Isolate ID,Species,ENA accession,Host,Country,Year,Pubmed ID,Status,doi,SB Number WB1,M. bovis,SRR8600083,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB10,M. bovis,SRR8600089,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB101,M. bovis,SRR8600192,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB103,M. bovis,SRR8600193,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB104,M. bovis,SRR8600185,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB108,M. bovis,SRR8600186,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB109,M. bovis,SRR8600093,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB11,M. bovis,SRR8600088,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB110,M. bovis,SRR8600092,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB112,M. bovis,SRR8600095,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB113,M. bovis,SRR8600094,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB114,M. bovis,SRR8600097,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB115,M. bovis,SRR8600096,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB116,M. bovis,SRR8600099,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB117,M. bovis,SRR8600098,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB119,M. bovis,SRR8600091,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB120,M. bovis,SRR8600090,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB123,M. bovis,SRR8600187,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB124,M. bovis,SRR8600053,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB126,M. bovis,SRR8600074,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB127,M. bovis,SRR8600075,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB128,M. bovis,SRR8600076,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB129,M. bovis,SRR8600077,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 WB13,M. bovis,SRR8600164,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB130,M. bovis,SRR8600078,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0275 WB131,M. bovis,SRR8600079,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB132,M. bovis,SRR8600183,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB133,M. bovis,SRR8600184,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB134,M. bovis,SRR8600180,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB135,M. bovis,SRR8600179,Badger,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB136,M. bovis,SRR8600178,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB138,M. bovis,SRR8600177,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB139,M. bovis,SRR8600176,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB14,M. bovis,SRR8600163,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB140,M. bovis,SRR8600175,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB141,M. bovis,SRR8600174,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB142,M. bovis,SRR8600173,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB143,M. bovis,SRR8600182,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB144,M. bovis,SRR8600181,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB145,M. bovis,SRR8600260,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB146,M. bovis,SRR8600261,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB147,M. bovis,SRR8600258,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB148,M. bovis,SRR8600259,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB149,M. bovis,SRR8600264,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB150,M. bovis,SRR8600265,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB151,M. bovis,SRR8600298,Badger,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB152,M. bovis,SRR8600263,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB153,M. bovis,SRR8600299,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB154,M. bovis,SRR8600267,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB155,M. bovis,SRR8599999,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB156,M. bovis,SRR8599998,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB157,M. bovis,SRR8600001,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB158,M. bovis,SRR8600000,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB159,M. bovis,SRR8600003,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB16,M. bovis,SRR8600166,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB160,M. bovis,SRR8600002,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB161,M. bovis,SRR8600005,Badger,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB162,M. bovis,SRR8600004,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB163,M. bovis,SRR8600007,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB164,M. bovis,SRR8600006,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB165,M. bovis,SRR8600030,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB166,M. bovis,SRR8600031,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB167,M. bovis,SRR8600032,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB168,M. bovis,SRR8600033,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB169,M. bovis,SRR8600026,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB17,M. bovis,SRR8600165,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB170,M. bovis,SRR8600027,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB172,M. bovis,SRR8600028,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB173,M. bovis,SRR8600029,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB174,M. bovis,SRR8600034,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB176,M. bovis,SRR8600035,Badger,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB177,M. bovis,SRR8600156,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB178,M. bovis,SRR8600155,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB179,M. bovis,SRR8600154,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB180,M. bovis,SRR8600153,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB181,M. bovis,SRR8600160,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB183,M. bovis,SRR8600159,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB184,M. bovis,SRR8600158,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB185,M. bovis,SRR8600157,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB186,M. bovis,SRR8600162,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB187,M. bovis,SRR8600161,Badger,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB189,M. bovis,SRR8600051,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB19,M. bovis,SRR8600168,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB190,M. bovis,SRR8600052,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB191,M. bovis,SRR8600239,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB192,M. bovis,SRR8600240,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB195,M. bovis,SRR8600237,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB197,M. bovis,SRR8600238,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB198,M. bovis,SRR8600235,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB199,M. bovis,SRR8600236,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB2,M. bovis,SRR8600082,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB20,M. bovis,SRR8600167,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB200,M. bovis,SRR8600233,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB201,M. bovis,SRR8600234,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB202,M. bovis,SRR8600323,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB203,M. bovis,SRR8600322,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB204,M. bovis,SRR8600325,Badger,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB205,M. bovis,SRR8600324,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB206,M. bovis,SRR8600319,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB207,M. bovis,SRR8600318,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB208,M. bovis,SRR8600321,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB209,M. bovis,SRR8600286,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB21,M. bovis,SRR8600170,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB210,M. bovis,SRR8600315,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB213,M. bovis,SRR8600314,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB214,M. bovis,SRR8600326,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB215,M. bovis,SRR8600328,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB217,M. bovis,SRR8600329,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB218,M. bovis,SRR8600330,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB219,M. bovis,SRR8600331,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB22,M. bovis,SRR8600169,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB223,M. bovis,SRR8600332,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB224,M. bovis,SRR8600038,Badger,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB225,M. bovis,SRR8600334,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB227,M. bovis,SRR8600335,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB228,M. bovis,SRR8600336,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB229,M. bovis,SRR8600115,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB23,M. bovis,SRR8600172,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB230,M. bovis,SRR8600114,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB232,M. bovis,SRR8600216,Badger,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB24,M. bovis,SRR8600171,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB25,M. bovis,SRR8600058,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB26,M. bovis,SRR8600059,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB27,M. bovis,SRR8600060,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB28,M. bovis,SRR8600061,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB29,M. bovis,SRR8600054,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB30,M. bovis,SRR8600055,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB31,M. bovis,SRR8600056,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB32,M. bovis,SRR8600057,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB33,M. bovis,SRR8600062,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB34,M. bovis,SRR8600063,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB35,M. bovis,SRR8600305,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB36,M. bovis,SRR8600304,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB37,M. bovis,SRR8600303,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB38,M. bovis,SRR8600302,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB39,M. bovis,SRR8600309,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB4,M. bovis,SRR8600081,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB40,M. bovis,SRR8600308,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB41,M. bovis,SRR8600307,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB42,M. bovis,SRR8600306,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB43,M. bovis,SRR8600301,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB44,M. bovis,SRR8600300,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB45,M. bovis,SRR8600225,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB46,M. bovis,SRR8600226,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB47,M. bovis,SRR8600223,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB48,M. bovis,SRR8600224,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB49,M. bovis,SRR8600221,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB5,M. bovis,SRR8600080,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB50,M. bovis,SRR8600222,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB51,M. bovis,SRR8600219,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB52,M. bovis,SRR8600220,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB53,M. bovis,SRR8600217,Badger,UK,2001,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB54,M. bovis,SRR8600218,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB55,M. bovis,SRR8600140,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB56,M. bovis,SRR8600139,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB57,M. bovis,SRR8600142,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB58,M. bovis,SRR8600141,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB59,M. bovis,SRR8600136,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB6,M. bovis,SRR8600087,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB60,M. bovis,SRR8600135,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB61,M. bovis,SRR8600138,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB62,M. bovis,SRR8600137,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB63,M. bovis,SRR8600134,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB64,M. bovis,SRR8600133,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB66,M. bovis,SRR8600010,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB67,M. bovis,SRR8600011,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB68,M. bovis,SRR8600012,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB69,M. bovis,SRR8600013,Badger,UK,2002,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB7,M. bovis,SRR8600086,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB73,M. bovis,SRR8600014,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB76,M. bovis,SRR8600256,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB77,M. bovis,SRR8600016,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB78,M. bovis,SRR8600017,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB79,M. bovis,SRR8600018,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB8,M. bovis,SRR8600085,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB80,M. bovis,SRR8600019,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB81,M. bovis,SRR8600275,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB82,M. bovis,SRR8600274,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB83,M. bovis,SRR8600273,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB84,M. bovis,SRR8600272,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB85,M. bovis,SRR8600271,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB86,M. bovis,SRR8600270,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB87,M. bovis,SRR8600269,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB88,M. bovis,SRR8600268,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB89,M. bovis,SRR8600283,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB9,M. bovis,SRR8600084,Badger,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB90,M. bovis,SRR8600282,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB91,M. bovis,SRR8600190,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB92,M. bovis,SRR8600191,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB93,M. bovis,SRR8600188,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB94,M. bovis,SRR8600189,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB95,M. bovis,SRR8600194,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 WB97,M. bovis,SRR8600195,Badger,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 41-2165,M. bovis,SRR10482944,Badger,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 51-3292,M. bovis,SRR10482974,Badger,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 ID33,M. bovis,ERR841809,Badger,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID01,M. bovis,ERR125608,Badger,UK,2004,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID02,M. bovis,ERR125603,Badger,UK,2005,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID03,M. bovis,ERR125602,Badger,UK,2005,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID04,M. bovis,ERR125600,Badger,UK,2006,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID05,M. bovis,ERR125604,Badger,UK,2007,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 1067(2),M. bovis,ERR1815539,Buffalo,South Africa,2000,28412523,Published,https://doi.org/10.1016/j.meegid.2017.04.012,SB0130 1531(10),M. bovis,ERR1815543,Buffalo,South Africa,1999,28412523,Published,https://doi.org/10.1016/j.meegid.2017.04.012,SB0140 AgR120,M. bovis,ERR564377,Cat,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR278,M. bovis,ERR564469,Cat,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR17150,M. bovis,SRR7617638,Cat,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 12-9271,M. bovis,SRR1792350,Cat,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 B7,M. bovis,SRR7851341,Cattle,France,2007,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0140 C11,M. bovis,SRR7851314,Cattle,France,2010,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0130 E12,M. bovis,SRR7851351,Cattle,France,1995,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0140 F6,M. bovis,SRR7851320,Cattle,France,1998,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0145 G10,M. bovis,SRR7851305,Cattle,France,2004,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0140 G4,M. bovis,SRR7851364,Cattle,France,2000,31130937,Published,https://doi.org/10.3389/fmicb.2019.00955,SB0140 AF-21-00949-13,M. bovis,SRR8600206,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-01243-13,M. bovis,SRR8600250,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-01254-13,M. bovis,SRR8600247,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-01562-13,M. bovis,SRR8600245,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-01937-13,M. bovis,SRR8600243,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-02193-13,M. bovis,SRR8600244,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-02256-13,M. bovis,SRR8600251,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 AF-21-02868-13,M. bovis,SRR8600252,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,SB2059 AF-21-02975-13,M. bovis,SRR8600132,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-21-02979-12,M. bovis,SRR8600210,Cattle,UK,2012,31843054,Published,https://doi.org/10.7554/elife.45833,SB1604 AF-21-03026-13,M. bovis,SRR8600339,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-00259-13,M. bovis,SRR8600209,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-00402-13,M. bovis,SRR8600208,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-00446-13,M. bovis,SRR8600207,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-00707-13,M. bovis,SRR8600249,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-00875-13,M. bovis,SRR8600248,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern AF-61-01175-13,M. bovis,SRR8600246,Cattle,UK,2013,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-12-0681-08,M. bovis,SRR8600120,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB2611 HI-12-1411-07,M. bovis,SRR8600116,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-12-1439-06,M. bovis,SRR8600048,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-0157-10,M. bovis,SRR8600124,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0959 HI-16-0658-04,M. bovis,SRR8600287,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-1383-08,M. bovis,SRR8600121,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-1670-06,M. bovis,SRR8600046,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-16-2156-07,M. bovis,SRR8600047,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-2875-07,M. bovis,SRR8600040,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-16-3049-03,M. bovis,SRR8600297,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-3519-03,M. bovis,SRR8600294,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-16-4505-08,M. bovis,SRR8600123,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-16-4615-04,M. bovis,SRR8600288,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-0146-10,M. bovis,SRR8600214,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-0471-11,M. bovis,SRR8600212,Cattle,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-2303-05,M. bovis,SRR8600041,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB2617 HI-21-5271-11,M. bovis,SRR8600211,Cattle,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-5322-04,M. bovis,SRR8600295,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-5325-08,M. bovis,SRR8600327,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-21-5938-06,M. bovis,SRR8600044,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-21-6055-08,M. bovis,SRR8600119,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-6376-10,M. bovis,SRR8600215,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0956 HI-21-6689-05,M. bovis,SRR8600042,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB2059 HI-21-6700-03,M. bovis,SRR8600291,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-21-7049-06,M. bovis,SRR8600045,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-21-7695-08,M. bovis,SRR8600122,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-28-0119-08,M. bovis,SRR8600117,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-0208-93,M. bovis,SRR8600293,Cattle,UK,1993,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-61-0406-94,M. bovis,SRR8600290,Cattle,UK,1994,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-61-0755-89,M. bovis,SRR8600289,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-0794-89,M. bovis,SRR8600127,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-0795-89,M. bovis,SRR8600126,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-61-0988-10,M. bovis,SRR8600338,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1218-89,M. bovis,SRR8600131,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1220-89,M. bovis,SRR8600130,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1221-89,M. bovis,SRR8600129,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1244-89,M. bovis,SRR8600125,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1246-89,M. bovis,SRR8600128,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1248-89,M. bovis,SRR8600333,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1400-06,M. bovis,SRR8600043,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1545-89,M. bovis,SRR8600118,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-1679-89,M. bovis,SRR8600337,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,SB2059 HI-61-2087-89,M. bovis,SRR8599994,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-2290-89,M. bovis,SRR8599996,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-2292-89,M. bovis,SRR8599997,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-2298-89,M. bovis,SRR8600342,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-2299-89,M. bovis,SRR8599991,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-61-2460-89,M. bovis,SRR8599995,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-3684-89,M. bovis,SRR8599992,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 HI-61-3707-89,M. bovis,SRR8599993,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-3733-03,M. bovis,SRR8600296,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-4298-07,M. bovis,SRR8600039,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-4830-10,M. bovis,SRR8600213,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-4986-89,M. bovis,SRR8600340,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-5971-89,M. bovis,SRR8600341,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-6622-89,M. bovis,SRR8600292,Cattle,UK,1989,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-7407-88,M. bovis,SRR8600311,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-7435-88,M. bovis,SRR8600317,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,SB1415 HI-61-7436-88,M. bovis,SRR8600284,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-7438-88,M. bovis,SRR8600285,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-7439-88,M. bovis,SRR8600320,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern HI-61-7451-88,M. bovis,SRR8600316,Cattle,UK,1988,31843054,Published,https://doi.org/10.7554/elife.45833,New pattern TB1385,M. bovis,SRR8600110,Cattle,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1386,M. bovis,SRR8600108,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1387,M. bovis,SRR8600253,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1388,M. bovis,SRR8600198,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1389,M. bovis,SRR8600196,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1392,M. bovis,SRR8600204,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1397,M. bovis,SRR8600113,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1399,M. bovis,SRR8600025,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1411,M. bovis,SRR8600150,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1414,M. bovis,SRR8600067,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1441,M. bovis,SRR8600276,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1446,M. bovis,SRR8600049,Cattle,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1447,M. bovis,SRR8600232,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1454,M. bovis,SRR8600146,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1460,M. bovis,SRR8600106,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1463,M. bovis,SRR8600107,Cattle,UK,1998,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1464,M. bovis,SRR8600100,Cattle,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1465,M. bovis,SRR8600102,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1466,M. bovis,SRR8600023,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1467,M. bovis,SRR8600022,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1468,M. bovis,SRR8600024,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1469,M. bovis,SRR8600266,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1470,M. bovis,SRR8600262,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1472,M. bovis,SRR8600015,Cattle,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1473,M. bovis,SRR8600036,Cattle,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1474,M. bovis,SRR8600280,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1476,M. bovis,SRR8600279,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1479,M. bovis,SRR8600257,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1480,M. bovis,SRR8600111,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1481,M. bovis,SRR8600109,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1486,M. bovis,SRR8600197,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1497,M. bovis,SRR8600064,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1499,M. bovis,SRR8600069,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1501,M. bovis,SRR8600071,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1502,M. bovis,SRR8600073,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1503,M. bovis,SRR8600072,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1504,M. bovis,SRR8600312,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1505,M. bovis,SRR8600313,Cattle,UK,2012,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1506,M. bovis,SRR8600310,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1756,M. bovis,SRR8600105,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1757,M. bovis,SRR8600101,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1758,M. bovis,SRR8600103,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1759,M. bovis,SRR8600112,Cattle,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1761,M. bovis,SRR8600021,Cattle,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1762,M. bovis,SRR8600020,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1763,M. bovis,SRR8600255,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1764,M. bovis,SRR8600037,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1765,M. bovis,SRR8600281,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1766,M. bovis,SRR8600009,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1767,M. bovis,SRR8600050,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1768,M. bovis,SRR8600231,Cattle,UK,2006,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1769,M. bovis,SRR8600241,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1770,M. bovis,SRR8600145,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1771,M. bovis,SRR8600148,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1772,M. bovis,SRR8600151,Cattle,UK,2005,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1773,M. bovis,SRR8600144,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1775,M. bovis,SRR8600066,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1776,M. bovis,SRR8600070,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1778,M. bovis,SRR8600277,Cattle,UK,1999,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1779,M. bovis,SRR8600008,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1780,M. bovis,SRR8600230,Cattle,UK,1998,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1781,M. bovis,SRR8600229,Cattle,UK,1999,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1782,M. bovis,SRR8600228,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1784,M. bovis,SRR8600227,Cattle,UK,2011,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1785,M. bovis,SRR8600242,Cattle,UK,2010,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1786,M. bovis,SRR8600147,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0673 