3,0,0,CEBPZOS,.,UTR3,.,.,NM_001322374:c.*2517A>G\x3bNM_001322373:c.*2517A>G\x3bNM_001322376:c.*2513A>G\x3bNM_001322375:c.*76A>G,100505876,+,AluSc,-,AluSc,-,CTGCCTTCTGGGTTCAAGCGATTCTCCTGCC,GGCAGGAGAATCGCTTGAACCCAGAAGGCAG,A/G,CTGCCTTCTGGGTTCAAGCGATTCTCCTGCC,GGCAGGAGAATCGCTTGAACCCAGAAGGCAG,+,-,-,A/G,T/C,T/C,A/G,CTGCCTTCTGGGTTCAAGCGATTCTCCTGCC,NA,NA chr2:37431521_A/G,90,78,63,91,100,92,164,118,106,131,170,182,5,3,4,9,17,7,0,0,0,0,0,0,0.055555556,0.038461538,0.063492063,0.098901099,0.17,0.076086957,0,0,0,0,0,0,1,1,chr2,37431521,A/G,3,3,0,0,CEBPZOS,.,UTR3,.,.,NM_001322374:c.*2518A>G\x3bNM_001322373:c.*2518A>G\x3bNM_001322376:c.*2514A>G\x3bNM_001322375:c.*77A>G,100505876,+,AluSc,-,AluSc,-,TGCCTTCTGGGTTCAAGCGATTCTCCTGCCT,AGGCAGGAGAATCGCTTGAACCCAGAAGGCA,A/G,TGCCTTCTGGGTTCAAGCGATTCTCCTGCCT,AGGCAGGAGAATCGCTTGAACCCAGAAGGCA,+,-,-,A/G,T/C,T/C,A/G,TGCCTTCTGGGTTCAAGCGATTCTCCTGCCT,NA,NA chr2:85773327_T/C,70,62,66,61,64,59,101,115,87,79,89,70,14,5,7,6,4,15,0,0,0,0,0,0,0.2,0.080645161,0.106060606,0.098360656,0.0625,0.254237288,0,0,0,0,0,0,1,1,chr2,85773327,T/C,3,3,0,0,GGCX,.,UTR3,.,.,NM_001142269:c.*3730A>G\x3bNM_000821:c.*3730A>G,2677,-,AluY,+,AluY,+,CTATAATCCTAGCACTTTGGGAGGCCAAGGC,GCCTTGGCCTCCCAAAGTGCTAGGATTATAG,T/C,CTATAATCCTAGCACTTTGGGAGGCCAAGGC,GCCTTGGCCTCCCAAAGTGCTAGGATTATAG,-,+,+,A/G,T/C,T/C,A/G,GCCTTGGCCTCCCAAAGTGCTAGGATTATAG,NA,NA chr2:99812311_A/G,131,176,165,198,179,167,280,219,163,220,236,222,14,19,13,22,8,27,0,0,0,0,0,0,0.106870229,0.107954545,0.078787879,0.111111111,0.044692737,0.161676647,0,0,0,0,0,0,1,1,chr2,99812311,A/G,3,3,0,0,MRPL30,.,UTR3,.,.,NM_145212:c.*143A>G,51263,+,AluSx,+,AluSx,+,GCACTTTGGGAGGCCAAGGCGGGCAGATCAC,GTGATCTGCCCGCCTTGGCCTCCCAAAGTGC,A/G,GCACTTTGGGAGGCCAAGGCGGGCAGATCAC,GTGATCTGCCCGCCTTGGCCTCCCAAAGTGC,+,+,+,A/G,A/G,A/G,A/G,GCACTTTGGGAGGCCAAGGCGGGCAGATCAC,NA,NA chr2:99813003_A/G,204,224,248,275,262,211,403,312,267,289,274,319,30,48,39,40,43,49,0,0,0,0,0,0,0.147058824,0.214285714,0.157258065,0.145454545,0.164122137,0.232227488,0,0,0,0,0,0,1,1,chr2,99813003,A/G,3,3,0,0,MRPL30,.,UTR3,.,.,NM_145212:c.*835A>G,51263,+,AluJb,-,AluJb,-,AAACTCCTGGGTTCAAGCCATCCTCCCACCT,AGGTGGGAGGATGGCTTGAACCCAGGAGTTT,A/G,AAACTCCTGGGTTCAAGCCATCCTCCCACCT,AGGTGGGAGGATGGCTTGAACCCAGGAGTTT,+,-,-,A/G,T/C,T/C,A/G,AAACTCCTGGGTTCAAGCCATCCTCCCACCT,NA,NA chr2:99813031_A/G,175,220,217,240,223,178,316,269,218,231,224,283,14,14,15,18,16,28,0,0,0,0,0,0,0.08,0.063636364,0.069124424,0.075,0.071748879,0.157303371,0,0,0,0,0,0,1,1,chr2,99813031,A/G,3,3,0,0,MRPL30,.,UTR3,.,.,NM_145212:c.*863A>G,51263,+,AluJb,-,AluJb,-,CCTCAGCCTCCCAAAATGCTGGGATTACAGG,CCTGTAATCCCAGCATTTTGGGAGGCTGAGG,A/G,CCTCAGCCTCCCAAAATGCTGGGATTACAGG,CCTGTAATCCCAGCATTTTGGGAGGCTGAGG,+,-,-,A/G,T/C,T/C,A/G,CCTCAGCCTCCCAAAATGCTGGGATTACAGG,NA,NA chr20:25427756_A/G,82,90,59,91,87,77,156,166,63,140,145,110,6,4,4,9,6,11,0,0,0,0,0,0,0.073170732,0.044444444,0.06779661,0.098901099,0.068965517,0.142857143,0,0,0,0,0,0,1,1,chr20,25427756,A/G,3,3,0,0,GINS1,.,UTR3,.,.,NM_021067:c.*1129A>G,9837,+,AluSz,-,AluSz,-,TCTTGGCTCACTGCAATCTCTATCCCCTGGG,CCCAGGGGATAGAGATTGCAGTGAGCCAAGA,A/G,TCTTGGCTCACTGCAATCTCTATCCCCTGGG,CCCAGGGGATAGAGATTGCAGTGAGCCAAGA,+,-,-,A/G,T/C,T/C,A/G,TCTTGGCTCACTGCAATCTCTATCCCCTGGG,NA,NA chr20:25427815_A/G,83,98,74,99,104,90,157,174,93,157,141,133,12,10,10,13,14,18,0,0,0,0,0,0,0.144578313,0.102040816,0.135135135,0.131313131,0.134615385,0.2,0,0,0,0,0,0,1,1,chr20,25427815,A/G,3,3,0,0,GINS1,.,UTR3,.,.,NM_021067:c.*1188A>G,9837,+,AluSz,-,AluSz,-,CAAGTAGCTGGGATTACAGGCACAGGCCGCC,GGCGGCCTGTGCCTGTAATCCCAGCTACTTG,A/G,CAAGTAGCTGGGATTACAGGCACAGGCCGCC,GGCGGCCTGTGCCTGTAATCCCAGCTACTTG,+,-,-,A/G,T/C,T/C,A/G,CAAGTAGCTGGGATTACAGGCACAGGCCGCC,NA,NA chr20:25427946_A/G,128,124,118,130,114,114,180,184,142,163,173,212,11,9,15,14,5,18,0,0,0,0,0,0,0.0859375,0.072580645,0.127118644,0.107692308,0.043859649,0.157894737,0,0,0,0,0,0,1,1,chr20,25427946,A/G,3,3,0,0,GINS1,.,UTR3,.,.,NM_021067:c.*1319A>G,9837,+,AluSz,-,AluSz,-,CAAAGTTTTGGGATTACAAGTGTGGGCCACC,GGTGGCCCACACTTGTAATCCCAAAACTTTG,A/G,CAAAGTTTTGGGATTACAAGTGTGGGCCACC,GGTGGCCCACACTTGTAATCCCAAAACTTTG,+,-,-,A/G,T/C,T/C,A/G,CAAAGTTTTGGGATTACAAGTGTGGGCCACC,NA,NA chr20:25428722_A/G,69,68,50,92,99,76,172,153,144,102,121,162,10,9,5,9,16,6,0,0,0,0,0,0,0.144927536,0.132352941,0.1,0.097826087,0.161616162,0.078947368,0,0,0,0,0,0,1,1,chr20,25428722,A/G,3,3,0,0,GINS1,.,UTR3,.,.,NM_021067:c.*2095A>G,9837,+,AluJb,+,AluJb,+,CAGTGAGCTGAGATCACACCACTGTACTCCA,TGGAGTACAGTGGTGTGATCTCAGCTCACTG,A/G,CAGTGAGCTGAGATCACACCACTGTACTCCA,TGGAGTACAGTGGTGTGATCTCAGCTCACTG,+,+,+,A/G,A/G,A/G,A/G,CAGTGAGCTGAGATCACACCACTGTACTCCA,NA,NA chr20:25428724_A/G,72,70,50,96,102,75,178,157,154,111,126,171,18,16,4,12,25,20,0,0,0,0,0,0,0.25,0.228571429,0.08,0.125,0.245098039,0.266666667,0,0,0,0,0,0,1,1,chr20,25428724,A/G,3,3,0,0,GINS1,.,UTR3,.,.,NM_021067:c.*2097A>G,9837,+,AluJb,+,AluJb,+,GTGAGCTGAGATCACACCACTGTACTCCAGC,GCTGGAGTACAGTGGTGTGATCTCAGCTCAC,A/G,GTGAGCTGAGATCACACCACTGTACTCCAGC,GCTGGAGTACAGTGGTGTGATCTCAGCTCAC,+,+,+,A/G,A/G,A/G,A/G,GTGAGCTGAGATCACACCACTGTACTCCAGC,NA,NA chr20:35520959_T/C,61,57,60,68,67,51,95,105,100,70,71,76,10,11,12,8,4,12,0,0,0,0,0,0,0.163934426,0.192982456,0.2,0.117647059,0.059701493,0.235294118,0,0,0,0,0,0,1,0,chr20,35520959,T/C,3,3,0,0,SAMHD1,.,UTR3,.,.,NM_015474:c.*376A>G,25939,-,,,,,AGCTACTTGGGGGGCTGAGGCAGGAGGGTCG,CGACCCTCCTGCCTCAGCCCCCCAAGTAGCT,T/C,AGCTACTTGGGGGGCTGAGGCAGGAGGGTCG,CGACCCTCCTGCCTCAGCCCCCCAAGTAGCT,-,,,A/G,,,A/G,CGACCCTCCTGCCTCAGCCCCCCAAGTAGCT,NA,NA chr20:43706101_A/G,177,152,202,189,209,151,250,231,208,215,244,221,27,19,18,22,12,23,0,0,0,0,0,0,0.152542373,0.125,0.089108911,0.116402116,0.057416268,0.152317881,0,0,0,0,0,0,1,1,chr20,43706101,A/G,3,3,0,0,STK4,.,UTR3,.,.,NM_006282:c.*2284A>G,6789,+,AluSq2,-,AluSq2,-,CCAGGCTGGAGTACAATGGCACGATCTTGGC,GCCAAGATCGTGCCATTGTACTCCAGCCTGG,A/G,CCAGGCTGGAGTACAATGGCACGATCTTGGC,GCCAAGATCGTGCCATTGTACTCCAGCCTGG,+,-,-,A/G,T/C,T/C,A/G,CCAGGCTGGAGTACAATGGCACGATCTTGGC,NA,NA chr20:5175805_A/G,128,97,129,161,112,74,197,166,164,111,118,128,23,13,19,16,7,12,0,0,0,0,0,0,0.1796875,0.134020619,0.147286822,0.099378882,0.0625,0.162162162,0,0,0,0,0,0,1,0,chr20,5175805,A/G,3,3,0,0,CDS2,.,UTR3,.,.,NM_003818:c.