Gene_ID,baseMean,F16-ILEUM_S8-Uninfected-STAg,F17-ILEUM_S10-Uninfected-STAg,F18-ILEUM_S12-Uninfected-STAg,F19-ILEUM_S14-Infected-STAg,F20-ILEUM_S16-Infected-STAg,F21-ILEUM_S18-Infected-STAg,log2FoldChange,lfcSE,stat,pvalue,padj
3930402G23Rik,50.71220528,24,12,18,104,82,93,2.417802464,0.384171162,6.293555332,3.10E-10,1.17E-07
Acaa1b,82.38283016,140.02,140.58,103.08,29.36,15,12.08,-2.661871151,0.439512071,-6.056423304,1.39E-09,4.43E-07
Acsm5,19.56427042,17,38,23,7,3,5,-2.338364467,0.797955728,-2.930443865,0.003384781,0.036336564
Ak4,947.5981965,600,267,172,1795,1358,950,2.049427901,0.656188746,3.123229274,0.001788783,0.023708756
Alas2,45.87403273,9,20,7,30,86.96,49,2.273679081,0.580078002,3.919609215,8.87E-05,0.002846579
Apol9a,3109.072264,600.69,615.81,1393.14,8340.87,5719.74,4186.04,2.790083033,0.55039566,5.069231529,3.99E-07,4.41E-05
Apol9b,1154.346261,125.31,214.19,481.86,3594.13,1905.26,1476.96,3.011395497,0.697095332,4.319919185,1.56E-05,0.000828758
AW011738,135.472936,35,58,53,389,245,242,2.605252438,0.301372637,8.644621695,5.40E-18,1.59E-14
Bst2,1206.481134,329,236,288,3313,2463,2080,3.244233787,0.632203379,5.13162994,2.87E-07,3.58E-05
Ccrl2,93.50567385,43,40,51,248,175,118,2.023521283,0.302371431,6.692170871,2.20E-11,1.21E-08
Cd274,706.3094725,175,182,310,1909,1603,735,2.67660171,0.339964983,7.873168843,3.46E-15,5.09E-12
Cmpk2,3651.343679,1448,1850,2076,9645,7223,4765,2.018883305,0.299082343,6.750259092,1.48E-11,8.70E-09
Cxcl1,13.16385891,4,1,6,12,28,18,2.468332362,0.733494796,3.365166837,0.000764974,0.013234348
Cyp11b1,25.41388729,9.01,6,11,38,50,49.94,2.478114892,0.550982569,4.497628474,6.87E-06,0.000427803
Cyp1a1,13.76288697,3,20,29,6,1,1,-2.742737513,0.920785017,-2.978694769,0.00289479,0.032579745
Cyp3a25,1680.412498,3011.83,2961.85,2504.94,547.85,721.93,620.98,-2.115041507,0.569132464,-3.716255251,0.000202197,0.005313721
Cyp3a44,159.6876529,311,175,285,41,46,26,-2.660732863,0.668670302,-3.979140174,6.92E-05,0.002404585
Ddx60,4532.224728,1559,1614,2126,14848,7677,6475,2.452932091,0.623101513,3.936649227,8.26E-05,0.002720544
Dhx58,1000.530084,263.99,246,403,3026,1976,1403,2.818476179,0.515136954,5.471314293,4.47E-08,8.06E-06
Dio1,1752.196329,2914,2564,2272,448,736,342,-2.29279672,0.726660645,-3.155250989,0.001603601,0.022168309
Dmp1,15.98083492,4,5,7,38,20,41,2.682775256,0.735022952,3.649920385,0.000262322,0.006423973
Dppa3,16.90865408,11,3,9,18,32,36,2.003157834,0.694361203,2.884893086,0.003915466,0.040035918
Fbp1,719.1256296,883,1325,860,105,155,71,-3.179585418,0.780233774,-4.075170189,4.60E-05,0.001806633
Fosl1,13.2299321,2.78,0,4.62,26.07,20.98,19.67,3.114003316,1.020750971,3.050698363,0.002283098,0.027994076