TB1787,M. bovis,SRR8600149,Cattle,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1788,M. bovis,SRR8600152,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1789,M. bovis,SRR8600143,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1790,M. bovis,SRR8600104,Cattle,UK,2009,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1798,M. bovis,SRR8600278,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1801,M. bovis,SRR8600254,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1803,M. bovis,SRR8600199,Cattle,UK,2007,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1805,M. bovis,SRR8600201,Cattle,UK,2004,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1808,M. bovis,SRR8600200,Cattle,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1809,M. bovis,SRR8600205,Cattle,UK,2000,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1812,M. bovis,SRR8600065,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0140 TB1815,M. bovis,SRR8600203,Cattle,UK,2008,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 TB1817,M. bovis,SRR8600068,Cattle,UK,2003,31843054,Published,https://doi.org/10.7554/elife.45833,SB0272 TB1819,M. bovis,SRR8600202,Cattle,UK,2012,31843054,Published,https://doi.org/10.7554/elife.45833,SB0263 13-3990_ND_Beef_13-A_1,M. bovis,SRR1792429,Cattle,USA,2013,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 12-5094_TX_Beef_12-A_3LNAB,M. bovis,SRR1792341,Cattle,USA,2012,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 12-5093_TX_Beef_12-A_3LNHD_THX,M. bovis,SRR1792340,Cattle,USA,2012,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 12-5092_TX_Beef_12-A_2Liver,M. bovis,SRR1792339,Cattle,USA,2012,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 12-5090_TX_Beef_12-A_2LNHD_THX,M. bovis,SRR1792338,Cattle,USA,2012,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 12-3930_TX_Beef_12-A_1,M. bovis,SRR1792334,Cattle,USA,2012,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3411_Herd L-11,M. bovis,SRR1792183,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3410_Herd L-10,M. bovis,SRR1792182,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3409_Herd L-9,M. bovis,SRR1792181,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3407_Herd L-8,M. bovis,SRR1792180,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3405_Herd L-7,M. bovis,SRR1792179,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3404_Herd L-6,M. bovis,SRR1792178,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-3403_Herd L-5,M. bovis,SRR1792177,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-0625_Herd L-3,M. bovis,SRR1792168,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-0615_Herd L-2,M. bovis,SRR1792167,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-0573_Herd L-1,M. bovis,SRR1792166,Cattle,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-3591_Herd H-2 (Steer),M. bovis,SRR1792121,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-2634_Herd J-2,M. bovis,SRR1792116,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-2630_Herd J-1-LNABD,M. bovis,SRR1792115,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-2629_Herd J-1-LNTHX,M. bovis,SRR1792114,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1897_Herd I,M. bovis,SRR1792105,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1568_Herd K,M. bovis,SRR1792100,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-0323_Herd H-1,M. bovis,SRR1792090,Cattle,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-0608_Herd G,M. bovis,SRR1792038,Cattle,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-3345_Herd E-3,M. bovis,SRR1792007,Cattle,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-3322_Herd E-2,M. bovis,SRR1792006,Cattle,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-1534_Herd E-1-LNABD,M. bovis,SRR1791997,Cattle,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-1531_Herd E-1-LNTHX,M. bovis,SRR1791996,Cattle,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-10984_Herd F-1,M. bovis,SRR1791994,Cattle,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9963_Herd C-LNAB,M. bovis,SRR1791985,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9955_Herd C-LNTHX,M. bovis,SRR1791984,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9945_Herd B-3-LNABD,M. bovis,SRR1791983,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9943_Herd B-3-LNHD,M. bovis,SRR1791982,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9942_Herd B-2-LNABD,M. bovis,SRR1791981,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9941_Herd B-2-LNTHX,M. bovis,SRR1791980,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-9937_Herd B-1,M. bovis,SRR1791979,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-8171_Herd A-2,M. bovis,SRR1791967,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 05-10941_Herd D,M. bovis,SRR1791935,Cattle,USA,2005,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-2564_MI_Mont_Beef_43,M. bovis,SRR5817699,Cattle,USA,2008,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-3557_MI_Mont_Dairy_41,M. bovis,SRR5817696,Cattle,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-8160_MI_Mont_Dairy_33,M. bovis,SRR5817669,Cattle,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-8159_MI_Mont_Dairy_33,M. bovis,SRR5817674,Cattle,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-8158_MI_Mont_Dairy_33,M. bovis,SRR5817675,Cattle,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-7295_MI_Mont_Dairy_33,M. bovis,SRR5817717,Cattle,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-6095_MI_Alco_Beef_11,M. bovis,SRR8073635,Cattle,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-5559_MI_Alco_Beef_9,M. bovis,SRR8073636,Cattle,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 09-0069FM,M. bovis,SRR7236414,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0070FM,M. bovis,SRR7236415,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 09-0080FM,M. bovis,SRR7236416,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0082FM,M. bovis,SRR7236176,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2570 09-0087FM,M. bovis,SRR7236377,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0110FM,M. bovis,SRR7236388,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0115FM,M. bovis,SRR7236392,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0116FM,M. bovis,SRR7236375,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0118FM,M. bovis,SRR7236393,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1758 09-0119FM,M. bovis,SRR7236308,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0120FM,M. bovis,SRR7236309,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0128FM,M. bovis,SRR7236310,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0486 09-0135FM,M. bovis,SRR7236311,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0145FM,M. bovis,SRR7236304,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0149FM,M. bovis,SRR7236305,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0151FM,M. bovis,SRR7236306,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0152FM,M. bovis,SRR7236307,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 09-0169FM,M. bovis,SRR7236313,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0175FM,M. bovis,SRR7236314,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0181FM,M. bovis,SRR7236340,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0186FM,M. bovis,SRR7236339,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0200FM,M. bovis,SRR7236342,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0213FM,M. bovis,SRR7236341,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 09-0219FM,M. bovis,SRR7236343,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0221FM,M. bovis,SRR7236346,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 09-0231FM,M. bovis,SRR7236348,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0234FM,M. bovis,SRR7236301,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 09-0236FM,M. bovis,SRR7236382,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 09-0238FM,M. bovis,SRR7236383,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0257FM,M. bovis,SRR7236386,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0275FM,M. bovis,SRR7236384,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 09-0278FM,M. bovis,SRR7236385,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 09-0282FM,M. bovis,SRR7236389,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0286FM,M. bovis,SRR7236198,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0292FM,M. bovis,SRR7236189,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0300FM,M. bovis,SRR7236152,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 09-0301FM,M. bovis,SRR7236180,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0304FM,M. bovis,SRR7236333,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0305FM,M. bovis,SRR7236119,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 09-0307FM,M. bovis,SRR7236295,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0327 09-0313FM,M. bovis,SRR7236223,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0314FM,M. bovis,SRR7236220,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0317FM,M. bovis,SRR7236222,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2110 09-0318FM,M. bovis,SRR7236303,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0289 09-0328FM,M. bovis,SRR7236263,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0986 09-0335FM,M. bovis,SRR7236300,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0338FM,M. bovis,SRR7236139,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0413FM,M. bovis,SRR7236335,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0418FM,M. bovis,SRR7236349,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0327 09-0419FM,M. bovis,SRR7236161,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0456FM,M. bovis,SRR7236162,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0461FM,M. bovis,SRR7236197,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0464FM,M. bovis,SRR7236196,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 09-0468FM,M. bovis,SRR7236199,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0477FM,M. bovis,SRR7236424,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 09-0487FM,M. bovis,SRR7236391,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0491FM,M. bovis,SRR7236195,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0497FM,M. bovis,SRR7236194,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0531FM,M. bovis,SRR7236191,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 09-0540FM,M. bovis,SRR7236190,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 09-0562FM,M. bovis,SRR7236234,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0593FM,M. bovis,SRR7236229,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0602FM,M. bovis,SRR7236230,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0604FM,M. bovis,SRR7236227,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0605FM,M. bovis,SRR7236228,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 09-0610FM,M. bovis,SRR7236225,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0130 09-0625FM,M. bovis,SRR7236226,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0642FM,M. bovis,SRR7236238,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 09-0643FM,M. bovis,SRR7236235,Cattle,Mexico,2009,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0103FM,M. bovis,SRR7236312,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0129FM,M. bovis,SRR7236224,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0131FM,M. bovis,SRR7236299,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 10-0138FM,M. bovis,SRR7236336,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 10-0143FM,M. bovis,SRR7236298,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0145FM,M. bovis,SRR7236302,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0151FM,M. bovis,SRR7236268,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 10-0152FM,M. bovis,SRR7236267,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1040 10-0157FM,M. bovis,SRR7236350,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0162FM,M. bovis,SRR7236138,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0167FM,M. bovis,SRR7236221,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0169FM,M. bovis,SRR7236315,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0170FM,M. bovis,SRR7236332,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0296FM,M. bovis,SRR7236218,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 10-0314FM,M. bovis,SRR7236108,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0320FM,M. bovis,SRR7236265,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0484 10-0373FM,M. bovis,SRR7236142,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 10-0388FM,M. bovis,SRR7236168,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2120 10-0399FM,M. bovis,SRR7236166,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2110 10-0451FM,M. bovis,SRR7236172,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0453FM,M. bovis,SRR7236171,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 10-0488FM,M. bovis,SRR7236170,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0543FM,M. bovis,SRR7236169,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 10-0600FM,M. bovis,SRR7236175,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0606FM,M. bovis,SRR7236174,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 10-0643FM,M. bovis,SRR7236126,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 10-0833FM,M. bovis,SRR7236127,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 10-0871FM,M. bovis,SRR7236128,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2120 10-0891FM,M. bovis,SRR7236122,Cattle,Mexico,2010,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 12-0432FM,M. bovis,SRR7236123,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 12-1531FM,M. bovis,SRR7236124,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1541FM,M. bovis,SRR7236125,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1553FM,M. bovis,SRR7236134,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1562FM,M. bovis,SRR7236135,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1568FM,M. bovis,SRR7236245,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1575FM,M. bovis,SRR7236244,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1667FM,M. bovis,SRR7236247,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1669FM,M. bovis,SRR7236246,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1707FM,M. bovis,SRR7236241,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1714FM,M. bovis,SRR7236242,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1715FM,M. bovis,SRR7236237,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1720FM,M. bovis,SRR7236236,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1721FM,M. bovis,SRR7236214,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1738FM,M. bovis,SRR7236215,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1740FM,M. bovis,SRR7236212,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1784FM,M. bovis,SRR7236213,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1787FM,M. bovis,SRR7236210,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1789FM,M. bovis,SRR7236211,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1810FM,M. bovis,SRR7236208,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1812FM,M. bovis,SRR7236209,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 12-1816FM,M. bovis,SRR7236206,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1817FM,M. bovis,SRR7236207,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1820FM,M. bovis,SRR7236323,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1829FM,M. bovis,SRR7236322,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1832FM,M. bovis,SRR7236321,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1840FM,M. bovis,SRR7236320,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1845FM,M. bovis,SRR7236319,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 12-1895FM,M. bovis,SRR7236318,Cattle,Mexico,2012,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1902FM,M. bovis,SRR7236316,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1903FM,M. bovis,SRR7236331,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1906FM,M. bovis,SRR7236279,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1907FM,M. bovis,SRR7236280,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1908FM,M. bovis,SRR7236281,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1909FM,M. bovis,SRR7236282,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1910FM,M. bovis,SRR7236283,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1911FM,M. bovis,SRR7236284,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1913FM,M. bovis,SRR7236285,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1914FM,M. bovis,SRR7236286,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1915FM,M. bovis,SRR7236271,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1916FM,M. bovis,SRR7236272,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1920FM,M. bovis,SRR7236395,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1922FM,M. bovis,SRR7236394,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1923FM,M. bovis,SRR7236397,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1754 13-1924FM,M. bovis,SRR7236396,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1927FM,M. bovis,SRR7236399,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1928FM,M. bovis,SRR7236398,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1929FM,M. bovis,SRR7236401,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 13-1933FM,M. bovis,SRR7236400,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 13-1934FM,M. bovis,SRR7236403,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 13-1935FM,M. bovis,SRR7236402,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1937FM,M. bovis,SRR7236354,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0130 13-1938FM,M. bovis,SRR7236355,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1942FM,M. bovis,SRR7236352,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1943FM,M. bovis,SRR7236353,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1944FM,M. bovis,SRR7236358,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1945FM,M. bovis,SRR7236359,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 13-1950FM,M. bovis,SRR7236356,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 13-1951FM,M. bovis,SRR7236357,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2628 13-1957FM,M. bovis,SRR7236362,Cattle,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 15-2742FM,M. bovis,SRR7236184,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 15-2743FM,M. bovis,SRR7236183,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 15-2931FM,M. bovis,SRR7236182,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 15-2932FM,M. bovis,SRR7236181,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 15-2939FM,M. bovis,SRR7236188,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 15-2947FM,M. bovis,SRR7236187,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2579 15-2949FM,M. bovis,SRR7236186,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2579 15-2955FM,M. bovis,SRR7236185,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 15-2963FM,M. bovis,SRR7236179,Cattle,Mexico,2015,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1493FM,M. bovis,SRR7236147,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1494FM,M. bovis,SRR7236148,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1497FM,M. bovis,SRR7236150,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1498FM,M. bovis,SRR7236143,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1499FM,M. bovis,SRR7236144,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1502FM,M. bovis,SRR7236146,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1504FM,M. bovis,SRR7236140,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1509FM,M. bovis,SRR7236141,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1510FM,M. bovis,SRR7236275,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1511FM,M. bovis,SRR7236151,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-1512FM,M. bovis,SRR7236404,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1513FM,M. bovis,SRR7236405,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1514FM,M. bovis,SRR7236406,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1517FM,M. bovis,SRR7236408,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1518FM,M. bovis,SRR7236409,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1519FM,M. bovis,SRR7236252,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0131 97-1520FM,M. bovis,SRR7236258,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2053 97-1521FM,M. bovis,SRR7236117,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1522FM,M. bovis,SRR7236116,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1524FM,M. bovis,SRR7236115,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1525FM,M. bovis,SRR7236114,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-1526FM,M. bovis,SRR7236113,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1528FM,M. bovis,SRR7236111,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1529FM,M. bovis,SRR7236110,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2069 97-1530FM,M. bovis,SRR7236121,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1531FM,M. bovis,SRR7236120,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1532FM,M. bovis,SRR7236155,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-1533FM,M. bovis,SRR7236156,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-1536FM,M. bovis,SRR7236153,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1538FM,M. bovis,SRR7236154,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2572 97-1540FM,M. bovis,SRR7236159,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1541FM,M. bovis,SRR7236160,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0327 97-1542FM,M. bovis,SRR7236157,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-1543FM,M. bovis,SRR7236158,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1548FM,M. bovis,SRR7236163,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-1549FM,M. bovis,SRR7236164,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2166FM,M. bovis,SRR7236201,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2167FM,M. bovis,SRR7236200,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2168FM,M. bovis,SRR7236203,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2170FM,M. bovis,SRR7236202,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2171FM,M. bovis,SRR7236205,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 97-2174FM,M. bovis,SRR7236204,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2175FM,M. bovis,SRR7236351,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2176FM,M. bovis,SRR7236347,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2177FM,M. bovis,SRR7236266,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2178FM,M. bovis,SRR7236217,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2181FM,M. bovis,SRR7236328,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0327 97-2187FM,M. bovis,SRR7236254,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2188FM,M. bovis,SRR7236255,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2190FM,M. bovis,SRR7236248,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2191FM,M. bovis,SRR7236249,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2192FM,M. bovis,SRR7236250,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2193FM,M. bovis,SRR7236251,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2194FM,M. bovis,SRR7236260,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-2197FM,M. bovis,SRR7236261,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2201FM,M. bovis,SRR7236290,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2204FM,M. bovis,SRR7236289,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-2206FM,M. bovis,SRR7236288,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2208FM,M. bovis,SRR7236287,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-2210FM,M. bovis,SRR7236294,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2576 97-2213FM,M. bovis,SRR7236293,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2248FM,M. bovis,SRR7236292,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2249FM,M. bovis,SRR7236291,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2251FM,M. bovis,SRR7236297,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2252FM,M. bovis,SRR7236296,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2256FM,M. bovis,SRR7236413,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0275 97-2263FM,M. bovis,SRR7236337,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0484 97-2264FM,M. bovis,SRR7236329,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2572 97-2267FM,M. bovis,SRR7236326,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2073 97-2268FM,M. bovis,SRR7236327,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2270FM,M. bovis,SRR7236324,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2272FM,M. bovis,SRR7236325,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2274FM,M. bovis,SRR7236107,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2275FM,M. bovis,SRR7236109,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2574 97-2277FM,M. bovis,SRR7236365,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2284FM,M. bovis,SRR7236364,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2293FM,M. bovis,SRR7236367,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2069 97-2294FM,M. bovis,SRR7236366,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2298FM,M. bovis,SRR7236361,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2299FM,M. bovis,SRR7236360,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2300FM,M. bovis,SRR7236370,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0327 97-2301FM,M. bovis,SRR7236368,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2305FM,M. bovis,SRR7236376,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2306FM,M. bovis,SRR7236338,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2313FM,M. bovis,SRR7236373,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2578 97-2314FM,M. bovis,SRR7236417,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2319FM,M. bovis,SRR7236418,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2613 97-2396FM,M. bovis,SRR7236419,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2398FM,M. bovis,SRR7236420,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2399FM,M. bovis,SRR7236421,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2401FM,M. bovis,SRR7236422,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2403FM,M. bovis,SRR7236423,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2404FM,M. bovis,SRR7236137,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1526 97-2405FM,M. bovis,SRR7236136,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2073 97-2406FM,M. bovis,SRR7236273,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1526 97-2408FM,M. bovis,SRR7236270,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2410FM,M. bovis,SRR7236133,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1216 97-2413FM,M. bovis,SRR7236132,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2110 97-2415FM,M. bovis,SRR7236130,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2418FM,M. bovis,SRR7236262,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2419FM,M. bovis,SRR7236256,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-2421FM,M. bovis,SRR7236412,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2422FM,M. bovis,SRR7236411,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2423FM,M. bovis,SRR7236426,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2424FM,M. bovis,SRR7236334,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2425FM,M. bovis,SRR7236106,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0140 97-2427FM,M. bovis,SRR7236425,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB2572 97-2429FM,M. bovis,SRR7236410,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2435FM,M. bovis,SRR7236118,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2436FM,M. bovis,SRR7236259,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2437FM,M. bovis,SRR7236177,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0145 97-2439FM,M. bovis,SRR7236274,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0986 97-2445FM,M. bovis,SRR7236257,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2448FM,M. bovis,SRR7236277,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB1846 97-2449FM,M. bovis,SRR7236278,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 97-2450FM,M. bovis,SRR7236173,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,New pattern 97-2453FM,M. bovis,SRR7236276,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 97-2457FM,M. bovis,SRR7236219,Cattle,Mexico,1997,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,New pattern 24-MBovis,M. bovis,SRR10482975,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 25-MBovis,M. bovis,SRR10482956,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 26-MBovis,M. bovis,SRR10482935,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 27-MBovis,M. bovis,SRR10482958,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 29-MBovis,M. bovis,SRR10482976,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 30-MBovis,M. bovis,SRR10482957,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,New pattern 35-MBovis,M. bovis,SRR10482951,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 36-MBovis,M. bovis,SRR10482936,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 37-MBovis,M. bovis,SRR10482967,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 38-MBovis,M. bovis,SRR10482945,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 41-MBovis,M. bovis,SRR10482962,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 