*4925A>G,8760,+,,,,,GAGGTAATGCATGTAAGCATTTAGTACCATG,CATGGTACTAAATGCTTACATGCATTACCTC,A/G,GAGGTAATGCATGTAAGCATTTAGTACCATG,CATGGTACTAAATGCTTACATGCATTACCTC,+,,,A/G,,,A/G,GAGGTAATGCATGTAAGCATTTAGTACCATG,NA,NA chr20:5175812_A/G,124,97,123,156,113,71,188,162,163,102,117,130,17,15,14,20,5,20,0,0,0,0,0,0,0.137096774,0.154639175,0.113821138,0.128205128,0.044247788,0.281690141,0,0,0,0,0,0,1,0,chr20,5175812,A/G,3,3,0,0,CDS2,.,UTR3,.,.,NM_003818:c.*4932A>G,8760,+,,,,,TGCATGTAAGCATTTAGTACCATGCCTGGCA,TGCCAGGCATGGTACTAAATGCTTACATGCA,A/G,TGCATGTAAGCATTTAGTACCATGCCTGGCA,TGCCAGGCATGGTACTAAATGCTTACATGCA,+,,,A/G,,,A/G,TGCATGTAAGCATTTAGTACCATGCCTGGCA,NA,NA chr22:16169037_T/C,59,72,73,60,64,59,236,155,187,181,216,240,10,10,13,12,11,9,0,0,0,0,0,0,0.169491525,0.138888889,0.178082192,0.2,0.171875,0.152542373,0,0,0,0,0,0,1,1,chr22,16169037,T/C,3,3,0,0,BMS1P17;BMS1P18;BMS1P22;DUXAP8,.,ncRNA_intronic,.,.,.,101101776,-,AluSc8,-,AluSc8,-,CCTAGTAGCTAGGACTATAGGTGCATGCCAC,GTGGCATGCACCTATAGTCCTAGCTACTAGG,T/C,CCTAGTAGCTAGGACTATAGGTGCATGCCAC,GTGGCATGCACCTATAGTCCTAGCTACTAGG,-,-,-,A/G,A/G,A/G,A/G,GTGGCATGCACCTATAGTCCTAGCTACTAGG,NA,NA chr22:16169039_T/C,60,73,73,62,66,60,236,155,188,181,217,240,8,7,8,7,6,6,0,0,0,0,0,0,0.133333333,0.095890411,0.109589041,0.112903226,0.090909091,0.1,0,0,0,0,0,0,1,1,chr22,16169039,T/C,3,3,0,0,BMS1P17;BMS1P18;BMS1P22;DUXAP8,.,ncRNA_intronic,.,.,.,101101776,-,AluSc8,-,AluSc8,-,TAGTAGCTAGGACTATAGGTGCATGCCACCA,TGGTGGCATGCACCTATAGTCCTAGCTACTA,T/C,TAGTAGCTAGGACTATAGGTGCATGCCACCA,TGGTGGCATGCACCTATAGTCCTAGCTACTA,-,-,-,A/G,A/G,A/G,A/G,TGGTGGCATGCACCTATAGTCCTAGCTACTA,NA,NA chr22:18571289_A/G,75,81,95,159,76,72,104,101,71,112,106,123,9,8,20,29,5,7,0,0,0,0,0,0,0.12,0.098765432,0.210526316,0.182389937,0.065789474,0.097222222,0,0,0,0,0,0,1,1,chr22,18571289,A/G,3,3,0,0,PEX26,.,UTR3,.,.,NM_017929:c.*448A>G\x3bNM_001199319:c.*448A>G\x3bNM_001127649:c.*448A>G,55670,+,AluSz,+,AluSz,+,GTGACTCACGCCTGTAATCCCAGCACTTTGG,CCAAAGTGCTGGGATTACAGGCGTGAGTCAC,A/G,GTGACTCACGCCTGTAATCCCAGCACTTTGG,CCAAAGTGCTGGGATTACAGGCGTGAGTCAC,+,+,+,A/G,A/G,A/G,A/G,GTGACTCACGCCTGTAATCCCAGCACTTTGG,NA,NA chr22:18572728_A/G,121,109,115,205,118,108,160,164,127,184,156,181,25,24,28,40,22,18,0,0,0,0,0,0,0.20661157,0.220183486,0.243478261,0.195121951,0.186440678,0.166666667,0,0,0,0,0,0,1,1,chr22,18572728,A/G,3,3,0,0,PEX26,.,UTR3,.,.,NM_017929:c.*1887A>G\x3bNM_001199319:c.*1887A>G\x3bNM_001127649:c.*1887A>G,55670,+,AluY,-,AluY,-,CCACCTAGGCCTCCCAAAGTGCTGGGATTAC,GTAATCCCAGCACTTTGGGAGGCCTAGGTGG,A/G,CCACCTAGGCCTCCCAAAGTGCTGGGATTAC,GTAATCCCAGCACTTTGGGAGGCCTAGGTGG,+,-,-,A/G,T/C,T/C,A/G,CCACCTAGGCCTCCCAAAGTGCTGGGATTAC,NA,NA chr22:24968970_A/G,236,186,150,232,154,173,261,204,158,209,178,269,18,31,17,22,15,21,0,0,0,0,0,0,0.076271186,0.166666667,0.113333333,0.094827586,0.097402597,0.121387283,0,0,0,0,0,0,1,1,chr22,24968970,A/G,3,3,0,0,SNRPD3,.,UTR3,.,.,NM_001278656:c.*1025A>G\x3bNM_004175:c.*1025A>G,6634,+,AluJr,+,AluJr,+,TTTGAGAGGAGTTCAAAACCAGCCCGCGAGA,TCTCGCGGGCTGGTTTTGAACTCCTCTCAAA,A/G,TTTGAGAGGAGTTCAAAACCAGCCCGCGAGA,TCTCGCGGGCTGGTTTTGAACTCCTCTCAAA,+,+,+,A/G,A/G,A/G,A/G,TTTGAGAGGAGTTCAAAACCAGCCCGCGAGA,NA,NA chr22:24969087_A/G,218,192,105,189,124,167,72,80,65,168,162,227,29,25,18,22,10,19,0,0,0,0,0,0,0.133027523,0.130208333,0.171428571,0.116402116,0.080645161,0.113772455,0,0,0,0,0,0,1,1,chr22,24969087,A/G,3,3,0,0,SNRPD3,.,UTR3,.,.,NM_001278656:c.*1142A>G\x3bNM_004175:c.*1142A>G,6634,+,AluJr,+,AluJr,+,TGAGGTGGGAGGATCACTTGAGCCTGGGAGT,ACTCCCAGGCTCAAGTGATCCTCCCACCTCA,A/G,TGAGGTGGGAGGATCACTTGAGCCTGGGAGT,ACTCCCAGGCTCAAGTGATCCTCCCACCTCA,+,+,+,A/G,A/G,A/G,A/G,TGAGGTGGGAGGATCACTTGAGCCTGGGAGT,NA,NA chr22:24970693_A/G,163,150,120,186,199,191,219,154,147,212,272,328,36,14,13,15,27,32,0,0,0,0,0,0,0.220858896,0.093333333,0.108333333,0.080645161,0.135678392,0.167539267,0,0,0,0,0,0,1,1,chr22,24970693,A/G,3,3,0,0,SNRPD3,.,UTR3,.,.,NM_001278656:c.*2748A>G\x3bNM_004175:c.*2748A>G,6634,+,AluJb,-,AluJb,-,TTTTGTATTTTTTGTAGAGACAGGGTTTTGC,GCAAAACCCTGTCTCTACAAAAAATACAAAA,A/G,TTTTGTATTTTTTGTAGAGACAGGGTTTTGC,GCAAAACCCTGTCTCTACAAAAAATACAAAA,+,-,-,A/G,T/C,T/C,A/G,TTTTGTATTTTTTGTAGAGACAGGGTTTTGC,NA,NA chr22:24970719_A/G,225,233,161,249,289,271,310,219,208,285,359,406,33,42,20,17,51,46,0,0,0,0,0,0,0.146666667,0.180257511,0.124223602,0.068273092,0.176470588,0.169741697,0,0,0,0,0,0,1,1,chr22,24970719,A/G,3,3,0,0,SNRPD3,.,UTR3,.,.,NM_001278656:c.*2774A>G\x3bNM_004175:c.*2774A>G,6634,+,AluJb,-,AluJb,-,TTTGCCATGTTGCCCAAGCTGGTCTTGAACT,AGTTCAAGACCAGCTTGGGCAACATGGCAAA,A/G,TTTGCCATGTTGCCCAAGCTGGTCTTGAACT,AGTTCAAGACCAGCTTGGGCAACATGGCAAA,+,-,-,A/G,T/C,T/C,A/G,TTTGCCATGTTGCCCAAGCTGGTCTTGAACT,NA,NA chr22:36884348_T/C,173,184,175,211,163,178,383,274,270,239,192,292,18,23,11,25,9,25,0,0,0,0,0,0,0.104046243,0.125,0.062857143,0.118483412,0.055214724,0.140449438,0,0,0,0,0,0,1,1,chr22,36884348,T/C,3,3,0,0,FOXRED2,.,UTR3,.,.,NM_001102371:c.*1707A>G\x3bNM_024955:c.*1707A>G,80020,-,AluSx,-,AluSx,-,TCTTGCTTTGTCACCTAGGCTGGAGTACAGT,ACTGTACTCCAGCCTAGGTGACAAAGCAAGA,T/C,TCTTGCTTTGTCACCTAGGCTGGAGTACAGT,ACTGTACTCCAGCCTAGGTGACAAAGCAAGA,-,-,-,A/G,A/G,A/G,A/G,ACTGTACTCCAGCCTAGGTGACAAAGCAAGA,NA,NA chr22:36884508_T/C,110,109,120,119,100,117,250,210,186,159,120,192,22,19,19,16,22,19,0,0,0,0,0,0,0.2,0.174311927,0.158333333,0.134453782,0.22,0.162393162,0,0,0,0,0,0,1,1,chr22,36884508,T/C,3,3,0,0,FOXRED2,.,UTR3,.,.,NM_001102371:c.*1547A>G\x3bNM_024955:c.*1547A>G,80020,-,AluSx,-,AluSx,-,GACAAGGTTTTGCTATGTTGGCCAGGCTGGT,ACCAGCCTGGCCAACATAGCAAAACCTTGTC,T/C,GACAAGGTTTTGCTATGTTGGCCAGGCTGGT,ACCAGCCTGGCCAACATAGCAAAACCTTGTC,-,-,-,A/G,A/G,A/G,A/G,ACCAGCCTGGCCAACATAGCAAAACCTTGTC,NA,NA chr22:41326605_A/G,92,88,120,141,143,73,467,348,476,290,274,333,5,7,7,14,12,10,0,0,0,0,0,0,0.054347826,0.079545455,0.058333333,0.09929078,0.083916084,0.136986301,0,0,0,0,0,0,1,1,chr22,41326605,A/G,3,3,0,0,XPNPEP3,.,UTR3,.,.,NM_022098:c.*4166A>G,63929,+,AluSg7,-,AluSg7,-,TTGAGATAGAGTCTCACTCTGTCACCCAGGC,GCCTGGGTGACAGAGTGAGACTCTATCTCAA,A/G,TTGAGATAGAGTCTCACTCTGTCACCCAGGC,GCCTGGGTGACAGAGTGAGACTCTATCTCAA,+,-,-,A/G,T/C,T/C,A/G,TTGAGATAGAGTCTCACTCTGTCACCCAGGC,NA,NA chr22:41327652_A/G,70,62,95,88,80,57,199,175,157,125,100,150,12,5,8,11,8,9,0,0,0,0,0,0,0.171428571,0.080645161,0.084210526,0.125,0.1,0.157894737,0,0,0,0,0,0,1,1,chr22,41327652,A/G,3,3,0,0,XPNPEP3,.,UTR3,.,.,NM_022098:c.