patient	stage	tumor_sample_barcode	Gene	MMB
pt1	T1	pt1_T1_B	APC	21.1
pt1	T1	pt1_T1_B	BRAF	31.66
pt1	T1	pt1_T1_B	ERG	20.88
pt1	T1	pt1_T1_B	GRIN2A	16.99
pt1	T1	pt1_T1_B	KMT2D	19.62
pt1	T1	pt1_T1_B	"MEF2B,MEF2BNB-MEF2B"	3
pt1	T1	pt1_T1_B	TP53	21.61
pt10	T1	pt10_T1_B	BRCA1	1.47
pt10	T1	pt10_T1_B	KRAS	0.99
pt11	T1	pt11_T1_B	APC	6.665
pt11	T1	pt11_T1_B	SMARCA4	1.77
pt11	T1	pt11_T1_B	TP53	12.04
pt12	T1	pt12_T1_B	ARID1A	32.28
pt12	T1	pt12_T1_B	KDM5C	52.9
pt12	T1	pt12_T1_B	KMT2D	20.13
pt12	T1	pt12_T1_B	KRAS	54.09
pt12	T1	pt12_T1_B	RNF43	40.94
pt12	T1	pt12_T1_B	SMAD4	37.31
pt12	T1	pt12_T1_B	SMARCA4	19.34
pt12	T1	pt12_T1_B	SPEN	15
pt12	T1	pt12_T1_B	TP53	38.21
pt12	T2	pt12_T2_B	ARID1A	3.22
pt12	T2	pt12_T2_B	KDM5C	4.68
pt12	T2	pt12_T2_B	KMT2D	2.4
pt12	T2	pt12_T2_B	KRAS	5.31
pt12	T2	pt12_T2_B	RNF43	3.16
pt12	T2	pt12_T2_B	SMAD4	2.26
pt12	T2	pt12_T2_B	SMARCA4	1.74
pt12	T2	pt12_T2_B	SPEN	1.4
pt12	T2	pt12_T2_B	TP53	1.58
pt13	T1	pt13_T1_B	RET	1.12
pt13	T2	pt13_T2_B	IDH1	0.32
pt13	T2	pt13_T2_B	KMT2C	1
pt13	T2	pt13_T2_B	MSH2	0.33
pt13	T2	pt13_T2_B	PMS2	0.41
pt13	T2	pt13_T2_B	RET	1.27
pt14	T2	pt14_T2_B	PMS2	0.38
pt15	T1	pt15_T1_B	BRCA1	49.26
pt15	T1	pt15_T1_B	KRAS	0.42
pt15	T1	pt15_T1_B	SMAD4	0.45
pt15	T2	pt15_T2_B	BRCA1	49.74
pt15	T2	pt15_T2_B	RB1	0.32
pt16	T1	pt16_T1_B	APC	5.065
pt16	T1	pt16_T1_B	MYC	6.55
pt16	T1	pt16_T1_B	NRAS	6.91
pt16	T1	pt16_T1_B	SMAD4	4.85
pt16	T1	pt16_T1_B	TP53	7.84
pt16	T2	pt16_T2_B	APC	18.465
pt16	T2	pt16_T2_B	DNMT3A	1.68
pt16	T2	pt16_T2_B	MYC	13.77
pt16	T2	pt16_T2_B	NRAS	15.13
pt16	T2	pt16_T2_B	SMAD4	20.44
pt16	T2	pt16_T2_B	TP53	19.33
pt17	T1	pt17_T1_B	APC	8.55
pt17	T1	pt17_T1_B	ATM	12.83
pt17	T1	pt17_T1_B	KRAS	8.24
pt17	T1	pt17_T1_B	SDHA	1.19
pt17	T1	pt17_T1_B	SMAD4	0.3
pt17	T1	pt17_T1_B	TP53	6.89
pt17	T1	pt17_T1_B	WT1	1.3
pt17	T2	pt17_T2_B	APC	2.32
pt17	T2	pt17_T2_B	ATM	2.59
pt17	T2	pt17_T2_B	KRAS	1.47
pt17	T2	pt17_T2_B	PALB2	1.02
pt17	T2	pt17_T2_B	RB1	0.35
pt17	T2	pt17_T2_B	TP53	2.75
pt18	T1	pt18_T1_B	IDH2	1.12
pt18	T1	pt18_T1_B	MSH2	0.375
pt19	T1	pt19_T1_B	ARID1A	1.48
pt19	T1	pt19_T1_B	MED12	1.01
pt19	T1	pt19_T1_B	NOTCH1	1.4