42-MBovis,M. bovis,SRR10482970,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 43-MBovis,M. bovis,SRR10482932,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 44-MBovis,M. bovis,SRR10482954,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 45-MBovis,M. bovis,SRR10482960,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 47-MBovis,M. bovis,SRR10482959,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,New pattern 48-MBovis,M. bovis,SRR10482971,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 49-MBovis,M. bovis,SRR10482950,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 5-10284,M. bovis,SRR10482941,Cattle,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 50-MBovis,M. bovis,SRR10482934,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,New pattern 51-MBovis,M. bovis,SRR10482947,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 52-3698,M. bovis,SRR10482943,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 54-MBovis,M. bovis,SRR10482949,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 55-4348,M. bovis,SRR10482963,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 56-MBovis,M. bovis,SRR10482933,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 59-6110,M. bovis,SRR10482973,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 59-MBovis,M. bovis,SRR10482968,Cattle,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 c_4875,M. bovis,SRR1657061,Cattle,Costa Rica,2013,25988479,Published,https://doi.org/10.3201/eid2106.141821,SB1041 c_6347,M. bovis,SRR1657068,Cattle,Costa Rica,2013,25988479,Published,https://doi.org/10.3201/eid2106.141821,SB1041 BT-70250,M. bovis,SRR1657070,Cattle,Panama,1997,25988479,Published,https://doi.org/10.3201/eid2106.141821,SB0145 2008-0665,M. bovis,SRR6467893,Cattle,Canada,2008,29650575,Published,https://doi.org/10.1128/genomea.00258-18,SB1071 2011-0565,M. bovis,SRR6467885,Cattle,Canada,2011,29650575,Published,https://doi.org/10.1128/genomea.00258-18,SB0673 3912(B),M. bovis,ERR1815544,Cattle,South Africa,2003,28412523,Published,https://doi.org/10.1016/j.meegid.2017.04.012,SB0130 ID07,M. bovis,ERR125599,Cattle,UK,1999,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID100,M. bovis,ERR841856,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID101,M. bovis,ERR841849,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID102,M. bovis,ERR841853,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID103,M. bovis,ERR841879,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID104,M. bovis,ERR841858,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID106,M. bovis,ERR841865,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID108,M. bovis,ERR841864,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID109,M. bovis,ERR841863,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID110,M. bovis,ERR841875,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID111,M. bovis,ERR841868,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID112,M. bovis,ERR841870,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID113,M. bovis,ERR841871,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID114,M. bovis,ERR841867,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID115,M. bovis,ERR841873,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID116,M. bovis,ERR841862,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID117,M. bovis,ERR841859,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID118,M. bovis,ERR841869,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID119,M. bovis,ERR841861,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID120,M. bovis,ERR841878,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID121,M. bovis,ERR841857,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID122,M. bovis,ERR841860,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID123,M. bovis,ERR841872,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID124,M. bovis,ERR841877,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID125,M. bovis,ERR841874,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID126,M. bovis,ERR841902,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID127,M. bovis,ERR841881,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID128,M. bovis,ERR841899,Cattle,UK,1998,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID130,M. bovis,ERR841888,Cattle,UK,2002,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID131,M. bovis,ERR841889,Cattle,UK,2002,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID132,M. bovis,ERR841887,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID133,M. bovis,ERR841886,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID134,M. bovis,ERR841898,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID135,M. bovis,ERR841891,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID136,M. bovis,ERR841893,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID137,M. bovis,ERR841894,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID138,M. bovis,ERR841890,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID139,M. bovis,ERR841896,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID140,M. bovis,ERR841885,Cattle,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID141,M. bovis,ERR841882,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID142,M. bovis,ERR841892,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID143,M. bovis,ERR841884,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID144,M. bovis,ERR841901,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID145,M. bovis,ERR841880,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID146,M. bovis,ERR841883,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID147,M. bovis,ERR841895,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID148,M. bovis,ERR841900,Cattle,UK,2011,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID149,M. bovis,ERR841897,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID34,M. bovis,ERR841788,Cattle,UK,1998,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID35,M. bovis,ERR841806,Cattle,UK,1998,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID36,M. bovis,ERR841795,Cattle,UK,1999,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID37,M. bovis,ERR841796,Cattle,UK,2000,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID38,M. bovis,ERR841794,Cattle,UK,2000,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID39,M. bovis,ERR841793,Cattle,UK,2000,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID40,M. bovis,ERR841805,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID41,M. bovis,ERR841798,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID42,M. bovis,ERR841800,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID43,M. bovis,ERR841801,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID44,M. bovis,ERR841797,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID45,M. bovis,ERR841803,Cattle,UK,2003,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID46,M. bovis,ERR841792,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID47,M. bovis,ERR841789,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID48,M. bovis,ERR841799,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID49,M. bovis,ERR841791,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID50,M. bovis,ERR841808,Cattle,UK,2004,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID51,M. bovis,ERR841787,Cattle,UK,2008,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID52,M. bovis,ERR841790,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID53,M. bovis,ERR841810,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID54,M. bovis,ERR841802,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID55,M. bovis,ERR841807,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID56,M. bovis,ERR841804,Cattle,UK,2005,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID57,M. bovis,ERR841832,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID58,M. bovis,ERR841812,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID59,M. bovis,ERR841829,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID60,M. bovis,ERR841819,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID61,M. bovis,ERR841820,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID62,M. bovis,ERR841818,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID63,M. bovis,ERR841817,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID64,M. bovis,ERR841828,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID65,M. bovis,ERR841822,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID66,M. bovis,ERR841824,Cattle,UK,2006,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID67,M. bovis,ERR841825,Cattle,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID68,M. bovis,ERR841821,Cattle,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID69,M. bovis,ERR841816,Cattle,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID70,M. bovis,ERR841813,Cattle,UK,2007,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID71,M. bovis,ERR841823,Cattle,UK,2008,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID72,M. bovis,ERR841815,Cattle,UK,2008,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID73,M. bovis,ERR841831,Cattle,UK,2008,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID74,M. bovis,ERR841811,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID75,M. bovis,ERR841814,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID76,M. bovis,ERR841833,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID77,M. bovis,ERR841826,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID78,M. bovis,ERR841830,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID79,M. bovis,ERR841827,Cattle,UK,2009,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID80,M. bovis,ERR841855,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID81,M. bovis,ERR841835,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID82,M. bovis,ERR841852,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID83,M. bovis,ERR841842,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID84,M. bovis,ERR841843,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID85,M. bovis,ERR841841,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID86,M. bovis,ERR841840,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID87,M. bovis,ERR841851,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID88,M. bovis,ERR841845,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID89,M. bovis,ERR841847,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID90,M. bovis,ERR841848,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID91,M. bovis,ERR841844,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID92,M. bovis,ERR841850,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID93,M. bovis,ERR841839,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID94,M. bovis,ERR841836,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID95,M. bovis,ERR841846,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID96,M. bovis,ERR841838,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID97,M. bovis,ERR841854,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID98,M. bovis,ERR841834,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 ID99,M. bovis,ERR841837,Cattle,UK,2010,26972511,Published,https://doi.org/10.1016/j.epidem.2015.08.003,SB0140 AgR10,M. bovis,ERR564269,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR101,M. bovis,ERR564359,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR102,M. bovis,ERR564360,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR108,M. bovis,ERR564366,Cattle,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR109,M. bovis,ERR564367,Cattle,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0273 AgR11,M. bovis,ERR564270,Cattle,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR113,M. bovis,ERR564370,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR114,M. bovis,ERR564371,Cattle,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR118,M. bovis,ERR564375,Cattle,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR121,M. bovis,SRR5216907,Cattle,New Zealand,1988,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR128,M. bovis,SRR5216953,Cattle,New Zealand,1989,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR13,M. bovis,ERR564272,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR130,M. bovis,ERR564382,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR133,M. bovis,ERR564384,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR135,M. bovis,ERR564386,Cattle,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR136,M. bovis,SRR5216789,Cattle,New Zealand,1991,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR137,M. bovis,ERR564387,Cattle,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR138,M. bovis,ERR564388,Cattle,New Zealand,1995,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR14,M. bovis,ERR564273,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR142,M. bovis,ERR564392,Cattle,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR144,M. bovis,ERR564394,Cattle,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR147,M. bovis,ERR564395,Cattle,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR148,M. bovis,ERR564396,Cattle,New Zealand,1995,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR15,M. bovis,ERR564274,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR152,M. bovis,ERR564399,Cattle,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR156,M. bovis,ERR564402,Cattle,New Zealand,1990,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR157,M. bovis,ERR564403,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR158,M. bovis,ERR564404,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR159,M. bovis,ERR564405,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR16,M. bovis,ERR564275,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR160,M. bovis,ERR564406,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR161,M. bovis,ERR564407,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR163,M. bovis,ERR564409,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR165,M. bovis,ERR564411,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR166,M. bovis,ERR564412,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR167,M. bovis,ERR564413,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR168,M. bovis,ERR564414,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR17,M. bovis,ERR564276,Cattle,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR171,M. bovis,ERR564417,Cattle,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR174,M. bovis,ERR564420,Cattle,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR175,M. bovis,ERR564421,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR176,M. bovis,ERR564422,Cattle,New Zealand,1991,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR180,M. bovis,ERR564426,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR181,M. bovis,ERR564427,Cattle,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR182,M. bovis,ERR564428,Cattle,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR184,M. bovis,ERR564430,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR185,M. bovis,ERR564431,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR188,M. bovis,ERR564434,Cattle,New Zealand,1991,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR189,M. bovis,ERR564435,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR193,M. bovis,ERR564438,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR196,M. bovis,ERR564441,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR198,M. bovis,ERR564442,Cattle,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR199,M. bovis,ERR564443,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR2,M. bovis,ERR564261,Cattle,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR20,M. bovis,ERR564279,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR203,M. bovis,ERR564445,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR205,M. bovis,ERR564447,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR209,M. bovis,ERR564449,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR21,M. bovis,ERR564280,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR211,M. bovis,ERR564450,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR212,M. bovis,ERR564451,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR214,M. bovis,ERR564452,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR217,M. bovis,ERR564454,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR219,M. bovis,ERR564456,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2635 AgR22,M. bovis,ERR564281,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR220,M. bovis,ERR564457,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR222,M. bovis,SRR5216819,Cattle,New Zealand,1987,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR223,M. bovis,ERR564459,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR224,M. bovis,ERR564460,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR226,M. bovis,ERR564461,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR228,M. bovis,SRR5216860,Cattle,New Zealand,2011,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR229,M. bovis,SRR5216900,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR23,M. bovis,ERR564282,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR230,M. bovis,ERR564462,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR231,M. bovis,ERR564463,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR233,M. bovis,SRR5216857,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR234,M. bovis,SRR5216924,Cattle,New Zealand,2011,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR235,M. bovis,SRR5216690,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR237,M. bovis,SRR5216901,Cattle,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR238,M. bovis,SRR5216816,Cattle,New Zealand,2011,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR24,M. bovis,ERR564283,Cattle,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR240,M. bovis,SRR5216932,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR242,M. bovis,SRR5216775,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR244,M. bovis,SRR5216792,Cattle,New Zealand,2011,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR245,M. bovis,SRR5216874,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR246,M. bovis,SRR5216728,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR247,M. bovis,SRR5216735,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR248,M. bovis,SRR5216931,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2643 AgR25,M. bovis,ERR564284,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR250,M. bovis,SRR5216822,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR251,M. bovis,SRR5216856,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR253,M. bovis,SRR5216745,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR254,M. bovis,SRR5216815,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR255,M. bovis,SRR5216905,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR256,M. bovis,ERR564465,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR257,M. bovis,ERR564466,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2642 AgR258,M. bovis,ERR564467,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR261,M. bovis,SRR5216756,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR262,M. bovis,SRR5216776,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR263,M. bovis,SRR5216869,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR265,M. bovis,SRR5216717,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR268,M. bovis,SRR5216896,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR269,M. bovis,SRR5216823,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR27,M. bovis,ERR564286,Cattle,New Zealand,1984,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR270,M. bovis,SRR5216785,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR271,M. bovis,SRR5216872,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2565 AgR272,M. bovis,SRR5216968,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR273,M. bovis,SRR5216726,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR274,M. bovis,SRR5216804,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2565 AgR275,M. bovis,SRR5216813,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR276,M. bovis,SRR5216942,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR28,M. bovis,ERR564287,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR284,M. bovis,SRR5216870,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR285,M. bovis,SRR5216897,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR29,M. bovis,ERR564288,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR295,M. bovis,SRR5216868,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR297,M. bovis,SRR5216985,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR299,M. bovis,SRR5216737,Cattle,New Zealand,2010,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1446 AgR30,M. bovis,ERR564289,Cattle,New Zealand,1984,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR301,M. bovis,SRR5216930,Cattle,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR302,M. bovis,SRR5216902,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR303,M. bovis,SRR5216770,Cattle,New Zealand,1989,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR305,M. bovis,SRR5216832,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR308,M. bovis,SRR5216977,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR309,M. bovis,SRR5216750,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR31,M. bovis,ERR564290,Cattle,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR310,M. bovis,SRR5216933,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR313,M. bovis,SRR5216955,Cattle,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR316,M. bovis,SRR5216963,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR33,M. bovis,ERR564292,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR36,M. bovis,ERR564295,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR37,M. bovis,ERR564296,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR38,M. bovis,ERR564297,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR39,M. bovis,ERR564298,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR4,M. bovis,ERR564263,Cattle,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR40,M. bovis,ERR564299,Cattle,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR41,M. bovis,ERR564300,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR43,M. bovis,ERR564302,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR44,M. bovis,ERR564303,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR45,M. bovis,ERR564304,Cattle,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR46,M. bovis,ERR564305,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR5,M. bovis,ERR564264,Cattle,New Zealand,1995,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR53,M. bovis,ERR564312,Cattle,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR54,M. bovis,ERR564313,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR57,M. bovis,ERR564316,Cattle,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR58,M. bovis,ERR564317,Cattle,New Zealand,1995,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0273 AgR60,M. bovis,ERR564319,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR61,M. bovis,ERR564320,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR62,M. bovis,ERR564321,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR63,M. bovis,ERR564322,Cattle,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR64,M. bovis,ERR564323,Cattle,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR67,M. bovis,ERR564326,Cattle,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR69,M. bovis,ERR564328,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR7,M. bovis,ERR564266,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR70,M. bovis,ERR564329,Cattle,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR71,M. bovis,ERR564330,Cattle,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR75,M. bovis,ERR564334,Cattle,New Zealand,1987,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR76,M. bovis,ERR564335,Cattle,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0980 AgR77,M. bovis,ERR564336,Cattle,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR78,M. bovis,ERR564337,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR8,M. bovis,ERR564267,Cattle,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR80,M. bovis,ERR564339,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR81,M. bovis,ERR564340,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR82,M. bovis,ERR564341,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR84,M. bovis,ERR564343,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR85,M. bovis,ERR564344,Cattle,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR86,M. bovis,ERR564345,Cattle,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR88,M. bovis,ERR564346,Cattle,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR90,M. bovis,ERR564348,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR92,M. bovis,ERR564350,Cattle,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR93,M. bovis,ERR564351,Cattle,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR97,M. bovis,ERR564355,Cattle,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR98,M. bovis,ERR564356,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgRN13,M. bovis,ERR564471,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN15,M. bovis,ERR564472,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN20,M. bovis,ERR564473,Cattle,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN41,M. bovis,ERR564474,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN44,M. bovis,ERR564475,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN45,M. bovis,ERR564476,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN51,M. bovis,ERR564477,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgRN9,M. bovis,ERR564470,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 N11,M. bovis,SRR5216694,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N16,M. bovis,SRR5216780,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N19,M. bovis,SRR5216915,Cattle,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N23,M. bovis,SRR5216766,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N27,M. bovis,SRR5216710,Cattle,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N29,M. bovis,SRR5216800,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N36,M. bovis,SRR5216734,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N37,M. bovis,SRR5216701,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N38,M. bovis,SRR5216777,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N42,M. bovis,SRR5216948,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N47,M. bovis,SRR5216784,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N49,M. bovis,SRR5216969,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N50,M. bovis,SRR5216935,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N52,M. bovis,SRR5216866,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N53,M. bovis,SRR5216778,Cattle,New Zealand,2013,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR100184,M. bovis,SRR7617797,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR100477,M. bovis,SRR7617796,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR100540,M. bovis,SRR7617714,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR100792,M. bovis,SRR7617715,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1446 AgR101097,M. bovis,SRR7617712,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2642 AgR1013613,M. bovis,SRR7617389,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR10667,M. bovis,SRR7617360,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR10682,M. bovis,SRR7617358,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR10683,M. bovis,SRR7617359,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR110570,M. bovis,SRR7617711,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR110732,M. bovis,SRR7617708,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR11491,M. bovis,SRR7617862,Cattle,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR120111,M. bovis,SRR7617709,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR120574,M. bovis,SRR7617716,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR130037,M. bovis,SRR7617856,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130038,M. bovis,SRR7617855,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2645 AgR130039,M. bovis,SRR7617858,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130040,M. bovis,SRR7617857,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130084,M. bovis,SRR7617852,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130086,M. bovis,SRR7617851,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR130350,M. bovis,SRR7617854,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2646 AgR130387,M. bovis,SRR7617853,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130388,M. bovis,SRR7617860,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130389,M. bovis,SRR7617859,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130390,M. bovis,SRR7617749,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2645 AgR130502,M. bovis,SRR7617748,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR130563,M. bovis,SRR7617751,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR140326,M. bovis,SRR7617750,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR150110,M. bovis,SRR7617753,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1601,M. bovis,SRR7617828,Cattle,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0273 