Table S5: Differentially expressed genes in high and low risk groups. gene lowMean highMean logFC pValue fdr SEMA3A 1.675416557 0.675727619 -1.310006106 4.96E-18 7.10E-17 C1QTNF3 2.539228467 1.013816544 -1.324593596 3.36E-20 6.95E-19 PDGFC 1.592426111 0.700705936 -1.184345409 1.77E-29 4.78E-27 TCF4 1.417053976 0.693184109 -1.031584227 1.52E-23 6.16E-22 ZEB1 2.087742112 1.04342741 -1.000613276 4.62E-32 3.74E-29 FGF2 1.53388896 0.700154744 -1.131448329 3.48E-21 8.87E-20 PAEP 1.087782337 3.463539129 1.670857068 1.14E-14 8.87E-14 COL8A1 1.845355412 0.807086811 -1.19310294 1.38E-16 1.51E-15 S100A7 0.925642095 1.933327219 1.062559457 0.003353248 0.00517307 CHRDL1 1.755479299 0.763034877 -1.202044077 2.02E-14 1.51E-13 KRT16 0.965474968 2.010654213 1.058354233 0.005714667 0.008494321 ANGPT1 1.40184319 0.650954505 -1.106696355 5.52E-14 3.78E-13 KRTAP19-1 0.801700938 2.305296477 1.523816236 1.55E-24 8.39E-23 ABCA8 1.538743343 0.47697004 -1.689782063 2.26E-21 6.12E-20 EDIL3 1.508437746 0.714381813 -1.0782879 1.93E-12 1.04E-11 PTN 2.409608159 0.994786283 -1.276340041 2.67E-13 1.63E-12 MRGPRX3 1.440003243 0.687782232 -1.066048309 4.20E-05 8.45E-05 AL162457.2 1.196916475 2.966016931 1.309204354 1.08E-21 3.07E-20 FCGR2C 1.877774421 0.903956916 -1.054697842 4.19E-20 8.57E-19 GLIPR1 1.824027837 0.904680956 -1.01164674 2.86E-30 1.12E-27 KRT6B 0.924216439 1.872621462 1.018756641 0.021085721 0.028564562 MAGEA10 1.433353451 0.649583554 -1.141807397 4.48E-06 1.02E-05 HHATL 1.641504045 0.741814584 -1.145887769 6.94E-09 2.27E-08 MEOX2 1.685641971 0.698069076 -1.271856433 7.54E-11 3.22E-10 AL035541.1 0.98274315 1.981595617 1.011776274 5.29E-08 1.53E-07 GPC6 1.531959671 0.75468932 -1.021423555 6.52E-17 7.66E-16 AKAP6 1.999784464 0.927650026 -1.108191986 1.56E-18 2.44E-17 ALDH3B2 0.907667559 2.064242107 1.185376289 1.60E-13 1.02E-12 HS3ST2 0.682580177 1.379554777 1.015132318 1.86E-14 1.40E-13 SPRR1B 0.873055532 1.771474859 1.020805665 0.000512687 0.000887731 AC093787.1 1.896346716 0.707707343 -1.421997968 1.77E-17 2.33E-16 STRA6 1.786728889 0.89015596 -1.005190712 5.63E-12 2.83E-11 KRT6C 0.620994235 1.467076809 1.240292626 0.002152877 0.003409213 GNAL 0.687506674 1.413698274 1.040028614 2.72E-15 2.34E-14 SERPINA5 2.419640228 1.123713203 -1.106518678 9.91E-14 6.49E-13 POU3F1 0.973650754 2.071462254 1.089173253 3.30E-20 6.85E-19 SLC7A4 0.70391991 2.007714796 1.512071145 9.59E-16 9.00E-15 NTN4 1.676673687 0.803966993 -1.060393762 3.18E-24 1.60E-22 OCA2 0.84442021 3.112452423 1.882018772 2.08E-26 2.09E-24 MIR100HG 2.053043804 0.83260485 -1.302060542 1.35E-30 6.45E-28 MAPK4 0.634011308 1.411849899 1.15500624 1.14E-06 2.80E-06 SLC16A6 1.24067016 2.728193583 1.1368264 1.38E-13 8.86E-13 INHBA 1.465344177 0.707659221 -1.05011287 1.03E-14 8.09E-14 TRPM1 1.742503966 3.610948913 1.05121607 3.39E-24 1.66E-22 AL159166.1 0.558813427 1.610686874 1.527237462 1.82E-14 1.37E-13 MMP16 2.157600934 0.917294304 -1.233971465 3.20E-22 1.02E-20 TMEM47 1.920348365 0.817431051 -1.232199099 5.81E-26 4.93E-24 GDNF 1.757920591 0.707529928 -1.313006823 2.32E-18 3.53E-17 TYRP1 2.701804757 5.649477663 1.064194062 5.47E-17 6.52E-16 LINC00520 1.195486523 2.713591867 1.182605885 7.92E-18 1.10E-16 MAGEA4 1.467855605 0.683655885 -1.102367816 0.000369581 0.000652791 KRTDAP 0.665339391 1.527968484 1.199452431 0.000471676 0.000821525