G6pc,2341.364293,3228,4353,4264,206,422,135,-3.927900246,0.990615849,-3.965109431,7.34E-05,0.002513796
Gbp3,707.4803899,340.94,282.67,245.91,2049.22,1134.67,1180.64,2.36574175,0.326392147,7.24815768,4.22E-13,3.11E-10
Gbp7,741.8779437,403,308,348,2054.33,1232,918,2.010905901,0.337917221,5.950883171,2.67E-09,7.61E-07
Gm10804,8.113743942,2,6,3,14,22,8,2.30837489,0.771932711,2.990383564,0.002786273,0.03201046
Gm12185,11.21522568,0,9.11,0,25.99,24.27,12.09,2.78042778,0.85270617,3.260710287,0.001111335,0.017281899
Gm12250,334.7369072,67.5,39,79.5,1139,661.5,541,3.667626866,0.716879178,5.11610182,3.12E-07,3.73E-05
Gm12250_1,334.7369072,67.5,39,79.5,1139,661.5,541,3.667626866,0.716879178,5.11610182,3.12E-07,3.73E-05
Gm14137,674.4966169,338,218,307,1813,1262,888,2.228677938,0.305211235,7.302083546,2.83E-13,2.18E-10
Gm20559,2549.834318,702,1011,1430,5892,3955,3125,2.037123187,0.268866464,7.576709838,3.54E-14,3.69E-11
Gm30262,20.86026108,6,1,8,42,25,42,2.965839508,0.764209703,3.880923645,0.000104061,0.00319426
Gm30311,15.38452505,7,4,1,49,26,50,3.732682562,0.875277373,4.264571068,2.00E-05,0.000991952
Gm30352,10.28168832,6,4,2,10,23,6,2.413822367,0.769544262,3.136690749,0.001708662,0.023026571
Gm31624,134.2836828,39.63,49.29,66.2,358.05,229.65,176.3,2.310977601,0.355672072,6.497495249,8.17E-11,3.61E-08
Gm32263,28.87110451,7,7,11,52,48,28,2.383153586,0.508015822,4.691101112,2.72E-06,0.000221411
Gm34156,20.76371786,9,10,12,74,44,30,2.265513343,0.542479997,4.176215443,2.96E-05,0.001336896
Gm36043,22.39368309,6,5,8,44,47,18,2.592474169,0.54942622,4.718511923,2.38E-06,0.000197455
Gm36430,33.70116116,8.58,14.07,11,89.63,77.13,43.86,2.654561341,0.444969772,5.965711618,2.44E-09,7.06E-07
Gm36482,20.71544278,25,34,30,0,4,2,-3.83454363,0.741236461,-5.173171896,2.30E-07,3.06E-05
Gm38679,9.765808857,5,23,11,1,2,0,-3.695084162,1.120624421,-3.297343957,0.000976039,0.015677193
Gm40863,46.56114494,11,29,20,129,98,51,2.204583022,0.580300868,3.79903451,0.000145261,0.004102807
Gm40996,7.552265108,1,3,3,17,11,11,2.50677559,0.78175786,3.20658828,0.001343191,0.019807304
Gm41348,16.34506371,1,2,0,47.98,35.96,11,4.986263686,1.154009499,4.320816847,1.55E-05,0.000827879
Gm4151,14.75417782,8,5,6,45,29,29,2.108275513,0.664545596,3.172506935,0.001511289,0.021376888
Gm51741,63.94110977,16,46,26,190,137,67,2.14870224,0.534397039,4.020797431,5.80E-05,0.002149809
Gm51911,10.56499502,1,1.33,1.67,31,27,10,4.097892873,0.982499275,4.170886409,3.03E-05,0.001351314
Gm51911_1,10.56499502,1,1.33,1.67,31,27,10,4.097892873,0.982499275,4.170886409,3.03E-05,0.001351314
Gm52670,269.5611353,111.02,190.43,129.73,898.38,559.95,287.43,2.004994408,0.564106489,3.554283539,0.00037901,0.008054426