pt2	T1	pt2_T1_B	ATM	12.24
pt2	T1	pt2_T1_B	B2M	9.02
pt2	T1	pt2_T1_B	BRAF	4.91
pt2	T1	pt2_T1_B	FLT1	6.51
pt2	T1	pt2_T1_B	PIK3CA	5.02
pt2	T1	pt2_T1_B	WT1	5.05
pt2	T2	pt2_T2_B	ATM	10.8
pt2	T2	pt2_T2_B	B2M	5.38
pt2	T2	pt2_T2_B	BRAF	4.25
pt2	T2	pt2_T2_B	FLT1	4.47
pt2	T2	pt2_T2_B	HIST1H3B	3.68
pt2	T2	pt2_T2_B	MLH1	0.32
pt2	T2	pt2_T2_B	PIK3CA	5.15
pt2	T2	pt2_T2_B	WT1	3.85
pt21	T1	pt21_T1_B	APC	41.845
pt21	T1	pt21_T1_B	ARID2	36.57
pt21	T1	pt21_T1_B	BRD4	6.43
pt21	T1	pt21_T1_B	CDKN2B	1.69
pt21	T1	pt21_T1_B	ERBB3	41.28
pt21	T1	pt21_T1_B	FAT1	42.27
pt21	T1	pt21_T1_B	FBXW7	37.21
pt21	T1	pt21_T1_B	IKBKE	7.23
pt21	T1	pt21_T1_B	IRS2	30.94
pt21	T1	pt21_T1_B	KDM5C	6.73
pt21	T1	pt21_T1_B	KMT2C	15.455
pt21	T1	pt21_T1_B	KMT2D	2.11667
pt21	T1	pt21_T1_B	KRAS	39.67
pt21	T1	pt21_T1_B	MSH2	83.69
pt21	T1	pt21_T1_B	NF1	36.59
pt21	T1	pt21_T1_B	NOTCH3	2.15
pt21	T1	pt21_T1_B	PIK3CG	30.36
pt21	T1	pt21_T1_B	PRDM1	7.22
pt21	T1	pt21_T1_B	PRKCI	8.95
pt21	T1	pt21_T1_B	RARA	2.04
pt21	T1	pt21_T1_B	ROS1	41.42
pt21	T1	pt21_T1_B	RPTOR	3.31
pt21	T1	pt21_T1_B	SMAD2	41.15
pt21	T1	pt21_T1_B	SMO	27.12
pt21	T1	pt21_T1_B	TBX3	7.2
pt21	T1	pt21_T1_B	TERT	11.44
pt21	T1	pt21_T1_B	TSC2	82.21
pt21	T2	pt21_T2_B	APC	7.775
pt21	T2	pt21_T2_B	ARID2	6.76
pt21	T2	pt21_T2_B	BRD4	1.75
pt21	T2	pt21_T2_B	CDKN2B	2.28
pt21	T2	pt21_T2_B	ERBB3	6.13
pt21	T2	pt21_T2_B	FAT1	6.9
pt21	T2	pt21_T2_B	FBXW7	6.36
pt21	T2	pt21_T2_B	KDM5C	4.67
pt21	T2	pt21_T2_B	KMT2C	7.46
pt21	T2	pt21_T2_B	KMT2D	2.51
pt21	T2	pt21_T2_B	KRAS	6.1
pt21	T2	pt21_T2_B	MSH2	13.62
pt21	T2	pt21_T2_B	NF1	6.09
pt21	T2	pt21_T2_B	PIK3CG	7.37
pt21	T2	pt21_T2_B	PRKCI	2.91
pt21	T2	pt21_T2_B	RARA	1.31
pt21	T2	pt21_T2_B	ROS1	6.46
pt21	T2	pt21_T2_B	RPTOR	2.09
pt21	T2	pt21_T2_B	SMAD2	6.6
pt21	T2	pt21_T2_B	SMO	7.32
pt21	T2	pt21_T2_B	TBX3	1.06
pt21	T2	pt21_T2_B	TERT	2.78
pt21	T2	pt21_T2_B	TSC2	13.23
pt22	T1	pt22_T1_B	KRAS	0.3
pt22	T2	pt22_T2_B	CHEK2	1.43
pt23	T1	pt23_T1_B	APC	1.08
pt23	T1	pt23_T1_B	KRAS	2.41
pt23	T1	pt23_T1_B	MSH2	0.35
pt23	T2	pt23_T2_B	CHEK2	1.52
pt23	T2	pt23_T2_B	MLH1	0.39
pt23	T2	pt23_T2_B	PDGFRB	1.12
pt24	T1	pt24_T1_B	BRAF	0.45