AgR1602,M. bovis,SRR7617825,Cattle,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1605,M. bovis,SRR7617824,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1606,M. bovis,SRR7617821,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1606931,M. bovis,SRR7617776,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1607,M. bovis,SRR7617822,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1607381,M. bovis,SRR7617777,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR160775,M. bovis,SRR7617757,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR160791,M. bovis,SRR7617756,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR160792,M. bovis,SRR7617604,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1608,M. bovis,SRR7617829,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR160852,M. bovis,SRR7617602,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1609,M. bovis,SRR7617830,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1610,M. bovis,SRR7617456,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR16101,M. bovis,SRR7617495,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR16104,M. bovis,SRR7617496,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR16105,M. bovis,SRR7617491,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2639 AgR16106,M. bovis,SRR7617490,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR16107,M. bovis,SRR7617493,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1611,M. bovis,SRR7617455,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1615,M. bovis,SRR7617451,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1616,M. bovis,SRR7617454,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1617,M. bovis,SRR7617453,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1618,M. bovis,SRR7617460,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1619,M. bovis,SRR7617459,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1622,M. bovis,SRR7617592,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1623,M. bovis,SRR7617593,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1624,M. bovis,SRR7617594,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1625,M. bovis,SRR7617595,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1628,M. bovis,SRR7617598,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1630,M. bovis,SRR7617600,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1634,M. bovis,SRR7617746,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1635,M. bovis,SRR7617745,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1636,M. bovis,SRR7617744,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1637,M. bovis,SRR7617743,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1638,M. bovis,SRR7617742,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1640,M. bovis,SRR7617740,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1652,M. bovis,SRR7617366,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1660,M. bovis,SRR7617524,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1661,M. bovis,SRR7617527,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1664,M. bovis,SRR7617518,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1665,M. bovis,SRR7617668,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1666,M. bovis,SRR7617669,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1668,M. bovis,SRR7617671,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1669,M. bovis,SRR7617672,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1671,M. bovis,SRR7617665,Cattle,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1677,M. bovis,SRR7617812,Cattle,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1897 AgR16794,M. bovis,SRR7617492,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1684,M. bovis,SRR7617809,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1685,M. bovis,SRR7617816,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1686,M. bovis,SRR7617815,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1687,M. bovis,SRR7617814,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1689,M. bovis,SRR7617813,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0054 AgR170058,M. bovis,SRR7617603,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170080,M. bovis,SRR7617608,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1701,M. bovis,SRR7617703,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170103,M. bovis,SRR7617609,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170110,M. bovis,SRR7617606,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170145,M. bovis,SRR7617607,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170170,M. bovis,SRR7617610,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2645 AgR170171,M. bovis,SRR7617611,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2645 AgR170181,M. bovis,SRR7617467,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170216,M. bovis,SRR7617465,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1702452,M. bovis,SRR7617364,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1702501,M. bovis,SRR7617779,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170265,M. bovis,SRR7617464,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170271,M. bovis,SRR7617463,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170275,M. bovis,SRR7617462,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170276,M. bovis,SRR7617461,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2645 AgR170291,M. bovis,SRR7617471,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170307,M. bovis,SRR7617565,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170308,M. bovis,SRR7617833,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170309,M. bovis,SRR7617834,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170349,M. bovis,SRR7617835,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170351,M. bovis,SRR7617836,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170368,M. bovis,SRR7617837,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2647 AgR170369,M. bovis,SRR7617838,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170386,M. bovis,SRR7617839,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170392,M. bovis,SRR7617840,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR170393,M. bovis,SRR7617831,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1446 AgR170395,M. bovis,SRR7617832,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170397,M. bovis,SRR7617695,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1704033,M. bovis,SRR7617624,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170417,M. bovis,SRR7617694,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170418,M. bovis,SRR7617697,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170419,M. bovis,SRR7617696,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170421,M. bovis,SRR7617691,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170428,M. bovis,SRR7617690,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170432,M. bovis,SRR7617693,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170437,M. bovis,SRR7617692,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170438,M. bovis,SRR7617689,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170439,M. bovis,SRR7617688,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170443,M. bovis,SRR7617547,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170444,M. bovis,SRR7617548,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170481,M. bovis,SRR7617545,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170512,M. bovis,SRR7617546,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170598,M. bovis,SRR7617543,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1706,M. bovis,SRR7617698,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170603,M. bovis,SRR7617544,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2639 AgR170607,M. bovis,SRR7617541,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170664,M. bovis,SRR7617539,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170708,M. bovis,SRR7617384,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170754,M. bovis,SRR7617383,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1707701,M. bovis,SRR7617679,Cattle,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1717,M. bovis,SRR7617632,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1723,M. bovis,SRR7617477,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1724,M. bovis,SRR7617476,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1725,M. bovis,SRR7617479,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1730,M. bovis,SRR7617844,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1732,M. bovis,SRR7617842,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1733,M. bovis,SRR7617847,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1734,M. bovis,SRR7617848,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1737,M. bovis,SRR7617849,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1738,M. bovis,SRR7617850,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1743,M. bovis,SRR7617651,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1744,M. bovis,SRR7617650,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1745,M. bovis,SRR7617649,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1746,M. bovis,SRR7617648,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1747,M. bovis,SRR7617653,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1751,M. bovis,SRR7617504,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1752,M. bovis,SRR7617505,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1753,M. bovis,SRR7617498,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0273 AgR1754,M. bovis,SRR7617499,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1755,M. bovis,SRR7617500,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1757,M. bovis,SRR7617506,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1759,M. bovis,SRR7617425,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1760,M. bovis,SRR7617424,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1761,M. bovis,SRR7617427,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1762,M. bovis,SRR7617426,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1763,M. bovis,SRR7617421,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1764,M. bovis,SRR7617420,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1765,M. bovis,SRR7617820,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1766,M. bovis,SRR7617819,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1767,M. bovis,SRR7617417,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1768,M. bovis,SRR7617416,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1769,M. bovis,SRR7617469,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1770,M. bovis,SRR7617470,Cattle,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180045,M. bovis,SRR7617382,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180049,M. bovis,SRR7617381,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180057,M. bovis,SRR7617388,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180071,M. bovis,SRR7617387,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180078,M. bovis,SRR7617386,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR180086,M. bovis,SRR7617385,Cattle,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1830,M. bovis,SRR7617410,Cattle,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR200360,M. bovis,SRR7617390,Cattle,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR288,M. bovis,SRR7617583,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR30347,M. bovis,SRR7617449,Cattle,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR314,M. bovis,SRR7617584,Cattle,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR315,M. bovis,SRR7617585,Cattle,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR405,M. bovis,SRR7617589,Cattle,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR408,M. bovis,SRR7617590,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR41016,M. bovis,SRR7617787,Cattle,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR412,M. bovis,SRR7617446,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR41346,M. bovis,SRR7617786,Cattle,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR414,M. bovis,SRR7617444,Cattle,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR41511,M. bovis,SRR7617785,Cattle,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR416,M. bovis,SRR7617442,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR420,M. bovis,SRR7617439,Cattle,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR421,M. bovis,SRR7617448,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2044 AgR501,M. bovis,SRR7617447,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR505,M. bovis,SRR7617429,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR507,M. bovis,SRR7617434,Cattle,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR508,M. bovis,SRR7617435,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR509,M. bovis,SRR7617432,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR510,M. bovis,SRR7617433,Cattle,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR512,M. bovis,SRR7617436,Cattle,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR514,M. bovis,SRR7617437,Cattle,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR518,M. bovis,SRR7617798,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR521,M. bovis,SRR7617801,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR524,M. bovis,SRR7617800,Cattle,New Zealand,2008,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR525,M. bovis,SRR7617803,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR530,M. bovis,SRR7617805,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR532,M. bovis,SRR7617804,Cattle,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR533,M. bovis,SRR7617807,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR534,M. bovis,SRR7617806,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR535,M. bovis,SRR7617658,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR540,M. bovis,SRR7617659,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR543,M. bovis,SRR7617660,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR546,M. bovis,SRR7617661,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR548,M. bovis,SRR7617654,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR554,M. bovis,SRR7617655,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR557,M. bovis,SRR7617657,Cattle,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR60575,M. bovis,SRR7617784,Cattle,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR711,M. bovis,SRR7617508,Cattle,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR712,M. bovis,SRR7617764,Cattle,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR715,M. bovis,SRR7617763,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2643 AgR716,M. bovis,SRR7617760,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR719,M. bovis,SRR7617759,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR720,M. bovis,SRR7617766,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR722,M. bovis,SRR7617617,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR723,M. bovis,SRR7617616,Cattle,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR725,M. bovis,SRR7617619,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR728,M. bovis,SRR7617612,Cattle,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR731,M. bovis,SRR7617621,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR732,M. bovis,SRR7617620,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR733,M. bovis,SRR7617534,Cattle,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR734,M. bovis,SRR7617535,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR735,M. bovis,SRR7617536,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR738,M. bovis,SRR7617530,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR739,M. bovis,SRR7617531,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR744,M. bovis,SRR7617683,Cattle,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR745,M. bovis,SRR7617682,Cattle,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 99-4301,M. bovis,SRR7240213,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 99-4216,M. bovis,SRR7240212,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-4165,M. bovis,SRR7240215,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 99-4149,M. bovis,SRR7240214,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 99-3664,M. bovis,SRR7240498,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-3426,M. bovis,SRR7240487,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-3419,M. bovis,SRR7240211,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 99-3013,M. bovis,SRR7240210,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 99-2729,M. bovis,SRR7240039,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2566 99-2728,M. bovis,SRR7240036,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2566 99-2553,M. bovis,SRR7240037,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-2505,M. bovis,SRR7240034,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-2503,M. bovis,SRR7240035,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-2042,M. bovis,SRR7240360,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-2038,M. bovis,SRR7240362,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-1993,M. bovis,SRR1792504,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-1691,M. bovis,SRR7240030,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-0963,M. bovis,SRR7240315,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1348 99-0961,M. bovis,SRR7240305,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 99-0753,M. bovis,SRR7240378,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 99-0360,M. bovis,SRR7240377,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0358,M. bovis,SRR7240376,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0343,M. bovis,SRR7240375,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0342,M. bovis,SRR7240017,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0341,M. bovis,SRR7240016,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0339,M. bovis,SRR7240361,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0338,M. bovis,SRR7240543,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0337,M. bovis,SRR7240508,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0336,M. bovis,SRR7240509,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0334,M. bovis,SRR7240500,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 99-0272,M. bovis,SRR7240501,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 99-0262,M. bovis,SRR7240503,Cattle,USA,1999,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1247 98-3851,M. bovis,SRR7240504,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2577 98-3480,M. bovis,SRR7240505,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 98-2325,M. bovis,SRR7240507,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 98-1473,M. bovis,SRR7240193,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 98-1218,M. bovis,SRR7240453,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 98-0468,M. bovis,SRR7240541,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 98-0368,M. bovis,SRR7240458,Cattle,USA,1998,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 97-3476,M. bovis,SRR7240071,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 97-2754,M. bovis,SRR7240067,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 97-2516,M. bovis,SRR1792494,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 97-2502,M. bovis,SRR7240441,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2606 97-2128,M. bovis,SRR7240440,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 97-1903,M. bovis,SRR7240450,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 97-1662,M. bovis,SRR7240447,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 97-0405,M. bovis,SRR7240445,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 97-0323,M. bovis,SRR7240444,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 97-0101,M. bovis,SRR7240371,Cattle,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-3217,M. bovis,SRR7240540,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 96-3104,M. bovis,SRR7240542,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 96-3086,M. bovis,SRR7240539,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-3080,M. bovis,SRR7240283,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-3067,M. bovis,SRR7240286,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-3037,M. bovis,SRR7240526,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 96-2942,M. bovis,SRR7240527,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-2923,M. bovis,SRR7240196,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 96-2886,M. bovis,SRR7240195,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-2866,M. bovis,SRR7240282,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 96-2828,M. bovis,SRR7240181,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1531 96-2752,M. bovis,SRR7240476,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1531 96-2467,M. bovis,SRR7240177,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 96-2422,M. bovis,SRR7240180,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 96-2421,M. bovis,SRR7240179,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 96-2217,M. bovis,SRR7240533,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 96-1580,M. bovis,SRR7240534,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2571 96-1527,M. bovis,SRR7240535,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 96-1371,M. bovis,SRR7240528,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1754 96-1245,M. bovis,SRR7240530,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-0884,M. bovis,SRR7240531,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2575 96-0673,M. bovis,SRR7240404,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 96-0456,M. bovis,SRR7240403,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 96-0084,M. bovis,SRR7240398,Cattle,USA,1996,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 95-3962,M. bovis,SRR7240396,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2014 95-3943,M. bovis,SRR7240395,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-3417,M. bovis,SRR7240400,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-3119,M. bovis,SRR7240399,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-3118,M. bovis,SRR7240318,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-3070,M. bovis,SRR7240319,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 95-3044,M. bovis,SRR7240322,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 95-3029,M. bovis,SRR7240323,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 95-3010,M. bovis,SRR7240320,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-2914,M. bovis,SRR7240321,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2012 95-2911,M. bovis,SRR7240326,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2012 95-2898,M. bovis,SRR7240327,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 95-2823,M. bovis,SRR7240324,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-2672,M. bovis,SRR7240157,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2053 95-2450,M. bovis,SRR7240156,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-2449,M. bovis,SRR7240159,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-2382,M. bovis,SRR7240158,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2581 95-2381,M. bovis,SRR7240161,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-2310,M. bovis,SRR7240160,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-2114,M. bovis,SRR7240163,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 95-1734,M. bovis,SRR7240165,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 95-1689,M. bovis,SRR7240164,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-1589,M. bovis,SRR7240290,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 95-1328,M. bovis,SRR7240289,Cattle,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-5850,M. bovis,SRR7240300,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-5783,M. bovis,SRR7240299,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 94-5673,M. bovis,SRR7240302,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-5053,M. bovis,SRR1792487,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0130 94-4852,M. bovis,SRR7240301,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-4604,M. bovis,SRR7240296,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 94-4508,M. bovis,SRR7240295,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-3152,M. bovis,SRR7240419,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0130 94-2476,M. bovis,SRR7240427,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 94-2328,M. bovis,SRR7240425,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 94-2155,M. bovis,SRR7240426,Cattle,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-6219,M. bovis,SRR7240423,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-4406,M. bovis,SRR7240424,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 93-3021,M. bovis,SRR7240421,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 93-2409,M. bovis,SRR7240422,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-2304,M. bovis,SRR7240050,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-2248,M. bovis,SRR7240049,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-2159,M. bovis,SRR7240043,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 93-2054,M. bovis,SRR7240042,Cattle,USA,1993,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-6735,M. bovis,SRR7240041,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-5548,M. bovis,SRR7240047,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0486 92-5278,M. bovis,SRR7240046,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1071 92-5142,M. bovis,SRR7240044,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-5135,M. bovis,SRR7240208,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 92-5113,M. bovis,SRR7240209,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1216 92-4618,M. bovis,SRR7240204,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-3392,M. bovis,SRR7240205,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-3345,M. bovis,SRR7240206,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 92-3342,M. bovis,SRR7240207,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 92-3196,M. bovis,SRR7240200,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 92-2645,M. bovis,SRR7240201,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 92-2140,M. bovis,SRR7240202,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 92-0392,M. bovis,SRR7240386,Cattle,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 91-4712,M. bovis,SRR7240385,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 91-4521,M. bovis,SRR7240388,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 91-4225,M. bovis,SRR7240389,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 91-4216,M. bovis,SRR7240392,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 91-4017,M. bovis,SRR7240391,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 91-3135,M. bovis,SRR7240393,Cattle,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 90-3396,M. bovis,SRR7240442,Cattle,USA,1990,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 90-2920,M. bovis,SRR7240457,Cattle,USA,1990,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 90-0620,M. bovis,SRR7240518,Cattle,USA,1990,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2569 18-1932,M. bovis,SRR7240695,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1930,M. bovis,SRR7240694,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1927,M. bovis,SRR7240697,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1922,M. bovis,SRR7240696,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1919,M. bovis,SRR7240699,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1904,M. bovis,SRR7240698,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-1008,M. bovis,SRR7240519,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 18-0522,M. bovis,SRR7240285,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 18-0296,M. bovis,SRR7240284,Cattle,USA,2018,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-7358,M. bovis,SRR7240155,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6641,M. bovis,SRR7240314,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6639,M. bovis,SRR7240153,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6638,M. bovis,SRR7240152,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6637,M. bovis,SRR7240151,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6636,M. bovis,SRR7240150,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6635,M. bovis,SRR7240304,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6634,M. bovis,SRR7240303,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6633,M. bovis,SRR7240316,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6632,M. bovis,SRR7240317,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6631,M. bovis,SRR7240306,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6630,M. bovis,SRR7240307,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6629,M. bovis,SRR7240308,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6628,M. bovis,SRR7240309,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6627,M. bovis,SRR7240310,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6626,M. bovis,SRR7240311,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6262,M. bovis,SRR7240312,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6256,M. bovis,SRR7240313,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-6243,M. bovis,SRR7240438,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-5714,M. bovis,SRR7240437,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-4120,M. bovis,SRR7240433,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-4119,M. bovis,SRR7240436,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3994,M. bovis,SRR7240435,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 