Gm9909,15.27763996,7,7,5,26,21,24,2.008639724,0.511862245,3.92418027,8.70E-05,0.002812978
Gnb1l_1,9.062110801,0,0,0,32.08,15.93,23.79,7.065075574,1.580322246,4.470655015,7.80E-06,0.000473805
Gzmc,15.44362302,7,1,2,25,17,9,2.398448011,0.75784687,3.164818786,0.001551796,0.021689564
H2-Q5_1,15.03682403,2.36,5.89,7.31,30.23,23.14,13.76,2.169957832,0.622224141,3.487421475,0.000487702,0.009477826
Hba-a2,387.93373,81.49,175.57,83.86,290.51,667.99,407.49,2.050377263,0.714390052,2.870108923,0.004103304,0.041362898
Hmgcs2,801.4831013,2902,805,1535,410,231,265,-2.460982211,0.740907544,-3.321578019,0.0008951,0.014804729
Ifi204,327.5294082,126.11,59.05,80.23,1015.44,555.27,575.28,3.086399238,0.655634471,4.70749995,2.51E-06,0.000206766
Ifi44,1116.508413,101,70,139,4543,2199,2715,4.947160704,0.865139778,5.718336887,1.08E-08,2.47E-06
Ifit1,7673.556513,1769.99,2024.23,3935.94,21824.94,13146.57,10261.91,2.545436933,0.715034369,3.559880538,0.000371024,0.007940764
Ifit1bl1,21549.2156,9304,5540,8510.04,62626,38723.85,30192,2.534676144,0.549883171,4.609481212,4.04E-06,0.000285322
Ifit2,2497.253485,302,194,361,10845,5970,4400,4.677194643,0.695453928,6.725383889,1.75E-11,9.99E-09
Ifit3,3166.64499,549.61,431.87,750.65,10985.54,7056.37,5226.65,3.759269065,0.72653204,5.174264665,2.29E-07,3.06E-05
Ifit3b,624.1982694,120.39,153.13,145.35,2032.46,1442.63,1091.35,3.484205554,0.386001352,9.026407649,1.77E-19,7.84E-16
Igtp,941.7706085,200.7,178.5,293.74,2784.28,2061.3,1361.67,3.218495309,0.623738423,5.160008093,2.47E-07,3.19E-05
Igtp_1,941.7706085,200.7,178.5,293.74,2784.28,2061.3,1361.67,3.218495309,0.623738423,5.160008093,2.47E-07,3.19E-05
Irgm1,2704.064115,1333,964.48,1406,7253,4308,4243.89,2.134228837,0.499556598,4.272246321,1.94E-05,0.000969268
Irgm2,1239.357078,474.59,384,636.51,3032.51,2255.4,1432.42,2.182447282,0.519228545,4.20324981,2.63E-05,0.001217813
Klkb1,51.10797208,26,101,51,9,19,14,-2.044901124,0.684795246,-2.986149708,0.002825143,0.032205901
Krt13,9.583954699,6,5,1,17,27,16,2.291852522,0.770157951,2.975821414,0.00292205,0.032782208
Lct,2260.347596,314,2426,1742,18,62,79,-4.747509724,1.501796528,-3.161220335,0.001571096,0.021855664
Lgals3bp,19836.96665,6855,7330,11094,45891,36021,22577,2.056411589,0.319230764,6.44177134,1.18E-10,5.09E-08
LOC115489411,10.56499502,1,1.33,1.67,31,27,10,4.097892873,0.982499275,4.170886409,3.03E-05,0.001351314
Ly6a,7753.223192,1997,834,1352,23467,15457,11842,3.648453319,0.685481989,5.322464158,1.02E-07,1.60E-05
Ly6d,5384.622771,2381,961,1027,8428,9206,7464,2.611047472,0.672365934,3.883372639,0.000103018,0.003179674
Ly6e,9415.925298,3457,2803,4421,21080,17081,10512,2.210801328,0.250110986,8.83928116,9.63E-19,3.41E-15
Ly6g,10.32811402,2,0,3,45,5,3,3.316132446,1.163775403,2.849460846,0.00437934,0.043089095
