Description: Summary of the genomes of human-host invasive Escherichia and Shigella. All genome were downloaded from NCBI database.,,,,,,,,
Strain,GenBank ID,Bioproject,BioSample,Host,Host disease,Number of plasmids,Genome length,Link
Escherichia coli 8-3-Ti3,GCA_012221565.1,PRJNA616136,SAMN14482836,Human,Crohn's disease,2,5141082,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/12/221/565/GCA_012221565.1_ASM1222156v1
Escherichia coli CFSAN029787,GCA_001007915.1,PRJNA243331,SAMN03612246,Human,,2,5288947,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/7/915/GCA_001007915.1_ASM100791v1
Escherichia coli NCTC9031,GCA_900449655.1,PRJEB6403,SAMEA3446332,,,,4939018,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/449/655/GCA_900449655.1_39220_D01
Shigella boydii CDC 3083-94,GCA_000020185.1,PRJNA15637,SAMN02604039,,,5,4874659,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/20/185/GCA_000020185.1_ASM2018v1
Shigella boydii Sb227,GCA_000012025.1,PRJNA13146,SAMN02603601,,,1,4646520,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/12/25/GCA_000012025.1_ASM1202v1
Shigella boydii strain 54-1621,GCA_002949455.1,PRJNA218110,SAMN08518226,,,0,4531304,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/455/GCA_002949455.1_ASM294945v1
Shigella boydii strain 59-248,GCA_002949475.1,PRJNA218110,SAMN08330253,,,1,4887224,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/475/GCA_002949475.1_ASM294947v1
Shigella boydii strain 59-2708,GCA_002949495.1,PRJNA218110,SAMN08330252,,,0,4856857,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/495/GCA_002949495.1_ASM294949v1
Shigella boydii strain 600080,GCA_013394495.1,PRJNA607768,SAMN14145978,Homo sapiens ,Diarrhea ,1,4628191,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/394/495/GCA_013394495.1_ASM1339449v1
Shigella boydii strain 600657,GCA_013394535.1,PRJNA607765,SAMN14145980,Homo sapiens ,Diarrhea ,3,4833494,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/394/535/GCA_013394535.1_ASM1339453v1
Shigella boydii strain 600690,GCA_013394515.1,PRJNA607767,SAMN14145979,Homo sapiens ,Diarrhea ,2,5043708,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/394/515/GCA_013394515.1_ASM1339451v1
Shigella boydii strain 602068,GCA_013394555.1,PRJNA607764,SAMN14145981,Homo sapiens ,Diarrhea ,1,4758031,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/394/555/GCA_013394555.1_ASM1339455v1
Shigella boydii strain 83-578,GCA_002949535.1,PRJNA218110,SAMN08330255,,,1,4702611,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/535/GCA_002949535.1_ASM294953v1
Shigella boydii strain ATCC 35964,GCA_002950035.1,PRJNA218110,SAMN01916925,Homo sapiens ,,1,5295594,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/35/GCA_002950035.1_ASM295003v1
Shigella boydii strain ATCC 49812,GCA_002950135.1,PRJNA218110,SAMN08330251,,,1,5320147,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/135/GCA_002950135.1_ASM295013v1
Shigella boydii strain ATCC 8700,GCA_002946735.1,PRJNA218110,SAMN08330244,,,2,4525323,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/946/735/GCA_002946735.1_ASM294673v1
Shigella boydii strain ATCC 9210,GCA_001027225.1,PRJNA284097,SAMN03699691,Homo sapiens ,Dysentery,0,4574246,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/27/225/GCA_001027225.1_ASM102722v1
Shigella boydii strain ATCC BAA-1247,GCA_002950275.1,PRJNA218110,SAMN04347325,,,1,4802297,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/275/GCA_002950275.1_ASM295027v1