*5213A>G,63929,+,AluJr,+,AluJr,+,GAGCTTAGGAGGTCAAGGCTGCAGTGAGCCA,TGGCTCACTGCAGCCTTGACCTCCTAAGCTC,A/G,GAGCTTAGGAGGTCAAGGCTGCAGTGAGCCA,TGGCTCACTGCAGCCTTGACCTCCTAAGCTC,+,+,+,A/G,A/G,A/G,A/G,GAGCTTAGGAGGTCAAGGCTGCAGTGAGCCA,NA,NA chr22:41995260_T/C,105,123,131,142,130,90,290,220,118,184,188,164,29,32,29,29,31,23,0,0,0,0,0,0,0.276190476,0.260162602,0.221374046,0.204225352,0.238461538,0.255555556,0,0,0,0,0,0,0,0,chr22,41995260,T/C,3,3,0,0,DESI1,.,UTR3,.,.,NM_015704:c.*1841A>G,27351,-,,,,,CAAGGATGTCAGACCTGAGACTCGGGTACCT,AGGTACCCGAGTCTCAGGTCTGACATCCTTG,T/C,CAAGGATGTCAGACCTGAGACTCGGGTACCT,AGGTACCCGAGTCTCAGGTCTGACATCCTTG,-,,,A/G,,,A/G,AGGTACCCGAGTCTCAGGTCTGACATCCTTG,NA,NA chr22:44567729_A/G,59,89,100,131,100,58,220,181,146,147,118,157,12,28,26,38,15,15,0,0,0,0,0,0,0.203389831,0.314606742,0.26,0.290076336,0.15,0.25862069,0,0,0,0,0,0,1,0,chr22,44567729,A/G,3,3,0,0,PARVB;PARVG,.,intergenic,.,.,dist\x3d2617\x3bdist\x3d1107,29780;64098,+;+,,,,,TTGAGATAAGTTCTCACTGCGTTGCCCAGGC,GCCTGGGCAACGCAGTGAGAACTTATCTCAA,A/G,TTGAGATAAGTTCTCACTGCGTTGCCCAGGC,GCCTGGGCAACGCAGTGAGAACTTATCTCAA,+;+,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2617,-1107 chr3:101542453_A/G,77,70,88,84,52,60,97,76,74,63,80,96,17,4,9,15,7,5,0,0,0,0,0,0,0.220779221,0.057142857,0.102272727,0.178571429,0.134615385,0.083333333,0,0,0,0,0,0,1,1,chr3,101542453,A/G,3,3,0,0,NXPE3,.,UTR3,.,.,NM_145037:c.*1655A>G\x3bNM_001348992:c.*1655A>G\x3bNM_001348993:c.*1655A>G\x3bNM_001348994:c.*1655A>G\x3bNM_001348995:c.*1655A>G\x3bNM_001348997:c.*1655A>G\x3bNM_001134456:c.*1655A>G\x3bNM_001348990:c.*1655A>G\x3bNM_001348991:c.*1655A>G\x3bNM_001348996:c.*1655A>G\x3bNM_001348998:c.*1655A>G,91775,+,AluJr,+,AluJr,+,TAAGACCTCATCTCTACAAAAAATAAAAAAT,ATTTTTTATTTTTTGTAGAGATGAGGTCTTA,A/G,TAAGACCTCATCTCTACAAAAAATAAAAAAT,ATTTTTTATTTTTTGTAGAGATGAGGTCTTA,+,+,+,A/G,A/G,A/G,A/G,TAAGACCTCATCTCTACAAAAAATAAAAAAT,NA,NA chr3:10193358_A/G,546,644,707,697,658,432,1035,1048,901,1068,826,892,131,149,117,142,87,103,0,0,0,0,0,0,0.23992674,0.23136646,0.165487977,0.203730273,0.132218845,0.238425926,0,0,0,0,0,0,1,0,chr3,10193358,A/G,3,3,0,0,VHL,.,UTR3,.,.,NM_000551:c.*1709A>G\x3bNM_198156:c.*1709A>G,7428,+,,,,,CTTTTCACAAACATTAGTATAGTCTCCCTTT,AAAGGGAGACTATACTAATGTTTGTGAAAAG,A/G,CTTTTCACAAACATTAGTATAGTCTCCCTTT,AAAGGGAGACTATACTAATGTTTGTGAAAAG,+,,,A/G,,,A/G,CTTTTCACAAACATTAGTATAGTCTCCCTTT,NA,NA chr3:14986098_T/C,138,128,101,192,108,66,184,209,173,230,151,179,44,28,24,49,16,22,0,0,0,0,0,0,0.31884058,0.21875,0.237623762,0.255208333,0.148148148,0.333333333,0,0,0,0,0,0,1,0,chr3,14986098,T/C,3,3,0,0,FGD5-AS1,.,ncRNA_exonic,.,.,.,100505641,-,,,,,GGTGGCTCACGCCTGTAATCCTAACACTTTG,CAAAGTGTTAGGATTACAGGCGTGAGCCACC,T/C,GGTGGCTCACGCCTGTAATCCTAACACTTTG,CAAAGTGTTAGGATTACAGGCGTGAGCCACC,-,,,A/G,,,A/G,CAAAGTGTTAGGATTACAGGCGTGAGCCACC,NA,NA chr3:14986111_T/C,120,110,87,173,99,59,178,197,148,222,134,160,22,24,13,32,7,15,0,0,0,0,0,0,0.183333333,0.218181818,0.149425287,0.184971098,0.070707071,0.254237288,0,0,0,0,0,0,1,0,chr3,14986111,T/C,3,3,0,0,FGD5-AS1,.,ncRNA_exonic,.,.,.,100505641,-,,,,,TGTAATCCTAACACTTTGGGAGGCCAAGATG,CATCTTGGCCTCCCAAAGTGTTAGGATTACA,T/C,TGTAATCCTAACACTTTGGGAGGCCAAGATG,CATCTTGGCCTCCCAAAGTGTTAGGATTACA,-,,,A/G,,,A/G,CATCTTGGCCTCCCAAAGTGTTAGGATTACA,NA,NA chr3:14986399_T/C,147,170,122,205,102,94,181,312,260,289,227,259,24,17,10,22,9,15,0,0,0,0,0,0,0.163265306,0.1,0.081967213,0.107317073,0.088235294,0.159574468,0,0,0,0,0,0,1,1,chr3,14986399,T/C,3,3,0,0,FGD5-AS1,.,ncRNA_exonic,.,.,.,100505641,-,AluSq2,-,AluSq2,-,TAGTCAGGCTGGTCTTGAACTCCTGACCTCA,TGAGGTCAGGAGTTCAAGACCAGCCTGACTA,T/C,TAGTCAGGCTGGTCTTGAACTCCTGACCTCA,TGAGGTCAGGAGTTCAAGACCAGCCTGACTA,-,-,-,A/G,A/G,A/G,A/G,TGAGGTCAGGAGTTCAAGACCAGCCTGACTA,NA,NA chr3:14986453_T/C,150,146,120,198,88,78,174,285,245,284,214,237,39,36,18,40,9,26,0,0,0,0,0,0,0.26,0.246575342,0.15,0.202020202,0.102272727,0.333333333,0,0,0,0,0,0,1,1,chr3,14986453,T/C,3,3,0,0,FGD5-AS1,.,ncRNA_exonic,.,.,.,100505641,-,AluSq2,-,AluSq2,-,CCAAAATGCTGGGATTACAGGCATGAGCCAC,GTGGCTCATGCCTGTAATCCCAGCATTTTGG,T/C,CCAAAATGCTGGGATTACAGGCATGAGCCAC,GTGGCTCATGCCTGTAATCCCAGCATTTTGG,-,-,-,A/G,A/G,A/G,A/G,GTGGCTCATGCCTGTAATCCCAGCATTTTGG,NA,NA chr3:15113656_T/C,87,89,83,126,136,96,129,126,97,168,112,136,14,17,15,20,22,31,0,0,0,0,0,0,0.16091954,0.191011236,0.180722892,0.158730159,0.161764706,0.322916667,0,0,0,0,0,0,1,1,chr3,15113656,T/C,3,3,0,0,RBSN,.,UTR3,.,.,NM_022340:c.*1633A>G\x3bNM_001302378:c.*1633A>G,64145,-,AluSz6,+,AluSz6,+,TGTATTCCCAGCACTTTGGGAGGCCAAGGTG,CACCTTGGCCTCCCAAAGTGCTGGGAATACA,T/C,TGTATTCCCAGCACTTTGGGAGGCCAAGGTG,CACCTTGGCCTCCCAAAGTGCTGGGAATACA,-,+,+,A/G,T/C,T/C,A/G,CACCTTGGCCTCCCAAAGTGCTGGGAATACA,NA,NA chr3:156258230_T/C,203,161,172,213,227,148,465,391,304,441,482,389,51,45,39,66,51,35,0,0,0,0,0,0,0.251231527,0.279503106,0.226744186,0.309859155,0.224669604,0.236486486,0,0,0,0,0,0,1,1,chr3,156258230,T/C,3,3,0,0,SSR3,.,UTR3,.,.,NM_001308204:c.*2762A>G\x3bNM_001308197:c.*2762A>G\x3bNM_001308205:c.*2762A>G\x3bNM_007107:c.*2762A>G,6747,-,AluY,+,AluY,+,AAACCCCGTCTCTACTAAAAATACAAAAAAA,TTTTTTTGTATTTTTAGTAGAGACGGGGTTT,T/C,AAACCCCGTCTCTACTAAAAATACAAAAAAA,TTTTTTTGTATTTTTAGTAGAGACGGGGTTT,-,+,+,A/G,T/C,T/C,A/G,TTTTTTTGTATTTTTAGTAGAGACGGGGTTT,NA,NA chr3:156258295_T/C,157,127,165,218,207,116,461,339,274,367,381,346,33,35,36,46,41,35,0,0,0,0,0,0,0.210191083,0.275590551,0.218181818,0.211009174,0.198067633,0.301724138,0,0,0,0,0,0,1,1,chr3,156258295,T/C,3,3,0,0,SSR3,.,UTR3,.,.,NM_001308204:c.*2697A>G\x3bNM_001308197:c.*2697A>G\x3bNM_001308205:c.*2697A>G\x3bNM_007107:c.*2697A>G,6747,-,AluY,+,AluY,+,AGCTACTCGGCAGGCTGAGGCAGGAGAATGG,CCATTCTCCTGCCTCAGCCTGCCGAGTAGCT,T/C,AGCTACTCGGCAGGCTGAGGCAGGAGAATGG,CCATTCTCCTGCCTCAGCCTGCCGAGTAGCT,-,+,+,A/G,T/C,T/C,A/G,CCATTCTCCTGCCTCAGCCTGCCGAGTAGCT,NA,NA chr3:179117263_T/C,75,79,61,68,59,54,167,133,132,143,110,142,9,0,5,5,8,5,0,0,0,0,0,0,0.12,0,0.081967213,0.073529412,0.13559322,0.092592593,0,0,0,0,0,0,1,1,chr3,179117263,T/C,2,3,0,0,GNB4,.,UTR3,.,.,NM_021629:c.*1738A>G,59345,-,AluSz,-,AluSz,-,CCCAAATTGCTGGGATTATAGGTGTAAGCCA,TGGCTTACACCTATAATCCCAGCAATTTGGG,T/C,CCCAAATTGCTGGGATTATAGGTGTAAGCCA,TGGCTTACACCTATAATCCCAGCAATTTGGG,-,-,-,A/G,A/G,A/G,A/G,TGGCTTACACCTATAATCCCAGCAATTTGGG,NA,NA chr3:179117264_T/C,75,54,61,68,59,55,168,133,132,143,109,142,14,6,2,8,4,9,0,0,0,0,0,0,0.186666667,0.111111111,0.032786885,0.117647059,0.06779661,0.163636364,0,0,0,0,0,0,1,1,chr3,179117264,T/C,3,3,0,0,GNB4,.,UTR3,.,.,NM_021629:c.