Mx2,565.1954975,117.26,135,189.43,2040,1076.48,871.45,3.174544093,0.563364355,5.63497507,1.75E-08,3.60E-06
Nlrc5,836.8536416,155,207,307,2779,1700,1317,3.103938429,0.312375596,9.936558655,2.89E-23,2.55E-19
Oas1a,6549.794025,2037.46,1938.02,3051.78,16559.65,11139.54,10433.2,2.466148135,0.543308906,4.539127017,5.65E-06,0.000368545
Oas1b,301.0534673,51,77,123,874,573,404,2.878412008,0.368570206,7.809670884,5.73E-15,7.24E-12
Oas1g,3439.002411,1026.54,1038.98,1472.22,9073.35,5686.46,5453.8,2.535448997,0.546128689,4.642585252,3.44E-06,0.00025778
Oas1h,12.36100331,1,4,7,28,33,13,2.737699557,0.721075041,3.796691607,0.00014664,0.004135155
Oas2,2853.327773,174,197,487,11948,6013,4685,4.701830669,0.893701967,5.261072309,1.43E-07,2.14E-05
Oas3,3055.311212,368,488,1105,9519,6275,4893,3.390166116,0.751177707,4.51313462,6.39E-06,0.000406259
Oasl1,10383.10302,4489,4370,5537,26697,18968,13788,2.064734582,0.301940418,6.838218605,8.02E-12,4.89E-09
Oasl2,10706.15099,2481,2390,4935,29554,19637,15991,2.753225309,0.643430073,4.278981391,1.88E-05,0.000943073
Olfr658,8.415226058,1,0,4,31,17.34,12,3.582072286,1.172898996,3.054033039,0.002257872,0.027819817
Osm,21.12067973,2,2,9,8,26,17,2.033255346,0.659527951,3.082894881,0.002049976,0.025963909
Oxct2b,14.94585578,3.55,6.84,6.12,37.73,30.4,20.65,2.412103474,0.599633636,4.022628704,5.76E-05,0.002142274
Phf11a,22.94600992,6,6,9,70.19,28,53,2.838568069,0.540041055,5.25620792,1.47E-07,2.17E-05
Phf11b,192.8588299,45.17,39,63.26,504.53,292.58,325.54,2.940786907,0.260734459,11.27885788,1.67E-29,2.95E-25
Phf11d,184.2955284,71.21,56.92,63.85,650.12,291.39,322.3,2.740460606,0.421084724,6.50809789,7.61E-11,3.45E-08
Pla2g2e,55.67982333,20,10,13,111,121,77,2.887448403,0.50876395,5.67541864,1.38E-08,3.08E-06
Pla2g4c,1512.550495,236,220,211,2438,263,917,2.515508191,0.779609569,3.226625599,0.001252592,0.018784637
Plaur,847.3222401,396,298,408,1542,1907,873,2.001709811,0.483344109,4.141376245,3.45E-05,0.001460282
Prl2c2,12.4186299,1.91,3,7,12,21,21.89,2.257677361,0.757410204,2.98078551,0.002875101,0.032544596
Prrg4,68.72114254,27,26,20,110,98,98,2.131215839,0.379669415,5.61334613,1.98E-08,4.03E-06
Rnf213,24230.90703,8670.84,9669.98,14312.83,66767.35,45996.58,28335.8,2.112273562,0.446549934,4.730206863,2.24E-06,0.000190658
Rnf225,39.76949139,17,18,17,100,87,68,2.334335952,0.340085469,6.863968518,6.70E-12,4.23E-09
Rsad2,4149.806244,351,548,900,15685,10569,6079,4.151418804,0.81082315,5.120005273,3.06E-07,3.73E-05
Rtp4,1664.172243,362,339,773,4425,2572,2512,2.723971344,0.606323908,4.492600914,7.04E-06,0.000434968
S100g,301.1555649,880,432,495,86,74,78,-2.847256374,0.3411143,-8.346927616,7.01E-17,1.75E-13