pt24	T1	pt24_T1_B	KRAS	1.54
pt24	T2	pt24_T2_B	BRAF	1.49
pt24	T2	pt24_T2_B	KRAS	3.87
pt25	T1	pt25_T1_B	APC	56.27
pt25	T1	pt25_T1_B	KRAS	34.04
pt25	T1	pt25_T1_B	TP53	35.82
pt25	T2	pt25_T2_B	MLH1	0.34
pt26	T2	pt26_T2_B	APC	1.69
pt26	T2	pt26_T2_B	MSH2	0.38
pt26	T2	pt26_T2_B	PIK3CB	2.23
pt26	T2	pt26_T2_B	RB1	0.36
pt26	T2	pt26_T2_B	TP53	1.36
pt27	T1	pt27_T1_B	AMER1	1.75
pt27	T1	pt27_T1_B	APC	1.4
pt27	T1	pt27_T1_B	ERBB2	1.36
pt27	T1	pt27_T1_B	KRAS	4.08
pt27	T2	pt27_T2_B	AMER1	2.04
pt27	T2	pt27_T2_B	APC	1.43
pt27	T2	pt27_T2_B	ERBB2	3.45
pt27	T2	pt27_T2_B	KRAS	4.37
pt27	T2	pt27_T2_B	SMAD3	2.27
pt27	T2	pt27_T2_B	SMARCA4	1.15
pt29	T1	pt29_T1_B	KMT2C	1.91
pt29	T1	pt29_T1_B	LATS1	1.73
pt29	T1	pt29_T1_B	NUP93	1.18
pt29	T1	pt29_T1_B	TP53	3.22
pt29	T2	pt29_T2_B	APC	12.47
pt29	T2	pt29_T2_B	KMT2C	13.15
pt29	T2	pt29_T2_B	LATS1	13.34
pt29	T2	pt29_T2_B	SMARCA4	8.7
pt29	T2	pt29_T2_B	TP53	22.94
pt3	T1	pt3_T1_B	FBXW7	0.49
pt3	T1	pt3_T1_B	KRAS	0.6
pt30	T1	pt30_T1_B	APC	82.18
pt30	T1	pt30_T1_B	EPHB1	41.24
pt30	T1	pt30_T1_B	KRAS	57.41
pt30	T1	pt30_T1_B	PPP2R1A	55.24
pt30	T1	pt30_T1_B	SMAD2	37.63
pt30	T1	pt30_T1_B	SOX9	71.76
pt30	T2	pt30_T2_B	APC	54.7
pt30	T2	pt30_T2_B	EPHB1	28.28
pt30	T2	pt30_T2_B	KRAS	43.16
pt30	T2	pt30_T2_B	PPP2R1A	35.35
pt30	T2	pt30_T2_B	PTPRT	2.96
pt30	T2	pt30_T2_B	SMAD2	25.235
pt30	T2	pt30_T2_B	SOX9	52.94
pt31	T1	pt31_T1_B	APC	1.62
pt31	T1	pt31_T1_B	GRIN2A	1.73
pt31	T1	pt31_T1_B	KRAS	1.32
pt31	T1	pt31_T1_B	SMAD4	1.72
pt31	T2	pt31_T2_B	EP300	1.23
pt32	T1	pt32_T1_B	APC	2.14
pt32	T1	pt32_T1_B	KRAS	1.685
pt32	T1	pt32_T1_B	MLH1	0.47
pt32	T1	pt32_T1_B	MSH6	0.32
pt32	T1	pt32_T1_B	PMS2	1.19
pt32	T1	pt32_T1_B	SMAD4	0.35
pt32	T1	pt32_T1_B	U2AF1	1.03
pt33	T1	pt33_T1_B	APC	18.035
pt33	T1	pt33_T1_B	ATM	13.96
pt33	T1	pt33_T1_B	GRIN2A	13
pt33	T1	pt33_T1_B	KRAS	19.99
pt33	T1	pt33_T1_B	PIK3CA	0.59
pt33	T1	pt33_T1_B	PTPRT	36.05
pt34	T1	pt34_T1_B	APC	4.23
pt34	T1	pt34_T1_B	GATA3	3.45
pt34	T1	pt34_T1_B	GNAS	17.23
pt34	T1	pt34_T1_B	HNF1A	2.41
pt36	T1	pt36_T1_B	AKT1	15.82
pt36	T1	pt36_T1_B	APC	10.58
pt36	T1	pt36_T1_B	ATP8A1	10.23
pt36	T1	pt36_T1_B	KMT2D	7.58