*1737A>G,59345,-,AluSz,-,AluSz,-,CCAAATTGCTGGGATTATAGGTGTAAGCCAC,GTGGCTTACACCTATAATCCCAGCAATTTGG,T/C,CCAAATTGCTGGGATTATAGGTGTAAGCCAC,GTGGCTTACACCTATAATCCCAGCAATTTGG,-,-,-,A/G,A/G,A/G,A/G,GTGGCTTACACCTATAATCCCAGCAATTTGG,NA,NA chr3:44791062_T/C,110,118,103,132,108,89,162,241,257,210,240,251,25,26,16,25,14,28,0,0,0,0,0,0,0.227272727,0.220338983,0.155339806,0.189393939,0.12962963,0.314606742,0,0,0,0,0,0,0,0,chr3,44791062,T/C,3,3,0,0,KIAA1143,.,UTR3,.,.,NM_020696:c.*3771A>G\x3bNM_001320334:c.*3979A>G,57456,-,,,,,TTGAGGAATCACCTCTAAAGGCTCAGACTTT,AAAGTCTGAGCCTTTAGAGGTGATTCCTCAA,T/C,TTGAGGAATCACCTCTAAAGGCTCAGACTTT,AAAGTCTGAGCCTTTAGAGGTGATTCCTCAA,-,,,A/G,,,A/G,AAAGTCTGAGCCTTTAGAGGTGATTCCTCAA,NA,NA chr3:73026607_A/G,59,83,98,62,60,50,122,109,121,97,118,117,28,24,33,24,10,21,0,0,0,0,0,0,0.474576271,0.289156627,0.336734694,0.387096774,0.166666667,0.42,0,0,0,0,0,0,1,0,chr3,73026607,A/G,3,3,0,0,GXYLT2;PPP4R2,.,intergenic,.,.,dist\x3d2085\x3bdist\x3d19287,727936;151987,+;+,,,,,CCTAACTTCCATCCTAGTTTCCTTTCTACTT,AAGTAGAAAGGAAACTAGGATGGAAGTTAGG,A/G,CCTAACTTCCATCCTAGTTTCCTTTCTACTT,AAGTAGAAAGGAAACTAGGATGGAAGTTAGG,+;+,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2085,-19287 chr4:106767318_A/G,155,214,136,189,160,137,207,266,219,205,217,260,29,43,13,36,26,36,0,0,0,0,0,0,0.187096774,0.200934579,0.095588235,0.19047619,0.1625,0.262773723,0,0,0,0,0,0,1,1,chr4,106767318,A/G,3,3,0,0,GSTCD,.,UTR3,.,.,NM_024751:c.*584A>G\x3bNM_001031720:c.*584A>G,79807,+,AluJb,+,AluJb,+,TGGTGGCTCATGCCTATAATCCCAGCACTTT,AAAGTGCTGGGATTATAGGCATGAGCCACCA,A/G,TGGTGGCTCATGCCTATAATCCCAGCACTTT,AAAGTGCTGGGATTATAGGCATGAGCCACCA,+,+,+,A/G,A/G,A/G,A/G,TGGTGGCTCATGCCTATAATCCCAGCACTTT,NA,NA chr4:106767952_A/G,70,54,81,63,50,60,90,86,79,80,81,93,15,9,22,15,12,30,0,0,0,0,0,0,0.214285714,0.166666667,0.271604938,0.238095238,0.24,0.5,0,0,0,0,0,0,1,1,chr4,106767952,A/G,3,3,0,0,GSTCD,.,UTR3,.,.,NM_024751:c.*1218A>G\x3bNM_001031720:c.*1218A>G,79807,+,AluSq,-,AluSq,-,CGAGTAGCTAGGATTATAGGCACCTGCCACC,GGTGGCAGGTGCCTATAATCCTAGCTACTCG,A/G,CGAGTAGCTAGGATTATAGGCACCTGCCACC,GGTGGCAGGTGCCTATAATCCTAGCTACTCG,+,-,-,A/G,T/C,T/C,A/G,CGAGTAGCTAGGATTATAGGCACCTGCCACC,NA,NA chr4:139966694_A/G,81,70,79,94,94,88,135,120,86,117,109,127,10,12,11,12,13,16,0,0,0,0,0,0,0.12345679,0.171428571,0.139240506,0.127659574,0.138297872,0.181818182,0,0,0,0,0,0,1,1,chr4,139966694,A/G,3,3,0,0,NOCT,.,UTR3,.,.,NM_012118:c.*66A>G,25819,+,AluY,-,AluY,-,TTTTTTTTTTGAGACAGAGTCTCGCTCTGTT,AACAGAGCGAGACTCTGTCTCAAAAAAAAAA,A/G,TTTTTTTTTTGAGACAGAGTCTCGCTCTGTT,AACAGAGCGAGACTCTGTCTCAAAAAAAAAA,+,-,-,A/G,T/C,T/C,A/G,TTTTTTTTTTGAGACAGAGTCTCGCTCTGTT,NA,NA chr4:177252238_A/G,230,251,188,209,169,187,146,171,111,161,157,151,40,37,28,26,21,74,0,0,0,0,0,0,0.173913043,0.147410359,0.14893617,0.124401914,0.124260355,0.395721925,0,0,0,0,0,0,0,0,chr4,177252238,A/G,3,3,0,0,SPCS3,.,UTR3,.,.,NM_021928:c.*2757A>G,60559,+,,,,,CGTCAGCCAATTCATAGCTGGGCTTTAAGAT,ATCTTAAAGCCCAGCTATGAATTGGCTGACG,A/G,CGTCAGCCAATTCATAGCTGGGCTTTAAGAT,ATCTTAAAGCCCAGCTATGAATTGGCTGACG,+,,,A/G,,,A/G,CGTCAGCCAATTCATAGCTGGGCTTTAAGAT,NA,NA chr4:57326082_A/G,432,441,480,595,457,421,779,734,376,670,784,699,95,122,98,137,95,120,0,0,0,0,0,0,0.219907407,0.276643991,0.204166667,0.230252101,0.207877462,0.285035629,0,0,0,0,0,0,1,1,chr4,57326082,A/G,3,3,0,0,PAICS,.,UTR3,.,.,NM_006452:c.*378A>G\x3bNM_001079524:c.*378A>G\x3bNM_001079525:c.*378A>G,10606,+,AluJb,-,AluJb,-,TTTTTTTTTTGAGACAGGGTCTCACTGTCGC,GCGACAGTGAGACCCTGTCTCAAAAAAAAAA,A/G,TTTTTTTTTTGAGACAGGGTCTCACTGTCGC,GCGACAGTGAGACCCTGTCTCAAAAAAAAAA,+,-,-,A/G,T/C,T/C,A/G,TTTTTTTTTTGAGACAGGGTCTCACTGTCGC,NA,NA chr5:115165563_T/C,76,70,78,63,72,54,107,102,78,71,116,102,5,0,9,7,11,11,0,0,0,0,0,0,0.065789474,0,0.115384615,0.111111111,0.152777778,0.203703704,0,0,0,0,0,0,1,1,chr5,115165563,T/C,2,3,0,0,ATG12,.,UTR3,.,.,NM_004707:c.*1938A>G\x3bNM_001277783:c.*1999A>G,9140,-,AluSq2,+,AluSq2,+,CTATAATCCCAGCACTTTGGGAGGCCAAGGC,GCCTTGGCCTCCCAAAGTGCTGGGATTATAG,T/C,CTATAATCCCAGCACTTTGGGAGGCCAAGGC,GCCTTGGCCTCCCAAAGTGCTGGGATTATAG,-,+,+,A/G,T/C,T/C,A/G,GCCTTGGCCTCCCAAAGTGCTGGGATTATAG,NA,NA chr5:121366411_A/G,113,109,129,124,121,110,222,175,173,145,150,182,20,19,13,13,13,18,0,0,0,0,0,0,0.17699115,0.174311927,0.100775194,0.10483871,0.107438017,0.163636364,0,0,0,0,0,0,1,0,chr5,121366411,A/G,3,3,0,0,SRFBP1;LOX,.,intergenic,.,.,dist\x3d2116\x3bdist\x3d32479,153443;4015,+;-,,,,,TGTCTTTTTTGAGTAAGTCTGAAGTCTGGGC,GCCCAGACTTCAGACTTACTCAAAAAAGACA,A/G,TGTCTTTTTTGAGTAAGTCTGAAGTCTGGGC,GCCCAGACTTCAGACTTACTCAAAAAAGACA,+;-,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2116,+32479 chr5:121366418_A/G,114,109,131,125,121,110,222,175,173,149,151,192,27,19,14,11,9,18,0,0,0,0,0,0,0.236842105,0.174311927,0.106870229,0.088,0.074380165,0.163636364,0,0,0,0,0,0,1,0,chr5,121366418,A/G,3,3,0,0,SRFBP1;LOX,.,intergenic,.,.,dist\x3d2123\x3bdist\x3d32472,153443;4015,+;-,,,,,TTTGAGTAAGTCTGAAGTCTGGGCTTCCTCA,TGAGGAAGCCCAGACTTCAGACTTACTCAAA,A/G,TTTGAGTAAGTCTGAAGTCTGGGCTTCCTCA,TGAGGAAGCCCAGACTTCAGACTTACTCAAA,+;-,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2123,+32472 chr5:121367139_A/G,63,73,81,84,72,64,132,125,122,89,79,114,6,7,8,19,5,10,0,0,0,0,0,0,0.095238095,0.095890411,0.098765432,0.226190476,0.069444444,0.15625,0,0,0,0,0,0,1,0,chr5,121367139,A/G,3,3,0,0,SRFBP1;LOX,.,intergenic,.,.,dist\x3d2844\x3bdist\x3d31751,153443;4015,+;-,,,,,TTCACACTTACTCAAAAAAGACATTGAAAAC,GTTTTCAATGTCTTTTTTGAGTAAGTGTGAA,A/G,TTCACACTTACTCAAAAAAGACATTGAAAAC,GTTTTCAATGTCTTTTTTGAGTAAGTGTGAA,+;-,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2844,+31751 chr5:121367140_A/G,62,74,79,84,73,66,133,125,122,90,79,114,18,25,25,30,17,26,0,0,0,0,0,0,0.290322581,0.337837838,0.316455696,0.357142857,0.232876712,0.393939394,0,0,0,0,0,0,1,0,chr5,121367140,A/G,3,3,0,0,SRFBP1;LOX,.,intergenic,.,.,dist\x3d2845\x3bdist\x3d31750,153443;4015,+;-,,,,,TCACACTTACTCAAAAAAGACATTGAAAACG,CGTTTTCAATGTCTTTTTTGAGTAAGTGTGA,A/G,TCACACTTACTCAAAAAAGACATTGAAAACG,CGTTTTCAATGTCTTTTTTGAGTAAGTGTGA,+;-,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2845,+31750 chr5:121367141_A/G,68,76,82,85,73,67,132,126,123,91,79,114,7,6,7,12,4,10,0,0,0,0,0,0,0.102941176,0.078947368,0.085365854,0.141176471,0.054794521,0.149253731,0,0,0,0,0,0,1,0,chr5,121367141,A/G,3,3,0,0,SRFBP1;LOX,.,intergenic,.,.,dist\x3d2846\x3bdist\x3d31749,153443;4015,+;-,,,,,CACACTTACTCAAAAAAGACATTGAAAACGC,GCGTTTTCAATGTCTTTTTTGAGTAAGTGTG,A/G,CACACTTACTCAAAAAAGACATTGAAAACGC,GCGTTTTCAATGTCTTTTTTGAGTAAGTGTG,+;-,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2846,+31749 chr5:125961246_A/G,83,84,62,114,56,67,65,80,57,64,75,68,10,14,7,8,8,9,0,0,0,0,0,0,0.120481928,0.166666667,0.112903226,0.070175439,0.142857143,0.134328358,0,0,0,0,0,0,1,1,chr5,125961246,A/G,3,3,0,0,PHAX,.,UTR3,.,.,NM_032177:c.