Supplementary file 2. CpGs and coefficients for the mouse clocks,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Log-linear transformed mouse clocks; unbiased to the BXDs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
Mus_musculus.GRCm38.,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
,385 clock CPGs,174 clock CPGs,190 clock CPGs,103 clock CPGs,357 clock CPGs,78 clock CPGs,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
ID,CoefPanTissueClock,CoefLiverClock,CoefPanTissueDevelopmentalClock,CoefLiverDevelopmentalClock,CoefPanTissueInterventionalClock,CoefLiverInterventionalClock,SYMBOL,GeneRegionID,seqnames,probeStart,probeEnd,CGstart,CGend,width,strand,seq,annotation,geneChr,geneStart,geneEnd,geneLength,geneStrand,transcriptId,distanceToTSS,flank_txIds,flank_geneIds,flank_gene_distances,genic,Intergenic,Promoter,fiveUTR,threeUTR,Exon,Intron,downstream,distal_intergenic,main_Categories,CpG_number_on_geneRegion,CpGs_number_on_gene,ENTREZID,ENSEMBL,conservationInHuman,CpGislandseqnames,CpGislandstart,CpGislandend,CpGislandwidth,CpGislandstrand,CpGislandlen,CpGislandcount,CpGislandgc,CpGislandoe,CpGislandden,CpGislandpvalue,CpGisland,CG,stackHMM,repeatElements
(Intercept),-2.057973512,-5.763467293,-3.206714574,0.068125751,-4.192489222,-0.380217891,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,,
cg00015319,NA,NA,NA,NA,0.164071836,NA,Hoxc4,Hoxc4_Intergenic_downstream,15,103086525,103086574,103086525,103086526,50,+,CGTTTTATTTGCAGCATCTTTCATGCTGCTGACGATCGTAAAGGGCTTTA,Distal Intergenic,15,103034395,103036852,2458,1,Hoxc4-201,52130,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,32,91,15423,ENSMUSG00000075394,mapped to different genes,15,103086384,103086562,179,*,179,16,0.625698324,0.932291667,0.089385475,9.87E-12,CpGisland,TRUE,,
cg00036788,NA,0.566730536,NA,NA,NA,NA,Gsx2,Gsx2_Intergenic_downstream,5,75084389,75084438,75084389,75084390,50,+,CGTTTAGTCACTGTTTCATTAGGCACTATTTGAACCTTGCAACATGTGGT,Distal Intergenic,5,75075602,75077625,2024,1,Gsx2-202,8787,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,5,10,14843,ENSMUSG00000035946,mapped to different genes,5,75084317,75084390,74,*,74,9,0.716216216,1.009090909,0.121621622,6.35E-08,CpGisland,TRUE,BivProm2,
cg00096922,NA,NA,NA,NA,-0.002857679,NA,Dlx5,Dlx5_fiveUTR,6,6882079,6882128,6882127,6882128,50,-,GACTGCTGGCTGAGGCGCAGCACAGCCTTGGTTAAATCCTTAATTGCGCG,Promoter (<=1kb),6,6877805,6882085,4281,2,Dlx5-201,0,Dlx5-202;Dlx5-201;Dlx5-203,Dlx5;Dlx5;Dlx5,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,6,13395,ENSMUSG00000029755,conserved gene and region,6,6881983,6882197,215,*,215,16,0.655813953,0.763087844,0.074418605,1.72E-10,CpGisland,TRUE,,
cg00114412,NA,NA,-0.074992743,-0.346758073,NA,NA,Rgs6,Rgs6_threeUTR,12,83150163,83150212,83150211,83150212,50,+,TCCTAAAAACACAATTGCCTAGTGCTGCTGGCGCAGAGTCAGAATGGCCG,3' UTR,12,82616636,83157971,541336,1,Rgs6-209,533527,Rgs6-209;Rgs6-203;Rgs6-216;Rgs6-222;Rgs6-208;Rgs6-205;Rgs6-206;Rgs6-204;Rgs6-207;Rgs6-220,Rgs6;Rgs6;Rgs6;Rgs6;Rgs6;Rgs6;Rgs6;Rgs6;Rgs6;Rgs6,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,4,5,50779,ENSMUSG00000021219,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,SINE
cg00134217,NA,NA,NA,0.244500909,NA,NA,Agbl5,Agbl5_Exon,5,30890175,30890224,30890175,30890176,50,+,CGCTGTGGGGGATTGCTGTTCAGTTCTCGCTTTGATTCAGGGAATCTAGC,"Exon (Agbl5-203/Agbl5, exon 2 of 4)",5,30888694,30891207,2514,1,Agbl5-203,1481,Agbl5-203;Agbl5-201;Agbl5-207;Agbl5-213;Agbl5-205;Agbl5-218;Agbl5-214;Agbl5-208;Agbl5-215;Agbl5-211;Agbl5-209;Agbl5-202;Agbl5-204;Agbl5-210;Agbl5-217;Agbl5-216;Agbl5-212,Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5;Agbl5,0;0;0;0;0;0;0;0;0;0;0;0;0;-58;0;-4773;-4915,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,5,231093,ENSMUSG00000029165,conserved gene and region,,,,,,,,,,,,,TRUE,Tx3,
cg00153046,NA,NA,NA,NA,-1.945951944,-0.571984906,Nfat5,Nfat5_threeUTR,8,107372970,107373019,107372970,107372971,50,-,CGTTCAAGTTTTGGATGGTTTATATCTAATGTGTGTTTCATTTTTTTGGA,3' UTR,8,107293470,107379516,86047,1,Nfat5-214,79500,Nfat5-213;Nfat5-214;Nfat5-206;Nfat5-211;Nfat5-203;Nfat5-201;Nfat5-202;Nfat5-207;Nfat5-208,Nfat5;Nfat5;Nfat5;Nfat5;Nfat5;Nfat5;Nfat5;Nfat5;Nfat5,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,13,17,54446,ENSMUSG00000003847,conserved gene and region,,,,,,,,,,,,,TRUE,Tx4,
cg00156720,NA,NA,NA,NA,-0.446738262,NA,Gm44690,Gm44690_Intergenic_upstream,7,69950218,69950267,69950218,69950219,50,-,CGGTGGTTGGTAGCTAATGAAGGCCCCTTTAGTTTATCTTCATCAATTGT,Distal Intergenic,7,69883979,69884360,382,2,Gm44690-201,-65907,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,15,24,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk4,
cg00158333,NA,NA,0.196337491,NA,NA,NA,Igf2bp1,Igf2bp1_Intron,11,96004885,96004934,96004885,96004886,50,+,CGCCCCACTTTCAAATCAAAATGGCTCAAGCCCCAGGCCCTGGGCGGGAG,"Intron (Igf2bp1-201/Igf2bp1, intron 1 of 14)",11,95957163,96005940,48778,2,Igf2bp1-201,1006,Igf2bp1-201,Igf2bp1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,140486,ENSMUSG00000013415,conserved gene and region,11,96004571,96004886,316,*,316,41,0.699367089,1.068976898,0.129746835,1.42E-36,CpGisland,TRUE,BivProm1,
cg00192066,NA,NA,-0.287204403,NA,NA,NA,Smad1,Smad1_Intron,8,79382027,79382076,79382075,79382076,50,-,AAACATCTTTACAAGTTATATCCTTTTACAAACCAACATATGGTCTCACG,"Intron (Smad1-202/Smad1, intron 1 of 6)",8,79338395,79399518,61124,2,Smad1-202,17442,Smad1-202;Smad1-203;Smad1-201,Smad1;Smad1;Smad1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,17125,ENSMUSG00000031681,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh2,
cg00242883,NA,NA,0.146587418,NA,NA,NA,Prkd1,Prkd1_Intergenic_downstream,12,50259152,50259201,50259152,50259153,50,+,CGAATCCTCCTGGAGACAAAAGAAAGAATTGGTTCCAGTGCCTTTTTCAA,Distal Intergenic,12,50341231,50649098,307868,2,Prkd1-201,389897,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,6,8,18760,ENSMUSG00000002688,conserved gene but different region,,,,,,,,,,,,,TRUE,HET2,
cg00258262,0.030479974,NA,NA,NA,NA,NA,Gm17304,Gm17304_Intron,5,106554673,106554722,106554673,106554674,50,+,CGGGATAGTAGGTGTCCCAAAATGTCTTAATTCAGAGAATTAGTGTTAAC,"Intron (Gm28050-202/Gm28050-202, intron 1 of 2)",5,106609098,106609201,104,1,Gm17304-201,-54376,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,35,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC3,
cg00264615,NA,NA,NA,NA,-0.017875901,NA,Fezf2,Fezf2_Intergenic_downstream,14,12338346,12338395,12338346,12338347,50,+,CGCAGCTGCCTTGAGGTTGTTTATTTCCCAGCGTTTTCTCAAGACTCCTG,Distal Intergenic,14,12342094,12345844,3751,2,Fezf2-203,7449,Fezf2-203;Fezf2-201;Fezf2-202,Fezf2;Fezf2;Fezf2,0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,21,45,54713,ENSMUSG00000021743,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg00295657,NA,NA,NA,NA,0.072736538,NA,Hoxb6,Hoxb6_Intron,11,96298956,96299005,96298956,96298957,50,+,CGCTCCTCCTGGGTGCTATTTGACAATTCCTGCCTCTGCCATTGGTCAGT,"Intron (Hoxb6-202/Hoxb6, intron 1 of 2)",11,96292476,96301569,9094,1,Hoxb6-202,6480,Hoxb5-202;Hoxb5-201;Hoxb6-202;Hoxb6-201,Hoxb5;Hoxb5;Hoxb6;Hoxb6,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,4,16,15414,ENSMUSG00000000690,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg00315292,-0.28436039,NA,NA,NA,NA,NA,Irx4,Irx4_Intergenic_downstream,13,73272093,73272142,73272141,73272142,50,-,ATTAAGCGAGTCTGACAGCAGCATATTCAGGCTCGACAAGGGAACAGGCG,Downstream (2-3kb),13,73260497,73269608,9112,1,Irx4-201,11645,Irx4-202;Irx4-201,Irx4;Irx4,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,6,7,50916,ENSMUSG00000021604,conserved gene and region,13,73271779,73272166,388,*,388,36,0.615979381,0.992750533,0.092783505,1.98E-26,CpGisland,TRUE,ReprPC1,
