# hit_len: length of target size including the novel splicing events in bp # unique_targets_length: length of all possible targets based on the annotation # comment: validation status target_tx type strand forward_name reverse_name forward_seq reverse_seq forward_loc reverse_loc hit_len unique_targets_length comment IMMT-SL1 ES - IMMT-SL1_fwd_4 IMMT-SL1_rev_5 CTAAACAGCCTGCCTCACAA CAATAGCCTGCAGAGTGACAC 2:86173690-86173709:+ 2:86166582-86166602:+ 228 261;357;324;228 validated AIMP2-SL1 ES + AIMP2-SL1_fwd_3 AIMP2-SL1_rev_4 CTCCGTCGTGACCTCTGAC GAAGGTTTTCAGGCACGCTC 7:6009290-6009308:+ 7:6017948-6017967:+ 450 450;570;363 validated APMAP-SL1 ES - APMAP-SL1_fwd_1 APMAP-SL1_rev_2 TTTTATTGGACCAGCTGCGG GTCGCTGAGTTCTAGGACGA 20:24969603-24969622:+ 20:24963957-24963976:+ 163 163;356 validated C1orf105-SL1 ES + C1orf105-SL1_fwd_1 C1orf105-SL1_rev_3 TGACTCCATGCTGCTCAGAA CATCATGGAAAGGCTCAGGTG 1:172456432-172456451:+ 1:172465331-172465351:+ 111 111;179 validated HACD1-SL1 ES - HACD1-SL1_fwd_5 HACD1-SL1_rev_5 TTCCAGACATTTGCCTTGCTT GGTCAAGAAGGCTGAATGTGT 10:17603933-17603953:+ 10:17599318-17599338:+ 118 118;237 validated LGMN-SL1 ES - LGMN-SL1_fwd_5 LGMN-SL1_rev_2 CGGACCCACTGCTTCAACT CGCTCACACTTGGAAAAGCT 14:92706497-92706515:+ 14:92704283-92704302:+ 112 180;112 not validated MCM6-SL1 ES - MCM6-SL1_fwd_3 MCM6-SL1_rev_3 ATGGAGGTAGATGAGGGTGC GAGCCTTTCAATCCAGCCTG 2:135848067-135848086:+ 2:135840908-135840927:+ 218 218;78;374 validated NTRK2-SL1 ES + NTRK2-SL1_fwd_1 NTRK2-SL1_rev_1 GTGTGAATTAGGGACCGGGA GGGCGCAGATTCCTTGTTAG 9:84669372-84669391:+ 9:84670409-84670428:+ 104 104;313 validated PRDX5-SL1 ES + PRDX5-SL1_fwd_1 PRDX5-SL1_rev_1 AGCGGGCTATATACTCGTCG TAACACTCAGACAGGCCACC 11:64318251-64318270:+ 11:64320720-64320739:+ 215 215;350 not validated PRKRA-SL1 ES - PRKRA-SL1_fwd_1 PRKRA-SL1_rev_1 GAGGACAGTGGGACCTTCAG CAGCTCTATGTTTCGCCAGC 2:178450966-178450985:+ 2:178447548-178447567:+ 59 229;59 validated REEP1-SL1 ES - REEP1-SL1_fwd_3 REEP1-SL1_rev_4 CTTATCGGAGAGACTGCGGA GTCTTCCTCCTCGTCGTCAG 2:86232772-86232791:+ 2:86220027-86220046:+ 262 298;262 validated UQCRH-SL1 ES + UQCRH-SL1_fwd_2 UQCRH-SL1_rev_2 TGTTGCTGCTCGTGTTGAAT CCTCGCATGCAAGAAGTCAA 1:46303729-46303748:+ 1:46310288-46310307:+ 245 288;420;272;245 not validated YTHDF2-SL1 ES + YTHDF2-SL1_fwd_3 YTHDF2-SL1_rev_5 CCTTACTTGAGTCCACAGGCA TGCCTTTTATTTCCCACGACC 1:28738312-28738332:+ 1:28768938-28768958:+ 57 1641;57 validated ARGLU1-SL1 IR - ARGLU1-SL1_fwd_1 ARGLU1-SL1_rev_1 AACTCGAGCGACAGAGACAA TAGCTCCTCACGTTTTGCAC 13:106559462-106559481:+ 13:106557102-106557121:+ 2380 2380;80 not validated DHRS3-SL2 IR - DHRS3-SL2_fwd_4 DHRS3-SL2_rev_1 CGGACTGAGAAATGCCTGAAG CAGGGTGTTGATGTGTTGGG 1:12580631-12580651:+ 1:12579305-12579324:+ 1347 1347;237 not validated FHL1-SL1 IR + FHL1-SL1_fwd_3 FHL1-SL1_rev_4 CCTTGGCCAATGAGACCTTT TCACGCAGTAGAAGTCCTCC X:136207080-136207099:+ X:136207895-136207914:+ 835 234;835 not validated MYL7-SL2 IR - MYL7-SL2_fwd_3 MYL7-SL2_rev_1 GGCAGACCTGAGGGAGACC CCAAAGAGCGTGAGGAAGAC 7:44140725-44140743:+ 7:44140337-44140356:+ 407 123;407;213 validated RSRP1-SL1 IR - RSRP1-SL1_fwd_3 RSRP1-SL1_rev_2 AAATCATGAATGTGGTCTGCAGA GCTATGCTTCTTTGCTGGGT 1:25244476-25244498:+ 1:25243563-25243582:+ 936 936;389;707 validated SAT1-SL1 IR + SAT1-SL1_fwd_2 SAT1-SL1_rev_2 GGAGAGCACCCCTTTTACCA TTGCCAATCCACGGGTCATA X:23783820-23783839:+ X:23785366-23785385:+ 1566 122;232;1566 not validated WSB1-SL1 IR + WSB1-SL1_fwd_4 WSB1-SL1_rev_1 TGTTCAGTCGGAGCCAGTAA GGTGATGTCCTTCTAGTTTCCG 17:27306859-27306878:+ 17:27309136-27309157:+ 2299 1438;82;1091;2299 validated ARMCX2-SL1 NE - ARMCX2-SL1_fwd_2 ARMCX2-SL1_rev_1 CCAACTCTATTGCGCAGCTC TCCAGGACTGAAAAGACGGG X:101659819-101659838:+ X:101659088-101659107:+ 225 142;225;213;258;236 validated BRK1-SL1 NE + BRK1-SL1_fwd_3 BRK1-SL1_rev_5 GGCTAACCGGGAGTACATTG TGTGGCCTGTGTTGTGTAAAG 3:10115749-10115768:+ 3:10126325-10126345:+ 296 296;231 validated GATA6-AS1-SL3 NE - GATA6-AS1-SL3_fwd_1 GATA6-AS1-SL3_rev_2 ATGGGGTACGCAGAATGGAA TCTCCACCCCAGTTCAACTC 18:22168755-22168774:+ 18:22168117-22168136:+ 227 227;375 validated HIST1H2AC-SL2 NE + HIST1H2AC-SL2_fwd_1 HIST1H2AC-SL2_rev_2 CTCAACAAACTGCTAGGCCG AGTTTGGCAGGCACTTAGGA 6:26124512-26124531:+ 6:26138090-26138109:+ 242 294;178;358;242 validated KAT14-SL1 NE + KAT14-SL1_fwd_2 KAT14-SL1_rev_3 GTCTAGGAGCTCGAAGGTGG GCTGAGCAATCCGAACAAGTAA 20:18137958-18137977:+ 20:18145284-18145305:+ 879 879 not validated KLHL20-SL1 NE + KLHL20-SL1_fwd_1 KLHL20-SL1_rev_3 GTTGGATTCTCAGCAACGCA ACTTCTGTCTGACGGCTCTC 1:173637957-173637976:+ 1:173733996-173734015:+ 546 546;445 validated MAGED1-SL1 NE + MAGED1-SL1_fwd_1 MAGED1-SL1_rev_1 GTTGCTGCCTTCTTCGTCAA ATAGGCAGCATTTGGACCCT X:51803097-51803116:+ X:51895366-51895385:+ 681 681;435 not validated MTHFD2-SL1 NE + MTHFD2-SL1_fwd_3 MTHFD2-SL1_rev_4 TTCGCCCTTTCCACCTCG GTGACTTGCAGGATTCTCGC 2:74198715-74198732:+ 2:74205830-74205849:+ 271 271;173 not validated PPP1R12A-SL1 NE - PPP1R12A-SL1_fwd_2 PPP1R12A-SL1_rev_3 TGTGTCATCAGGTCAAGCAAC CTGGGACTTGAAGCTGAACG 12:79817416-79817436:+ 12:79809826-79809845:+ 345 228;345 validated PRSS35-SL1 NE + PRSS35-SL1_fwd_4 PRSS35-SL1_rev_4 CCTCGGGAGCTCTGATCTC CATTCGATGCCACACACTGT 6:83512638-83512656:+ 6:83523619-83523638:+ 379 379;274 validated SNRPN-SL3 NE + SNRPN-SL3_fwd_5 SNRPN-SL3_rev_2 GCTGCCCCTTTTACCAGTG CCTCTGGTACGTGCTGTTCT 15:24920085-24920103:+ 15:24962141-24962160:+ 203 261;203;87;162 validated TIMM17A-SL1 NE + TIMM17A-SL1_fwd_2 TIMM17A-SL1_rev_2 TAAAACCAGGGCTCCACAGT AGTATGGCTCCCGTTAAGGC 1:201957549-201957568:+ 1:201963714-201963733:+ 214 144;214 validated TUBG2-SL2 NE + TUBG2-SL2_fwd_4 TUBG2-SL2_rev_5 GACCGAGAAGCAGATGGAAG TCATTCAGTCGCTCCAGGA 17:42660675-42660694:+ 17:42663031-42663049:+ 137 110;137 not validated