*710A>G,51808,+,AluSz,+,AluSz,+,GTGAGCTGAGATCGTACCACTGTACTCCAGC,GCTGGAGTACAGTGGTACGATCTCAGCTCAC,A/G,GTGAGCTGAGATCGTACCACTGTACTCCAGC,GCTGGAGTACAGTGGTACGATCTCAGCTCAC,+,+,+,A/G,A/G,A/G,A/G,GTGAGCTGAGATCGTACCACTGTACTCCAGC,NA,NA chr5:125962030_A/G,136,144,130,184,145,118,289,308,350,262,283,359,31,25,14,29,18,30,0,0,0,0,0,0,0.227941176,0.173611111,0.107692308,0.157608696,0.124137931,0.254237288,0,0,0,0,0,0,1,1,chr5,125962030,A/G,3,3,0,0,PHAX,.,UTR3,.,.,NM_032177:c.*1494A>G,51808,+,AluSx,+,AluSx,+,GTGGCTCATGTGTGTAATCCCAGCACTCTGG,CCAGAGTGCTGGGATTACACACATGAGCCAC,A/G,GTGGCTCATGTGTGTAATCCCAGCACTCTGG,CCAGAGTGCTGGGATTACACACATGAGCCAC,+,+,+,A/G,A/G,A/G,A/G,GTGGCTCATGTGTGTAATCCCAGCACTCTGG,NA,NA chr5:130538362_A/G,83,116,73,115,99,72,185,222,203,172,175,191,16,28,12,32,14,19,0,0,0,0,0,0,0.192771084,0.24137931,0.164383562,0.27826087,0.141414141,0.263888889,0,0,0,0,0,0,1,0,chr5,130538362,A/G,3,3,0,0,LYRM7,.,UTR3,.,.,NM_181705:c.*3068A>G\x3bNM_001293735:c.*3109A>G,90624,+,,,,,GGTGCATACCACCATAACCAGCTTTAATTAA,TTAATTAAAGCTGGTTATGGTGGTATGCACC,A/G,GGTGCATACCACCATAACCAGCTTTAATTAA,TTAATTAAAGCTGGTTATGGTGGTATGCACC,+,,,A/G,,,A/G,GGTGCATACCACCATAACCAGCTTTAATTAA,NA,NA chr5:130539816_A/G,120,164,186,144,207,117,279,245,235,216,199,233,14,29,23,16,19,23,0,0,0,0,0,0,0.116666667,0.176829268,0.123655914,0.111111111,0.09178744,0.196581197,0,0,0,0,0,0,1,0,chr5,130539816,A/G,3,3,0,0,LYRM7,.,UTR3,.,.,NM_181705:c.*4522A>G\x3bNM_001293735:c.*4563A>G,90624,+,,,,,TTTTTTTTAGAGACAAGATCTCTCCGTGTTG,CAACACGGAGAGATCTTGTCTCTAAAAAAAA,A/G,TTTTTTTTAGAGACAAGATCTCTCCGTGTTG,CAACACGGAGAGATCTTGTCTCTAAAAAAAA,+,,,A/G,,,A/G,TTTTTTTTAGAGACAAGATCTCTCCGTGTTG,NA,NA chr5:130539846_A/G,127,180,208,158,225,125,299,272,249,218,224,261,10,19,25,15,22,14,0,0,0,0,0,0,0.078740157,0.105555556,0.120192308,0.094936709,0.097777778,0.112,0,0,0,0,0,0,1,0,chr5,130539846,A/G,3,3,0,0,LYRM7,.,UTR3,.,.,NM_181705:c.*4552A>G\x3bNM_001293735:c.*4593A>G,90624,+,,,,,GTCTAGGCTGGACTCAAACTTCTGGACTCAA,TTGAGTCCAGAAGTTTGAGTCCAGCCTAGAC,A/G,GTCTAGGCTGGACTCAAACTTCTGGACTCAA,TTGAGTCCAGAAGTTTGAGTCCAGCCTAGAC,+,,,A/G,,,A/G,GTCTAGGCTGGACTCAAACTTCTGGACTCAA,NA,NA chr5:130539895_A/G,112,169,210,166,208,121,286,250,261,200,190,255,6,11,17,12,18,19,0,0,0,0,0,0,0.053571429,0.065088757,0.080952381,0.072289157,0.086538462,0.157024793,0,0,0,0,0,0,1,0,chr5,130539895,A/G,3,3,0,0,LYRM7,.,UTR3,.,.,NM_181705:c.*4601A>G\x3bNM_001293735:c.*4642A>G,90624,+,,,,,TTAATAGCTGAGAGTAGAGACTTGAGCCACC,GGTGGCTCAAGTCTCTACTCTCAGCTATTAA,A/G,TTAATAGCTGAGAGTAGAGACTTGAGCCACC,GGTGGCTCAAGTCTCTACTCTCAGCTATTAA,+,,,A/G,,,A/G,TTAATAGCTGAGAGTAGAGACTTGAGCCACC,NA,NA chr5:133738270_T/C,170,148,153,169,150,91,221,225,145,251,230,215,36,22,23,30,19,27,0,0,0,0,0,0,0.211764706,0.148648649,0.150326797,0.177514793,0.126666667,0.296703297,0,0,0,0,0,0,1,1,chr5,133738270,T/C,3,3,0,0,CDKN2AIPNL,.,UTR3,.,.,NM_080656:c.*336A>G,91368,-,AluJo,+,AluJo,+,AGCCAATACTGCACCTTTGTGCTTCTGCCTG,CAGGCAGAAGCACAAAGGTGCAGTATTGGCT,T/C,AGCCAATACTGCACCTTTGTGCTTCTGCCTG,CAGGCAGAAGCACAAAGGTGCAGTATTGGCT,-,+,+,A/G,T/C,T/C,A/G,CAGGCAGAAGCACAAAGGTGCAGTATTGGCT,NA,NA chr5:150647737_A/G,93,93,103,105,92,76,171,170,124,160,182,136,13,12,11,8,6,17,0,0,0,0,0,0,0.139784946,0.129032258,0.106796117,0.076190476,0.065217391,0.223684211,0,0,0,0,0,0,1,1,chr5,150647737,A/G,3,3,0,0,GM2A,.,UTR3,.,.,NM_000405:c.*725A>G\x3bNM_001167607:c.*536A>G,2760,+,AluSc,-,AluSc,-,CTTTTTTTTTTTTTGAGACAGAATCTCACTT,AAGTGAGATTCTGTCTCAAAAAAAAAAAAAG,A/G,CTTTTTTTTTTTTTGAGACAGAATCTCACTT,AAGTGAGATTCTGTCTCAAAAAAAAAAAAAG,+,-,-,A/G,T/C,T/C,A/G,CTTTTTTTTTTTTTGAGACAGAATCTCACTT,NA,NA chr5:150647744_A/G,93,92,99,101,86,77,171,172,123,159,179,143,36,39,35,44,27,48,0,0,0,0,0,0,0.387096774,0.423913043,0.353535354,0.435643564,0.313953488,0.623376623,0,0,0,0,0,0,1,1,chr5,150647744,A/G,3,3,0,0,GM2A,.,UTR3,.,.,NM_000405:c.*732A>G\x3bNM_001167607:c.*543A>G,2760,+,AluSc,-,AluSc,-,TTTTTTTGAGACAGAATCTCACTTTGTCACC,GGTGACAAAGTGAGATTCTGTCTCAAAAAAA,A/G,TTTTTTTGAGACAGAATCTCACTTTGTCACC,GGTGACAAAGTGAGATTCTGTCTCAAAAAAA,+,-,-,A/G,T/C,T/C,A/G,TTTTTTTGAGACAGAATCTCACTTTGTCACC,NA,NA chr5:37288739_T/C,121,136,138,115,98,78,167,198,158,159,179,197,24,25,15,15,15,8,0,0,0,0,0,0,0.198347107,0.183823529,0.108695652,0.130434783,0.153061224,0.102564103,0,0,0,0,0,0,1,0,chr5,37288739,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d37991\x3bdist\x3d2996,105374727;9631,-,,,,,AGGCATGGTGGCTCATGCCTATAATCCCAGC,GCTGGGATTATAGGCATGAGCCACCATGCCT,T/C,AGGCATGGTGGCTCATGCCTATAATCCCAGC,GCTGGGATTATAGGCATGAGCCACCATGCCT,-,,,A/G,,,A/G,GCTGGGATTATAGGCATGAGCCACCATGCCT,-37991,+2996 chr5:37288767_T/C,88,116,111,83,70,53,124,157,116,124,147,154,26,28,20,13,12,10,0,0,0,0,0,0,0.295454545,0.24137931,0.18018018,0.156626506,0.171428571,0.188679245,0,0,0,0,0,0,1,0,chr5,37288767,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d38019\x3bdist\x3d2968,105374727;9631,-,,,,,AGCACTTTGGGAGACTGAGGCAGGGGAATCA,TGATTCCCCTGCCTCAGTCTCCCAAAGTGCT,T/C,AGCACTTTGGGAGACTGAGGCAGGGGAATCA,TGATTCCCCTGCCTCAGTCTCCCAAAGTGCT,-,,,A/G,,,A/G,TGATTCCCCTGCCTCAGTCTCCCAAAGTGCT,-38019,+2968 chr5:37289221_T/C,161,157,176,163,186,146,230,259,141,240,192,219,35,20,14,20,21,24,0,0,0,0,0,0,0.217391304,0.127388535,0.079545455,0.122699387,0.112903226,0.164383562,0,0,0,0,0,0,1,1,chr5,37289221,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d38473\x3bdist\x3d2514,105374727;9631,-,AluJr,+,AluJr,+,CATTGCACTCCAGCCTGGGCAACAAGAGCAA,TTGCTCTTGTTGCCCAGGCTGGAGTGCAATG,T/C,CATTGCACTCCAGCCTGGGCAACAAGAGCAA,TTGCTCTTGTTGCCCAGGCTGGAGTGCAATG,-,+,+,A/G,T/C,T/C,A/G,TTGCTCTTGTTGCCCAGGCTGGAGTGCAATG,-38473,+2514 