17-3985,M. bovis,SRR7240430,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3558,M. bovis,SRR7240429,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3278,M. bovis,SRR7240339,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3209,M. bovis,SRR7240061,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3208,M. bovis,SRR7240058,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3207,M. bovis,SRR7240059,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3206,M. bovis,SRR7240056,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3205,M. bovis,SRR7240057,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3203,M. bovis,SRR7240054,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3202,M. bovis,SRR7240055,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3194,M. bovis,SRR7240053,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3161,M. bovis,SRR7240222,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3160,M. bovis,SRR7240223,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3159,M. bovis,SRR7240224,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3158,M. bovis,SRR7240225,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3157,M. bovis,SRR7240226,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3155,M. bovis,SRR7240227,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3154,M. bovis,SRR7240228,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3153,M. bovis,SRR7240229,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3152,M. bovis,SRR7240230,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3151,M. bovis,SRR7240231,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3150,M. bovis,SRR7240082,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3149,M. bovis,SRR7240081,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-3101,M. bovis,SRR7240080,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3100,M. bovis,SRR7240079,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3099,M. bovis,SRR7240078,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3098,M. bovis,SRR7240077,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3095,M. bovis,SRR7240076,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3015,M. bovis,SRR7240075,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3014,M. bovis,SRR7240074,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3013,M. bovis,SRR7240073,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3010,M. bovis,SRR7240087,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-3009,M. bovis,SRR7240088,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2701,M. bovis,SRR7240093,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2699,M. bovis,SRR7240094,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2697,M. bovis,SRR7240091,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2695,M. bovis,SRR7240092,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2686,M. bovis,SRR7240097,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2684,M. bovis,SRR7240098,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2683,M. bovis,SRR7240095,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-2236,M. bovis,SRR7240471,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-2232,M. bovis,SRR7240470,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-2231,M. bovis,SRR7240473,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-2079,M. bovis,SRR7240472,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 17-1955,M. bovis,SRR7240062,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-1949,M. bovis,SRR7240060,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-1449,M. bovis,SRR7240154,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 17-13300,M. bovis,SRR7240166,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-13100,M. bovis,SRR7240291,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-13099,M. bovis,SRR7240292,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-13098,M. bovis,SRR7240293,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-13006,M. bovis,SRR7240288,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12843,M. bovis,SRR7240032,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12841,M. bovis,SRR7240139,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12837,M. bovis,SRR7240138,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12752,M. bovis,SRR7240133,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12751,M. bovis,SRR7240132,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12750,M. bovis,SRR7240131,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12749,M. bovis,SRR7240130,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12748,M. bovis,SRR7240137,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12747,M. bovis,SRR7240136,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12745,M. bovis,SRR7240135,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12744,M. bovis,SRR7240134,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12741,M. bovis,SRR7240148,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12740,M. bovis,SRR7240149,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12739,M. bovis,SRR7240146,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12665,M. bovis,SRR7240144,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 17-12646,M. bovis,SRR7240145,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12644,M. bovis,SRR7240142,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12643,M. bovis,SRR7240143,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12642,M. bovis,SRR7240140,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12641,M. bovis,SRR7240141,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12640,M. bovis,SRR7240521,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12616,M. bovis,SRR7240520,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12615,M. bovis,SRR7240515,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12613,M. bovis,SRR7240514,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12612,M. bovis,SRR7240517,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12610,M. bovis,SRR7240516,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12609,M. bovis,SRR7240511,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12608,M. bovis,SRR7240510,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-12607,M. bovis,SRR7240513,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11614,M. bovis,SRR7240119,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11613,M. bovis,SRR7240379,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11610,M. bovis,SRR7240380,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11609,M. bovis,SRR7240381,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11608,M. bovis,SRR7240382,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11606,M. bovis,SRR7240383,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-11604,M. bovis,SRR7240384,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-10813,M. bovis,SRR7240100,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 17-0131,M. bovis,SRR7240233,Cattle,USA,2017,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 16-8243,M. bovis,SRR7240242,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 16-7474,M. bovis,SRR7240241,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 16-6925,M. bovis,SRR7240105,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 16-6514,M. bovis,SRR7240104,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 16-5880,M. bovis,SRR7240110,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 16-5412,M. bovis,SRR7240109,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 16-4148,M. bovis,SRR7240108,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 16-2393,M. bovis,SRR7240084,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 16-1707,M. bovis,SRR7240236,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 16-1661,M. bovis,SRR7240237,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 16-1464,M. bovis,SRR7240234,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 16-1383,M. bovis,SRR7240235,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 16-1010,M. bovis,SRR7240258,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 16-0285,M. bovis,SRR7240259,Cattle,USA,2016,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2100 15-4627,M. bovis,SRR7240330,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4626,M. bovis,SRR7240329,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4625,M. bovis,SRR7240338,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4624,M. bovis,SRR7240337,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4623,M. bovis,SRR7240336,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4622,M. bovis,SRR7240335,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4621,M. bovis,SRR7240334,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4620,M. bovis,SRR7240333,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4619,M. bovis,SRR7240332,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4618,M. bovis,SRR7240331,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4617,M. bovis,SRR7240474,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4616,M. bovis,SRR7240475,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4615,M. bovis,SRR7240460,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4614,M. bovis,SRR7240461,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4613,M. bovis,SRR7240462,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4222,M. bovis,SRR7240463,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4218,M. bovis,SRR7240464,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4217,M. bovis,SRR7240465,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4216,M. bovis,SRR7240466,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4215,M. bovis,SRR7240467,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4214,M. bovis,SRR7240545,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4213,M. bovis,SRR7240544,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-4212,M. bovis,SRR7240547,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3709,M. bovis,SRR7240546,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-3300,M. bovis,SRR7240549,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3299,M. bovis,SRR7240548,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3298,M. bovis,SRR7240551,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3297,M. bovis,SRR7240550,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3296,M. bovis,SRR7240015,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3295,M. bovis,SRR7240014,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3294,M. bovis,SRR7240167,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3293,M. bovis,SRR7240168,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3292,M. bovis,SRR7240171,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3205,M. bovis,SRR7240172,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-3055,M. bovis,SRR7240169,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2806,M. bovis,SRR7240170,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 15-2645,M. bovis,SRR7240175,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2643,M. bovis,SRR7240176,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2641,M. bovis,SRR7240173,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2623,M. bovis,SRR7240174,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2617,M. bovis,SRR7240198,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-2372,M. bovis,SRR7240197,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,New pattern 15-2200,M. bovis,SRR7240218,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-1503,M. bovis,SRR7240217,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-1433,M. bovis,SRR7240216,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-1244,M. bovis,SRR7240194,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0884,M. bovis,SRR7240199,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0602,M. bovis,SRR7240221,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 15-0435,M. bovis,SRR7240220,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-0434,M. bovis,SRR7240373,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 15-0209,M. bovis,SRR7240374,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0018,M. bovis,SRR7240367,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0017,M. bovis,SRR7240368,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0016,M. bovis,SRR7240369,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0015,M. bovis,SRR7240370,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0014,M. bovis,SRR7240363,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0013,M. bovis,SRR7240364,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0012,M. bovis,SRR7240365,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0011,M. bovis,SRR7240366,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0010,M. bovis,SRR7240410,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0009,M. bovis,SRR7240409,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0008,M. bovis,SRR7240414,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0007,M. bovis,SRR7240413,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0006,M. bovis,SRR7240412,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0005,M. bovis,SRR7240411,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0004,M. bovis,SRR7240418,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 15-0003,M. bovis,SRR7240417,Cattle,USA,2015,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4322,M. bovis,SRR7240416,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4321,M. bovis,SRR7240415,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2576 14-4302,M. bovis,SRR7240268,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4301,M. bovis,SRR7240269,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4300,M. bovis,SRR7240264,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4298,M. bovis,SRR7240265,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4296,M. bovis,SRR7240266,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4295,M. bovis,SRR7240267,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4277,M. bovis,SRR7240260,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4276,M. bovis,SRR7240261,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4275,M. bovis,SRR7240262,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4274,M. bovis,SRR7240263,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4273,M. bovis,SRR7240273,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4272,M. bovis,SRR7240272,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4270,M. bovis,SRR7240275,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4268,M. bovis,SRR7240274,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4267,M. bovis,SRR7240277,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4266,M. bovis,SRR7240276,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4265,M. bovis,SRR7240279,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4264,M. bovis,SRR7240278,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4263,M. bovis,SRR7240281,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4262,M. bovis,SRR7240280,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-4253,M. bovis,SRR7240120,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-3592,M. bovis,SRR7240121,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 14-3461,M. bovis,SRR7240124,Cattle,USA,2014,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 13-8046,M. bovis,SRR1792450,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-7725,M. bovis,SRR1792448,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 13-7528,M. bovis,SRR1792447,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2588 13-7506,M. bovis,SRR1792446,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-6884,M. bovis,SRR1792443,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 13-6769,M. bovis,SRR1792442,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2607 13-6626,M. bovis,SRR1792441,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 13-5449,M. bovis,SRR1792435,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 13-4685,M. bovis,SRR1792432,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 13-3875,M. bovis,SRR1792422,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2573 13-3430,M. bovis,SRR1792421,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2941,M. bovis,SRR1792417,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2937,M. bovis,SRR1792416,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2934,M. bovis,SRR1792415,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2932,M. bovis,SRR1792414,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2929,M. bovis,SRR1792413,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-2826,M. bovis,SRR1792411,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2607 13-2442,M. bovis,SRR1792384,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-1616,M. bovis,SRR1792372,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,New pattern 13-1575,M. bovis,SRR1792371,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-1079,M. bovis,SRR1792369,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0962,M. bovis,SRR1792367,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0953,M. bovis,SRR1792366,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0949,M. bovis,SRR1792365,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0948,M. bovis,SRR1792364,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0926,M. bovis,SRR1792363,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 13-0902,M. bovis,SRR1792362,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0899,M. bovis,SRR1792361,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0896,M. bovis,SRR1792360,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0895,M. bovis,SRR1792359,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0550,M. bovis,SRR1792358,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 13-0549,M. bovis,SRR1792357,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 13-0443,M. bovis,SRR1792356,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,New pattern 13-0348,M. bovis,SRR1792355,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2007 13-0347,M. bovis,SRR1792354,Cattle,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-9906,M. bovis,SRR1792353,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 12-9259,M. bovis,SRR1792349,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-8656,M. bovis,SRR1792348,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-8178,M. bovis,SRR1792347,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 12-7404,M. bovis,SRR1792346,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 12-6818,M. bovis,SRR1792345,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-5216,M. bovis,SRR1792343,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 12-5103,M. bovis,SRR1792342,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-4832,M. bovis,SRR1792337,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-4696,M. bovis,SRR1792336,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-3660,M. bovis,SRR1792333,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-3012,M. bovis,SRR1792332,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-2164,M. bovis,SRR1792330,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 12-2163,M. bovis,SRR1792329,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 12-1874,M. bovis,SRR1792328,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 12-1601,M. bovis,SRR1792327,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-1278,M. bovis,SRR1792326,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0948,M. bovis,SRR1792322,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-0945,M. bovis,SRR1792321,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-0812,M. bovis,SRR1792320,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0560,M. bovis,SRR1792319,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-0257,M. bovis,SRR1792318,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0251,M. bovis,SRR1792317,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0241,M. bovis,SRR1792316,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0221,M. bovis,SRR1792315,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0217,M. bovis,SRR1792314,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0173,M. bovis,SRR1792313,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 12-0119,M. bovis,SRR1792312,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 12-0062,M. bovis,SRR1792311,Cattle,USA,2012,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-9307,M. bovis,SRR1792310,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 11-8359,M. bovis,SRR7240122,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-8257,M. bovis,SRR1792308,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1216 11-7945,M. bovis,SRR1792307,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 11-7341,M. bovis,SRR1792305,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 11-7165,M. bovis,SRR1792304,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-7164,M. bovis,SRR1792303,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-7163,M. bovis,SRR1792302,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-7162,M. bovis,SRR1792301,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-6826,M. bovis,SRR1792300,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-6825,M. bovis,SRR1792299,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-6824,M. bovis,SRR1792298,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-6788,M. bovis,SRR7240123,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 11-5716,M. bovis,SRR1792297,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-5713,M. bovis,SRR1792296,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 11-5500,M. bovis,SRR1792294,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-5424,M. bovis,SRR1792291,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-5035,M. bovis,SRR1792287,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 11-4782,M. bovis,SRR1792286,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 11-3871,M. bovis,SRR1792283,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 11-3558,M. bovis,SRR1792281,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 11-2607,M. bovis,SRR1792280,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 11-1686,M. bovis,SRR1792279,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0267 11-1673,M. bovis,SRR1792278,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 11-1557,M. bovis,SRR1792277,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 11-0787,M. bovis,SRR1792276,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 11-0766,M. bovis,SRR1792275,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 11-0719,M. bovis,SRR1792274,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 11-0187,M. bovis,SRR1792273,Cattle,USA,2011,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-9487,M. bovis,SRR7240128,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-9486,M. bovis,SRR7240129,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-8952,M. bovis,SRR1792270,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-8841,M. bovis,SRR1792269,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2014 10-7916,M. bovis,SRR7240126,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-7911,M. bovis,SRR1792268,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-6807,M. bovis,SRR1792260,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-6201,M. bovis,SRR1792259,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 10-5035,M. bovis,SRR1792254,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2011 10-4190,M. bovis,SRR1792250,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 10-2758,M. bovis,SRR1792248,Cattle,USA,2010,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 09-9272,M. bovis,SRR1792241,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 09-7382,M. bovis,SRR1792240,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 09-5743,M. bovis,SRR1792202,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 09-5189,M. bovis,SRR1792198,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 09-5188,M. bovis,SRR1792197,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 09-5187,M. bovis,SRR1792196,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 09-5050,M. bovis,SRR1792195,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 09-5047,M. bovis,SRR1792194,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 09-3328,M. bovis,SRR1792175,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1758 09-3257,M. bovis,SRR1792174,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 09-2111,M. bovis,SRR1792172,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1348 09-1465,M. bovis,SRR1792170,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 09-0739,M. bovis,SRR1792169,Cattle,USA,2009,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-8902,M. bovis,SRR1792162,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 08-7119,M. bovis,SRR1792158,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-6606,M. bovis,SRR1792156,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 08-6018,M. bovis,SRR1792154,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-5820,M. bovis,SRR1792153,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-5467,M. bovis,SRR1792151,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-5466,M. bovis,SRR1792150,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-5295,M. bovis,SRR1792148,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-5055,M. bovis,SRR7240480,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 08-4524,M. bovis,SRR1792139,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4523,M. bovis,SRR1792138,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4522,M. bovis,SRR1792137,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4521,M. bovis,SRR1792136,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4520,M. bovis,SRR1792135,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4519,M. bovis,SRR1792134,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4518,M. bovis,SRR1792133,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4517,M. bovis,SRR1792132,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4516,M. bovis,SRR1792131,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4515,M. bovis,SRR1792130,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4514,M. bovis,SRR1792129,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4513,M. bovis,SRR1792128,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4512,M. bovis,SRR1792127,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4497,M. bovis,SRR1792126,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-4496,M. bovis,SRR1792125,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 08-3549,M. bovis,SRR1792120,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 08-2771,M. bovis,SRR1792117,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 08-2614,M. bovis,SRR1792113,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-1137,M. bovis,SRR1792099,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-0533,M. bovis,SRR1792093,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-0532,M. bovis,SRR1792092,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 08-0531,M. bovis,SRR1792091,Cattle,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9879,M. bovis,SRR1792087,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9846,M. bovis,SRR1792086,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9692,M. bovis,SRR1792085,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9689,M. bovis,SRR1792084,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9684,M. bovis,SRR1792083,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9683,M. bovis,SRR1792082,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-9331,M. bovis,SRR1792081,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-8997,M. bovis,SRR1792080,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-8626,M. bovis,SRR1792079,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-8467,M. bovis,SRR1792078,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-7606,M. bovis,SRR1792075,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-7431,M. bovis,SRR1792074,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-7143,M. bovis,SRR1792072,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-7140,M. bovis,SRR1792071,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 07-6003,M. bovis,SRR1792066,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-5844,M. bovis,SRR1792065,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1216 07-5817,M. bovis,SRR1792064,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 07-5810,M. bovis,SRR1792063,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 07-5683,M. bovis,SRR1792060,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-4628,M. bovis,SRR1792052,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2012 