Shigella boydii strain KCCM 41690,GCA_007106565.1,PRJNA553274,SAMN12233447,,,1,4678370,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/7/106/565/GCA_007106565.1_ASM710656v1
Shigella boydii strain NCTC 9353,GCA_002950315.1,PRJNA218110,SAMN08330250,,,1,4634866,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/315/GCA_002950315.1_ASM295031v1
Shigella boydii strain NCTC 9733,GCA_002950375.1,PRJNA218110,SAMN08330247,,,1,5163028,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/375/GCA_002950375.1_ASM295037v1
Shigella boydii strain NCTC 9850,GCA_002949175.1,PRJNA218110,SAMN08330245,,,1,4726294,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/175/GCA_002949175.1_ASM294917v1
Shigella dysenteriae 1617,GCA_000497505.1,PRJNA218020,SAMN05771127,Homo sapiens ,,1,4480198,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/497/505/GCA_000497505.1_ASM49750v1
Shigella dysenteriae Sd197,GCA_000012005.1,PRJNA13145,SAMN02603600,,,2,4560911,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/12/5/GCA_000012005.1_ASM1200v1
Shigella dysenteriae strain 07-3308,GCA_002949755.1,PRJNA218110,SAMN08330257,,,1,4452486,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/755/GCA_002949755.1_ASM294975v1
Shigella dysenteriae strain 08-3380,GCA_002949815.1,PRJNA218110,SAMN08330259,,,1,4647405,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/815/GCA_002949815.1_ASM294981v1
Shigella dysenteriae strain 2017C-4522,GCA_002949415.1,PRJNA218110,SAMN08330268,,,1,4679231,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/415/GCA_002949415.1_ASM294941v1
Shigella dysenteriae strain 53-3937,GCA_002949775.1,PRJNA218110,SAMN08330258,,,1,4449807,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/775/GCA_002949775.1_ASM294977v1
Shigella dysenteriae strain 69-3818,GCA_002949715.1,PRJNA218110,SAMN08518227,,,2,4707813,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/715/GCA_002949715.1_ASM294971v1
Shigella dysenteriae strain 79-8006,GCA_010231685.1,PRJNA218110,SAMN10702678,,,1,4753362,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/10/231/685/GCA_010231685.1_ASM1023168v1
Shigella dysenteriae strain 80-547,GCA_002949855.1,PRJNA218110,SAMN08518228,,,1,4595581,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/855/GCA_002949855.1_ASM294985v1
Shigella dysenteriae strain ATCC 12037,GCA_002950015.1,PRJNA218110,SAMN08330265,,,1,4858602,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/15/GCA_002950015.1_ASM295001v1
Shigella dysenteriae strain ATCC 12039,GCA_002950055.1,PRJNA218110,SAMN08330266,,,1,5061835,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/55/GCA_002950055.1_ASM295005v1
Shigella dysenteriae strain ATCC 13313,GCA_002949675.1,PRJNA218110,SAMN08330256,,,1,4578459,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/675/GCA_002949675.1_ASM294967v1
Shigella dysenteriae strain ATCC 49346,GCA_002950075.1,PRJNA218110,SAMN01916923,Homo sapiens ,,1,4843745,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/75/GCA_002950075.1_ASM295007v1
Shigella dysenteriae strain ATCC 49347,GCA_002950095.1,PRJNA218110,SAMN01916924,Homo sapiens ,,1,4783601,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/95/GCA_002950095.1_ASM295009v1
Shigella dysenteriae strain ATCC 9751,GCA_002949915.1,PRJNA218110,SAMN08330261,,,0,4699491,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/915/GCA_002949915.1_ASM294991v1
Shigella dysenteriae strain ATCC 9752,GCA_002950115.1,PRJNA218110,SAMN08330264,,,1,4377003,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/115/GCA_002950115.1_ASM295011v1