cg00384342,NA,NA,-0.334016281,NA,NA,NA,Dync1i1,Dync1i1_Intron,6,6005367,6005416,6005367,6005368,50,-,CGTTTTATTTCTGGTGTACTTTCAAACTTGCCTCTGACTTCTGTGCTATT,"Intron (Dync1i1-203/Dync1i1, intron 14 of 16)",6,5725639,6028039,302401,1,Dync1i1-203,279728,Dync1i1-203;Dync1i1-202;Dync1i1-204;Dync1i1-201;Dync1i1-206,Dync1i1;Dync1i1;Dync1i1;Dync1i1;Dync1i1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,9,13426,ENSMUSG00000029757,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC3,
cg00462525,NA,NA,NA,NA,0.233259578,NA,Tbr1,Tbr1_Exon,2,61807272,61807321,61807272,61807273,50,+,CGGACAGATGGTGGTTTTACAGTCCTTGCACAAGTACCAGCCCCGCCTGC,"Exon (Tbr1-201/Tbr1, exon 4 of 6)",2,61804453,61814114,9662,1,Tbr1-201,2819,Tbr1-204;Tbr1-201;Tbr1-202;Tbr1-203,Tbr1;Tbr1;Tbr1;Tbr1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,24,27,21375,ENSMUSG00000035033,conserved gene and region,2,61807120,61807273,154,*,154,15,0.688311688,0.822649573,0.097402597,1.39E-11,CpGisland,TRUE,,
cg00465284,NA,NA,NA,NA,0.889589353,NA,Ctnna2,Ctnna2_Intron,6,77242630,77242679,77242630,77242631,50,+,CGCACAATCGTGAGCAGCTTACGACACTCAGTGAGCAGTAGGTGCCTGTG,"Intron (Ctnna2-204/Ctnna2, intron 8 of 19)",6,76881637,77979699,1098063,2,Ctnna2-204,737020,Ctnna2-204;Ctnna2-205;Ctnna2-202;Ctnna2-201;Lrrtm1-201;Lrrtm1-202;Lrrtm1-203;Lrrtm1-204,Ctnna2;Ctnna2;Ctnna2;Ctnna2;Lrrtm1;Lrrtm1;Lrrtm1;Lrrtm1,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,4,24,12386,ENSMUSG00000063063,conserved gene and region,6,77242605,77243155,551,*,551,46,0.626134301,0.852367501,0.083484574,1.98E-31,CpGisland,TRUE,BivProm2,
cg00474657,NA,NA,-0.003754004,NA,NA,NA,Spns1,Spns1_Exon,7,126375075,126375124,126375123,126375124,50,+,GGATGAAGGATGACCCCAGTGTCACCAGGGACCAGAAGGCAATGCCCCCG,"Exon (Spns1-201/Spns1, exon 3 of 12)",7,126370060,126377450,7391,2,Spns1-201,2326,Spns1-201;Spns1-202;Spns1-203;Spns1-204;Spns1-206;Spns1-211;Spns1-205;Spns1-210;Spns1-209;Spns1-207;Spns1-208;Spns1-212;Spns1-213,Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1;Spns1,0;0;0;0;0;0;-2156;0;-2513;0;-712;0;2297,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,73658,ENSMUSG00000030741,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg00482994,NA,NA,NA,NA,-0.494754581,NA,Brd2,Brd2_threeUTR,17,34114462,34114511,34114462,34114463,50,+,CGGTTCTCCATCTTCCGCTGCAGAAGGAGGCAGCATCAGAAGCTGCACAG,3' UTR,17,34112023,34121747,9725,2,Brd2-203,7236,Brd2-203;Brd2-201;Brd2-207;Brd2-202;Brd2-216;Brd2-204;Brd2-205;Brd2-215;Brd2-209;Brd2-210;Brd2-214;Brd2-206;Brd2-208;Brd2-217;Brd2-219,Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2;Brd2,0;0;0;0;-609;-730;0;0;0;0;0;0;959;1925;2684,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,3,14312,ENSMUSG00000024335,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg00493887,NA,NA,-0.542278852,NA,NA,NA,Dpysl3,Dpysl3_threeUTR,18,43363510,43363559,43363558,43363559,50,+,AGCCATCTTCCATGTAAATATCAGCATAAAAGGACTGATCATCATTGACG,3' UTR,18,43320984,43438286,117303,2,Dpysl3-204,74727,Dpysl3-204;Dpysl3-206;Dpysl3-202;Dpysl3-201,Dpysl3;Dpysl3;Dpysl3;Dpysl3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,2,22240,ENSMUSG00000024501,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg00519323,0.383921727,NA,NA,NA,NA,NA,Gm28267,Gm28267_Intergenic_upstream,9,100325359,100325408,100325359,100325360,50,-,CGATGTCTGCTAAGAAACCCAATTTCCATGATGAATTGCCCGAAGCCCCT,Distal Intergenic,9,100404495,100404759,265,1,Gm28267-201,-79136,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,29,29,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies1,
cg00522402,NA,NA,0.212992018,NA,NA,NA,Rsrc1,Rsrc1_Intron,3,67340967,67341016,67340967,67340968,50,+,CGGGGAAAAATCTCCTGCGAGACAAGGGTAAATTGAGCATTGAATTACAT,"Intron (Rsrc1-206/Rsrc1, intron 7 of 9)",3,66981390,67356559,375170,1,Rsrc1-206,359577,Rsrc1-206;Rsrc1-203;Rsrc1-202;Rsrc1-201;Rsrc1-209;Rsrc1-205,Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,37,66880,ENSMUSG00000034544,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg00549985,NA,-0.165099145,NA,NA,NA,NA,Cntfr,Cntfr_Intron,4,41684964,41685013,41684964,41684965,50,+,CGCTTTATCAGGAGACGCTTTTCTGACTTGGCAGCGTTGGGCGTTTTAAA,"Intron (Cntfr-203/Cntfr, intron 2 of 9)",4,41657498,41695442,37945,2,Cntfr-203,10429,Cntfr-203;Cntfr-204;Cntfr-201;Cntfr-202;Cntfr-205,Cntfr;Cntfr;Cntfr;Cntfr;Cntfr,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,9,12,12804,ENSMUSG00000028444,conserved gene and region,4,41684854,41685032,179,*,179,13,0.581005587,0.865699405,0.072625698,1.77E-08,CpGisland,TRUE,BivProm3,
cg00570985,NA,NA,0.441197177,NA,NA,NA,Plekha6,Plekha6_Exon,1,133294605,133294654,133294605,133294606,50,-,CGTGCCCCAGGACTCAGAGAGCCAGCTGCAGGAGCAGGAGAAGCGGATTG,"Exon (Plekha6-204/Plekha6, exon 21 of 23)",1,133181321,133301219,119899,1,Plekha6-204,113284,Plekha6-204;Plekha6-202;Plekha6-201;Plekha6-203;Plekha6-207;Plekha6-210;Plekha6-208,Plekha6;Plekha6;Plekha6;Plekha6;Plekha6;Plekha6;Plekha6,0;0;0;0;0;2855;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,7,240753,ENSMUSG00000041757,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh5,
cg00587168,0.023311728,NA,NA,NA,NA,NA,Dlx1,Dlx1_Intergenic_downstream,2,71538050,71538099,71538098,71538099,50,+,AAAAATTTTAAAGCAGCAGCAGTTACCATGCAATTCAGGCTAATTCTGCG,Distal Intergenic,2,71530780,71532689,1910,1,Dlx1-206,7270,Dlx1-201;Dlx1-203,Dlx1;Dlx1,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,9,36,13390,ENSMUSG00000041911,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg00597719,NA,0.516287307,NA,NA,NA,NA,Prox1,Prox1_Intron,1,190128881,190128930,190128929,190128930,50,+,ACATGCATCAGCTGTTGGGCTTTTGTTACGGGTATTGTAGAACTAATCCG,"Intron (Prox1-202/Prox1, intron 4 of 4)",1,190118035,190170714,52680,2,Prox1-202,41784,Prox1-202;Prox1-201;Prox1-203,Prox1;Prox1;Prox1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,18,59,19130,ENSMUSG00000010175,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhA2,
