Supplementary File 8. Log2 fold change of total RNA abundance for satDNAs and piRNA clusters in RDC and Moon mutants (data from (Mohn et al. 2014; Andersen et al. 2017)),,,,,,, ,,,,,,, protein,repeatID,baseMean,log2FoldChange,lfcSE,stat,pvalue,padj Cutoff,Rsp_SAT,151.029502,-0.988229361,0.875273224,-1.129052431,0.258875717,0.999618675 Cutoff,1pt688_SAT,2412.440831,-0.086780585,0.669691732,-0.129582883,0.896896447,0.999618675 Deadlock,Rsp_SAT,104.4074682,-1.32187933,0.920035244,-1.436770317,0.150783267,0.998380646 Deadlock,1pt688_SAT,1912.250259,0.295483588,0.67417396,0.438289826,0.6611762,0.998380646 Moonshiner,Rsp_SAT,94.4734666,-0.453020549,0.2585044,-1.752467459,0.079693461,0.490015989 Moonshiner,1pt688_SAT,2428.009188,-0.266223166,0.086167474,-3.089601591,0.002004251,0.022423505 Rhino,Rsp_SAT,136.451267,0.02566687,0.469555942,0.054662006,0.956407739,0.999536296 Rhino,1pt688_SAT,2278.064129,-0.194832272,0.240134598,-0.811346111,0.417166937,0.999536296 Cutoff,piRNA_cluster_38C2,520.6740901,-1.786200828,0.648528943,-2.754234561,0.005882959,0.321416885 Cutoff,piRNA_cluster_38C1,372.1774421,-1.659978493,0.646668392,-2.566970201,0.010259143,0.51438865 Cutoff,piRNA_cluster_42AB,6215.622593,-0.752318038,0.639282443,-1.176816362,0.239268811,0.999933933 Cutoff,piRNA_cluster_20A,21556.3689,0.710747643,0.633884972,1.121256496,0.262178698,0.999933933 Cutoff,piRNA_cluster_80F,8897.497403,0.422125053,0.64231907,0.65718904,0.511059372,0.999933933 Cutoff,piRNA_cluster_flamenco,1971.031374,-0.01202246,0.589593845,-0.020391088,0.983731393,0.999933933 Deadlock,piRNA_cluster_38C1,275.9890267,-1.405447559,0.656536853,-2.140698656,0.032298347,0.981706755 Deadlock,piRNA_cluster_38C2,391.4523675,-1.38170335,0.651420574,-2.121061883,0.033916595,0.982650436 Deadlock,piRNA_cluster_flamenco,1652.881597,0.555418667,0.581849167,0.954574997,0.339792666,0.998504371 Deadlock,piRNA_cluster_42AB,5846.75928,0.464278102,0.628977772,0.738147074,0.460425081,0.998504371 Deadlock,piRNA_cluster_20A,14092.82442,0.371094367,0.623885095,0.594812042,0.551969117,0.998504371 Deadlock,piRNA_cluster_80F,6269.81813,0.334042145,0.632687368,0.52797347,0.59751775,0.998504371 Moonshiner,piRNA_cluster_42AB,4070.520301,-0.827022404,0.040748204,-20.29592307,1.40E-91,6.42E-89 Moonshiner,piRNA_cluster_38C2,874.0102444,1.549946377,0.089852183,17.24995795,1.12E-66,2.57E-64 Moonshiner,piRNA_cluster_38C1,448.265537,1.669922474,0.125859739,13.26812282,3.54E-40,4.65E-38 Moonshiner,piRNA_cluster_20A,9184.660433,0.196953578,0.028631943,6.878805974,6.04E-12,2.82E-10 Moonshiner,piRNA_cluster_80F,3004.544068,-0.308161266,0.045896121,-6.714320553,1.89E-11,8.40E-10 Moonshiner,piRNA_cluster_flamenco,11330.2141,-0.094635978,0.026073145,-3.629634187,0.000283823,0.004884478 Rhino,piRNA_cluster_38C1,210.296383,-1.467834345,0.262567103,-5.590320823,2.27E-08,1.55E-06 Rhino,piRNA_cluster_38C2,371.3853736,-1.244826985,0.263737706,-4.719943167,2.36E-06,0.000123402 Rhino,piRNA_cluster_42AB,5087.680888,-0.300003619,0.258136852,-1.162188261,0.245159002,0.999860075 Rhino,piRNA_cluster_20A,11945.76158,0.26830092,0.257044569,1.043791433,0.296581896,0.999860075 Rhino,piRNA_cluster_flamenco,7934.237178,0.100869685,0.193667184,0.520840356,0.602477988,0.999860075 Rhino,piRNA_cluster_80F,4483.925894,-0.109049761,0.265024427,-0.411470602,0.680727493,0.999860075