Shigella dysenteriae strain ATCC 9753,GCA_002950155.1,PRJNA218110,SAMN08330262,,,1,4932324,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/155/GCA_002950155.1_ASM295015v1
Shigella dysenteriae strain ATCC 9754,GCA_002950175.1,PRJNA218110,SAMN08330263,,,1,4694914,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/175/GCA_002950175.1_ASM295017v1
Shigella dysenteriae strain BU53M1,GCA_002741615.1,PRJNA218110,SAMN07702429,,,3,4764892,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/741/615/GCA_002741615.1_ASM274161v1
Shigella dysenteriae strain CFSAN010954,GCA_002949875.1,PRJNA218110,SAMN04316454,Homo sapiens ,,0,4971516,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/875/GCA_002949875.1_ASM294987v1
Shigella dysenteriae strain CFSAN010956,GCA_002949935.1,PRJNA218110,SAMN04316456,Homo sapiens ,,1,4782971,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/935/GCA_002949935.1_ASM294993v1
Shigella dysenteriae strain CFSAN029786,GCA_009662135.1,PRJNA541977,SAMN04323531,Homo sapiens ,,4,4949027,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/662/135/GCA_009662135.1_ASM966213v1
Shigella dysenteriae strain E670/74,GCA_002943855.1,PRJNA218110,SAMN01916922,Homo sapiens ,,1,5185765,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/943/855/GCA_002943855.1_ASM294385v1
Shigella dysenteriae strain HNCMB 20080,GCA_015475595.1,PRJNA662859,SAMN16094609,Homo sapiens ,,2,4405684,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/015/475/595/GCF_015475595.1_ASM1547559v1
Shigella dysenteriae strain NCTC 9718,GCA_002949835.1,PRJNA218110,SAMN08330260,,,1,4561740,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/835/GCA_002949835.1_ASM294983v1
Shigella flexneri  NCTC1,GCA_000953035.1,PRJEB6778,SAMEA2434358,,,0,4526576,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/953/35/GCA_000953035.1_NCTC1
Shigella flexneri 1a strain 0228,GCA_001578125.1,PRJNA288250,SAMN03797406,Homo sapiens ,,4,4853344,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/578/125/GCA_001578125.1_ASM157812v1
Shigella flexneri 1a strain 0439,GCA_002240115.1,PRJNA356334,SAMN06111927,Homo sapiens ,,2,4904083,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/240/115/GCA_002240115.1_ASM224011v1
Shigella flexneri 1a strain 0670,GCA_002240135.1,PRJNA377966,SAMN06478366,Homo sapiens ,,2,4899768,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/240/135/GCA_002240135.1_ASM224013v1
Shigella flexneri 1c strain Y394,GCA_002442995.2,PRJNA382451,SAMN06706581,Homo sapiens ,Shigellosis ,2,4816793,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/442/995/GCA_002442995.2_ASM244299v2
Shigella flexneri 2002017,GCA_000022245.1,PRJNA33639,SAMN02603122,,,5,4894492,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/22/245/GCA_000022245.1_ASM2224v1
Shigella flexneri 2003036,GCA_000743955.1,PRJNA186498,SAMN02999960,Homo sapiens ,Shigellosis ,0,4595814,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/743/955/GCA_000743955.1_ASM74395v1
Shigella flexneri 2a str. 2457T,GCA_000007405.1,PRJNA408,SAMN02604096,,,0,4599354,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/7/405/GCA_000007405.1_ASM740v1
Shigella flexneri 2a str. 301,GCA_000006925.2,PRJNA310,SAMN02603599,,,1,4828820,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/6/925/GCA_000006925.2_ASM692v2
Shigella flexneri 2a strain 981,GCA_001580175.1,PRJNA288243,SAMN03796074,Homo sapiens ,,2,4891752,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/580/175/GCA_001580175.1_ASM158017v1
Shigella flexneri 2a strain ATCC 29903,GCA_002950215.1,PRJNA218110,SAMN08330274,,,2,4938295,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/215/GCA_002950215.1_ASM295021v1