cg00618420,NA,NA,NA,NA,-0.139657697,NA,Zfp536,Zfp536_Exon,7,37772998,37773047,37773046,37773047,50,-,TATCTGGTAGGTGAAATGCATTGTACCATTAAAAACGCTCTCCATTGTCG,Promoter (<=1kb),7,37569629,37773641,204013,2,Zfp536-208,594,Zfp536-202;Zfp536-201;Zfp536-203;Zfp536-206;Zfp536-209;Zfp536-208;Zfp536-205;Zfp536-207;Zfp536-210,Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536,0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,13,112,243937,ENSMUSG00000043456,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg00638788,NA,NA,NA,0.082426944,NA,NA,Gbf1,Gbf1_Exon,19,46254597,46254646,46254645,46254646,50,+,GGTGCAGCTGCTCTTCACAAGGTAAACCTGCTGCTGTTTGCTTCAGCCCG,"Exon (Gbf1-201/Gbf1, exon 7 of 40)",19,46152509,46286510,134002,1,Gbf1-201,102088,Gbf1-201;Gbf1-204;Gbf1-214;Gbf1-213;Gbf1-210,Gbf1;Gbf1;Gbf1;Gbf1;Gbf1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,18,107338,ENSMUSG00000025224,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg00666549,NA,NA,-0.024058671,NA,NA,NA,Stac3,Stac3_Intergenic_downstream,10,127510332,127510381,127510332,127510333,50,+,CGGCAGCTGTCCCTAATTAGAGCGGCGGTTTAATTGGATTTATCAGCAGT,Distal Intergenic,10,127507225,127507992,768,1,Stac3-205,3107,Ndufa4l2-203;Ndufa4l2-202;Ndufa4l2-201;Stac3-202;Stac3-201;Stac3-204;Stac3-205,Ndufa4l2;Ndufa4l2;Ndufa4l2;Stac3;Stac3;Stac3;Stac3,-4586;-4586;0;0;0;5841;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,3,4,237611,ENSMUSG00000040287,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg00688252,NA,NA,NA,NA,-0.136137645,NA,Zfhx3,Zfhx3_Intron,8,108823041,108823090,108823089,108823090,50,+,TGTTGACATTTTAATGCGAATTATGTCATGTGGTATCCCCTTTGATTTCG,"Intron (Zfhx3-204/Zfhx3, intron 9 of 15)",8,107942644,108961630,1018987,1,Zfhx3-204,880397,Zfhx3-204;Zfhx3-201,Zfhx3;Zfhx3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,114,177,11906,ENSMUSG00000038872,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg00689651,NA,NA,NA,NA,0.094681666,NA,Lyl1,Lyl1_threeUTR,8,84704725,84704774,84704773,84704774,50,-,TCTTTATTTCTTTATTTCACATACACATTAGCCATTCAATGGAGAAGCCG,3' UTR,8,84701482,84704940,3459,1,Lyl1-204,3243,Lyl1-203;Lyl1-204;Lyl1-201;Lyl1-202;Nfix-207;Nfix-208;Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-206;Trmt1-201;Trmt1-203;Trmt1-204;Trmt1-211;Trmt1-205;Trmt1-210;Trmt1-218,Lyl1;Lyl1;Lyl1;Lyl1;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix;Trmt1;Trmt1;Trmt1;Trmt1;Trmt1;Trmt1;Trmt1,3276;0;3181;2944;0;0;0;0;0;0;0;15859;15478;15461;15442;15261;6327;5654,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,TRUE,FALSE,threeUTR,2,2,17095,ENSMUSG00000034041,mapped to different genes,,,,,,,,,,,,,TRUE,TSS2,
cg00704763,NA,NA,-0.022777722,NA,NA,NA,Bcor,Bcor_Intron,X,12085478,12085527,12085526,12085527,50,-,CTAATGCATAATGCACAGCGCCTGGAAGCCCGGCCATTAGCGGCCTGTCG,"Intron (Bcor-201/Bcor, intron 1 of 13)",20,12036743,12160355,123613,2,Bcor-201,74828,Bcor-202;Bcor-203;Bcor-204;Bcor-206;Bcor-201;Bcor-207;Bcor-205,Bcor;Bcor;Bcor;Bcor;Bcor;Bcor;Bcor,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,56,74,71458,ENSMUSG00000040363,conserved gene and region,X,12085326,12085682,357,*,357,18,0.546218487,0.675994109,0.050420168,5.80E-09,CpGisland,TRUE,BivProm3,
cg00740694,NA,NA,NA,NA,-1.239627022,NA,Fzd2,Fzd2_Exon,11,102604824,102604873,102604824,102604825,50,+,CGGGGAGAAGGGCATCTCCATCCCGGACCACGGCTTCTGCCAGCCCATCT,Promoter (<=1kb),11,102604396,102608058,3663,1,Fzd2-201,428,Fzd2-201,Fzd2,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,57265,ENSMUSG00000050288,conserved gene and region,11,102604502,102604897,396,*,396,47,0.762626263,0.816853193,0.118686869,8.59E-40,CpGisland,TRUE,PromF5,
cg00750099,NA,0.035223577,NA,NA,NA,NA,Pomc,Pomc_Exon,12,3960115,3960164,3960115,3960116,50,+,CGCGAGGGCAAGCGCTCCTACTCCATGGAGCACTTCCGCTGGGGCAAGCC,"Exon (Pomc-204/Pomc, exon 4 of 4)",12,3954951,3960573,5623,1,Pomc-204,5164,Efr3b-201;Efr3b-203;Pomc-204;Pomc-202;Pomc-201;Pomc-203;Pomc-205,Efr3b;Efr3b;Pomc;Pomc;Pomc;Pomc;Pomc,78751;32756;0;0;0;5146;5145,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,18976,ENSMUSG00000020660,conserved gene and region,12,3959827,3960450,624,*,624,52,0.637820513,0.822884967,0.083333333,2.11E-35,CpGisland,TRUE,,
cg00773632,NA,1.22433505,NA,NA,NA,NA,Ntm,Ntm_Intron,9,29939620,29939669,29939620,29939621,50,+,CGCCTATTAAAAAGCGGCCTTATTAATGGAATTGTACATCTAGGATTAAT,"Intron (Ntm-201/Ntm, intron 1 of 7)",9,28994750,29963129,968380,2,Ntm-201,23460,Ntm-201;Ntm-204;Ntm-210;Ntm-207;Ntm-209,Ntm;Ntm;Ntm;Ntm;Ntm,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,27,32,235106,ENSMUSG00000059974,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg00776597,NA,NA,NA,-0.092362926,NA,NA,Pcsk5,Pcsk5_threeUTR,19,17560416,17560465,17560416,17560417,50,-,CGTCAAATTTTGGCATCAAATGCTTTGGTCATACAATACTGTCTCTGTGG,3' UTR,19,17432319,17837632,405314,2,Pcsk5-201,277167,Pcsk5-201;Pcsk5-202;Pcsk5-204,Pcsk5;Pcsk5;Pcsk5,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,1,7,18552,ENSMUSG00000024713,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg00784834,NA,NA,NA,NA,0.203005994,NA,Gm9211,Gm9211_Intergenic_downstream,7,36329303,36329352,36329303,36329304,50,+,CGGAGTCTCTCAGCCCAACGAAGCTGCTGTGTCTTTGCCCCTGGATTTTA,Distal Intergenic,7,36234292,36235266,975,1,Gm9211-201,95011,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,12,15,668507,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies1,
cg00823476,NA,-0.569601468,NA,-0.777503921,NA,NA,Pdik1l,Pdik1l_fiveUTR,4,134284506,134284555,134284506,134284507,50,-,CGTACTTTGGCTGGCTACTCACCATCTTCAAGGTCGAGGTTTCTGGAAAA,5' UTR,4,134275002,134287239,12238,2,Pdik1l-203,2684,Pdik1l-203;Pdik1l-201;Pdik1l-202;Pdik1l-206;Pdik1l-204;Pdik1l-205,Pdik1l;Pdik1l;Pdik1l;Pdik1l;Pdik1l;Pdik1l,0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,8,230809,ENSMUSG00000050890,conserved gene but different region,4,134284376,134284541,166,*,166,11,0.493975904,1.129251701,0.06626506,7.69E-07,CpGisland,TRUE,TxEnh4,
cg00833227,NA,-0.011006499,NA,NA,NA,NA,Ahdc1,Ahdc1_Intron,4,133043070,133043119,133043070,133043071,50,+,CGGCAACAGTCCCCCCAGAACAGGCGGAGTGTGTGTCTGCCATTAGCGAC,"Intron (Ahdc1-210/Ahdc1, intron 2 of 3)",4,133011260,133060820,49561,1,Ahdc1-210,31810,Ahdc1-210;Ahdc1-203;Ahdc1-204;Ahdc1-205;Ahdc1-207;Ahdc1-211;Ahdc1-209;Ahdc1-206;Ahdc1-201;Ahdc1-202,Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,49,230793,ENSMUSG00000037692,conserved gene and region,4,133043047,133043197,151,*,151,12,0.635761589,0.795085564,0.079470199,2.68E-08,CpGisland,TRUE,EnhA1,
cg00855137,NA,NA,NA,NA,-0.393234655,NA,Rpl35a-ps4,Rpl35a-ps4_Intergenic_downstream,2,108827636,108827685,108827684,108827685,50,-,GGAGACAAATACCGCGGATGTGAAAGGTGTCGCTGGGATTACCAATGACG,Distal Intergenic,2,108874926,108875258,333,2,Rpl35a-ps4-201,47622,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,2,100043423,NA,mapped to different genes,,,,,,,,,,,,,TRUE,PromF5,
cg00863740,-0.031967735,NA,NA,NA,NA,NA,Cpeb2,Cpeb2_Exon,5,43233932,43233981,43233932,43233933,50,+,CGCAGGACTTCAGTAAGCGGCAGCAGCAGCAGCTGAGCAGCCAGAAGAGG,Promoter (<=1kb),5,43233170,43289723,56554,1,Cpeb2-204,762,Cpeb2-204;Cpeb2-201;Cpeb2-205;Cpeb2-206;Cpeb2-202;Cpeb2-207;Cpeb2-203,Cpeb2;Cpeb2;Cpeb2;Cpeb2;Cpeb2;Cpeb2;Cpeb2,0;0;0;0;0;-1069;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,11,231207,ENSMUSG00000039782,conserved gene and region,5,43233379,43233950,572,*,572,69,0.744755245,0.900109469,0.120629371,9.94E-59,CpGisland,TRUE,PromF4,
cg00893084,-0.013056231,NA,NA,NA,NA,NA,Lrp1,Lrp1_Exon,10,127553532,127553581,127553532,127553533,50,-,CGATCAGTGAATGGTCACCCCAGTCTGTCCAGTACAGGTACCTGGCGATG,"Exon (Lrp1-201/Lrp1, exon 60 of 89)",10,127538161,127621148,82988,2,Lrp1-201,67567,Lrp1-201;Lrp1-205,Lrp1;Lrp1,0;-3615,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,8,16971,ENSMUSG00000040249,conserved gene and region,10,127553362,127553533,172,*,172,15,0.604651163,0.954142012,0.087209302,7.29E-11,CpGisland,TRUE,TxEx3,