07-4480,M. bovis,SRR1792051,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-3041,M. bovis,SRR7240478,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 07-2063,M. bovis,SRR1792047,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 07-1682,M. bovis,SRR1792046,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1216 07-1437,M. bovis,SRR1792045,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 07-10012,M. bovis,SRR1792040,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 07-0676,M. bovis,SRR1792039,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0986 07-0554,M. bovis,SRR1792036,Cattle,USA,2007,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 06-9741,M. bovis,SRR1792035,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-9653,M. bovis,SRR1792034,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 06-9596,M. bovis,SRR1792033,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-9164,M. bovis,SRR1792031,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-9163,M. bovis,SRR1792030,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-8716,M. bovis,SRR1792029,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-8591,M. bovis,SRR1792028,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 06-8427,M. bovis,SRR1792026,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 06-6079,M. bovis,SRR1792020,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 06-5439,M. bovis,SRR1792017,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1757 06-5345,M. bovis,SRR1792016,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-4904,M. bovis,SRR1792015,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 06-4348,M. bovis,SRR1792013,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-3430,M. bovis,SRR1792008,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1757 06-2548,M. bovis,SRR1792003,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-1916,M. bovis,SRR1792001,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 06-1754,M. bovis,SRR1791998,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 06-10979,M. bovis,SRR7240477,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0271 06-10887,M. bovis,SRR1791993,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-10886,M. bovis,SRR1791992,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-10884,M. bovis,SRR1791991,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-10883,M. bovis,SRR1791990,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-10752,M. bovis,SRR1791989,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 06-0661,M. bovis,SRR1791987,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 06-0165,M. bovis,SRR7240358,Cattle,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-9659,M. bovis,SRR1791978,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-9563,M. bovis,SRR1791977,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-9220,M. bovis,SRR1791975,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-9219,M. bovis,SRR1791974,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-9215,M. bovis,SRR1791973,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-8966,M. bovis,SRR1791972,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-8963,M. bovis,SRR1791971,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-8628,M. bovis,SRR1791970,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-8434,M. bovis,SRR1791968,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-7939,M. bovis,SRR1791966,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-7512,M. bovis,SRR1791965,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-7510,M. bovis,SRR1791964,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-7509,M. bovis,SRR1791963,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-7325,M. bovis,SRR1791962,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-7231,M. bovis,SRR1791961,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-6326,M. bovis,SRR1791958,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-6134,M. bovis,SRR1791957,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-6101,M. bovis,SRR1791956,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 05-5935,M. bovis,SRR1791955,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 05-5649,M. bovis,SRR1791954,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 05-5591,M. bovis,SRR1791953,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-5501,M. bovis,SRR1791952,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 05-5159,M. bovis,SRR1791951,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-4707,M. bovis,SRR1791949,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 05-4451,M. bovis,SRR1791948,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-3214,M. bovis,SRR1791945,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 05-3100,M. bovis,SRR1791944,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-2592,M. bovis,SRR1791943,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-1687,M. bovis,SRR1791942,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 05-1686,M. bovis,SRR1791941,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 05-1568,M. bovis,SRR1791939,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 05-1385,M. bovis,SRR1791938,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 05-1365,M. bovis,SRR1791937,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0269 05-1239,M. bovis,SRR1791936,Cattle,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1745 04-8948,M. bovis,SRR1791934,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-8419,M. bovis,SRR1791933,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2014 04-8337,M. bovis,SRR1791932,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-8012,M. bovis,SRR1791928,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1502 04-7553,M. bovis,SRR1791927,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 04-7366,M. bovis,SRR1791926,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 04-7038,M. bovis,SRR1791924,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-7017,M. bovis,SRR1791923,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 04-6402,M. bovis,SRR1791922,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-6401,M. bovis,SRR1791921,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-6310,M. bovis,SRR1791920,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-6082,M. bovis,SRR1791919,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5676,M. bovis,SRR1791918,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5618,M. bovis,SRR1791917,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5391,M. bovis,SRR1791916,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5382,M. bovis,SRR1791915,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5337,M. bovis,SRR1791914,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-5090,M. bovis,SRR1791913,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 04-3251,M. bovis,SRR7240351,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-2676,M. bovis,SRR1791911,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1758 04-2177,M. bovis,SRR7240352,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 04-2067,M. bovis,SRR1791906,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-2019,M. bovis,SRR1791905,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-1688,M. bovis,SRR1791901,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 04-1382,M. bovis,SRR1791900,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 04-0105,M. bovis,SRR1791893,Cattle,USA,2004,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-6776,M. bovis,SRR1791892,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-6018,M. bovis,SRR1791890,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-5416,M. bovis,SRR1791888,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 03-5025,M. bovis,SRR1791885,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-4556,M. bovis,SRR1791884,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 03-4434,M. bovis,SRR1791883,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-4227,M. bovis,SRR1791882,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-4181,M. bovis,SRR1791881,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-3701,M. bovis,SRR1791879,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-3568,M. bovis,SRR1791878,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 03-3386,M. bovis,SRR7240353,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-3339,M. bovis,SRR1791877,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-2766,M. bovis,SRR1791872,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-2704,M. bovis,SRR1791871,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0130 03-2120,M. bovis,SRR1791864,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-1926,M. bovis,SRR1791862,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-1917,M. bovis,SRR1791861,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 03-1766,M. bovis,SRR1791859,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 03-1031,M. bovis,SRR1791856,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0860,M. bovis,SRR1791855,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0703,M. bovis,SRR1791853,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0702,M. bovis,SRR1791852,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0701,M. bovis,SRR1791851,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0700,M. bovis,SRR1791850,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0666,M. bovis,SRR1791849,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0562,M. bovis,SRR1791848,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0453,M. bovis,SRR1791847,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 03-0431,M. bovis,SRR1791846,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0430,M. bovis,SRR1791845,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0429,M. bovis,SRR1791844,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0425,M. bovis,SRR1791843,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 03-0280,M. bovis,SRR1791842,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 03-0196,M. bovis,SRR1791840,Cattle,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6432,M. bovis,SRR7240348,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6431,M. bovis,SRR1791837,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6430,M. bovis,SRR1791836,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6429,M. bovis,SRR1791835,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6427,M. bovis,SRR1791834,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 02-6426,M. bovis,SRR1791833,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6281,M. bovis,SRR1791831,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6246,M. bovis,SRR1791829,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-6203,M. bovis,SRR1791827,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-6201,M. bovis,SRR1791826,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-5898,M. bovis,SRR1791823,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2644 02-5877,M. bovis,SRR1791822,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-5676,M. bovis,SRR1791821,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-5651,M. bovis,SRR1791820,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-5432,M. bovis,SRR7240345,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-5008,M. bovis,SRR1791816,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2020 02-4625,M. bovis,SRR1791815,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-4605,M. bovis,SRR7240347,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0130 02-4556,M. bovis,SRR1791814,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-4544,M. bovis,SRR1791813,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-4414,M. bovis,SRR1791811,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-4170,M. bovis,SRR1791808,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-3815,M. bovis,SRR1791807,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 02-3790,M. bovis,SRR1791806,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-3660,M. bovis,SRR1791805,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 02-3424,M. bovis,SRR7240341,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1753 02-3276,M. bovis,SRR1791801,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2020 02-3168,M. bovis,SRR1791800,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 02-3165,M. bovis,SRR1791799,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 02-3163,M. bovis,SRR7240340,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 02-3096,M. bovis,SRR1791798,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2578 02-2680,M. bovis,SRR1791796,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-2284,M. bovis,SRR1791794,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1943,M. bovis,SRR7240190,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1939,M. bovis,SRR7240191,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1839,M. bovis,SRR7240188,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1834,M. bovis,SRR7240189,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1831,M. bovis,SRR7240186,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1790,M. bovis,SRR1791792,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-1715,M. bovis,SRR1791791,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1699,M. bovis,SRR7240187,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1672,M. bovis,SRR1791790,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1654,M. bovis,SRR7240184,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 02-1644,M. bovis,SRR7240185,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1642,M. bovis,SRR7240182,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1641,M. bovis,SRR7240183,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1637,M. bovis,SRR7240027,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1589,M. bovis,SRR1791789,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1579,M. bovis,SRR1791788,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-1561,M. bovis,SRR1791787,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1559,M. bovis,SRR1791786,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1531,M. bovis,SRR1791785,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-1465,M. bovis,SRR1791784,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1071 02-1464,M. bovis,SRR1791783,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1463,M. bovis,SRR1791782,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1405,M. bovis,SRR1791781,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1370,M. bovis,SRR1791779,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 02-1368,M. bovis,SRR1791778,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-1331,M. bovis,SRR1791777,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0943 02-0690,M. bovis,SRR1791774,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-0585,M. bovis,SRR1791773,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-0493,M. bovis,SRR1791770,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0130 02-0419,M. bovis,SRR1791769,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-0394,M. bovis,SRR7240021,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-0357,M. bovis,SRR1791767,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0986 02-0309,M. bovis,SRR1791766,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0307 02-0302,M. bovis,SRR1791765,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1757 02-0253,M. bovis,SRR1791763,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2601 02-0252,M. bovis,SRR1791762,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 02-0175,M. bovis,SRR7240020,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 02-0011,M. bovis,SRR1791761,Cattle,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6428,M. bovis,SRR1791760,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 01-6410,M. bovis,SRR1791759,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 01-6318,M. bovis,SRR1791758,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6184,M. bovis,SRR7240019,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6168,M. bovis,SRR1791756,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 01-6106,M. bovis,SRR1791755,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6032,M. bovis,SRR7240018,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6031,M. bovis,SRR7240025,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-6030,M. bovis,SRR7240024,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5952,M. bovis,SRR7240023,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5951,M. bovis,SRR7240022,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5950,M. bovis,SRR1791754,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,New pattern 01-5948,M. bovis,SRR7240497,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5947,M. bovis,SRR7240496,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5946,M. bovis,SRR7240495,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5945,M. bovis,SRR7240494,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5862,M. bovis,SRR7240493,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5745,M. bovis,SRR1791752,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2629 01-5694,M. bovis,SRR1791751,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 01-5648,M. bovis,SRR1791750,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5647,M. bovis,SRR1791749,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5640,M. bovis,SRR1791748,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5639,M. bovis,SRR1791747,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5518,M. bovis,SRR1791746,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 01-5441,M. bovis,SRR1791745,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 01-5389,M. bovis,SRR1791744,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5367,M. bovis,SRR1791743,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-5243,M. bovis,SRR1791742,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1750 01-5127,M. bovis,SRR1791741,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-4726,M. bovis,SRR1791740,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2566 01-4577,M. bovis,SRR1791739,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0971 01-4283,M. bovis,SRR1791737,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 01-4282,M. bovis,SRR7240491,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 01-4106,M. bovis,SRR1791735,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-4049,M. bovis,SRR7240490,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1040 01-4048,M. bovis,SRR1791734,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-3906,M. bovis,SRR1791732,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-3568,M. bovis,SRR1791729,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-3442,M. bovis,SRR1791728,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 01-3302,M. bovis,SRR1791727,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0327 01-3240,M. bovis,SRR1791726,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-3176,M. bovis,SRR1791725,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-2934,M. bovis,SRR1791724,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-2757,M. bovis,SRR1791723,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1216 01-2736,M. bovis,SRR7240489,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 01-2536,M. bovis,SRR1791720,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-2486,M. bovis,SRR1791717,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-2374,M. bovis,SRR1791715,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 01-2185,M. bovis,SRR1791713,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-2011,M. bovis,SRR7240488,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB2374 01-1920,M. bovis,SRR1791709,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-1473,M. bovis,SRR1791706,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-1360,M. bovis,SRR1791705,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 01-0865,M. bovis,SRR1791704,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-0843,M. bovis,SRR1791703,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-0467,M. bovis,SRR1791702,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-0423,M. bovis,SRR1791701,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 01-0050,M. bovis,SRR1791700,Cattle,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1499 00-4177,M. bovis,SRR1791697,Cattle,USA,2000,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 00-3692,M. bovis,SRR1791695,Cattle,USA,2000,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 15-4492,M. bovis,SRR5657514,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4493,M. bovis,SRR5657519,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4494,M. bovis,SRR5657518,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0971 15-4495,M. bovis,SRR5657424,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4496,M. bovis,SRR5657427,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4497,M. bovis,SRR5657492,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4498,M. bovis,SRR5657404,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4499,M. bovis,SRR5657426,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4500,M. bovis,SRR5657453,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4501,M. bovis,SRR5657454,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4502,M. bovis,SRR5657451,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4503,M. bovis,SRR5657452,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4504,M. bovis,SRR5657457,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4505,M. bovis,SRR5657458,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4506,M. bovis,SRR5657455,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4507,M. bovis,SRR5657493,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4508,M. bovis,SRR5657459,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4509,M. bovis,SRR5657494,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4510,M. bovis,SRR5657405,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4512,M. bovis,SRR5657460,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-4513,M. bovis,SRR5657417,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4514,M. bovis,SRR5657416,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-4515,M. bovis,SRR5657495,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0162 15-4516,M. bovis,SRR5657488,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0162 15-5478,M. bovis,SRR5657456,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5479,M. bovis,SRR5657414,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5480,M. bovis,SRR5657413,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5481,M. bovis,SRR5657412,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5482,M. bovis,SRR5657411,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5494,M. bovis,SRR5657475,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5495,M. bovis,SRR5657489,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5496,M. bovis,SRR5657402,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5497,M. bovis,SRR5657490,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5498,M. bovis,SRR5657439,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5513,M. bovis,SRR5657491,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0162 15-5514,M. bovis,SRR5657496,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5515,M. bovis,SRR5657497,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5520,M. bovis,SRR5657438,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5521,M. bovis,SRR5657462,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5522,M. bovis,SRR5657384,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5523,M. bovis,SRR5657383,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5629,M. bovis,SRR5657463,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5630,M. bovis,SRR5657386,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5631,M. bovis,SRR5657370,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5632,M. bovis,SRR5657371,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5633,M. bovis,SRR5657385,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5634,M. bovis,SRR5657466,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5635,M. bovis,SRR5657380,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5636,M. bovis,SRR5657379,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5637,M. bovis,SRR5657467,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5648,M. bovis,SRR5657382,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5649,M. bovis,SRR5657468,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5650,M. bovis,SRR5657381,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5651,M. bovis,SRR5657377,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5652,M. bovis,SRR5657376,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5653,M. bovis,SRR5657469,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5670,M. bovis,SRR5657470,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5672,M. bovis,SRR5657368,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5673,M. bovis,SRR5657369,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5674,M. bovis,SRR5657471,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5737,M. bovis,SRR5657506,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5738,M. bovis,SRR5657366,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5739,M. bovis,SRR5657505,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5740,M. bovis,SRR5657508,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5776,M. bovis,SRR5657507,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5777,M. bovis,SRR5657367,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5778,M. bovis,SRR5657364,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5780,M. bovis,SRR5657502,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5781,M. bovis,SRR5657501,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5782,M. bovis,SRR5657362,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5783,M. bovis,SRR5657504,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB2468 15-5784,M. bovis,SRR5657503,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5785,M. bovis,SRR5657500,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5786,M. bovis,SRR5657499,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 15-5787,M. bovis,SRR5657528,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 15-5791,M. bovis,SRR5657365,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0230,M. bovis,SRR5657363,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1760 16-0231,M. bovis,SRR5657360,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0232,M. bovis,SRR5657529,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0233,M. bovis,SRR5657526,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0234,M. bovis,SRR5657527,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0235,M. bovis,SRR5657524,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0236,M. bovis,SRR5657525,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0237,M. bovis,SRR5657522,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0335,M. bovis,SRR5657523,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0336,M. bovis,SRR5657361,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1758 16-0337,M. bovis,SRR5657520,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0338,M. bovis,SRR5657521,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1758 16-0339,M. bovis,SRR5657373,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0340,M. bovis,SRR5657498,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0341,M. bovis,SRR5657450,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0342,M. bovis,SRR5657415,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0343,M. bovis,SRR5657435,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0344,M. bovis,SRR5657434,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0345,M. bovis,SRR5657433,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0346,M. bovis,SRR5657432,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0347,M. bovis,SRR5657472,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0348,M. bovis,SRR5657487,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0349,M. bovis,SRR5657476,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0453,M. bovis,SRR5657461,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0454,M. bovis,SRR5657474,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0455,M. bovis,SRR5657473,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0456,M. bovis,SRR5657509,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0457,M. bovis,SRR5657387,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0458,M. bovis,SRR5657388,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0459,M. bovis,SRR5657406,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0460,M. bovis,SRR5657407,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0461,M. bovis,SRR5657389,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0462,M. bovis,SRR5657372,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0463,M. bovis,SRR5657374,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0464,M. bovis,SRR5657431,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0465,M. bovis,SRR5657430,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0466,M. bovis,SRR5657375,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0467,M. bovis,SRR5657378,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0582,M. bovis,SRR5657515,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0587,M. bovis,SRR5657429,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0588,M. bovis,SRR5657428,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0589,M. bovis,SRR5657437,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0590,M. bovis,SRR5657436,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0591,M. bovis,SRR5657403,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0593,M. bovis,SRR5657511,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0594,M. bovis,SRR5657510,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0595,M. bovis,SRR5657517,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0596,M. bovis,SRR5657516,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0712,M. bovis,SRR5657440,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0714,M. bovis,SRR5657441,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0715,M. bovis,SRR5657442,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0760,M. bovis,SRR5657443,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0761,M. bovis,SRR5657444,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0763,M. bovis,SRR5657445,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0764,M. bovis,SRR5657446,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0765,M. bovis,SRR5657447,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0768,M. bovis,SRR5657448,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0777,M. bovis,SRR5657449,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0918,M. bovis,SRR5657394,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0140 