Shigella flexneri 2a strain AUSMDU00010535,GCA_009664535.1,PRJNA556438,SAMN13191650,Homo sapiens ,,3,5045617,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/664/535/GCA_009664535.1_ASM966453v1
Shigella flexneri 4c strain 0702,GCA_002240095.1,PRJNA356348,SAMN06112243,,,2,4767656,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/240/95/GCA_002240095.1_ASM224009v1
Shigella flexneri 4c strain 1205,GCA_001579965.1,PRJNA288251,SAMN03797408,Homo sapiens ,,3,5196066,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/579/965/GCA_001579965.1_ASM157996v1
Shigella flexneri 4c strain 1602,GCA_002240075.1,PRJNA356350,SAMN06112245,,,2,4980844,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/240/75/GCA_002240075.1_ASM224007v1
Shigella flexneri 5 str. 8401,GCA_000013585.1,PRJNA16375,SAMN02603604,,,0,4574284,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/13/585/GCA_000013585.1_ASM1358v1
Shigella flexneri 5a str. M90T,GCA_004799585.1,PRJNA510559,SAMN10608416,Homo sapiens ,Dysentery,1,4828909,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/4/799/585/GCA_004799585.1_ASM479958v1
Shigella flexneri 7b strain 94-3007,GCA_002741635.1,PRJNA218110,SAMN07702430,,,3,4906368,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/741/635/GCA_002741635.1_ASM274163v1
Shigella flexneri C32,GCA_007197595.1,PRJNA553848,SAMN12252210,,,2,5126771,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/7/197/595/GCA_007197595.1_ASM719759v1
Shigella flexneri G1663,GCA_001021855.1,PRJNA231092,SAMN02440121,,,1,4817311,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/21/855/GCA_001021855.1_ASM102185v1
Shigella flexneri isolate 83 ,GCA_904066025.1,PRJEB39785,SAMEA7160008,Homo sapiens ,,2,4825805,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/904/066/025/GCA_904066025.1_83
Shigella flexneri Shi06HN006,GCA_000743995.1,PRJNA186503,SAMN02999961,Homo sapiens ,Shigellosis ,0,4620903,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/743/995/GCA_000743995.1_ASM74399v1
Shigella flexneri strain 04-3145,GCA_002949255.1,PRJNA218110,SAMN08330280,,,1,4640240,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/255/GCA_002949255.1_ASM294925v1
Shigella flexneri strain 2013C-3749,GCA_010231485.1,PRJNA218110,SAMN10702679,,,2,4948477,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/10/231/485/GCA_010231485.1_ASM1023148v1
Shigella flexneri strain 2016AM-0877,GCA_003719775.1,PRJNA218110,SAMN10260858,,,1,4941302,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/3/719/775/GCA_003719775.1_ASM371977v1
Shigella flexneri strain 5908.2,GCA_009931475.1,PRJNA578858,SAMN13075196,Homo sapiens ,Diarrhea ,1,4686959,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/931/475/GCA_009931475.1_ASM993147v1
Shigella flexneri strain 61-4982,GCA_002950235.1,PRJNA218110,SAMN08330275,,,1,4691171,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/235/GCA_002950235.1_ASM295023v1
Shigella flexneri strain 64-5500,GCA_002949515.1,PRJNA218110,SAMN08330278,,,1,4841193,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/515/GCA_002949515.1_ASM294951v1
Shigella flexneri strain 74-1170,GCA_002950255.1,PRJNA218110,SAMN08330276,,,1,4984826,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/255/GCA_002950255.1_ASM295025v1
Shigella flexneri strain 89-141,GCA_002946695.1,PRJNA218110,SAMN08330283,,,1,4726552,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/946/695/GCA_002946695.1_ASM294669v1