cg00910419,1.480099417,NA,NA,NA,2.770217262,0.151610595,Bcl11a,Bcl11a_fiveUTR,11,24078020,24078069,24078068,24078069,50,-,CCCATGTTTTGTGTGTCTCTGTCCATCCAGACTCCTGACGTTCAAGTTCG,Promoter (<=1kb),11,24078056,24173194,95139,1,Bcl11a-201,0,A830031A19Rik-201;Bcl11a-201;Bcl11a-203;Bcl11a-205;Bcl11a-202;Bcl11a-204,A830031A19Rik;Bcl11a;Bcl11a;Bcl11a;Bcl11a;Bcl11a,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,10,98,14025,ENSMUSG00000000861,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg01033486,-0.007251794,NA,NA,NA,NA,NA,Sox2,Sox2_Promoter,3,34640775,34640824,34640823,34640824,50,-,ATTTAGCCTTTAATCTCTTTTTATCCACGAAGACTAAAGCTCTGTACTCG,Promoter (9-10kb),3,34650405,34652461,2057,1,Sox2-201,-9630,NA,NA,NA,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,7,62,20674,ENSMUSG00000074637,mapped to different genes,3,34640800,34640945,146,*,146,19,0.671232877,1.163102725,0.130136986,3.83E-17,CpGisland,TRUE,,
cg01038105,NA,NA,NA,-0.169515582,NA,NA,Ctnnd1,Ctnnd1_fiveUTR,2,84622016,84622065,84622064,84622065,50,-,GTCCGTTGAGTTTCAAATCTGAAAATTTCTGTCTTTCAAGGTCAGCATCG,5' UTR,2,84600071,84650745,50675,2,Ctnnd1-204,28680,Ctnnd1-204;Ctnnd1-206;Ctnnd1-207;Ctnnd1-208;Ctnnd1-209;Ctnnd1-216;Ctnnd1-220;Ctnnd1-221;Ctnnd1-222;Ctnnd1-224;Ctnnd1-203;Ctnnd1-211;Ctnnd1-212;Ctnnd1-213;Ctnnd1-214;Ctnnd1-215;Ctnnd1-218;Ctnnd1-219;Ctnnd1-210;Ctnnd1-205;Ctnnd1-223;Ctnnd1-201;Ctnnd1-202;Ctnnd1-228;Ctnnd1-217;Ctnnd1-225;Ctnnd1-229;Gm28635-201,Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Gm28635,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,4,12388,ENSMUSG00000034101,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh6,
cg01053921,NA,NA,0.048539697,NA,NA,NA,Zfp362,Zfp362_Exon,4,128777385,128777434,128777433,128777434,50,+,GAGTGAAAGCCTTCTCGCAGCCAGGATGTGGGCACTTGTAGGGTCTGTCG,"Exon (Zfp362-202/Zfp362, exon 7 of 9)",4,128773088,128806045,32958,2,Zfp362-202,28611,Zfp362-202;Zfp362-201;Zfp362-204,Zfp362;Zfp362;Zfp362,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,7,230761,ENSMUSG00000028799,conserved gene and region,,,,,,,,,,,,,TRUE,Tx5,
cg01061575,1.22039828,NA,NA,NA,NA,NA,Prr5,Prr5_fiveUTR,15,84681195,84681244,84681195,84681196,50,+,CGCAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAG,5' UTR,15,84669620,84703673,34054,1,Prr5-202,11575,Prr5-202;Prr5-201,Prr5;Prr5,0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,2,109270,ENSMUSG00000036106,mapped to different genes,15,84680905,84681714,810,*,810,95,0.745679012,0.845279288,0.117283951,2.56E-79,CpGisland,TRUE,,
cg01090334,NA,NA,NA,NA,0.871737413,0.253526181,Cnksr2,Cnksr2_Exon,X,157919807,157919856,157919855,157919856,50,+,CTCTGAGGTCGCTTTTTCAAAGTTAAGATAACACCACTCGGGTCCTCTCG,"Exon (Cnksr2-201/Cnksr2, exon 9 of 22)",20,157821436,158043294,221859,2,Cnksr2-201,123438,Cnksr2-201;Cnksr2-202,Cnksr2;Cnksr2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,11,245684,ENSMUSG00000025658,conserved gene but different region,,,,,,,,,,,,,TRUE,Quies5,
cg01107103,NA,0.207160222,NA,NA,NA,NA,Gm12131,Gm12131_Intergenic_downstream,11,39228571,39228620,39228619,39228620,50,-,CAATAAATCAAAGACATCTGCTTGTCACCACCAGATGCTTGGCCACATCG,Distal Intergenic,11,39727070,39727712,643,2,Gm12131-201,499141,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,4,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg01149078,-0.145401635,NA,NA,NA,NA,NA,Sox14,Sox14_Intergenic_downstream,9,99869266,99869315,99869266,99869267,50,-,CGGAATTGCACCTTGGGCAGCGGAGCAGAATCCGGAATGTGAACTTCTCC,Distal Intergenic,9,99874220,99875655,1436,2,Sox14-202,6389,Sox14-201;Sox14-202,Sox14;Sox14,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,12,18,20669,ENSMUSG00000053747,mapped to different genes,9,99869255,99869839,585,*,585,42,0.608547009,0.785385501,0.071794872,5.36E-26,CpGisland,TRUE,BivProm2,
cg01153660,-1.085821657,NA,NA,NA,NA,NA,Hoxc5,Hoxc5_Intron,15,102998050,102998099,102998050,102998051,50,+,CGACCGCGGCGCCCATTTGCACACGCTACACAAATGCATCGCATTCCCGG,"Intron (Hoxc5-202/Hoxc5, intron 1 of 1)",15,102967443,103015676,48234,1,Hoxc5-202,30607,Hoxc5-202;Hoxc6-202;Hoxc6-203;Hoxc8-201;Hoxc8-202,Hoxc5;Hoxc6;Hoxc6;Hoxc8;Hoxc8,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,46,134,15424,ENSMUSG00000022485,conserved gene but different region,15,102997967,102998098,132,*,132,9,0.613636364,0.776470588,0.068181818,9.04E-06,CpGisland,TRUE,BivProm4,
cg01190601,NA,-0.097701802,NA,NA,NA,NA,Erbb4,Erbb4_Intron,1,69105039,69105088,69105087,69105088,50,-,CTGAACTCCAAGCGTGTCTAATAATGCGAGAAGCAGATTGTCTTCCCTCG,"Intron (Erbb4-201/Erbb4, intron 1 of 27)",1,68032186,69107756,1075571,2,Erbb4-201,2668,Erbb4-201;Erbb4-202;Erbb4-205,Erbb4;Erbb4;Erbb4,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,10,13,13869,ENSMUSG00000062209,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg01227361,NA,NA,NA,NA,-1.469344509,NA,Tenm4,Tenm4_Exon,7,96644125,96644174,96644125,96644126,50,+,CGGACTCAGACTCTGAGGAAGAGTTTGTCCCTAATTCATTCTTAGTTAAA,Promoter (<=1kb),7,96644172,96732280,88109,1,Tenm4-207,0,Tenm4-201;Tenm4-203;Tenm4-202;Tenm4-207,Tenm4;Tenm4;Tenm4;Tenm4,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,17,26,23966,ENSMUSG00000048078,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm4,
cg01245471,NA,NA,NA,NA,0.394266218,NA,Evx1,Evx1_Exon,6,52314194,52314243,52314194,52314195,50,-,CGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCACC,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,696,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,19,14028,ENSMUSG00000005503,mapped to different genes,6,52314189,52314303,115,*,115,10,0.617391304,0.93495935,0.086956522,2.42E-07,CpGisland,TRUE,BivProm2,
cg01284284,NA,NA,NA,NA,0.555114997,NA,Prdm16,Prdm16_Intron,4,154630625,154630674,154630673,154630674,50,-,TTGTAGTTAATGAAATTAAACACACCAATCGCATTTGTCCCCAGGGGACG,"Intron (Prdm16-201/Prdm16, intron 1 of 16)",4,154316125,154636866,320742,2,Prdm16-201,6192,Prdm16-201;Prdm16-202;Prdm16-203;Prdm16-204;Prdm16-205;Prdm16-206;Prdm16-210;Prdm16-207;Prdm16-212,Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,32,70673,ENSMUSG00000039410,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC9,
cg01290613,0.002422057,NA,NA,NA,NA,NA,Pou2f2,Pou2f2_Promoter,7,25179921,25179970,25179921,25179922,50,-,CGGCTCCCACCTTGTCCCCATGGCAACCCCGGGCCCAAGGATGCTCAGAG,Promoter (<=1kb),7,25120618,25179726,59109,2,Pou2f2-208,-244,Pou2f2-208,Pou2f2,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,11,29,18987,ENSMUSG00000008496,conserved gene but different region,7,25179573,25180057,485,*,485,61,0.771134021,0.853947179,0.125773196,3.02E-53,CpGisland,TRUE,BivProm1,
cg01309929,NA,0.056955259,NA,NA,NA,NA,Mink1,Mink1_Exon,11,70612726,70612775,70612726,70612727,50,-,CGGCTCAAGGTCATCTATGGCTCCAGTGCTGGCTTCCATGCTGTGGATGT,"Exon (Mink1-201/Mink1, exon 30 of 33)",11,70562881,70614482,51602,1,Mink1-201,49845,4930544D05Rik-204;4930544D05Rik-201;4930544D05Rik-202;4930544D05Rik-203;Chrne-202;Chrne-201;Chrne-204;Chrne-203;Mink1-201;Mink1-202;Mink1-205;Mink1-203;Mink1-204;Mink1-208;Mink1-212;Mink1-211;Mink1-209;Mink1-206,4930544D05Rik;4930544D05Rik;4930544D05Rik;4930544D05Rik;Chrne;Chrne;Chrne;Chrne;Mink1;Mink1;Mink1;Mink1;Mink1;Mink1;Mink1;Mink1;Mink1;Mink1,-3073;-3119;-3122;-3135;6419;6441;2898;2922;0;0;0;0;0;0;0;0;2988;2675,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,7,50932,ENSMUSG00000020827,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx3,