16-0919,M. bovis,SRR5657395,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0920,M. bovis,SRR5657396,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0921,M. bovis,SRR5657397,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0922,M. bovis,SRR5657390,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0327 16-0923,M. bovis,SRR5657391,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0327 16-0925,M. bovis,SRR5657392,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0928,M. bovis,SRR5657393,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0929,M. bovis,SRR5657398,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0930,M. bovis,SRR5657399,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0932,M. bovis,SRR5657419,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0933,M. bovis,SRR5657418,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0986 16-0936,M. bovis,SRR5657421,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0937,M. bovis,SRR5657420,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 16-0938,M. bovis,SRR5657423,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0939,M. bovis,SRR5657422,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 16-0940,M. bovis,SRR5657425,Cattle,Mexico,2015,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 ID06,M. bovis,ERR125601,Cattle,UK,1999,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID08,M. bovis,ERR125607,Cattle,UK,1999,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID10,M. bovis,ERR125605,Cattle,UK,2003,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID11,M. bovis,ERR125606,Cattle,UK,2004,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID12,M. bovis,ERR125598,Cattle,UK,2004,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID13,M. bovis,ERR125618,Cattle,UK,2007,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID14,M. bovis,ERR125614,Cattle,UK,2007,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID15,M. bovis,ERR125613,Cattle,UK,2007,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID16,M. bovis,ERR125611,Cattle,UK,2007,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID17,M. bovis,ERR125615,Cattle,UK,2008,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID18,M. bovis,ERR125612,Cattle,UK,2008,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID19,M. bovis,ERR125609,Cattle,UK,2008,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID20,M. bovis,ERR125617,Cattle,UK,2008,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID21,M. bovis,ERR125616,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID22,M. bovis,ERR125610,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID23,M. bovis,ERR125628,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID24,M. bovis,ERR125625,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID25,M. bovis,ERR125624,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID26,M. bovis,ERR125622,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID27,M. bovis,ERR125626,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID28,M. bovis,ERR125623,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID29,M. bovis,ERR125620,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID30,M. bovis,ERR125627,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID31,M. bovis,ERR125619,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 ID32,M. bovis,ERR125621,Cattle,UK,2010,23209404,Published,https://doi.org/10.1371/journal.ppat.1003008,SB0140 MbURU-023,M. bovis,SRR5431795,Cattle,Uruguay,2005,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-021,M. bovis,SRR5431793,Cattle,Uruguay,2010,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-020,M. bovis,SRR5431792,Cattle,Uruguay,2008,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0145 MbURU-019,M. bovis,SRR5431791,Cattle,Uruguay,2010,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0145 MbURU-018,M. bovis,SRR5431790,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 MbURU-017,M. bovis,SRR5431732,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 MbURU-015,M. bovis,SRR5431721,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-013,M. bovis,SRR5431720,Cattle,Uruguay,2013,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0145 MbURU-012,M. bovis,SRR5431718,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 MbURU-011,M. bovis,SRR5431711,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-010,M. bovis,SRR5430750,Cattle,Uruguay,2014,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 MbURU-009,M. bovis,SRR5430749,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-007,M. bovis,SRR5430747,Cattle,Uruguay,2014,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 MbURU-006,M. bovis,SRR5430746,Cattle,Uruguay,2014,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB1072 MbURU-005,M. bovis,SRR5430098,Cattle,Uruguay,2014,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0145 MbURU-004,M. bovis,SRR5430091,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0274 MbURU-003,M. bovis,SRR5430090,Cattle,Uruguay,2015,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0145 MbURU-002,M. bovis,SRR5430569,Cattle,Uruguay,2008,29291727,Published,https://doi.org/10.1186/s12864-017-4249-6,SB0130 10-1090_Deer 27,M. bovis,SRR1792244,Cervid,USA,2010,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-6718_Deer 25,M. bovis,SRR1792231,Cervid,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-5373_Deer 25,M. bovis,SRR1792199,Cervid,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-4592_Deer 26-LUNG,M. bovis,SRR1792192,Cervid,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 09-4591_Deer 26-LNTHX,M. bovis,SRR1792191,Cervid,USA,2009,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-5416_Deer 19,M. bovis,SRR1792149,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-4742_Deer 24-LN HD,M. bovis,SRR1792145,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-4741_Deer 24-LUNG,M. bovis,SRR1792144,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-4576_Deer 23,M. bovis,SRR1792143,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-4570_Deer 22,M. bovis,SRR1792142,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-4363_Deer 20,M. bovis,SRR1792123,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-3040_Deer 14,M. bovis,SRR1792119,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1812_Pooled Deer,M. bovis,SRR1792104,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1772_Deer 14,M. bovis,SRR1792103,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1624_Deer 16,M. bovis,SRR1792102,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-1021_Deer 18,M. bovis,SRR1792097,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-0864_Deer 17,M. bovis,SRR1792095,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 08-0863_Deer 15,M. bovis,SRR1792094,Cervid,USA,2008,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-7693_Deer 12,M. bovis,SRR1792076,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-6922_Deer 10,M. bovis,SRR1792070,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-6071_Deer 9,M. bovis,SRR1792067,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-5777_Deer 8-LNABD,M. bovis,SRR1792062,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-5776_Deer 8-LNTHX,M. bovis,SRR1792061,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-3280_Deer 6,M. bovis,SRR1792049,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-2555_Deer 7,M. bovis,SRR1792048,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-1366_Deer 5,M. bovis,SRR1792044,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 07-1287_Deer 3,M. bovis,SRR1792043,Cervid,USA,2007,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-3641_Deer 2-LNABD,M. bovis,SRR1792010,Cervid,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 06-3639_Deer 2-Carcass,M. bovis,SRR1792009,Cervid,USA,2006,26785113,Published,https://doi.org/10.1371/journal.pone.0145735,SB0271 99-56MIDNRdeerAlc,M. bovis,SRR8073615,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-53MIDNRdeerMontm,M. bovis,SRR8073617,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-35MIDNRdeerMontm-MI,M. bovis,SRR8073621,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-26MIDNRdeerMontm,M. bovis,SRR5817718,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-24MIDNRdeerAlc,M. bovis,SRR8073663,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-23MIDNRdeerMontm,M. bovis,SRR5817719,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-22MIDNRdeerAlc-1,M. bovis,SRR8073611,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-21MIDNRdeerAlc,M. bovis,SRR8073675,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-1MIDNRdeerMontm,M. bovis,SRR5817720,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-19MIDNRdeerAnt,M. bovis,SRR8073681,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-17MIDNRdeerOsco,M. bovis,SRR8073676,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 99-10MIDNRdeerMontm,M. bovis,SRR5817698,Cervid,USA,1999,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-80MIDNRdeerMontm,M. bovis,SRR8073616,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-66MIDNRdeerAlc,M. bovis,SRR8073612,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-5MIDNRdeerAlc-3,M. bovis,SRR8073651,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-5MIDNRdeerAlc-2,M. bovis,SRR8073680,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-54MIDNRdeerAlp,M. bovis,SRR8073679,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-38MIDNRdeerAlc,M. bovis,SRR8073648,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-30MIDNRdeerAlc,M. bovis,SRR8073653,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-29MIDNRdeerAlc,M. bovis,SRR8073620,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-24MIDNRdeerAlp-2,M. bovis,SRR8073618,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-20MIDNRdeerAlp,M. bovis,SRR8073664,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-16MIDNRdeerAlc,M. bovis,SRR8073647,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 98-11MIDNRdeerAlp-2,M. bovis,SRR8073614,Cervid,USA,1998,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-66MIDNRdeerOsco,M. bovis,SRR8073613,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-64MIDNRdeerPI,M. bovis,SRR5817697,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-61MIDNRdeerMontm,M. bovis,SRR8073652,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-60MIDNRdeerAlp,M. bovis,SRR8073654,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-57MIDNRdeerAlc,M. bovis,SRR8073629,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-55MIDNRdeerMontm,M. bovis,SRR8073630,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-54MIDNRdeerAlp-2,M. bovis,SRR8073619,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-52MIDNRdeerAlp-2,M. bovis,SRR8073622,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-51MIDNRdeerAlc-2,M. bovis,SRR8073625,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-49MIDNRdeerMontm,M. bovis,SRR8073626,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-46MIDNRdeerMontm,M. bovis,SRR8073623,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-3MIDNRdeerAlp,M. bovis,SRR8073624,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-33MIDNRdeerAlp,M. bovis,SRR8073678,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 97-22MIDNRdeerAlc,M. bovis,SRR8073677,Cervid,USA,1997,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-72MIDNRdeerOsco,M. bovis,SRR8073672,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-58MIDNRdeerAlc,M. bovis,SRR8073671,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-57MIDNRdeerAlc,M. bovis,SRR8073674,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-47MIDNRdeerMontm,M. bovis,SRR8073673,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-46MIDNRdeerAlc,M. bovis,SRR8073668,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-38MIDNRdeerAlp,M. bovis,SRR8073667,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-32MIDNRdeerAlp,M. bovis,SRR8073670,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 96-20MIDNRdeerAlp,M. bovis,SRR8073669,Cervid,USA,1996,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-6MIDNRdeerAlc,M. bovis,SRR8073649,Cervid,USA,2013,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-21MIDNRdeerMontm,M. bovis,SRR5817702,Cervid,USA,2013,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-20MIDNRdeerOsco,M. bovis,SRR8073650,Cervid,USA,2013,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-13MIDNRdeerPI,M. bovis,SRR5817701,Cervid,USA,2013,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-11MIDNRdeerOsco,M. bovis,SRR8073639,Cervid,USA,2013,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 08-7MIDNRdeerAlp,M. bovis,SRR8073640,Cervid,USA,2008,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 08-5MIDNRdeerMontm,M. bovis,SRR8073641,Cervid,USA,2008,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 08-4MIDNRdeerMontm,M. bovis,SRR8073642,Cervid,USA,2008,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 08-2MIDNRdeerOsco,M. bovis,SRR8073643,Cervid,USA,2008,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-9MIDNRdeerOsco,M. bovis,SRR5817705,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-7MIDNRdeerMontm-1,M. bovis,SRR5817704,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-6MIDNRdeerMontm,M. bovis,SRR5817703,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-30MIDNRdeerMontm,M. bovis,SRR5817672,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-28MIDNRdeerAlc,M. bovis,SRR8073644,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-1MIDNRdeerMontm-1,M. bovis,SRR8073645,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 07-13MIDNRdeerAlp,M. bovis,SRR8073646,Cervid,USA,2007,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 06-44MIDNRdeerAlp,M. bovis,SRR5817670,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 06-38MIDNRdeerOsco,M. bovis,SRR8073610,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 06-35MIDNRdeerAlp,M. bovis,SRR5817671,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 06-33MIDNRdeerMontm,M. bovis,SRR5817668,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 06-30MIDNRdeerAlp,M. bovis,SRR8073609,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 05-7MIDNRdeerAlc,M. bovis,SRR8073608,Cervid,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 05-4MIDNRdeerOsco,M. bovis,SRR8073607,Cervid,USA,2005,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-30MIDNRdeerMontm-3,M. bovis,SRR8073605,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-25MIDNRdeerPI,M. bovis,SRR5817716,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB2608 04-24MIDNRdeerMontm,M. bovis,SRR5817708,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-19MIDNRdeerPI,M. bovis,SRR5817707,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-13MIDNRdeerAlp,M. bovis,SRR8073604,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 04-10MIDNRdeerAlp,M. bovis,SRR8073603,Cervid,USA,2004,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-6MIDNRdeerAlp,M. bovis,SRR5817710,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-3MIDNRdeerMontm,M. bovis,SRR5817709,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-32MIDNRdeerMontm,M. bovis,SRR5817714,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-24MIDNRdeerPI,M. bovis,SRR5817713,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-20MIDNRdeerOsco,M. bovis,SRR5817676,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-10MIDNRdeerMontm,M. bovis,SRR5817677,Cervid,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 02-5MIDNRdeerAlc,M. bovis,SRR5817678,Cervid,USA,2002,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 02-3MIDNRdeerMontm,M. bovis,SRR5817679,Cervid,USA,2002,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-9MIDNRdeerAlc,M. bovis,SRR8073602,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-8MIDNRdeerAlp,M. bovis,SRR5817680,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-6MIDNRdeerOsco,M. bovis,SRR8073601,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-63MIDNRdeerAlc,M. bovis,SRR8073627,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-60MIDNRdeerAlp,M. bovis,SRR8073628,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-5MIDNRdeerOsco,M. bovis,SRR8073633,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-4MIDNRdeerMontm,M. bovis,SRR5817682,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-45MIDNRdeerPI,M. bovis,SRR5817683,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-44MIDNRdeerMontm,M. bovis,SRR5817684,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-43MIDNRdeerAlc,M. bovis,SRR8073634,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-40MIDNRdeerAlc,M. bovis,SRR8073631,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-39MIDNRdeerMontm,M. bovis,SRR5817685,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-38MIDNRdeerMontm,M. bovis,SRR5817686,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-34MIDNRdeerAlp,M. bovis,SRR8073632,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-32MIDNRdeerMontm,M. bovis,SRR8073637,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-20MIDNRdeerAlc,M. bovis,SRR8073638,Cervid,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-5MIDNRdeerOts,M. bovis,SRR5817687,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-53MIDNRdeerAlc,M. bovis,SRR8073665,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-51MIDNRdeerAlp,M. bovis,SRR8073666,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-48MIDNRdeerMontm,M. bovis,SRR5817691,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-47MIDNRdeerMontm,M. bovis,SRR8073655,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-43MIDNRdeerMontm,M. bovis,SRR5817688,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-3MIDNRdeerMontm,M. bovis,SRR8073656,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-33MIDNRdeerPI,M. bovis,SRR5817689,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-32MIDNRdeerOts,M. bovis,SRR5817694,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-2MIDNRdeerOsco,M. bovis,SRR8073657,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-29MIDNRdeerAlc,M. bovis,SRR8073658,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-28MIDNRdeerEmm,M. bovis,SRR8073659,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-27MIDNRdeerAlp,M. bovis,SRR5817695,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-26MIDNRdeerAlp,M. bovis,SRR8073660,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-25MIDNRdeerAlc,M. bovis,SRR8073661,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-21MIDNRdeerOts,M. bovis,SRR5817692,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0292 00-1MIDNRdeerAlc,M. bovis,SRR8073662,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-17MIDNRdeerMontm,M. bovis,SRR5817693,Cervid,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 13-11594,M. bovis,SRR10482964,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 14-MBovis,M. bovis,SRR10482955,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 15-11643,M. bovis,SRR10482939,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 17-11662,M. bovis,SRR10482953,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 17-MBovis,M. bovis,SRR10482952,Cervid,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 19-11957,M. bovis,SRR10482940,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 19-MBovis,M. bovis,SRR10482969,Cervid,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 22-12200,M. bovis,SRR10482942,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,New pattern 23-MBovis,M. bovis,SRR10482946,Cervid,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 26-12883,M. bovis,SRR10482965,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 28-12935,M. bovis,SRR10482938,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 3-10110,M. bovis,SRR10482966,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 31-12952,M. bovis,SRR10482937,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 48-2919,M. bovis,SRR10482972,Cervid,Ireland,2015,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 7-10423,M. bovis,SRR10482961,Cervid,Ireland,2014,32553050,Published,https://doi.org/10.1099/mgen.0.000388,SB0054 2006-0077,M. bovis,SRR6467891,Cervid,Canada,2006,29650575,Published,https://doi.org/10.1128/genomea.00258-18,SB0140 AgR103,M. bovis,ERR564361,Cervid,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR183,M. bovis,ERR564429,Cervid,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR186,M. bovis,ERR564432,Cervid,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR194,M. bovis,ERR564439,Cervid,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR204,M. bovis,ERR564446,Cervid,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR236,M. bovis,SRR5216765,Cervid,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR3,M. bovis,ERR564262,Cervid,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR32,M. bovis,ERR564291,Cervid,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR55,M. bovis,ERR564314,Cervid,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR59,M. bovis,ERR564318,Cervid,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR79,M. bovis,ERR564338,Cervid,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR9,M. bovis,ERR564268,Cervid,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR95,M. bovis,ERR564353,Cervid,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR10632,M. bovis,SRR7617362,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR11295,M. bovis,SRR7617861,Cervid,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR121422,M. bovis,SRR7617717,Cervid,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR150,M. bovis,SRR7617735,Cervid,New Zealand,1988,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1626,M. bovis,SRR7617596,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1629,M. bovis,SRR7617599,Cervid,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1631,M. bovis,SRR7617601,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1639,M. bovis,SRR7617741,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1641,M. bovis,SRR7617739,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1642,M. bovis,SRR7617738,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1643,M. bovis,SRR7617369,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1670,M. bovis,SRR7617664,Cervid,New Zealand,2008,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1676,M. bovis,SRR7617674,Cervid,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1678,M. bovis,SRR7617811,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1679,M. bovis,SRR7617810,Cervid,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1701282,M. bovis,SRR7617770,Cervid,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170174,M. bovis,SRR7617468,Cervid,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR170184,M. bovis,SRR7617466,Cervid,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170641,M. bovis,SRR7617542,Cervid,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR170692,M. bovis,SRR7617540,Cervid,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17109,M. bovis,SRR7617569,Cervid,New Zealand,2005,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17119,M. bovis,SRR7617722,Cervid,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17128,M. bovis,SRR7617419,Cervid,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17129,M. bovis,SRR7617808,Cervid,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17141,M. bovis,SRR7617551,Cervid,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17142,M. bovis,SRR7617554,Cervid,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17143,M. bovis,SRR7617553,Cervid,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17144,M. bovis,SRR7617556,Cervid,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1773,M. bovis,SRR7617794,Cervid,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1924 AgR1774,M. bovis,SRR7617795,Cervid,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1924 AgR1775,M. bovis,SRR7617792,Cervid,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1776,M. bovis,SRR7617793,Cervid,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1924 AgR1777,M. bovis,SRR7617790,Cervid,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1778,M. bovis,SRR7617791,Cervid,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1779,M. bovis,SRR7617788,Cervid,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1780,M. bovis,SRR7617789,Cervid,New Zealand,1995,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1781,M. bovis,SRR7617581,Cervid,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1782,M. bovis,SRR7617580,Cervid,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1783,M. bovis,SRR7617780,Cervid,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2640 AgR1784,M. bovis,SRR7617778,Cervid,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1789,M. bovis,SRR7617573,Cervid,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1790,M. bovis,SRR7617572,Cervid,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1793,M. bovis,SRR7617403,Cervid,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1794,M. bovis,SRR7617404,Cervid,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1796,M. bovis,SRR7617406,Cervid,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1797,M. bovis,SRR7617407,Cervid,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR227,M. bovis,SRR7617733,Cervid,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR267,M. bovis,SRR7617728,Cervid,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR411,M. bovis,SRR7617591,Cervid,New Zealand,1988,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR702,M. bovis,SRR7617513,Cervid,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR704,M. bovis,SRR7617511,Cervid,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR713,M. bovis,SRR7617765,Cervid,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR714,M. bovis,SRR7617762,Cervid,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR729,M. bovis,SRR7617615,Cervid,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR743,M. bovis,SRR7617529,Cervid,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR9410198,M. bovis,SRR7617484,Cervid,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 95-2601,M. bovis,SRR1792489,Cervid,USA,1995,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 94-1MIDNRdeerAlp,M. bovis,SRR3091255,Cervid,USA,1994,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 92-6302,M. bovis,SRR7240040,Cervid,USA,1992,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1531 91-2962,M. bovis,SRR7240439,Cervid,USA,1991,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB1531 02-3571,M. bovis,SRR7240346,Cervid,USA,2002,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 05-9393,M. bovis,SRR1791976,Cheese,USA,2005,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 06-45MIDNRelkMontm,M. bovis,SRR5817673,Elk,USA,2006,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-34MIDNRelkMontm,M. bovis,SRR5817712,Elk,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 03-33MIDNRelkPI,M. bovis,SRR5817711,Elk,USA,2003,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 01-61MIDNRelkMontm,M. bovis,SRR5817681,Elk,USA,2001,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 00-55MIDNRelkMontm,M. bovis,SRR5817690,Elk,USA,2000,30807679,Published,https://doi.org/10.1111/mec.15061,SB0145 AgR105,M. bovis,ERR564363,Ferret,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR106,M. bovis,ERR564364,Ferret,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR116,M. bovis,ERR564373,Ferret,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0980 AgR117,M. bovis,ERR564374,Ferret,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR125,M. bovis,SRR5216920,Ferret,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR126,M. bovis,SRR5216867,Ferret,New