Shigella flexneri strain 98-3193,GCA_002949695.1,PRJNA218110,SAMN08330279,,,0,4508802,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/695/GCA_002949695.1_ASM294969v1
Shigella flexneri strain AR-0423,GCA_008727275.1,PRJNA562719,SAMN12648973,,,2,4852785,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/8/727/275/GCA_008727275.1_ASM872727v1
Shigella flexneri strain AR-0424,GCA_008727255.1,PRJNA562719,SAMN12648974,,,2,4899792,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/8/727/255/GCA_008727255.1_ASM872725v1
Shigella flexneri strain AR-0425,GCA_008727235.1,PRJNA562719,SAMN12648975,,,2,4787823,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/8/727/235/GCA_008727235.1_ASM872723v1
Shigella flexneri strain AUSMDU00008332 ,GCA_900659665.1,PRJEB30677,SAMEA5210151,Homo sapiens ,,2,4943933,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/659/665/GCA_900659665.1_AUSMDU00008332
Shigella flexneri strain AUSMDU00008355 ,GCA_900659645.1,PRJEB30677,SAMEA5210150,Homo sapiens ,,2,4615655,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/659/645/GCA_900659645.1_AUSMDU00008355
Shigella flexneri strain AUSMDU00021847 ,GCA_903987005.1,PRJEB39384,SAMEA7060415,Homo sapiens ,,2,4829585,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/987/005/GCA_903987005.1_AUSMDU00021847
Shigella flexneri strain AUSMDU00022017 ,GCA_903987015.1,PRJEB39384,SAMEA7060416,Homo sapiens ,,2,4839307,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/987/015/GCA_903987015.1_AUSMDU00022017
Shigella flexneri strain FC906,GCA_002174695.2,PRJNA385907,SAMN06920481,Homo sapiens ,Diarrhea ,0,4655489,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/174/695/GCA_002174695.2_ASM217469v2
Shigella flexneri strain FDAARGOS_535,GCA_003855135.1,PRJNA231221,SAMN10163230,Homo sapiens ,,6,4872568,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/3/855/135/GCA_003855135.1_ASM385513v1
Shigella flexneri strain FDAARGOS_691,GCA_013364115.1,PRJNA231221,SAMN11056406,Homo sapiens ,,2,4543799,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/364/115/GCA_013364115.1_ASM1336411v1
Shigella flexneri strain FDAARGOS_74,GCA_000783735.2,PRJNA231221,SAMN02934526,Homo sapiens ,Diarrhea ,1,4805861,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/783/735/GCA_000783735.2_ASM78373v2
Shigella flexneri strain M2901,GCA_013402835.1,PRJNA599490,SAMN13753499,Homo sapiens ,Shigellosis ,4,4995595,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/402/835/GCA_013402835.1_ASM1340283v1
Shigella flexneri strain NCTC 9728,GCA_002950335.1,PRJNA218110,SAMN08330277,,,1,4646378,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/335/GCA_002950335.1_ASM295033v1
Shigella flexneri strain SFL1520,GCA_004171185.1,PRJNA492813,SAMN10106138,Homo sapiens ,Shigellosis ,0,4575536,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/4/171/185/GCA_004171185.1_ASM417118v1
Shigella flexneri Y strain 93-3063,GCA_002949575.1,PRJNA218110,SAMN08330282,,,3,4948068,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/949/575/GCA_002949575.1_ASM294957v1
Shigella flexneri Y strain PE577,GCA_008370775.1,PRJNA533747,SAMN12588114,Homo sapiens ,,2,4598750,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/8/370/775/GCA_008370775.1_ASM837077v1
Shigella sonnei 53G,GCA_000283715.1,PRJEA78129,SAMEA2272161,,,4,5220473,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/283/715/GCA_000283715.1_ASM28371v1
Shigella sonnei SE6-1,GCA_013374815.1,PRJNA639662,SAMN15244675,,,0,4762774,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/374/815/GCA_013374815.1_ASM1337481v1