cg01337054,NA,NA,-0.025926518,NA,NA,NA,Zfp407,Zfp407_Intron,18,84372362,84372411,84372410,84372411,50,-,ATTAACGAGTGCCTTCTTTGAATTAGAAAAACTGTATCATTTAGCCCACG,"Intron (Zfp407-201/Zfp407, intron 2 of 2)",18,84128027,84558425,430399,2,Zfp407-201,186014,Zfp407-201;Zfp407-202;Zfp407-203,Zfp407;Zfp407;Zfp407,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,32,240476,ENSMUSG00000048410,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg01352789,NA,NA,NA,NA,-1.193701944,NA,Nol4,Nol4_Exon,18,23039969,23040018,23040017,23040018,50,-,GTCTTGCCTGAGTCCCCGTAAGTCCTGAGGCACCAGTCCTGGAACTGGCG,"Exon (Nol4-204/Nol4, exon 1 of 10)",18,22693634,23041653,348020,2,Nol4-204,1635,Nol4-202;Nol4-204;Nol4-208;Nol4-206;Nol4-209,Nol4;Nol4;Nol4;Nol4;Nol4,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,16,21,319211,ENSMUSG00000041923,conserved gene and region,18,23039723,23040174,452,*,452,35,0.595132743,0.893280632,0.077433628,6.56E-23,CpGisland,TRUE,BivProm1,
cg01359371,-0.304523367,NA,NA,NA,NA,NA,Kctd7,Kctd7_Exon,5,130151755,130151804,130151803,130151804,50,-,CATCGGGCCCCTCCTGGAGCAGCTGGAGAACATGCAGCCACTGAAGGGCG,"Exon (Kctd7-201/Kctd7, exon 3 of 4)",5,130144861,130155806,10946,1,Kctd7-201,6894,Kctd7-201;Kctd7-203;Kctd7-202,Kctd7;Kctd7;Kctd7,0;6831;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,Exon,2,2,212919,ENSMUSG00000034110,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg01385439,NA,-0.143621398,NA,NA,NA,NA,Irx3,Irx3_Exon,8,91872552,91872601,91872600,91872601,50,-,CTTTACCATTAATTTAACTTTCAGATGCTGAAATTGGTCACACAGCCTCG,"Exon (Gm28511-201/Gm28511-201, exon 2 of 2)",8,91798525,91802067,3543,2,Irx3-202,-70534,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,36,16373,ENSMUSG00000031734,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg01433318,NA,NA,0.05818632,NA,NA,NA,Tle4,Tle4_Intron,19,14566785,14566834,14566833,14566834,50,-,CACACACTTCTAATGGCCTATGTTTTGAAACTGAGTCTAATATAATGGCG,"Intron (Tle4-201/Tle4, intron 4 of 19)",19,14448150,14598051,149902,2,Tle4-201,31217,Tle4-201;Tle4-202;Tle4-203,Tle4;Tle4;Tle4,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,29,21888,ENSMUSG00000024642,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg01450059,NA,NA,-0.011961946,NA,NA,NA,Zfp521,Zfp521_Intron,18,13765184,13765233,13765184,13765185,50,+,CGTGGGAATTTAGCTAAAACTGTTAAAACTGACACCATTGGCTTTTGTTA,"Intron (Zfp521-201/Zfp521, intron 5 of 7)",18,13687013,13972787,285775,2,Zfp521-201,207554,Zfp521-201;Zfp521-205;Zfp521-204,Zfp521;Zfp521;Zfp521,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,65,81,225207,ENSMUSG00000024420,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg01513560,NA,0.115362436,NA,NA,NA,NA,Arhgap15,Arhgap15_Intron,2,44341443,44341492,44341491,44341492,50,+,TGTGACGGCTAGAACAGGGCCAGCTCTGGACGGCACATGTTCAAGTGACG,"Intron (Arhgap15-203/Arhgap15, intron 13 of 14)",2,43748824,44395953,647130,1,Arhgap15-203,592619,Arhgap15-203;Arhgap15-202;Arhgap15-201,Arhgap15;Arhgap15;Arhgap15,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,72,78,76117,ENSMUSG00000049744,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg01522553,NA,NA,0.319784017,NA,NA,NA,Kcnc4,Kcnc4_threeUTR,3,107439392,107439441,107439392,107439393,50,-,CGAGAGGGCGTCTTGGCAGGTCTCTGTGTTTAAAGAGCACAGGTGTGAGA,3' UTR,3,107438303,107459552,21250,2,Kcnc4-201,20111,Kcnc4-201;Kcnc4-202,Kcnc4;Kcnc4,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,3,12,99738,ENSMUSG00000027895,conserved gene and region,,,,,,,,,,,,,TRUE,znf1,
cg01537787,-0.012055369,NA,NA,NA,NA,NA,Onecut2,Onecut2_fiveUTR,18,64340362,64340411,64340362,64340363,50,+,CGGGCCCTGATGGACTGAATGAAGGCTGCCTACACCGCCTATCGATGCCT,Promoter (<=1kb),18,64340020,64400987,60968,1,Onecut2-201,342,Onecut2-201,Onecut2,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,19,225631,ENSMUSG00000045991,conserved gene and region,18,64339929,64340544,616,*,616,67,0.73538961,0.829721362,0.108766234,1.14E-53,CpGisland,TRUE,BivProm3,
cg01566077,-0.238227254,NA,NA,NA,NA,NA,Mettl3,Mettl3_threeUTR,14,52297591,52297640,52297639,52297640,50,+,TCAGCCATCACAACTGCAAACTTGCCCAAGATACTGACGTCCAGGTAGCG,3' UTR,14,52294841,52305128,10288,2,Mettl3-201,7488,Mettl3-201;Mettl3-212;Mettl3-209;Mettl3-213;Mettl3-210;Mettl3-206;Mettl3-204;Mettl3-207;Mettl3-203;Mettl3-202;Mettl3-211;Mettl3-208;Mettl3-214;Mettl3-205;Tox4-201,Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Mettl3;Tox4,0;0;-922;0;0;0;0;0;0;0;0;7347;7467;7459;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,3,56335,ENSMUSG00000022160,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg01574836,-0.239944711,NA,-0.081177315,NA,NA,NA,Malsu1,Malsu1_Exon,6,49075111,49075160,49075111,49075112,50,-,CGATATGATGGTTTCACTTCTGAGGCAAGAAAATGCAAGAGACATTTGTG,"Exon (Malsu1-203/Malsu1, exon 2 of 4)",6,49073795,49086751,12957,1,Malsu1-203,1316,Gm19253-201;Gpnmb-203;Malsu1-203;Malsu1-202;Malsu1-201;Malsu1-205,Gm19253;Gpnmb;Malsu1;Malsu1;Malsu1;Malsu1,3481;38434;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,75593,ENSMUSG00000029815,conserved gene and region,,,,,,,,,,,,,TRUE,PromF7,
cg01594275,0.612883788,NA,NA,NA,NA,NA,Ep300,Ep300_Intron,15,81633853,81633902,81633901,81633902,50,-,TGCATCATTGAATGTCCTTGTCGCCGTTGATGACCTGCTCTCTGCTCCCG,"Intron (Ep300-201/Ep300, intron 19 of 30)",15,81585397,81652077,66681,1,Ep300-201,48456,Ep300-201;Ep300-207;Ep300-204,Ep300;Ep300;Ep300,0;0;-2246,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,7,328572,ENSMUSG00000055024,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg01667686,0.097859942,NA,NA,NA,NA,NA,Ncor1,Ncor1_Exon,11,62333728,62333777,62333728,62333729,50,-,CGGGTGATGATCACGTCTATGAAGTTAGCTGCAGTAATGGTAGTCTTCCC,"Exon (Ncor1-204/Ncor1, exon 36 of 45)",11,62316426,62438515,122090,2,Ncor1-204,104738,Gm12276-201;Ncor1-204;Ncor1-201;Ncor1-213;Ncor1-214;Ncor1-202;Ncor1-205;Ncor1-209;Ncor1-223;Ncor1-219,Gm12276;Ncor1;Ncor1;Ncor1;Ncor1;Ncor1;Ncor1;Ncor1;Ncor1;Ncor1,2307;0;0;0;0;0;0;0;0;-2785,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,10,20185,ENSMUSG00000018501,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg01675972,-0.156909882,NA,NA,NA,NA,NA,Kpna1,Kpna1_threeUTR,16,36015922,36015971,36015922,36015923,50,-,CGGCAAAGTGGCCAGCAACAGAGTCCTGATCCAAATGGAGAAAGGGAACC,3' UTR,16,35983315,36037131,53817,1,Kpna1-201,32607,Kpna1-201;Kpna1-209;Kpna1-205;Kpna1-207;Kpna1-210;Kpna1-202;Kpna1-206,Kpna1;Kpna1;Kpna1;Kpna1;Kpna1;Kpna1;Kpna1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,5,16646,ENSMUSG00000022905,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg01689963,NA,NA,NA,NA,0.511924531,NA,Sox21,Sox21_Exon,14,118212479,118212528,118212479,118212480,50,+,CGCTTGGACTTTATCCTGGTGGTAATGAAGAGATAATGAAGATTTTTAAT,"Exon (4933431J24Rik-201/4933431J24Rik-201, exon 1 of 2)",14,118233232,118237030,3799,2,Sox21-201,24502,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,27,223227,ENSMUSG00000061517,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC3,LINE