pt36	T1	pt36_T1_B	KRAS	12.11
pt36	T1	pt36_T1_B	SMAD2	17.17
pt36	T1	pt36_T1_B	SMAD3	15.83
pt36	T1	pt36_T1_B	TET1	10.76
pt36	T1	pt36_T1_B	TP53	14.19
pt36	T2	pt36_T2_B	AKT1	20.74
pt36	T2	pt36_T2_B	APC	14.29
pt36	T2	pt36_T2_B	ATP8A1	12.81
pt36	T2	pt36_T2_B	KMT2D	9.09
pt36	T2	pt36_T2_B	KRAS	17.86
pt36	T2	pt36_T2_B	SMAD2	22.84
pt36	T2	pt36_T2_B	SMAD3	22.4
pt36	T2	pt36_T2_B	TET1	13.05
pt36	T2	pt36_T2_B	TP53	19.25
pt37	T1	pt37_T1_B	APC	1.32
pt37	T1	pt37_T1_B	KRAS	1.01
pt37	T1	pt37_T1_B	PIK3CA	0.76
pt37	T1	pt37_T1_B	SMAD4	0.73
pt37	T1	pt37_T1_B	TP53	0.59
pt38	T1	pt38_T1_B	APC	20.08
pt38	T1	pt38_T1_B	HMCN1	11.94
pt38	T1	pt38_T1_B	TP53	19.86
pt38	T2	pt38_T2_B	MSH2	0.36
pt39	T1	pt39_T1_B	APC	25.76
pt39	T1	pt39_T1_B	FLT1	22.47
pt39	T1	pt39_T1_B	FOXA1	11.31
pt39	T1	pt39_T1_B	FOXP1	10.86
pt39	T1	pt39_T1_B	IMPG1	24.93
pt39	T1	pt39_T1_B	KDR	11.59
pt39	T1	pt39_T1_B	PTPN11	22.86
pt39	T1	pt39_T1_B	RICTOR	12.55
pt39	T1	pt39_T1_B	TP53	33.95
pt40	T1	pt40_T1_B	APC	23.9833
pt40	T1	pt40_T1_B	KRAS	34.2
pt40	T1	pt40_T1_B	SMAD4	59.83
pt40	T1	pt40_T1_B	TP53	58.67
pt40	T1	pt40_T1_B	TRIM24	1.63
pt40	T2	pt40_T2_B	APC	23.3967
pt40	T2	pt40_T2_B	KRAS	16.08
pt40	T2	pt40_T2_B	SMAD4	55.45
pt40	T2	pt40_T2_B	TP53	59.21
pt40	T2	pt40_T2_B	TRIM24	1.03
pt41	T1	pt41_T1_B	AMER1	81.86
pt41	T1	pt41_T1_B	APC	33.8
pt41	T1	pt41_T1_B	KRAS	59.54
pt41	T1	pt41_T1_B	TP53	59.95
pt41	T2	pt41_T2_B	AMER1	47.56
pt41	T2	pt41_T2_B	APC	17.81
pt41	T2	pt41_T2_B	KRAS	34.92
pt41	T2	pt41_T2_B	TP53	25.54
pt6	T1	pt6_T1_B	APC	29.39
pt6	T1	pt6_T1_B	KRAS	44.78
pt6	T1	pt6_T1_B	MSH2	0.31
pt6	T1	pt6_T1_B	PRKAR1A	15.55
pt6	T1	pt6_T1_B	TP53	62.7
pt6	T2	pt6_T2_B	APC	8.29
pt6	T2	pt6_T2_B	KRAS	15.37
pt6	T2	pt6_T2_B	PRKAR1A	4.66
pt6	T2	pt6_T2_B	TP53	20.78
pt7	T1	pt7_T1_B	EPHA7	1.35
pt7	T1	pt7_T1_B	H3F3A	1.02
pt7	T1	pt7_T1_B	KRAS	3.74
pt7	T1	pt7_T1_B	SMAD4	1.56
pt7	T1	pt7_T1_B	TP53	1.48
pt7	T2	pt7_T2_B	KRAS	2.38
pt7	T2	pt7_T2_B	MLH1	0.36
pt7	T2	pt7_T2_B	MSH2	0.3
pt7	T2	pt7_T2_B	SMAD4	1.07
pt7	T2	pt7_T2_B	TP53	1.03
pt8	T2	pt8_T2_B	EZH2	1.1
pt9	T1	pt9_T1_B	EGFR	0.31
pt9	T1	pt9_T1_B	TP53	60.63
pt9	T2	pt9_T2_B	TP53	21.04