Shigella sonnei Ss046,GCA_000092525.1,PRJNA13151,SAMN02603602,,,4,5055316,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/0/92/525/GCA_000092525.1_ASM9252v1
Shigella sonnei strain 0401930105,GCA_013146805.1,PRJNA578858,SAMN14133041,Homo sapiens ,,1,4873589,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/805/GCA_013146805.1_ASM1314680v1
Shigella sonnei strain 0401952027,GCA_013146745.1,PRJNA578858,SAMN14133042,Homo sapiens ,,1,4909546,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/745/GCA_013146745.1_ASM1314674v1
Shigella sonnei strain 09163633,GCA_013146765.1,PRJNA578858,SAMN14133045,Homo sapiens ,Diarrhea ,1,4942870,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/765/GCA_013146765.1_ASM1314676v1
Shigella sonnei strain 1205.3131,GCA_013147185.1,PRJNA578858,SAMN14133044,Homo sapiens ,,1,4967371,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/147/185/GCA_013147185.1_ASM1314718v1
Shigella sonnei strain 19.0820.1561,GCA_013147065.1,PRJNA578858,SAMN14133037,Homo sapiens ,Diarrhea ,1,4881506,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/147/65/GCA_013147065.1_ASM1314706v1
Shigella sonnei strain 19.0821.3486,GCA_013146845.1,PRJNA578858,SAMN14133038,Homo sapiens ,Diarrhea ,1,4934123,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/845/GCA_013146845.1_ASM1314684v1
Shigella sonnei strain 19.1125.3493,GCA_013146785.1,PRJNA578858,SAMN14133048,Homo sapiens ,Diarrhea ,1,4873610,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/785/GCA_013146785.1_ASM1314678v1
Shigella sonnei strain 2015AM-1099,GCA_002142635.1,PRJNA218110,SAMN06843643,Homo sapiens ,,0,4935567,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/142/635/GCA_002142635.1_ASM214263v1
Shigella sonnei strain 2015C-3566,GCA_002224625.1,PRJNA218110,SAMN06843644,Homo sapiens ,,1,4949228,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/224/625/GCA_002224625.1_ASM222462v1
Shigella sonnei strain 2015C-3794,GCA_002224605.1,PRJNA218110,SAMN06843645,Homo sapiens ,,1,4906574,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/224/605/GCA_002224605.1_ASM222460v1
Shigella sonnei strain 2015C-3807,GCA_002224465.1,PRJNA218110,SAMN06843646,Homo sapiens ,,2,4929151,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/224/465/GCA_002224465.1_ASM222446v1
Shigella sonnei strain 3123885,GCA_013146725.1,PRJNA578858,SAMN14133047,Homo sapiens ,Diarrhea ,1,4636384,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/146/725/GCA_013146725.1_ASM1314672v1
Shigella sonnei strain 506,GCA_013201485.1,PRJNA278886,SAMN07663113,Homo sapiens ,,12,5344107,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/201/485/GCA_013201485.1_ASM1320148v1
Shigella sonnei strain 6207,GCA_014725795.1,PRJNA599490,SAMN16084720,Homo sapiens ,Shigellosis ,4,5015190,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/725/795/GCA_014725795.1_ASM1472579v1
Shigella sonnei strain 6607.69,GCA_009931515.2,PRJNA578858,SAMN13075194,Homo sapiens ,Diarrhea ,1,4948444,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/931/515/GCA_009931515.2_ASM993151v2
Shigella sonnei strain 6904.27,GCA_009931495.2,PRJNA578858,SAMN13075195,Homo sapiens ,Diarrhea ,1,4873523,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/931/495/GCA_009931495.2_ASM993149v2
Shigella sonnei strain 7111.69,GCA_013147165.1,PRJNA578858,SAMN14133046,Homo sapiens ,Diarrhea ,1,4940233,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/147/165/GCA_013147165.1_ASM1314716v1
Shigella sonnei strain 75/02,GCA_002150905.1,PRJNA369464,SAMN06286561,Homo sapiens ,Shigellosis ,7,5224048,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/150/905/GCA_002150905.1_ASM215090v1