chr5:37290335_T/C,397,396,373,411,351,282,348,393,358,389,412,494,115,102,104,99,76,61,0,0,0,0,0,0,0.289672544,0.257575758,0.278820375,0.240875912,0.216524217,0.216312057,0,0,0,0,0,0,1,1,chr5,37290335,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d39587\x3bdist\x3d1400,105374727;9631,-,AluSz,+,AluSz,+,CTGTAATCTCAACACTTTGGGAGGTGGAGGC,GCCTCCACCTCCCAAAGTGTTGAGATTACAG,T/C,CTGTAATCTCAACACTTTGGGAGGTGGAGGC,GCCTCCACCTCCCAAAGTGTTGAGATTACAG,-,+,+,A/G,T/C,T/C,A/G,GCCTCCACCTCCCAAAGTGTTGAGATTACAG,-39587,+1400 chr5:37290336_T/C,395,394,373,413,353,280,348,392,358,389,412,494,91,103,81,100,81,80,0,0,0,0,0,0,0.230379747,0.26142132,0.217158177,0.242130751,0.229461756,0.285714286,0,0,0,0,0,0,1,1,chr5,37290336,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d39588\x3bdist\x3d1399,105374727;9631,-,AluSz,+,AluSz,+,TGTAATCTCAACACTTTGGGAGGTGGAGGCG,CGCCTCCACCTCCCAAAGTGTTGAGATTACA,T/C,TGTAATCTCAACACTTTGGGAGGTGGAGGCG,CGCCTCCACCTCCCAAAGTGTTGAGATTACA,-,+,+,A/G,T/C,T/C,A/G,CGCCTCCACCTCCCAAAGTGTTGAGATTACA,-39588,+1399 chr5:37290554_T/C,150,136,133,228,160,116,204,202,118,237,328,278,38,31,19,72,20,38,0,0,0,0,0,0,0.253333333,0.227941176,0.142857143,0.315789474,0.125,0.327586207,0,0,0,0,0,0,1,1,chr5,37290554,T/C,3,3,0,0,LOC105374727;NUP155,.,intergenic,.,.,dist\x3d39806\x3bdist\x3d1181,105374727;9631,-,AluSz,+,AluSz,+,CACTGCACTCCAGGCTGGGCTACAGGGTGAG,CTCACCCTGTAGCCCAGCCTGGAGTGCAGTG,T/C,CACTGCACTCCAGGCTGGGCTACAGGGTGAG,CTCACCCTGTAGCCCAGCCTGGAGTGCAGTG,-,+,+,A/G,T/C,T/C,A/G,CTCACCCTGTAGCCCAGCCTGGAGTGCAGTG,-39806,+1181 chr5:44816570_A/G,87,95,55,113,108,79,99,136,146,124,110,160,16,26,18,24,20,18,0,0,0,0,0,0,0.183908046,0.273684211,0.327272727,0.212389381,0.185185185,0.227848101,0,0,0,0,0,0,1,1,chr5,44816570,A/G,3,3,0,0,MRPS30,.,downstream,.,.,dist\x3d952,10884,+,AluSp,-,AluSp,-,CACCTCGGCCTCCCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGGGAGGCCGAGGTG,A/G,CACCTCGGCCTCCCAAAGTGCTGGGATTACA,TGTAATCCCAGCACTTTGGGAGGCCGAGGTG,+,-,-,A/G,T/C,T/C,A/G,CACCTCGGCCTCCCAAAGTGCTGGGATTACA,+952,NA chr5:44816571_A/G,88,95,54,112,110,79,99,136,146,123,110,160,25,23,18,30,35,30,0,0,0,0,0,0,0.284090909,0.242105263,0.333333333,0.267857143,0.318181818,0.379746835,0,0,0,0,0,0,1,1,chr5,44816571,A/G,3,3,0,0,MRPS30,.,downstream,.,.,dist\x3d953,10884,+,AluSp,-,AluSp,-,ACCTCGGCCTCCCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGGGAGGCCGAGGT,A/G,ACCTCGGCCTCCCAAAGTGCTGGGATTACAG,CTGTAATCCCAGCACTTTGGGAGGCCGAGGT,+,-,-,A/G,T/C,T/C,A/G,ACCTCGGCCTCCCAAAGTGCTGGGATTACAG,+953,NA chr5:44816583_A/G,83,96,55,114,104,73,100,124,126,112,98,140,38,49,28,46,51,36,0,0,0,0,0,0,0.457831325,0.510416667,0.509090909,0.403508772,0.490384615,0.493150685,0,0,0,0,0,0,1,1,chr5,44816583,A/G,3,3,0,0,MRPS30,.,downstream,.,.,dist\x3d965,10884,+,AluSp,-,AluSp,-,CAAAGTGCTGGGATTACAGGTGTGAGCCACT,AGTGGCTCACACCTGTAATCCCAGCACTTTG,A/G,CAAAGTGCTGGGATTACAGGTGTGAGCCACT,AGTGGCTCACACCTGTAATCCCAGCACTTTG,+,-,-,A/G,T/C,T/C,A/G,CAAAGTGCTGGGATTACAGGTGTGAGCCACT,+965,NA chr5:79923397_T/C,741,731,886,779,908,641,1465,1457,1219,1386,1177,1478,37,63,68,68,50,114,0,0,0,0,0,0,0.049932524,0.086183311,0.076749436,0.087291399,0.055066079,0.177847114,0,0,0,0,0,0,1,1,chr5,79923397,T/C,3,3,0,0,DHFR,.,UTR3,.,.,NM_000791:c.*1509A>G\x3bNM_001290354:c.*1509A>G\x3bNM_001290357:c.*1567A>G,1719,-,AluJb,-,AluJb,-,CTCAAGTGATCTGCCTGCCTTAGCCTCCCAA,TTGGGAGGCTAAGGCAGGCAGATCACTTGAG,T/C,CTCAAGTGATCTGCCTGCCTTAGCCTCCCAA,TTGGGAGGCTAAGGCAGGCAGATCACTTGAG,-,-,-,A/G,A/G,A/G,A/G,TTGGGAGGCTAAGGCAGGCAGATCACTTGAG,NA,NA chr5:79923778_T/C,511,480,443,591,511,403,861,908,901,778,752,919,66,67,43,57,39,56,0,0,0,0,0,0,0.129158513,0.139583333,0.097065463,0.096446701,0.076320939,0.138957816,0,0,0,0,0,0,1,1,chr5,79923778,T/C,3,3,0,0,DHFR,.,UTR3,.,.,NM_000791:c.*1128A>G\x3bNM_001290354:c.*1128A>G\x3bNM_001290357:c.*1186A>G,1719,-,AluSq2,+,AluSq2,+,CGGTAATCCCAGCACTTTGGGAGGCTGAGGT,ACCTCAGCCTCCCAAAGTGCTGGGATTACCG,T/C,CGGTAATCCCAGCACTTTGGGAGGCTGAGGT,ACCTCAGCCTCCCAAAGTGCTGGGATTACCG,-,+,+,A/G,T/C,T/C,A/G,ACCTCAGCCTCCCAAAGTGCTGGGATTACCG,NA,NA chr5:79923793_T/C,450,427,501,556,503,438,1079,1101,1084,915,891,1113,90,95,60,96,51,109,0,0,0,0,0,0,0.2,0.222482436,0.119760479,0.172661871,0.10139165,0.248858447,0,0,0,0,0,0,1,1,chr5,79923793,T/C,3,3,0,0,DHFR,.,UTR3,.,.,NM_000791:c.*1113A>G\x3bNM_001290354:c.*1113A>G\x3bNM_001290357:c.*1171A>G,1719,-,AluSq2,+,AluSq2,+,TTTGGGAGGCTGAGGTGGGTGAATCGCTTGC,GCAAGCGATTCACCCACCTCAGCCTCCCAAA,T/C,TTTGGGAGGCTGAGGTGGGTGAATCGCTTGC,GCAAGCGATTCACCCACCTCAGCCTCCCAAA,-,+,+,A/G,T/C,T/C,A/G,GCAAGCGATTCACCCACCTCAGCCTCCCAAA,NA,NA chr6:119499517_T/C,134,134,169,130,115,117,180,158,129,128,110,146,14,11,13,16,17,35,0,0,0,0,0,0,0.104477612,0.082089552,0.076923077,0.123076923,0.147826087,0.299145299,0,0,0,0,0,0,1,0,chr6,119499517,T/C,3,3,0,0,MAN1A1,.,UTR3,.,.,NM_005907:c.*1467A>G,4121,-,,,,,TCATATGTTTCAGCCTAATCCATGGGGTTGT,ACAACCCCATGGATTAGGCTGAAACATATGA,T/C,TCATATGTTTCAGCCTAATCCATGGGGTTGT,ACAACCCCATGGATTAGGCTGAAACATATGA,-,,,A/G,,,A/G,ACAACCCCATGGATTAGGCTGAAACATATGA,NA,NA chr6:160100882_T/C,140,137,148,134,124,111,205,186,152,183,150,171,46,39,38,33,29,40,0,0,0,0,0,0,0.328571429,0.284671533,0.256756757,0.246268657,0.233870968,0.36036036,0,0,0,0,0,0,1,1,chr6,160100882,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*2643A>G\x3bNM_001322814:c.*2643A>G\x3bNM_001322820:c.*2643A>G\x3bNM_000636:c.*2643A>G\x3bNM_001322815:c.*2643A>G,6648,-,AluSz,-,AluSz,-,TGGCCACGCTGGTCTTGAACTCCTTCAAGTG,CACTTGAAGGAGTTCAAGACCAGCGTGGCCA,T/C,TGGCCACGCTGGTCTTGAACTCCTTCAAGTG,CACTTGAAGGAGTTCAAGACCAGCGTGGCCA,-,-,-,A/G,A/G,A/G,A/G,CACTTGAAGGAGTTCAAGACCAGCGTGGCCA,NA,NA chr6:160100910_T/C,93,84,84,87,81,75,130,130,87,116,95,109,27,19,18,18,11,20,0,0,0,0,0,0,0.290322581,0.226190476,0.214285714,0.206896552,0.135802469,0.266666667,0,0,0,0,0,0,1,1,chr6,160100910,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*2615A>G\x3bNM_001322814:c.*2615A>G\x3bNM_001322820:c.*2615A>G\x3bNM_000636:c.*2615A>G\x3bNM_001322815:c.*2615A>G,6648,-,AluSz,-,AluSz,-,GTGTTCTGCCTGCCTTGGCCTCCCAAAGTGC,GCACTTTGGGAGGCCAAGGCAGGCAGAACAC,T/C,GTGTTCTGCCTGCCTTGGCCTCCCAAAGTGC,GCACTTTGGGAGGCCAAGGCAGGCAGAACAC,-,-,-,A/G,A/G,A/G,A/G,GCACTTTGGGAGGCCAAGGCAGGCAGAACAC,NA,NA chr6:160100932_T/C,89,90,80,82,93,71,122,128,74,108,87,106,15,16,13,13,7,12,0,0,0,0,0,0,0.168539326,0.177777778,0.1625,0.158536585,0.075268817,0.169014085,0,0,0,0,0,0,1,1,chr6,160100932,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*2593A>G\x3bNM_001322814:c.*2593A>G\x3bNM_001322820:c.*2593A>G\x3bNM_000636:c.