cg01703108,NA,NA,NA,NA,0.743633577,0.443840041,Epha3,Epha3_Exon,16,63653410,63653459,63653458,63653459,50,-,CAAAACTACTCACGGGTACAAGCCATGGATGGAGGGTCTTTGTCTGCCCG,"Exon (Epha3-201/Epha3, exon 4 of 17)",16,63543534,63864158,320625,2,Epha3-201,210699,Epha3-201;Epha3-203;Epha3-206;Epha3-205,Epha3;Epha3;Epha3;Epha3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,8,13837,ENSMUSG00000052504,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg01710150,NA,NA,-0.069954849,NA,NA,NA,Nrp2,Nrp2_Intron,1,62704529,62704578,62704529,62704530,50,+,CGGTGTTCATATGTCACATATGGACTGAATCAAAGGTTTAAAAATACTAC,"Intron (Nrp2-207/Nrp2, intron 1 of 2)",1,62703285,62739932,36648,1,Nrp2-207,1244,Nrp2-207;Nrp2-203;Nrp2-204;Nrp2-201;Nrp2-205;Nrp2-202;Nrp2-206,Nrp2;Nrp2;Nrp2;Nrp2;Nrp2;Nrp2;Nrp2,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,6,18187,ENSMUSG00000025969,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg01712842,NA,NA,0.350402357,NA,0.862863209,NA,Neurog2,Neurog2_Promoter,3,127625765,127625814,127625813,127625814,50,-,TAGAACTCAACAGGAGTAAAACTAAATCCTCGTTTAAGTGTATTTATCCG,Promoter (7-8kb),3,127633135,127635631,2497,1,Neurog2-201,-7370,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,14,11924,ENSMUSG00000027967,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg01727347,NA,NA,NA,-0.28462984,NA,NA,Cdk12,Cdk12_Intergenic_downstream,11,98290098,98290147,98290146,98290147,50,+,GAGGCGTTCCTGCCAAATCCATCCCAACATCTTGGCCTGGCATCAGGGCG,Distal Intergenic,11,98263502,98268011,4510,1,Cdk12-204,26596,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,17,25,69131,ENSMUSG00000003119,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh5,
cg01739251,0.071594575,NA,NA,NA,NA,NA,Tal1,Tal1_Promoter,4,115056612,115056661,115056660,115056661,50,+,TGCCAAATTAAAATGAATCATTTGGCCCATAATGGCCGAGGCGCTTATCG,Promoter (<=1kb),4,115056426,115071755,15330,1,Tal1-201,186,Tal1-201;Tal1-202;Tal1-203;Tal1-204,Tal1;Tal1;Tal1;Tal1,0;0;-1150;-2847,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,4,21349,ENSMUSG00000028717,conserved gene and region,4,115056648,115057443,796,*,796,76,0.639447236,0.935920047,0.095477387,4.01E-56,CpGisland,TRUE,,
cg01751209,NA,NA,NA,NA,-0.101982263,NA,Ap3b1,Ap3b1_Intergenic_downstream,13,94576082,94576131,94576082,94576083,50,+,CGGCAGCCGGTCCCATTGTTTGCCCTTGATGAGCATGTCATTAATGGAAA,Distal Intergenic,13,94542303,94547867,5565,1,Ap3b1-202,33779,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,33,55,11774,ENSMUSG00000021686,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk2,
cg01766000,NA,NA,NA,NA,0.994131718,NA,Tfap2a,Tfap2a_Intergenic_downstream,13,40709134,40709183,40709182,40709183,50,+,ATCCATGGACACTCGAGCAATTATGCCTCCACGCTGAAGGTGGATTAGCG,Distal Intergenic,13,40716724,40728944,12221,2,Tfap2a-209,19761,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,15,57,21418,ENSMUSG00000021359,mapped to different genes,13,40709088,40709361,274,*,274,22,0.653284672,0.763037975,0.080291971,5.99E-15,CpGisland,TRUE,"BivProm2,ReprPC1",
cg01831882,NA,NA,NA,NA,-1.09739692,NA,Foxg1,Foxg1_Exon,12,49385346,49385395,49385346,49385347,50,+,CGGCCTCACCTTCATGGACCGCGCCGGCTCCCTCTACTGGCCCATGTCGC,"Exon (Foxg1-204/Foxg1, exon 1 of 1)",12,49382883,49386855,3973,1,Foxg1-204,2463,Foxg1-202;Foxg1-203;Foxg1-204;Foxg1-201;Gm43517-201,Foxg1;Foxg1;Foxg1;Foxg1;Gm43517,0;2546;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,27,15228,ENSMUSG00000020950,conserved gene and region,12,49385116,49385808,693,*,693,72,0.670995671,0.980968858,0.103896104,4.68E-56,CpGisland,TRUE,BivProm2,
cg01851187,-0.536825631,NA,NA,NA,-2.094237207,-1.010792527,Mitf,Mitf_Intergenic_downstream,6,98106261,98106310,98106309,98106310,50,+,AAAAGAGGTCACTGGTCTTTCCTTTAATTTCTGTCACAGGCTGCAGGCCG,Distal Intergenic,6,97991921,98018175,26255,1,Mitf-208,114340,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,16,17342,ENSMUSG00000035158,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk4,
cg01852109,NA,NA,NA,NA,-0.254414817,NA,Igdcc4,Igdcc4_Exon,9,65124671,65124720,65124671,65124672,50,-,CGGGACCTGGAACCCAACACAGATTATGAGTTCTACGTGGTGGCCTACTC,"Exon (Igdcc4-201/Igdcc4, exon 8 of 20)",9,65101486,65137940,36455,1,Igdcc4-201,23185,Igdcc4-201;Igdcc4-202;Igdcc4-205;Igdcc4-204;Igdcc4-206;Igdcc4-203,Igdcc4;Igdcc4;Igdcc4;Igdcc4;Igdcc4;Igdcc4,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,56741,ENSMUSG00000032816,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg01902998,-0.100121683,NA,NA,NA,NA,NA,Sptb,Sptb_fiveUTR,12,76710049,76710098,76710049,76710050,50,-,CGCGGACCCGCCCAGAGATATAAATAACATTATCTGAGGAGGGACATTCC,Promoter (<=1kb),12,76580488,76710547,130060,2,Sptb-201,449,Sptb-201;Sptb-202,Sptb;Sptb,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,6,20741,ENSMUSG00000021061,conserved gene but different region,12,76709477,76710058,582,*,582,58,0.743986254,0.728756477,0.099656357,3.86E-44,CpGisland,TRUE,TSS2,
cg01932632,-0.476704466,NA,NA,NA,NA,NA,Spire1,Spire1_Exon,18,67610574,67610623,67610574,67610575,50,+,CGCCTGCTCCTCGTTGATGGGCTGGTTGTACAGCCGCAGGATCTCCTCCA,Promoter (<=1kb),18,67488209,67610790,122582,2,Spire1-203,167,Spire1-203,Spire1,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,68166,ENSMUSG00000024533,conserved gene and region,18,67610213,67611300,1088,*,1088,156,0.752757353,1.0137978,0.143382353,8.84E-146,CpGisland,TRUE,,
cg01933636,NA,NA,NA,0.782111717,NA,NA,Fbxw4,Fbxw4_Intron,19,45628832,45628881,45628880,45628881,50,-,GGTTAGCCGACACCTCTGCTCTGTGGAATTTTAATTAACTTCTCTCATCG,"Intron (Fbxw4-206/Fbxw4, intron 1 of 4)",19,45578254,45631138,52885,2,Fbxw4-206,2257,Fbxw4-206;Fbxw4-201;Fbxw4-208;Fbxw4-202,Fbxw4;Fbxw4;Fbxw4;Fbxw4,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,14,30838,ENSMUSG00000040913,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg01975510,0.286087436,NA,NA,NA,NA,NA,Kdm2a,Kdm2a_Exon,19,4324733,4324782,4324781,4324782,50,-,TCAACTTCAGACAGCTCCTTTTTGCCGCTGGGATTGTTCTCCTTTTCCCG,"Exon (Kdm2a-201/Kdm2a, exon 17 of 21)",19,4314419,4398285,83867,2,Kdm2a-201,73503,Kdm2a-201;Kdm2a-202;Kdm2a-213;Kdm2a-211;Kdm2a-207;Kdm2a-214;Kdm2a-212;Kdm2a-210,Kdm2a;Kdm2a;Kdm2a;Kdm2a;Kdm2a;Kdm2a;Kdm2a;Kdm2a,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,21,30,225876,ENSMUSG00000054611,conserved gene and region,19,4324711,4324995,285,*,285,19,0.621052632,0.696373457,0.066666667,1.66E-11,CpGisland,TRUE,TxEx2,
cg01986981,NA,NA,NA,0.313587347,NA,NA,Antxr2,Antxr2_Intron,5,97935178,97935227,97935226,97935227,50,-,CCTGCTGTCCCCTGTCACTCCCTGGAAACTTGGCGGCAGATGTTGCAGCG,"Intron (Antxr2-201/Antxr2, intron 16 of 16)",5,97882783,98030962,148180,2,Antxr2-201,95735,Antxr2-201;Antxr2-202,Antxr2;Antxr2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,71914,ENSMUSG00000029338,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA19,
cg02040024,0.365397294,NA,NA,0.106572901,NA,NA,Egr3,Egr3_Exon,14,70078960,70079009,70079008,70079009,50,+,CTTCCAGCCAGCCCCCGGCAACAAGACCGTGACCTACTTGGGAAAGTTCG,"Exon (Egr3-201/Egr3, exon 3 of 3)",14,70077203,70079955,2753,1,Egr3-201,1757,Egr3-201;Egr3-204;Egr3-203;Egr3-202,Egr3;Egr3;Egr3;Egr3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,19,13655,ENSMUSG00000033730,conserved gene but different region,14,70078306,70079015,710,*,710,70,0.654929577,0.919416901,0.098591549,8.62E-53,CpGisland,TRUE,BivProm1,
cg02077300,NA,NA,NA,NA,NA,0.663496401,Gm2505,Gm2505_Intergenic_upstream,3,143655405,143655454,143655453,143655454,50,-,GGCAGGAATTCTACAATCACTTATTAAATTGGCCTCCTAAATCCTGAGCG,Distal Intergenic,3,143872995,143873819,825,1,Gm2505-201,-217590,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,11,37,100039938,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies3,
cg02129856,NA,NA,NA,NA,0.157544922,NA,Gbx2,Gbx2_Intergenic_upstream,1,89941544,89941593,89941592,89941593,50,+,GAATTTAATTGCCGAGCCATTAGACAAATAGTATATTTGCCATTCCCGCG,Distal Intergenic,1,89927956,89931179,3224,2,Gbx2-201,-10365,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,4,13,14472,ENSMUSG00000034486,conserved gene but different region,1,89941556,89941680,125,*,125,14,0.576,1.489361702,0.112,1.05E-11,CpGisland,TRUE,BivProm2,