Shigella sonnei strain 866,GCA_003265245.1,PRJNA396190,SAMN07423557,Homo sapiens ,Gastroenteritis ,1,4962707,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/3/265/245/GCA_003265245.1_ASM326524v1
Shigella sonnei strain AR_0030,GCA_003606425.1,PRJNA292901,SAMN04014871,,,2,5133239,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/3/606/425/GCA_003606425.1_ASM360642v1
Shigella sonnei strain AR-0426,GCA_008727215.1,PRJNA562719,SAMN12648976,,,0,4962700,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/8/727/215/GCA_008727215.1_ASM872721v1
Shigella sonnei strain ATCC 29930,GCA_002950395.1,PRJNA218110,SAMN08330284,,,1,4994001,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/950/395/GCA_002950395.1_ASM295039v1
Shigella sonnei strain AUSMDU00008333 ,GCA_900659655.1,PRJEB30677,SAMEA5210148,Homo sapiens ,,3,5006011,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/659/655/GCA_900659655.1_AUSMDU00008333
Shigella sonnei strain AUSMDU00010534,GCA_009664515.1,PRJNA556438,SAMN13191651,Homo sapiens ,,8,5107412,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/664/515/GCA_009664515.1_ASM966451v1
Shigella sonnei strain CFSAN030807,GCA_002442535.1,PRJNA273284,SAMN03612247,Homo sapiens ,,8,5062953,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/442/535/GCA_002442535.1_ASM244253v1
Shigella sonnei strain FC1428,GCA_006843305.1,PRJNA551099,SAMN12139103,Homo sapiens ,Gastroenteritis ,0,4908612,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/6/843/305/GCA_006843305.1_ASM684330v1
Shigella sonnei strain FC1653,GCA_002735385.2,PRJNA414945,SAMN07811411,Homo sapiens ,Diarrhea ,3,4824337,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/2/735/385/GCA_002735385.2_ASM273538v2
Shigella sonnei strain FDAARGOS_524,GCA_003855115.1,PRJNA231221,SAMN10163218,Homo sapiens ,,4,4953095,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/3/855/115/GCA_003855115.1_ASM385511v1
Shigella sonnei strain FDAARGOS_715,GCA_009729995.1,PRJNA231221,SAMN11056430,Homo sapiens ,,5,5109793,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/9/729/995/GCA_009729995.1_ASM972999v1
Shigella sonnei strain FDAARGOS_90,GCA_001558295.2,PRJNA231221,SAMN03996263,Homo sapiens ,Diarrhea ,5,4988340,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/558/295/GCA_001558295.2_ASM155829v2
Shigella sonnei strain FORC_011,GCA_001518855.1,PRJNA272666,SAMN03284775,Homo sapiens ,Diarrhea ,3,5132711,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/518/855/GCA_001518855.1_ASM151885v1
Shigella sonnei strain KCCM 41282,GCA_007106385.1,PRJNA553268,SAMN12233355,Homo sapiens ,,0,4926411,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/7/106/385/GCA_007106385.1_ASM710638v1
Shigella sonnei strain L4094,GCA_013147205.1,PRJNA578858,SAMN14133043,Homo sapiens ,Bloody diarrhea ,1,4969386,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/13/147/205/GCA_013147205.1_ASM1314720v1
Shigella sonnei strain LC1477/18,GCA_004328985.1,PRJNA508357,SAMN10519737,Homo sapiens ,Shigellosis ,3,4905980,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/4/328/985/GCA_004328985.1_ASM432898v1
Shigella sonnei strain UKMCC_1015,GCA_014217935.1,PRJNA643901,SAMN15437744,Homo sapiens ,Shigellosis ,2,4935775,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/14/217/935/GCA_014217935.1_ASM1421793v1
Shigella sp. PAMC 28760,GCA_001596115.1,PRJNA315032,SAMN04548868,lichen ,,0,4558287,https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/1/596/115/GCA_001596115.1_ASM159611v1