*2593A>G\x3bNM_001322815:c.*2593A>G,6648,-,AluSz,-,AluSz,-,CCAAAGTGCTGGGATTACAGATGTGAGTCAC,GTGACTCACATCTGTAATCCCAGCACTTTGG,T/C,CCAAAGTGCTGGGATTACAGATGTGAGTCAC,GTGACTCACATCTGTAATCCCAGCACTTTGG,-,-,-,A/G,A/G,A/G,A/G,GTGACTCACATCTGTAATCCCAGCACTTTGG,NA,NA chr6:160101723_T/C,98,102,81,115,86,67,169,148,94,140,124,129,32,29,23,33,12,27,0,0,0,0,0,0,0.326530612,0.284313725,0.283950617,0.286956522,0.139534884,0.402985075,0,0,0,0,0,0,1,1,chr6,160101723,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*1802A>G\x3bNM_001322814:c.*1802A>G\x3bNM_001322820:c.*1802A>G\x3bNM_000636:c.*1802A>G\x3bNM_001322815:c.*1802A>G,6648,-,AluSz,+,AluSz,+,CTGTAATCCCAGCACTTTGGGAGGCTGAGCC,GGCTCAGCCTCCCAAAGTGCTGGGATTACAG,T/C,CTGTAATCCCAGCACTTTGGGAGGCTGAGCC,GGCTCAGCCTCCCAAAGTGCTGGGATTACAG,-,+,+,A/G,T/C,T/C,A/G,GGCTCAGCCTCCCAAAGTGCTGGGATTACAG,NA,NA chr6:160101724_T/C,102,103,83,116,87,68,168,148,91,140,121,129,21,12,9,11,5,15,0,0,0,0,0,0,0.205882353,0.116504854,0.108433735,0.094827586,0.057471264,0.220588235,0,0,0,0,0,0,1,1,chr6,160101724,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*1801A>G\x3bNM_001322814:c.*1801A>G\x3bNM_001322820:c.*1801A>G\x3bNM_000636:c.*1801A>G\x3bNM_001322815:c.*1801A>G,6648,-,AluSz,+,AluSz,+,TGTAATCCCAGCACTTTGGGAGGCTGAGCCA,TGGCTCAGCCTCCCAAAGTGCTGGGATTACA,T/C,TGTAATCCCAGCACTTTGGGAGGCTGAGCCA,TGGCTCAGCCTCCCAAAGTGCTGGGATTACA,-,+,+,A/G,T/C,T/C,A/G,TGGCTCAGCCTCCCAAAGTGCTGGGATTACA,NA,NA chr6:160101733_T/C,97,99,84,103,89,68,157,139,96,132,120,127,44,37,26,40,14,25,0,0,0,0,0,0,0.453608247,0.373737374,0.30952381,0.388349515,0.157303371,0.367647059,0,0,0,0,0,0,1,1,chr6,160101733,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*1792A>G\x3bNM_001322814:c.*1792A>G\x3bNM_001322820:c.*1792A>G\x3bNM_000636:c.*1792A>G\x3bNM_001322815:c.*1792A>G,6648,-,AluSz,+,AluSz,+,AGCACTTTGGGAGGCTGAGCCAGACGGATCA,TGATCCGTCTGGCTCAGCCTCCCAAAGTGCT,T/C,AGCACTTTGGGAGGCTGAGCCAGACGGATCA,TGATCCGTCTGGCTCAGCCTCCCAAAGTGCT,-,+,+,A/G,T/C,T/C,A/G,TGATCCGTCTGGCTCAGCCTCCCAAAGTGCT,NA,NA chr6:160101805_T/C,106,90,101,101,96,67,184,125,93,131,133,125,16,10,7,16,6,11,0,0,0,0,0,0,0.150943396,0.111111111,0.069306931,0.158415842,0.0625,0.164179104,0,0,0,0,0,0,1,1,chr6,160101805,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*1720A>G\x3bNM_001322814:c.*1720A>G\x3bNM_001322820:c.*1720A>G\x3bNM_000636:c.*1720A>G\x3bNM_001322815:c.*1720A>G,6648,-,AluSz,+,AluSz,+,AAACCCTGTCTCTGCTAAAAATACAAAAAGT,ACTTTTTGTATTTTTAGCAGAGACAGGGTTT,T/C,AAACCCTGTCTCTGCTAAAAATACAAAAAGT,ACTTTTTGTATTTTTAGCAGAGACAGGGTTT,-,+,+,A/G,T/C,T/C,A/G,ACTTTTTGTATTTTTAGCAGAGACAGGGTTT,NA,NA chr6:160101811_T/C,104,90,104,103,99,68,188,131,100,138,136,129,11,14,12,19,12,19,0,0,0,0,0,0,0.105769231,0.155555556,0.115384615,0.184466019,0.121212121,0.279411765,0,0,0,0,0,0,1,1,chr6,160101811,T/C,3,3,0,0,SOD2,.,UTR3,.,.,NM_001322819:c.*1714A>G\x3bNM_001322814:c.*1714A>G\x3bNM_001322820:c.*1714A>G\x3bNM_000636:c.*1714A>G\x3bNM_001322815:c.*1714A>G,6648,-,AluSz,+,AluSz,+,TGTCTCTGCTAAAAATACAAAAAGTAGCCAG,CTGGCTACTTTTTGTATTTTTAGCAGAGACA,T/C,TGTCTCTGCTAAAAATACAAAAAGTAGCCAG,CTGGCTACTTTTTGTATTTTTAGCAGAGACA,-,+,+,A/G,T/C,T/C,A/G,CTGGCTACTTTTTGTATTTTTAGCAGAGACA,NA,NA chr7:127945595_T/C,86,93,108,104,106,52,135,170,122,125,134,118,8,6,8,14,8,5,0,0,0,0,0,0,0.093023256,0.064516129,0.074074074,0.134615385,0.075471698,0.096153846,0,0,0,0,0,0,1,0,chr7,127945595,T/C,3,3,0,0,MGC27345,.,ncRNA_exonic,.,.,.,157247,-,,,,,TGCCCAGGCTAGTCCTGAACTCCTGGGCTCA,TGAGCCCAGGAGTTCAGGACTAGCCTGGGCA,T/C,TGCCCAGGCTAGTCCTGAACTCCTGGGCTCA,TGAGCCCAGGAGTTCAGGACTAGCCTGGGCA,-,,,A/G,,,A/G,TGAGCCCAGGAGTTCAGGACTAGCCTGGGCA,NA,NA chr7:138732191_T/C,91,98,105,115,95,89,148,141,109,91,103,114,20,14,12,10,10,19,0,0,0,0,0,0,0.21978022,0.142857143,0.114285714,0.086956522,0.105263158,0.213483146,0,0,0,0,0,0,1,0,chr7,138732191,T/C,3,3,0,0,ZC3HAV1,.,UTR3,.,.,NM_020119:c.*149A>G,56829,-,,,,,CCTCCCAGATGATTCTAATATGTAGCAAAAT,ATTTTGCTACATATTAGAATCATCTGGGAGG,T/C,CCTCCCAGATGATTCTAATATGTAGCAAAAT,ATTTTGCTACATATTAGAATCATCTGGGAGG,-,,,A/G,,,A/G,ATTTTGCTACATATTAGAATCATCTGGGAGG,NA,NA chr7:38764465_T/C,125,110,136,119,129,91,167,177,166,123,174,162,17,12,11,15,9,13,0,0,0,0,0,0,0.136,0.109090909,0.080882353,0.12605042,0.069767442,0.142857143,0,0,0,0,0,0,1,1,chr7,38764465,T/C,3,3,0,0,VPS41,.,UTR3,.,.,NM_080631:c.*1381A>G\x3bNM_014396:c.*1381A>G,27072,-,AluSp,-,AluSp,-,CCAAAGCCCTGGGATTACGGGCGTGAGCCAC,GTGGCTCACGCCCGTAATCCCAGGGCTTTGG,T/C,CCAAAGCCCTGGGATTACGGGCGTGAGCCAC,GTGGCTCACGCCCGTAATCCCAGGGCTTTGG,-,-,-,A/G,A/G,A/G,A/G,GTGGCTCACGCCCGTAATCCCAGGGCTTTGG,NA,NA chr7:44842099_A/G,192,221,195,246,177,106,259,300,156,260,207,238,50,69,50,58,34,31,0,0,0,0,0,0,0.260416667,0.312217195,0.256410256,0.235772358,0.192090395,0.29245283,0,0,0,0,0,0,0,0,chr7,44842099,A/G,3,3,0,0,PPIA,.,UTR3,.,.,NM_021130:c.*1078A>G\x3bNM_001300981:c.*1078A>G,5478,+,,,,,GATGTTCTTGAGGGAAGCATATTGGGCTTTA,TAAAGCCCAATATGCTTCCCTCAAGAACATC,A/G,GATGTTCTTGAGGGAAGCATATTGGGCTTTA,TAAAGCCCAATATGCTTCCCTCAAGAACATC,+,,,A/G,,,A/G,GATGTTCTTGAGGGAAGCATATTGGGCTTTA,NA,NA chr8:42883363_A/G,73,74,76,60,52,53,75,105,68,79,73,79,17,19,16,11,10,17,0,0,0,0,0,0,0.232876712,0.256756757,0.210526316,0.183333333,0.192307692,0.320754717,0,0,0,0,0,0,1,1,chr8,42883363,A/G,3,3,0,0,HOOK3,.,UTR3,.,.,NM_032410:c.*9722A>G,84376,+,AluJb,+,AluJb,+,TTAGCTGGGCATGGTAGCTCATGCCTGTAGT,ACTACAGGCATGAGCTACCATGCCCAGCTAA,A/G,TTAGCTGGGCATGGTAGCTCATGCCTGTAGT,ACTACAGGCATGAGCTACCATGCCCAGCTAA,+,+,+,A/G,A/G,A/G,A/G,TTAGCTGGGCATGGTAGCTCATGCCTGTAGT,NA,NA chr8:42979743_A/G,483,522,436,455,361,433,599,611,649,603,632,616,55,39,30,43,20,83,0,0,0,0,0,0,0.113871636,0.074712644,0.068807339,0.094505495,0.055401662,0.191685912,0,0,0,0,0,0,1,0,chr8,42979743,A/G,3,3,0,0,POMK;HGSNAT,.,intergenic,.,.,dist\x3d1420\x3bdist\x3d15849,84197;138050,+;+,,,,,CAGACCCAGCTGATAACATTCAAAAACTGGG,CCCAGTTTTTGAATGTTATCAGCTGGGTCTG,A/G,CAGACCCAGCTGATAACATTCAAAAACTGGG,CCCAGTTTTTGAATGTTATCAGCTGGGTCTG,+;+,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+1420,-15849 chr9:133997877_A/G,108,99,143,200,123,165,210,199,89,164,180,149,24,8,34,48,15,63,0,0,0,0,0,0,0.222222222,0.080808081,0.237762238,0.24,0.12195122,0.381818182,0,0,0,0,0,0,0,0,chr9,133997877,A/G,3,3,0,0,AIF1L,.,UTR3,.,.,NM_001185095:c.*2168A>G\x3bNM_001185096:c.*2241A>G\x3bNM_031426:c.