cg02169296,NA,NA,-0.338091773,NA,NA,NA,Tspan5,Tspan5_fiveUTR,3,138742551,138742600,138742551,138742552,50,-,CGGGGCAAGTGTCTTCATGAACCCAGAGGATGTCCGGGAAGCACTACAAG,Promoter (<=1kb),3,138742195,138907905,165711,1,Tspan5-201,356,Tspan5-201;Tspan5-207;Tspan5-204;Tspan5-209,Tspan5;Tspan5;Tspan5;Tspan5,0;0;0;-169,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,2,56224,ENSMUSG00000028152,conserved gene and region,3,138741870,138742586,717,*,717,97,0.744769874,0.979108302,0.135285914,6.12E-88,CpGisland,TRUE,,
cg02188840,NA,NA,NA,NA,-1.550671856,NA,Tnrc6c,Tnrc6c_Exon,11,117736003,117736052,117736051,117736052,50,+,CCTGGATCATGAGCCGGCTGATCAAACAACTCACAGACATGGGCTTCCCG,"Exon (Tnrc6c-201/Tnrc6c, exon 8 of 22)",11,117654289,117763437,109149,1,Tnrc6c-201,81714,Tnrc6c-201;Tnrc6c-205;Tnrc6c-202;Tnrc6c-203,Tnrc6c;Tnrc6c;Tnrc6c;Tnrc6c,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,217351,ENSMUSG00000025571,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg02190183,-0.00215638,NA,NA,NA,NA,NA,Zfhx3,Zfhx3_fiveUTR,8,108714824,108714873,108714872,108714873,50,-,TTAACCTTCCGCTTTGTTGCTGTGTAATGTGGATCCCCGAAGGCCCCCCG,5' UTR,8,107942644,108961630,1018987,1,Zfhx3-204,772180,Zfhx3-204;Zfhx3-202;Zfhx3-201,Zfhx3;Zfhx3;Zfhx3,0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,11,177,11906,ENSMUSG00000038872,conserved gene but different region,8,108714612,108715434,823,*,823,88,0.725394897,0.812839506,0.106925881,1.42E-69,CpGisland,TRUE,TSS2,Low_complexity
cg02205352,NA,NA,-0.88967758,NA,NA,NA,Pura,Pura_Exon,18,36287815,36287864,36287815,36287816,50,+,CGAGGGCACCTCCTTGACTGTGGACAACAAGCGCTTCTTCTTCGATGTGG,"Exon (Pura-201/Pura, exon 2 of 2)",18,36281097,36292535,11439,1,Pura-201,6718,Pura-201,Pura,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,13,19,19290,ENSMUSG00000043991,conserved gene and region,18,36286687,36288029,1343,*,1343,129,0.68652271,0.823041768,0.096053611,4.14E-95,CpGisland,TRUE,PromF3,
cg02216125,2.85413722,NA,NA,NA,NA,NA,Eif4g2,Eif4g2_Exon,7,111077259,111077308,111077307,111077308,50,+,TTTGGTCCATTGTCAAGAAAAGCCTTGCGAGGAACCCAATGGTGTTCTCG,"Exon (Eif4g2-213/Eif4g2, exon 11 of 22)",7,111067750,111083030,15281,2,Eif4g2-213,5722,Eif4g2-213;Eif4g2-206;Eif4g2-207;Eif4g2-208;Eif4g2-214;Eif4g2-202;Eif4g2-204;Eif4g2-211;Eif4g2-210;Eif4g2-209;Eif4g2-203;Eif4g2-201;Eif4g2-212;Eif4g2-205,Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2,0;0;0;0;-3010;-2560;-1874;-1050;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,20,22,13690,ENSMUSG00000005610,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg02282892,NA,NA,0.009553264,NA,NA,NA,C1qtnf3,C1qtnf3_Exon,15,10952659,10952708,10952707,10952708,50,+,ATAATAACACTTCTACAGACCTAAAATCCCTGAGACCAGATGAGCTACCG,Promoter (<=1kb),15,10952332,10980150,27819,1,C1qtnf3-201,327,C1qtnf3-201;C1qtnf3-202,C1qtnf3;C1qtnf3,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,81799,ENSMUSG00000058914,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg02285637,NA,NA,NA,NA,-0.151166705,NA,Lyl1,Lyl1_threeUTR,8,84704907,84704956,84704955,84704956,50,-,AAACAGACAGTAAACTACCCTTGTTTCTTATGTATCTCAGTGCAGAGACG,3' UTR,8,84701482,84704940,3459,1,Lyl1-204,3425,Lyl1-203;Lyl1-204;Lyl1-201;Lyl1-202;Nfix-207;Nfix-208;Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-206,Lyl1;Lyl1;Lyl1;Lyl1;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix,3458;0;3363;3126;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,TRUE,FALSE,threeUTR,2,2,17095,ENSMUSG00000034041,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg02339457,NA,-0.157693089,NA,NA,NA,NA,Dmrt1,Dmrt1_Intron,19,25602205,25602254,25602253,25602254,50,-,CATTAGTATTAACGATTGGCCATTTGGAATTGGTGACAAACTACTGCCCG,"Intron (Dmrt1-201/Dmrt1, intron 4 of 4)",19,25505618,25604329,98712,1,Dmrt1-201,96587,Dmrt1-201;Dmrt1-202,Dmrt1;Dmrt1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,9,9,50796,ENSMUSG00000024837,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg02486904,NA,NA,NA,NA,-0.655495636,NA,Gm12830,Gm12830_Exon,4,114821860,114821909,114821908,114821909,50,+,AGAAAGTAAAAACACAGCTGACTCCCATTAGGGCCCTCTCACAGGCTCCG,Promoter (<=1kb),4,114821722,114856166,34445,1,Gm12830-201,138,Gm12830-201,Gm12830,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,26,433746,ENSMUSG00000055198,mapped to different genes,4,114821908,114822167,260,*,260,26,0.676923077,0.936936937,0.1,4.14E-20,CpGisland,TRUE,PromF5,
cg02533268,NA,NA,NA,NA,-1.435646763,NA,Foxg1,Foxg1_Exon,12,49385330,49385379,49385330,49385331,50,+,CGCGCCTCACCTCCACCGGCCTCACCTTCATGGACCGCGCCGGCTCCCTC,"Exon (Foxg1-204/Foxg1, exon 1 of 1)",12,49382883,49386855,3973,1,Foxg1-204,2447,Foxg1-202;Foxg1-203;Foxg1-204;Foxg1-201;Gm43517-201,Foxg1;Foxg1;Foxg1;Foxg1;Gm43517,0;2530;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,27,15228,ENSMUSG00000020950,conserved gene and region,12,49385116,49385808,693,*,693,72,0.670995671,0.980968858,0.103896104,4.68E-56,CpGisland,TRUE,BivProm2,
cg02546724,NA,NA,NA,NA,0.378942739,NA,Gbx2,Gbx2_Intergenic_upstream,1,89941560,89941609,89941608,89941609,50,+,CCATTAGACAAATAGTATATTTGCCATTCCCGCGTTATCCATCATTTTCG,Distal Intergenic,1,89927956,89931179,3224,2,Gbx2-201,-10381,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,4,13,14472,ENSMUSG00000034486,conserved gene but different region,1,89941556,89941680,125,*,125,14,0.576,1.489361702,0.112,1.05E-11,CpGisland,TRUE,BivProm2,
cg02572855,0.007809233,NA,NA,NA,NA,NA,Gm44533,Gm44533_Intergenic_downstream,7,69336431,69336480,69336479,69336480,50,-,AGATAAATAGCAGAGTGTCCTCCTCAAAAATATGATTAATACCCTACTCG,Distal Intergenic,7,69259595,69259862,268,1,Gm44533-201,76885,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,2,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,HET1,
cg02601407,NA,NA,NA,NA,-1.864409556,NA,Rev3l,Rev3l_fiveUTR,10,39732129,39732178,39732177,39732178,50,+,CATGGCAACAAGAGCTGCAGCCTGGGACCGAGGAGCCCGTGTGATTCCCG,Promoter (<=1kb),10,39732118,39875211,143094,1,Rev3l-201,11,Rev3l-201;Rev3l-204;Rev3l-207,Rev3l;Rev3l;Rev3l,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,7,19714,ENSMUSG00000019841,conserved gene and region,10,39732157,39733134,978,*,978,126,0.715746421,1.007554945,0.128834356,6.64E-111,CpGisland,TRUE,PromF4,Simple_repeat
cg02604675,NA,-0.563887102,NA,NA,NA,NA,Helt,Helt_Promoter,8,46295363,46295412,46295363,46295364,50,-,CGGTAAATGTCATTAGAAAGGGAGAAACAATCGCGCTTAGAGGGCTCTGA,Promoter (<=1kb),8,46292039,46294671,2633,2,Helt-201,-741,Helt-201;Helt-202;Helt-203,Helt;Helt;Helt,0;-1374;-2028,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,15,22,234219,ENSMUSG00000047171,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg02615877,NA,NA,NA,NA,-1.062936007,-1.068736732,Msantd2,Msantd2_Promoter,9,37489995,37490044,37490043,37490044,50,+,TTTCCCAGATGGCCGCCAGCCCGTAGGTTTCCTGAGTTTGAAGTTGGGCG,Promoter (<=1kb),9,37489021,37524150,35130,1,Msantd2-209,974,Msantd2-209;Msantd2-204;Msantd2-210;Msantd2-201;Msantd2-202;Msantd2-208;Msantd2-205;Msantd2-203;Msantd2-206,Msantd2;Msantd2;Msantd2;Msantd2;Msantd2;Msantd2;Msantd2;Msantd2;Msantd2,0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,2,8,235184,ENSMUSG00000042138,conserved gene but different region,9,37489051,37490155,1105,*,1105,120,0.717647059,0.844575228,0.108597285,1.63E-95,CpGisland,TRUE,,