Zealand,1991,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR139,M. bovis,ERR564389,Ferret,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR140,M. bovis,ERR564390,Ferret,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR143,M. bovis,ERR564393,Ferret,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR149,M. bovis,ERR564397,Ferret,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR153,M. bovis,ERR564400,Ferret,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR154,M. bovis,ERR564401,Ferret,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR164,M. bovis,ERR564410,Ferret,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR169,M. bovis,ERR564415,Ferret,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR170,M. bovis,ERR564416,Ferret,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR172,M. bovis,ERR564418,Ferret,New Zealand,2008,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR173,M. bovis,ERR564419,Ferret,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR177,M. bovis,ERR564423,Ferret,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1031 AgR178,M. bovis,ERR564424,Ferret,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR179,M. bovis,ERR564425,Ferret,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR18,M. bovis,ERR564277,Ferret,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR187,M. bovis,ERR564433,Ferret,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR218,M. bovis,ERR564455,Ferret,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR221,M. bovis,ERR564458,Ferret,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR225,M. bovis,SRR5216806,Ferret,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR34,M. bovis,ERR564293,Ferret,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR35,M. bovis,ERR564294,Ferret,New Zealand,2003,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR47,M. bovis,ERR564306,Ferret,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR50,M. bovis,ERR564309,Ferret,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR51,M. bovis,ERR564310,Ferret,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR52,M. bovis,ERR564311,Ferret,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR56,M. bovis,ERR564315,Ferret,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR73,M. bovis,ERR564332,Ferret,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR74,M. bovis,ERR564333,Ferret,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR89,M. bovis,ERR564347,Ferret,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR91,M. bovis,ERR564349,Ferret,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR99,M. bovis,ERR564357,Ferret,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR106100,M. bovis,SRR7617713,Ferret,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1603,M. bovis,SRR7617826,Ferret,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1604,M. bovis,SRR7617823,Ferret,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1606613,M. bovis,SRR7617774,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1606616,M. bovis,SRR7617775,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1633,M. bovis,SRR7617747,Ferret,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1644,M. bovis,SRR7617370,Ferret,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1645,M. bovis,SRR7617367,Ferret,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1646,M. bovis,SRR7617368,Ferret,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1647,M. bovis,SRR7617373,Ferret,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1663,M. bovis,SRR7617519,Ferret,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1672,M. bovis,SRR7617666,Ferret,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1702421,M. bovis,SRR7617773,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17026616,M. bovis,SRR7617485,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17026628,M. bovis,SRR7617675,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1703,M. bovis,SRR7617701,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1704,M. bovis,SRR7617700,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1704651,M. bovis,SRR7617628,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17048911,M. bovis,SRR7617676,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17048914,M. bovis,SRR7617375,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17048918,M. bovis,SRR7617376,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17048919,M. bovis,SRR7617377,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17048922,M. bovis,SRR7617378,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1704894,M. bovis,SRR7617631,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1705,M. bovis,SRR7617699,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17053122,M. bovis,SRR7617379,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17053156,M. bovis,SRR7617380,Ferret,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1707,M. bovis,SRR7617707,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1708,M. bovis,SRR7617706,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1709,M. bovis,SRR7617438,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1710,M. bovis,SRR7617558,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1711,M. bovis,SRR7617559,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1712,M. bovis,SRR7617560,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1713,M. bovis,SRR7617561,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17131,M. bovis,SRR7617538,Ferret,New Zealand,1989,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17139,M. bovis,SRR7617549,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17140,M. bovis,SRR7617552,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR17145,M. bovis,SRR7617555,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17146,M. bovis,SRR7617411,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17147,M. bovis,SRR7617557,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17151,M. bovis,SRR7617639,Ferret,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17152,M. bovis,SRR7617640,Ferret,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17153,M. bovis,SRR7617641,Ferret,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17158,M. bovis,SRR7617450,Ferret,New Zealand,1995,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0998 AgR1718,M. bovis,SRR7617633,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1719,M. bovis,SRR7617473,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1720,M. bovis,SRR7617472,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1721,M. bovis,SRR7617475,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1722,M. bovis,SRR7617474,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1726,M. bovis,SRR7617478,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1728,M. bovis,SRR7617480,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1731,M. bovis,SRR7617841,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1736,M. bovis,SRR7617846,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1739,M. bovis,SRR7617647,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1740,M. bovis,SRR7617646,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1742,M. bovis,SRR7617644,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1748,M. bovis,SRR7617652,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0484 AgR1750,M. bovis,SRR7617503,Ferret,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1758,M. bovis,SRR7617507,Ferret,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1786,M. bovis,SRR7617576,Ferret,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1787,M. bovis,SRR7617575,Ferret,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1788,M. bovis,SRR7617574,Ferret,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR415,M. bovis,SRR7617443,Ferret,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR503,M. bovis,SRR7617431,Ferret,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR517,M. bovis,SRR7617799,Ferret,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR526,M. bovis,SRR7617802,Ferret,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR556,M. bovis,SRR7617656,Ferret,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR703,M. bovis,SRR7617512,Ferret,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR707,M. bovis,SRR7617516,Ferret,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR709,M. bovis,SRR7617514,Ferret,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR717,M. bovis,SRR7617761,Ferret,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR718,M. bovis,SRR7617758,Ferret,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR726,M. bovis,SRR7617618,Ferret,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR746,M. bovis,SRR7617681,Ferret,New Zealand,1996,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR600,M. caprae,SRR7617662,Goat,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1622 AgR17157,M. bovis,SRR7617635,Hedgehog,New Zealand,1995,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0998 13-1212317FM,M. bovis,SRR7236317,Human,Mexico,2013,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0673 14-805568FM,M. bovis,SRR7236363,Human,Mexico,2014,30138365,Published,https://doi.org/10.1371/journal.pone.0201981,SB0971 mbov-25,M. bovis,ERR2815590,Human,Germany,2012,32817084,Published,https://doi.org/10.1128/jcm.01573-20,SB0141 mbov-131,M. bovis,ERR552515,Human,Germany,2000,32817084,Published,https://doi.org/10.1128/jcm.01573-20,SB0267 AgR106108,M. bovis,SRR7617710,Human,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0673 10-C084,M. bovis,SRR5657408,Human,Mexico,2011,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 11-C273,M. bovis,SRR5657409,Human,Mexico,2011,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 11-C328,M. bovis,SRR5657410,Human,Mexico,2011,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 11-C329,M. bovis,SRR5657400,Human,Mexico,2011,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 11-C333,M. bovis,SRR5657401,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C335,M. bovis,SRR5657478,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 12-C337,M. bovis,SRR5657477,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 12-C338,M. bovis,SRR5657480,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C339,M. bovis,SRR5657479,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C340,M. bovis,SRR5657482,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C341,M. bovis,SRR5657481,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C342,M. bovis,SRR5657484,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C343,M. bovis,SRR5657483,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0971 12-C345,M. bovis,SRR5657486,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 12-C347,M. bovis,SRR5657485,Human,Mexico,2012,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 12-C348,M. bovis,SRR5657464,Human,Mexico,2013,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB0145 14-HGTJ358,M. bovis,SRR5657465,Human,Mexico,2013,28739421,Published,https://doi.org/10.1016/j.ijid.2017.07.012,SB1040 9564-00,M. bovis,ERR552516,Human,Congo,2011,28221129,Published,https://doi.org/10.3201/eid2303.160679,SB0267 PP3800_8_CA0380008,M. bovis,ERR751369,Human,Peru,2008,29281674,Published,https://doi.org/10.1371/journal.pone.0189838,New pattern W29231,M. bovis,SRR1735617,Human,UK,2013,25631807,Published,https://doi.org/10.1128/jcm.03073-14,SB0263 01-1787,M. bovis,SRR1791707,Jaguar,USA,2001,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0140 Bovis1199 B(19),M. bovis,ERR1815550,Lion,South Africa,1998,28412523,Published,https://doi.org/10.1016/j.meegid.2017.04.012,SB0130 13-3970,M. bovis,SRR1792428,Opossum,USA,2013,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 AgR110,M. bovis,ERR564368,Pig,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0484 AgR123,M. bovis,ERR564378,Pig,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR127,M. bovis,ERR564380,Pig,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB2641 AgR129,M. bovis,ERR564381,Pig,New Zealand,1982,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR134,M. bovis,ERR564385,Pig,New Zealand,1987,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR151,M. bovis,ERR564398,Pig,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR19,M. bovis,ERR564278,Pig,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR207,M. bovis,ERR564448,Pig,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR215,M. bovis,ERR564453,Pig,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR277,M. bovis,ERR564468,Pig,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR282,M. bovis,SRR5216749,Pig,New Zealand,2004,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR070487,M. bovis,SRR7617783,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR10653,M. bovis,SRR7617363,Pig,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR10680,M. bovis,SRR7617361,Pig,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1504 AgR1268,M. bovis,SRR7617677,Pig,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1270,M. bovis,SRR7617827,Pig,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR160712,M. bovis,SRR7617754,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR16102,M. bovis,SRR7617494,Pig,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR16103,M. bovis,SRR7617497,Pig,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1612,M. bovis,SRR7617458,Pig,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1613,M. bovis,SRR7617457,Pig,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1614,M. bovis,SRR7617452,Pig,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1651,M. bovis,SRR7617365,Pig,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1654,M. bovis,SRR7617521,Pig,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2627 AgR1674,M. bovis,SRR7617673,Pig,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1702,M. bovis,SRR7617702,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1702291,M. bovis,SRR7617771,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR1702292,M. bovis,SRR7617772,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1031 AgR1703411,M. bovis,SRR7617625,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1704292,M. bovis,SRR7617627,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1704521,M. bovis,SRR7617626,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1704532,M. bovis,SRR7617629,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1705403,M. bovis,SRR7617630,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1705404,M. bovis,SRR7617623,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1705405,M. bovis,SRR7617622,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1705461,M. bovis,SRR7617482,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB1787 AgR1707022,M. bovis,SRR7617483,Pig,New Zealand,2017,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17102,M. bovis,SRR7617570,Pig,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17104,M. bovis,SRR7617768,Pig,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17105,M. bovis,SRR7617769,Pig,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17106,M. bovis,SRR7617566,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17107,M. bovis,SRR7617567,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17110,M. bovis,SRR7617578,Pig,New Zealand,2005,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17111,M. bovis,SRR7617579,Pig,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2643 AgR17112,M. bovis,SRR7617721,Pig,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2643 AgR17113,M. bovis,SRR7617720,Pig,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2643 AgR17114,M. bovis,SRR7617719,Pig,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17118,M. bovis,SRR7617723,Pig,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2643 AgR17120,M. bovis,SRR7617727,Pig,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17121,M. bovis,SRR7617726,Pig,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17122,M. bovis,SRR7617414,Pig,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17123,M. bovis,SRR7617415,Pig,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17127,M. bovis,SRR7617418,Pig,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17149,M. bovis,SRR7617637,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17155,M. bovis,SRR7617643,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17156,M. bovis,SRR7617634,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1727,M. bovis,SRR7617481,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1729,M. bovis,SRR7617843,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1735,M. bovis,SRR7617845,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1741,M. bovis,SRR7617645,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1749,M. bovis,SRR7617502,Pig,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1798,M. bovis,SRR7617408,Pig,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1800156,M. bovis,SRR7617781,Pig,New Zealand,2018,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR191,M. bovis,SRR7617731,Pig,New Zealand,1988,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR260,M. bovis,SRR7617729,Pig,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR401,M. bovis,SRR7617586,Pig,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR403,M. bovis,SRR7617588,Pig,New Zealand,2007,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR4202630,M. bovis,SRR7617486,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR4202636,M. bovis,SRR7617487,Pig,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR502,M. bovis,SRR7617430,Pig,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR504,M. bovis,SRR7617428,Pig,New Zealand,2005,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR727,M. bovis,SRR7617613,Pig,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR730,M. bovis,SRR7617614,Pig,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 08-7446,M. bovis,SRR1792159,Pig,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 08-5717,M. bovis,SRR1792152,Pig,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 08-5155,M. bovis,SRR1792146,Pig,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 08-1960,M. bovis,SRR1792107,Pig,USA,2008,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 06-4387,M. bovis,SRR1792014,Pig,USA,2006,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 03-5734,M. bovis,SRR1791889,Pig,USA,2003,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0145 AgR1,M. bovis,ERR564260,Possum,New Zealand,1988,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR100,M. bovis,ERR564358,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR104,M. bovis,ERR564362,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR107,M. bovis,ERR564365,Possum,New Zealand,1988,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR111,M. bovis,SRR5216746,Possum,New Zealand,1987,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR112,M. bovis,ERR564369,Possum,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR115,M. bovis,ERR564372,Possum,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR119,M. bovis,ERR564376,Possum,New Zealand,1983,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR12,M. bovis,ERR564271,Possum,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR124,M. bovis,ERR564379,Possum,New Zealand,1993,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR131,M. bovis,ERR564383,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR132,M. bovis,SRR5216960,Possum,New Zealand,1982,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR141,M. bovis,ERR564391,Possum,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR145,M. bovis,SRR5216888,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR146,M. bovis,SRR5216964,Possum,New Zealand,1984,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR155,M. bovis,SRR5216973,Possum,New Zealand,1983,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR162,M. bovis,ERR564408,Possum,New Zealand,1989,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR192,M. bovis,ERR564437,Possum,New Zealand,2001,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR195,M. bovis,ERR564440,Possum,New Zealand,1994,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR197,M. bovis,SRR5216984,Possum,New Zealand,1983,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR200,M. bovis,SRR5216696,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR201,M. bovis,ERR564444,Possum,New Zealand,1996,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR232,M. bovis,SRR5216898,Possum,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR239,M. bovis,SRR5216757,Possum,New Zealand,2002,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR241,M. bovis,ERR564464,Possum,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB1504 AgR249,M. bovis,SRR5216843,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR252,M. bovis,SRR5216917,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR259,M. bovis,SRR5216877,Possum,New Zealand,2009,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR26,M. bovis,ERR564285,Possum,New Zealand,1983,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR264,M. bovis,SRR5216729,Possum,New Zealand,1989,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR266,M. bovis,SRR5216919,Possum,New Zealand,2007,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR280,M. bovis,SRR5216912,Possum,New Zealand,2011,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR281,M. bovis,SRR5216803,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR283,M. bovis,SRR5216873,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR290,M. bovis,SRR5216972,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR291,M. bovis,SRR5216858,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR292,M. bovis,SRR5216974,Possum,New Zealand,1984,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR294,M. bovis,SRR5216730,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR296,M. bovis,SRR5216922,Possum,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR300,M. bovis,SRR5216945,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR304,M. bovis,SRR5216951,Possum,New Zealand,1984,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR306,M. bovis,SRR5216753,Possum,New Zealand,2006,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR317,M. bovis,SRR5216879,Possum,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR42,M. bovis,ERR564301,Possum,New Zealand,1988,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR48,M. bovis,ERR564307,Possum,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR49,M. bovis,ERR564308,Possum,New Zealand,1992,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR6,M. bovis,ERR564265,Possum,New Zealand,2000,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR66,M. bovis,ERR564325,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR68,M. bovis,ERR564327,Possum,New Zealand,1998,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR72,M. bovis,ERR564331,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR83,M. bovis,ERR564342,Possum,New Zealand,1985,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR94,M. bovis,ERR564352,Possum,New Zealand,1997,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR96,M. bovis,ERR564354,Possum,New Zealand,1999,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 N28,M. bovis,SRR5216810,Possum,New Zealand,2012,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 N31,M. bovis,SRR5216895,Possum,New Zealand,2012,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0130 AgR091153,M. bovis,SRR7617782,Possum,New Zealand,2009,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR10691,M. bovis,SRR7617670,Possum,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR10695,M. bovis,SRR7617357,Possum,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR160610,M. bovis,SRR7617752,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR160611,M. bovis,SRR7617755,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR160844,M. bovis,SRR7617605,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1627,M. bovis,SRR7617597,Possum,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1648,M. bovis,SRR7617374,Possum,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1649,M. bovis,SRR7617371,Possum,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1650,M. bovis,SRR7617372,Possum,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1656,M. bovis,SRR7617520,Possum,New Zealand,1984,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1657,M. bovis,SRR7617523,Possum,New Zealand,2015,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1658,M. bovis,SRR7617522,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1659,M. bovis,SRR7617525,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1662,M. bovis,SRR7617526,Possum,New Zealand,1994,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1673,M. bovis,SRR7617667,Possum,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1692,M. bovis,SRR7617818,Possum,New Zealand,2013,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1693,M. bovis,SRR7617817,Possum,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1696,M. bovis,SRR7617705,Possum,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1697,M. bovis,SRR7617704,Possum,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17100,M. bovis,SRR7617489,Possum,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17101,M. bovis,SRR7617488,Possum,New Zealand,2002,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17103,M. bovis,SRR7617571,Possum,New Zealand,2003,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17108,M. bovis,SRR7617568,Possum,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17115,M. bovis,SRR7617718,Possum,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17116,M. bovis,SRR7617725,Possum,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17117,M. bovis,SRR7617724,Possum,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR17124,M. bovis,SRR7617412,Possum,New Zealand,1992,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17126,M. bovis,SRR7617413,Possum,New Zealand,1999,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17133,M. bovis,SRR7617423,Possum,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17134,M. bovis,SRR7617550,Possum,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1714,M. bovis,SRR7617562,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17148,M. bovis,SRR7617636,Possum,New Zealand,1993,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1715,M. bovis,SRR7617563,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR17154,M. bovis,SRR7617642,Possum,New Zealand,1982,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1716,M. bovis,SRR7617564,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2639 AgR1756,M. bovis,SRR7617501,Possum,New Zealand,2016,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1785,M. bovis,SRR7617577,Possum,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR1791,M. bovis,SRR7617401,Possum,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1792,M. bovis,SRR7617402,Possum,New Zealand,2000,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1795,M. bovis,SRR7617405,Possum,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR1799,M. bovis,SRR7617409,Possum,New Zealand,2001,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR402,M. bovis,SRR7617587,Possum,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR413,M. bovis,SRR7617445,Possum,New Zealand,2011,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR419,M. bovis,SRR7617440,Possum,New Zealand,1985,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR705,M. bovis,SRR7617510,Possum,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR706,M. bovis,SRR7617517,Possum,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR710,M. bovis,SRR7617509,Possum,New Zealand,1998,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0140 AgR721,M. bovis,SRR7617767,Possum,New Zealand,2010,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR740,M. bovis,SRR7617532,Possum,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR741,M. bovis,SRR7617533,Possum,New Zealand,1990,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR742,M. bovis,SRR7617528,Possum,New Zealand,2014,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB2565 AgR928,M. bovis,SRR7617680,Possum,New Zealand,2012,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR931,M. bovis,SRR7617687,Possum,New Zealand,1985,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR932,M. bovis,SRR7617686,Possum,New Zealand,1997,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR935,M. bovis,SRR7617685,Possum,New Zealand,2004,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 AgR939,M. bovis,SRR7617684,Possum,New Zealand,2008,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 mbov-24,M. bovis,ERR2815609,Raccoon,Germany,2012,32817084,Published,https://doi.org/10.1128/jcm.01573-20,SB0141 AgR190,M. bovis,ERR564436,Stoat,New Zealand,2005,28209138,Published,https://doi.org/10.1186/s12864-017-3569-x,SB0140 AgR17132,M. bovis,SRR7617422,Stoat,New Zealand,2006,30425997,Published,https://doi.org/10.3389/fvets.2018.00272,SB0130 97-2091,M. bovis,SRR7240451,Unknown,USA,1997,30425994,Published,https://doi.org/10.3389/fvets.2018.00253,SB0673 Case_11,M. bovis,ERR4352203,Wild dog,South Africa,2017,,Published,https://doi.org/10.1111/tbed.13947,New pattern Case_12_1,M. bovis,ERR4352204,Wild dog,South Africa,2017,,Published,https://doi.org/10.1111/tbed.13947,SB0130 Case_12_2,M. bovis,ERR4352205,Wild dog,South Africa,2017,,Published,https://doi.org/10.1111/tbed.13947,SB0130 BMR25-85,M. bovis,SRR6467887,Wood bison,Canada,1985,29650575,Published,https://doi.org/10.1128/genomea.00258-18,SB0130