,10X Version,Animal ID,Target # Cells,Recovered Cells,Typed Cells,Cell Ranger # Cells,Predicted Multiplets,Transcriptome Sequencing Depth,Transcriptome Reads/Cell,Median UMIs/Cell,Median Genes/Cell,Variants Recovered,Virus Sequencing Depth,Virus Reads/Cell,Age at Extraction (Days),Virus Incubation time (Days),Percent of Virus UMIs Determined
20170615_TC0,2,T0,7000,15046,14580,18041,2520,259521816,17248.55882,1103,662,Cell Typing Only,0,0,0,0,0
20170615_TC0_small,2,T0,800,2300,2221,2518,303,15895034,6910.884348,769,498,Cell Typing Only,0,0,0,0,0
20181127_TC1,2,62R,8450,6854,6575,7841,366,355946958,51932.73388,1952,1123,PHP.eB CAG_mNeonGreen_NLS;PHP.V1 CAG_mRuby2_NLS,1451304,211.74555,70,18,70.46599496
20181127_TC1_small,2,62R,845,728,696,1236,53,9715709,13345.75412,1645,969.5,Cell Typing Only,0,0,70,0,0
20190111_BC1,2,11L,10000,1801,1699,2431,20,284893999,158186.5625,1391,773,PHP.V1 CAG_mNeonGreen_NLS;PHP.eB CAG_mNeonGreen_NLS,7643006,4243.756802,73,14,58.07926829
20190112_LC1,2,XC1,10000,13802,13175,15372,779,389718571,28236.38393,1364,773,Cell Typing Only,0,0,65,0,0
20190319_TC2,3,1N,10000,6212,5941,12958,376,824944486,132798.5328,6604,2708,PHP.V1 CAG_tdTomato;PHP.eB CAG_mNeonGreen_NLS,14926860,2402.907276,77,16,73.84742042
20190321_BC2,3,4RL,10000,8674,8435,22584,1646,849484345,97934.55672,3377,1853,PHP.V1 CAG_mNeonGreen_NLS;PHP.eB CAG_mNeonGreen_NLS,12062084,1390.60226,79,18,77.00897536
20190321_BC2_small,3,4RL,1000,821,811,2517,88,15000924,18271.52741,1952,1202,Cell Typing Only,0,0,79,0,0
20190703_TC3,3,MA5N,10267,5972,5689,12273,272,601486578,100717.7793,6684,2649,Cell Typing Only,0,0,57,0,0
20190703_TC3_small,3,MA5N,1027,673,642,2100,22,20069558,29821.03715,4297,1925,Cell Typing Only,0,0,57,0,0
20190711_TC4,3,MA7L,10000,12451,11992,21053,839,597488132,47987.16023,2762,1244,CAP-B10 CAG_mNeonGreen_NLS,19518834,1567.651916,65,23,67.63918142
20190712_TC5,3,MA2R,10000,12049,11625,17176,1149,586323124,48661.55897,5760,2505,PHP.eB CAG_mNeonGreen_NLS;CAP-B10 CAG_tdTomato_NLS,3020620,250.6946635,66,24,59.62867534
20190713_TC6,3,MA4LR,10000,11317,10978,17436,1089,584377747,51637.16064,6374,2688,CAP-B10 CAG_mNeonGreen_NLS;PHP.eB CAG_tdTomato_NLS,7545370,666.7288151,67,25,60.70216067
20190713_TC7,3,MA6R,10000,11991,11623,17652,1697,614173437,51219.5344,6028,2597,PHP.eB CAG_mNeonGreen_NLS,1464207,122.1088316,67,25,68.7726382
20190807_LC2,3,MA13Ri,10000,18447,18049,27898,5327,461364252,25010.25923,3821,1895,Cell Typing Only,0,0,64,0,0
20190807_LC2_small,3,MA13Ri,1000,2186,2148,2936,420,15815430,7234.871912,1689.5,1033,Cell Typing Only,0,0,64,0,0
20191027_BC3,3,MA19R,10000,18140,17958,23983,3711,347556767,19159.68947,3014,1562,Cell Typing Only,0,0,66,0,0
20200720_BC4_1,3,MA29RR,10000,9629,9256,42008,3150,475256333,49356.76945,2441,1367,PHP.C2 UBC_mCherry;PHP.B UBC_mCherry;AAV9 UBC_mCherry;PHP.V1 UBC_mCherry;PHP.eB UBC_mCherry;PHP.C1 UBC_mCherry;CAP-B10 UBC_mCherry,59588394,6188.430159,66,21,70.52675585
20200720_BC4_1_small,3,MA29RR,1000,1984,1894,3489,489,14629656,7373.818548,1349.5,853,Cell Typing Only,0,0,66,0,0
20200720_BC4_2,3,MA29RR,10000,21084,20289,29258,5694,543326002,25769.58841,2926,1554,PHP.C2 UBC_mCherry;PHP.B UBC_mCherry;AAV9 UBC_mCherry;PHP.V1 UBC_mCherry;PHP.eB UBC_mCherry;PHP.C1 UBC_mCherry;CAP-B10 UBC_mCherry,68036776,3226.938721,66,21,70.44064607
20200807_C1,3,MA33RR,10000,16053,15608,18102,2100,392457991,24447.64162,1360,791,Cell Typing Only,0,0,52,0,0
20200907_C3,3,MA39N,10000,13710,13316,18837,2641,404767612,29523.53115,3848,1824,Saline Control,0,0,68,3,0
20200903_TC8,3,XC37RL,10000,12927,12747,16668,1943,381078812,29479.29233,3935,1880,PHP.eB CAG_mNeonGreen_NLS,0,0,64,3,0
20200904_TC9,3,XC38RR,10000,13385,13001,16967,1901,376864797,28155.75622,4073,1946,PHP.eB CAG_mNeonGreen_NLS,0,0,65,3,0
20201119_C4,3,MA41,10000,24355,16125,22715,2321,943391794,38735.03568,4558,2078,Saline Control,0,0,72,3,0
20201120_TC10,3,MA40,10000,19537,16401,23411,2598,1009765957,51684.80099,6659,2679,Cell Typing Only,0,0,73,0,0
20210719_BC5,3,BC5,10000,10040,9893,12941,662,663331240,66068.84861,6132,2786,PHP.V1 CAG_mNeonGreen_NLS;PHP.eB CAG_mNeonGreen_NLS,33069358,3293.760757,69,18,63.83022774
20210720_BC6,3,BC6,10000,7107,7023,9892,432,670585352,94355.61446,5907,2612,PHP.V1 CAG_mNeonGreen_NLS;PHP.eB CAG_mNeonGreen_NLS,15424347,2170.303504,70,19,47.58283182
20210726_TC11,3,TC11,7194,5183,5090,9908,204,615112499,118678.8538,8391,3197,PHP.eB CAG_mNeonGreen_NLS,0,0,76,25,0
20210728_C5,3,C5,10000,3603,3422,7587,175,290360657,80588.5809,4935,2274,Saline Control,0,0,48,3,0
20210728_TC12,3,TC12,10000,13239,13163,19132,1273,672633987,50807.00861,6052,2662,PHP.eB CAG_mNeonGreen_NLS,0,0,48,3,0