Serpina1f,27.61659287,21,44.91,46,3,13,8,-2.157708578,0.720816496,-2.99342286,0.002758672,0.031817408
Slc17a3,10.33391992,17,21,14,4,5,2,-2.163539943,0.687180181,-3.148431813,0.00164149,0.022481167
Slc6a20b,47.16027463,57.75,119.29,78.26,15.4,9.33,13.43,-2.754491074,0.49227864,-5.595390197,2.20E-08,4.32E-06
Slfn1,48.8764304,8.33,10,14,117,97.33,67,3.160165778,0.424212946,7.449479812,9.37E-14,7.89E-11
Slfn1_2,48.8764304,8.33,10,14,117,97.33,67,3.160165778,0.424212946,7.449479812,9.37E-14,7.89E-11
Slfn1_3,48.8764304,8.33,10,14,117,97.33,67,3.160165778,0.424212946,7.449479812,9.37E-14,7.89E-11
Slfn10-ps_3,58.87972763,29.32,22.5,8.08,85.46,143.85,87.45,2.488938399,0.417109794,5.967106108,2.41E-09,7.06E-07
Slfn2,2111.806324,853,450.48,824.06,4904.74,3716.25,3182.55,2.517398718,0.302633822,8.318299332,8.92E-17,1.75E-13
Slfn4,16860.8129,1941,2248,3409,65720.3,40209.56,26448.95,4.109975629,0.553039986,7.43160664,1.07E-13,8.62E-11
Slfn5,1425.683227,290.52,207.69,317.95,5195.26,3185.18,2242.34,3.716825926,0.692316237,5.368682296,7.93E-08,1.30E-05
Slfn5_1,18.62072986,2.71,1.43,6.16,68.27,33.79,29.98,3.736467951,0.722804441,5.169403701,2.35E-07,3.10E-05
Slfn5_2,68.87223368,16.77,9.63,16.88,229.94,164.44,104.58,3.528736003,0.583382595,6.048750911,1.46E-09,4.53E-07
Slfn5_3,10.41455539,0,3.25,0,31.52,25.59,25.1,4.817824188,1.172220662,4.109997669,3.96E-05,0.00161938
Sp100,1909.293561,515.25,593.08,951.43,4023.38,2827.87,2457.57,2.189301583,0.274308557,7.981164003,1.45E-15,2.56E-12
Spats2l,2213.06114,1049,925,1131,5592,3876,2936,2.033669885,0.311831999,6.521684402,6.95E-11,3.32E-08
Sprr2i,17.67821391,8,2,0,33,29,15,3.022749054,0.908523174,3.327101762,0.000877543,0.014596276
Stc1,42.76144708,20,13,12,89,37,98,2.395367154,0.583245677,4.106960834,4.01E-05,0.001626445
Tap1,1631.9014,670.5,600.64,834,3999,3110.5,1807.69,2.096575982,0.269622519,7.775967648,7.49E-15,8.27E-12
Tap1_1,1631.9014,670.5,600.64,834,3999,3110.5,1807.69,2.096575982,0.269622519,7.775967648,7.49E-15,8.27E-12
Trim30a,2365.983953,383.61,303.47,708.09,7185.99,4148.6,4094.96,3.482994716,0.648801383,5.36835279,7.95E-08,1.30E-05
Trim30b,59.03302035,6.97,14.01,31.34,82.01,86.6,75.89,2.264326112,0.468091007,4.837362992,1.32E-06,0.000121164
Trim30c,45.60531165,8,4,10,95,82,68,3.800459906,0.456460975,8.32592513,8.37E-17,1.75E-13
Usp18,2471.842172,207,205,456,8431,5741,4221,4.407540654,0.837915597,5.26012485,1.44E-07,2.14E-05
Vwa1,385.6618911,378,479,459,83,81,91,-2.196809355,0.639999002,-3.432519969,0.000598,0.011094685
Xaf1,1359.523082,247,333,512,4018,2214,2115,3.092721067,0.568636944,5.438832454,5.36E-08,9.39E-06
Zbp1,3695.650853,1498,884,1560,9232,6503,5575,2.369812911,0.558539962,4.242870824,2.21E-05,0.001063165