*2168A>G,83543,+,,,,,TTTTTTTTTTCCCCAAGATCATTAGATGTCC,GGACATCTAATGATCTTGGGGAAAAAAAAAA,A/G,TTTTTTTTTTCCCCAAGATCATTAGATGTCC,GGACATCTAATGATCTTGGGGAAAAAAAAAA,+,,,A/G,,,A/G,TTTTTTTTTTCCCCAAGATCATTAGATGTCC,NA,NA chr9:36216950_T/C,56,69,63,132,64,69,149,181,130,111,117,117,5,7,9,9,6,15,0,0,0,0,0,0,0.089285714,0.101449275,0.142857143,0.068181818,0.09375,0.217391304,0,0,0,0,0,0,1,1,chr9,36216950,T/C,3,3,0,0,GNE,.,UTR3,.,.,NM_001190383:c.*412A>G\x3bNM_001128227:c.*412A>G\x3bNM_001190388:c.*412A>G\x3bNM_001190384:c.*412A>G\x3bNM_005476:c.*412A>G,10020,-,AluY,-,AluY,-,CTGGGATTACAGGCGTGAGCCACTGTGCCCG,CGGGCACAGTGGCTCACGCCTGTAATCCCAG,T/C,CTGGGATTACAGGCGTGAGCCACTGTGCCCG,CGGGCACAGTGGCTCACGCCTGTAATCCCAG,-,-,-,A/G,A/G,A/G,A/G,CGGGCACAGTGGCTCACGCCTGTAATCCCAG,NA,NA chr9:80887203_A/G,63,110,78,84,77,63,88,133,120,92,102,125,7,18,8,11,3,10,0,0,0,0,0,0,0.111111111,0.163636364,0.102564103,0.130952381,0.038961039,0.158730159,0,0,0,0,0,0,1,1,chr9,80887203,A/G,3,3,0,0,CEP78,.,UTR3,.,.,NM_001349840:c.*1436A>G\x3bNM_001349839:c.*1436A>G\x3bNM_001330691:c.*1436A>G\x3bNM_001330693:c.*1436A>G,84131,+,AluJb,-,AluJb,-,CACCTTGGCCTCCCAAAGTGCTGAGACTACA,TGTAGTCTCAGCACTTTGGGAGGCCAAGGTG,A/G,CACCTTGGCCTCCCAAAGTGCTGAGACTACA,TGTAGTCTCAGCACTTTGGGAGGCCAAGGTG,+,-,-,A/G,T/C,T/C,A/G,CACCTTGGCCTCCCAAAGTGCTGAGACTACA,NA,NA chr9:80887204_A/G,63,110,78,86,75,63,88,132,121,93,102,125,16,29,21,32,17,22,0,0,0,0,0,0,0.253968254,0.263636364,0.269230769,0.372093023,0.226666667,0.349206349,0,0,0,0,0,0,1,1,chr9,80887204,A/G,3,3,0,0,CEP78,.,UTR3,.,.,NM_001349840:c.*1437A>G\x3bNM_001349839:c.*1437A>G\x3bNM_001330691:c.*1437A>G\x3bNM_001330693:c.*1437A>G,84131,+,AluJb,-,AluJb,-,ACCTTGGCCTCCCAAAGTGCTGAGACTACAG,CTGTAGTCTCAGCACTTTGGGAGGCCAAGGT,A/G,ACCTTGGCCTCCCAAAGTGCTGAGACTACAG,CTGTAGTCTCAGCACTTTGGGAGGCCAAGGT,+,-,-,A/G,T/C,T/C,A/G,ACCTTGGCCTCCCAAAGTGCTGAGACTACAG,NA,NA chr9:80887216_A/G,73,115,86,89,79,74,98,136,128,103,105,130,17,20,12,15,14,21,0,0,0,0,0,0,0.232876712,0.173913043,0.139534884,0.168539326,0.17721519,0.283783784,0,0,0,0,0,0,1,1,chr9,80887216,A/G,3,3,0,0,CEP78,.,UTR3,.,.,NM_001349840:c.*1449A>G\x3bNM_001349839:c.*1449A>G\x3bNM_001330691:c.*1449A>G\x3bNM_001330693:c.*1449A>G,84131,+,AluJb,-,AluJb,-,CAAAGTGCTGAGACTACAGACCTGAGCCACT,AGTGGCTCAGGTCTGTAGTCTCAGCACTTTG,A/G,CAAAGTGCTGAGACTACAGACCTGAGCCACT,AGTGGCTCAGGTCTGTAGTCTCAGCACTTTG,+,-,-,A/G,T/C,T/C,A/G,CAAAGTGCTGAGACTACAGACCTGAGCCACT,NA,NA chr9:80890766_A/G,260,306,310,374,254,190,462,494,481,435,445,449,31,51,28,49,22,28,0,0,0,0,0,0,0.119230769,0.166666667,0.090322581,0.131016043,0.086614173,0.147368421,0,0,0,0,0,0,1,1,chr9,80890766,A/G,3,3,0,0,CEP78,.,UTR3,.,.,NM_001349840:c.*4999A>G\x3bNM_001349839:c.*4999A>G\x3bNM_001330691:c.*4999A>G\x3bNM_001330693:c.*4999A>G,84131,+,AluJr,+,AluJr,+,CACTCAGGAGGCTGAAGTGGGAGGATCGCTT,AAGCGATCCTCCCACTTCAGCCTCCTGAGTG,A/G,CACTCAGGAGGCTGAAGTGGGAGGATCGCTT,AAGCGATCCTCCCACTTCAGCCTCCTGAGTG,+,+,+,A/G,A/G,A/G,A/G,CACTCAGGAGGCTGAAGTGGGAGGATCGCTT,NA,NA chr9:98645152_A/G,90,91,87,94,84,78,88,105,64,78,95,94,12,9,14,13,4,16,0,0,0,0,0,0,0.133333333,0.098901099,0.16091954,0.138297872,0.047619048,0.205128205,0,0,0,0,0,0,0,0,chr9,98645152,A/G,3,3,0,0,ERCC6L2,.,intronic,.,.,.,375748,+,,,,,TTACCTTCTTCGTTTATTCCACAAACTATCA,TGATAGTTTGTGGAATAAACGAAGAAGGTAA,A/G,TTACCTTCTTCGTTTATTCCACAAACTATCA,TGATAGTTTGTGGAATAAACGAAGAAGGTAA,+,,,A/G,,,A/G,TTACCTTCTTCGTTTATTCCACAAACTATCA,NA,NA chr9:99657281_T/C,53,58,76,62,50,85,68,52,53,54,56,65,4,6,14,9,3,15,0,0,0,0,0,0,0.075471698,0.103448276,0.184210526,0.14516129,0.06,0.176470588,0,0,0,0,0,0,1,1,chr9,99657281,T/C,3,3,0,0,LOC100132781;LOC441454,.,intergenic,.,.,dist\x3d22771\x3bdist\x3d14076,NA,NA,AluJo,-,AluJo,-,AAGGTGCTGGGATTATAGGTGTGAGCTACCA,TGGTAGCTCACACCTATAATCCCAGCACCTT,T/C,AAGGTGCTGGGATTATAGGTGTGAGCTACCA,TGGTAGCTCACACCTATAATCCCAGCACCTT,NA,-,-,,A/G,A/G,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+22771,-14076 chrX:123045381_A/G,103,88,122,127,133,111,160,162,163,157,141,134,5,9,12,11,19,15,0,0,0,0,0,0,0.048543689,0.102272727,0.098360656,0.086614173,0.142857143,0.135135135,0,0,0,0,0,0,1,1,chrX,123045381,A/G,3,3,0,0,XIAP,.,UTR3,.,.,NM_001204401:c.*4350A>G\x3bNM_001167:c.*4350A>G,331,+,AluJo,+,AluJo,+,GTCAATACAAATGTTAGCCAGGCGTGGTGGC,GCCACCACGCCTGGCTAACATTTGTATTGAC,A/G,GTCAATACAAATGTTAGCCAGGCGTGGTGGC,GCCACCACGCCTGGCTAACATTTGTATTGAC,+,+,+,A/G,A/G,A/G,A/G,GTCAATACAAATGTTAGCCAGGCGTGGTGGC,NA,NA chrX:123045407_A/G,176,154,140,151,155,118,193,188,186,179,167,158,0,0,12,16,11,20,0,0,0,0,0,0,0,0,0.085714286,0.105960265,0.070967742,0.169491525,0,0,0,0,0,0,1,1,chrX,123045407,A/G,1,3,0,0,XIAP,.,UTR3,.,.,NM_001204401:c.*4376A>G\x3bNM_001167:c.*4376A>G,331,+,AluJo,+,AluJo,+,GTGGCACATGCCCATAGTCGCAGCTACTCTG,CAGAGTAGCTGCGACTATGGGCATGTGCCAC,A/G,GTGGCACATGCCCATAGTCGCAGCTACTCTG,CAGAGTAGCTGCGACTATGGGCATGTGCCAC,+,+,+,A/G,A/G,A/G,A/G,GTGGCACATGCCCATAGTCGCAGCTACTCTG,NA,NA chrX:154353635_A/G,97,108,120,140,109,136,167,118,158,106,163,158,16,15,20,25,11,36,0,0,0,0,0,0,0.164948454,0.138888889,0.166666667,0.178571429,0.100917431,0.264705882,0,0,0,0,0,0,1,0,chrX,154353635,A/G,3,3,0,0,BRCC3;VBP1,.,intergenic,.,.,dist\x3d2286\x3bdist\x3d71649,79184;7411,+;+,,,,,TCTCAGAGCTGAGAAAGGTATGTGTATATGT,ACATATACACATACCTTTCTCAGCTCTGAGA,A/G,TCTCAGAGCTGAGAAAGGTATGTGTATATGT,ACATATACACATACCTTTCTCAGCTCTGAGA,+;+,,,,,,A/G,GTGGCTCACGCCTGTAATCCCAGCACTTTGG,+2286,-71649 chrX:54589774_A/G,149,154,129,166,124,143,163,186,149,172,223,240,40,43,31,48,28,54,0,0,0,0,0,0,0.268456376,0.279220779,0.240310078,0.289156627,0.225806452,0.377622378,0,0,0,0,0,0,0,0,chrX,54589774,A/G,3,3,0,0,GNL3L,.,UTR3,.,.,NM_001184819:c.*2739A>G\x3bNM_019067:c.*2739A>G,54552,+,,,,,TGTAATGTGCAAATTACGGGTTTATCAGGAG,CTCCTGATAAACCCGTAATTTGCACATTACA,A/G,TGTAATGTGCAAATTACGGGTTTATCAGGAG,CTCCTGATAAACCCGTAATTTGCACATTACA,+,,,A/G,,,A/G,TGTAATGTGCAAATTACGGGTTTATCAGGAG,NA,NA chrX:54589812_A/G,162,175,139,178,144,157,165,185,149,182,233,244,17,17,7,14,13,30,0,0,0,0,0,0,0.104938272,0.097142857,0.050359712,0.078651685,0.090277778,0.191082803,0,0,0,0,0,0,0,0,chrX,54589812,A/G,3,3,0,0,GNL3L,.,UTR3,.,.,NM_001184819:c.*2777A>G\x3bNM_019067:c.*2777A>G,54552,+,,,,,CATCGGTAATGGAGAAGTGCTGGGAGGTAAA,TTTACCTCCCAGCACTTCTCCATTACCGATG,A/G,CATCGGTAATGGAGAAGTGCTGGGAGGTAAA,TTTACCTCCCAGCACTTCTCCATTACCGATG,+,,,A/G,,,A/G,CATCGGTAATGGAGAAGTGCTGGGAGGTAAA,NA,NA