cg02622074,2.377308604,NA,NA,NA,NA,NA,Tfap2a,Tfap2a_Intron,13,40730615,40730664,40730615,40730616,50,-,CGCGCTGGGCAGCGTTCCTGGAGCCTCCTAATAGCAGATATTCATGACTA,"Intron (Gm26688-201/Gm26688-201, intron 1 of 2)",13,40715675,40733823,18149,2,Tfap2a-202,3159,Tfap2a-201;Tfap2a-202;Tfap2a-205;Tfap2a-203;Tfap2a-209;Tfap2a-208;Tfap2a-206;Tfap2a-204;Tfap2a-207,Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,57,21418,ENSMUSG00000021359,mapped to different genes,13,40730503,40730628,126,*,126,13,0.571428571,1.267801858,0.103174603,2.07E-10,CpGisland,TRUE,PromF5,
cg02683277,NA,NA,NA,NA,0.49262638,NA,Fgfr2,Fgfr2_Intron,7,131542589,131542638,131542637,131542638,50,+,CGCATTTAACTTGGATGACATTTTGATTTCATCATTAGCATCCGGCGCCG,"Intron (Fgfr2-217/Fgfr2, intron 2 of 6)",7,130162451,133123350,2960900,2,Fgfr2-217,1580712,Fgfr2-217;Hmx3-201,Fgfr2;Hmx3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,58,79,14183,ENSMUSG00000030849,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg02692845,-0.038291715,NA,NA,NA,NA,NA,Sox2,Sox2_Exon,3,34651059,34651108,34651059,34651060,50,-,CGCAGACCTACATGAACGGCTCGCCCACCTACAGCATGTCCTACTCGCAG,Promoter (<=1kb),3,34650405,34652461,2057,1,Sox2-201,654,Sox2-201,Sox2,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,10,62,20674,ENSMUSG00000074637,mapped to different genes,3,34650151,34651388,1238,*,1238,126,0.673667205,0.899335824,0.10177706,2.40E-96,CpGisland,TRUE,,
cg02715589,NA,NA,0.014662275,NA,NA,NA,Wnt2b,Wnt2b_Intergenic_downstream,3,104943514,104943563,104943562,104943563,50,-,TGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCG,Distal Intergenic,3,104960414,104961721,1308,2,Wnt2b-202,18207,Wnt2b-201,Wnt2b,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,4,22414,ENSMUSG00000027840,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg02753151,0.475197658,NA,1.140181896,NA,NA,NA,Slc44a2,Slc44a2_Exon,9,21353023,21353072,21353023,21353024,50,+,CGGCTCTCAGGAGCGACCCTACTTCATGTCGCCCGAGCTGAGAGACATCC,"Exon (Slc44a2-205/Slc44a2, exon 6 of 7)",9,21320698,21355028,34331,1,Slc44a2-210,32325,Slc44a2-210;Slc44a2-207;Slc44a2-201;Slc44a2-202;Slc44a2-209;Slc44a2-205;Slc44a2-203,Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2,0;0;0;8141;6039;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,68682,ENSMUSG00000057193,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg02758132,NA,0.540153863,NA,NA,NA,NA,Jag2,Jag2_Exon,12,112929028,112929077,112929028,112929029,50,-,CGTAGCTGCAGGGCCCCGTGGGCGTCACCTTGGCCTGGTACTCCTTAAGG,Promoter (<=1kb),12,112907819,112929776,21958,2,Jag2-201,699,Jag2-201;Jag2-208,Jag2;Jag2,0;-580,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,16450,ENSMUSG00000002799,conserved gene and region,12,112928401,112929996,1596,*,1596,249,0.778822055,1.031328828,0.156015038,1.55E-243,CpGisland,TRUE,BivProm1,
cg02766229,NA,0.082905528,NA,NA,NA,NA,Casz1,Casz1_Intron,4,148908433,148908482,148908481,148908482,50,+,CAGGGTGACCTGTTTAATCATCTCATTTTCTGGTGGCCGTTTATTCCTCG,"Intron (Casz1-201/Casz1, intron 4 of 15)",4,148804429,148945129,140701,1,Casz1-201,104004,Casz1-201;Casz1-202;Casz1-206,Casz1;Casz1;Casz1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,PromF1,
cg02766818,0.18766594,0.735481183,NA,NA,NA,NA,A830031A19Rik,A830031A19Rik_Exon,11,24076516,24076565,24076564,24076565,50,+,GTAAAACTGAAAGTATCCCACGCCAGAGTGAAGCCCGCTTTTTGACAGCG,Promoter (1-2kb),11,24048955,24075054,26100,2,A830031A19Rik-201,-1462,A830031A19Rik-201;Bcl11a-201;Bcl11a-203;Bcl11a-205;Bcl11a-202;Bcl11a-204,A830031A19Rik;Bcl11a;Bcl11a;Bcl11a;Bcl11a;Bcl11a,0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,23,268391,NA,mapped to different genes,11,24076381,24076583,203,*,203,22,0.630541872,1.145128205,0.108374384,6.83E-18,CpGisland,TRUE,PromF5,
cg02785457,NA,0.056713405,NA,NA,NA,NA,Tank,Tank_Intergenic_downstream,2,61656449,61656498,61656497,61656498,50,+,TAATTATCCGTCTCATTTGAGAAGAGCAGCATTTGAGGCAGCAGCGTTCG,Distal Intergenic,2,61643831,61649977,6147,1,Tank-211,12618,Tank-205;Tank-201;Tank-206;Tank-203;Tank-204;Tank-202;Tank-208,Tank;Tank;Tank;Tank;Tank;Tank;Tank,0;0;0;0;0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,16,17,21353,ENSMUSG00000064289,mapped to different genes,2,61656429,61656917,489,*,489,60,0.707566462,0.985887097,0.122699387,1.21E-51,CpGisland,TRUE,PromF5,
cg02793066,-0.162308264,NA,NA,NA,NA,NA,Vps11,Vps11_threeUTR,9,44356215,44356264,44356263,44356264,50,-,CTGGTGGCCTTGCCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAGTGCG,3' UTR,9,44347749,44361670,13922,2,Vps11-201,5406,Vps11-201;Vps11-205;Vps11-206;Vps11-202;Vps11-203;Vps11-204,Vps11;Vps11;Vps11;Vps11;Vps11;Vps11,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,2,71732,ENSMUSG00000032127,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg02800363,-1.086183574,NA,NA,NA,NA,NA,Ahdc1,Ahdc1_Intron,4,133052204,133052253,133052252,133052253,50,+,GAACAAGGAGGCCAGAGCAGCTAATGGGAAACATGTGATTCTGCCTTGCG,"Intron (Ahdc1-210/Ahdc1, intron 2 of 3)",4,133011260,133060820,49561,1,Ahdc1-210,40944,Ahdc1-210;Ahdc1-203;Ahdc1-204;Ahdc1-205;Ahdc1-207;Ahdc1-211;Ahdc1-209;Ahdc1-206;Ahdc1-201;Ahdc1-202,Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,49,230793,ENSMUSG00000037692,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA1,
cg02808901,NA,NA,NA,NA,-0.945838207,NA,Hoxa11,Hoxa11_Exon,6,52246008,52246057,52246008,52246009,50,-,CGTCACTCGGTGTTCTCACCGAAAGCACGTAATCGCCGGTGTAACTCATG,Promoter (<=1kb),6,52242106,52245810,3705,2,Hoxa11-201,-247,Hoxa11-201;Hoxa11-202,Hoxa11;Hoxa11,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,18,15396,ENSMUSG00000038210,mapped to different genes,6,52246008,52246200,193,*,193,16,0.658031088,0.771614193,0.082901554,3.24E-11,CpGisland,TRUE,BivProm1,
cg02815776,NA,NA,-0.472962962,NA,NA,NA,Tspan9,Tspan9_Exon,6,128034421,128034470,128034421,128034422,50,-,CGGCTTGGCAAAGTCCGAGTCCTTGCTGTCCAAAGATGGACTCCGATGGA,"Exon (Tspan9-204/Tspan9, exon 1 of 5)",6,127961396,128143563,182168,2,Tspan9-203,109093,Tspan9-203;Tspan9-202;Tspan9-201;Tspan9-204;Tspan9-211;Tspan9-209;Tspan9-208;Tspan9-207;Tspan9-206,Tspan9;Tspan9;Tspan9;Tspan9;Tspan9;Tspan9;Tspan9;Tspan9;Tspan9,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,8,109246,ENSMUSG00000030352,conserved gene and region,6,128034330,128034771,442,*,442,46,0.692307692,0.869148891,0.104072398,4.63E-36,CpGisland,TRUE,BivProm1,
cg02818198,NA,NA,-0.37510097,NA,NA,NA,Dpf1,Dpf1_Exon,7,29309676,29309725,29309676,29309677,50,-,CGCCCGCTGTTGGAGGAAGAAACGGAGACTCAACATCCTGGAGGACCCCA,"Exon (Dpf1-204/Dpf1, exon 3 of 12)",7,29303951,29317264,13314,1,Dpf1-204,5725,Dpf1-204;Dpf1-201;Dpf1-203;Dpf1-208;Dpf1-202;Dpf1-210;Dpf1-207;Dpf1-205;Dpf1-209;Dpf1-206,Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,4,29861,ENSMUSG00000030584,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg02873280,NA,NA,NA,NA,0.14436174,NA,Otp,Otp_Promoter,13,94872436,94872485,94872484,94872485,50,+,GTGATTTCTGAAGACATTCTTGTCATTCCGAAGATTTGGGGGCCATTGCG,Promoter (3-4kb),13,94875602,94885130,9529,1,Otp-201,-3117,Otp-201,Otp,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg02925207,0.120491132,NA,NA,NA,NA,NA,Sorbs2,Sorbs2_Exon,8,45783549,45783598,45783549,45783550,50,-,CGCATAAATCCAGATGACATAGATTTAGAAAATGAGCCCTGGTATAAATT,"Exon (Sorbs2-201/Sorbs2, exon 14 of 26)",8,45507788,45827906,320119,1,Sorbs2-201,275761,Sorbs2-201;Sorbs2-218;Sorbs2-209;Sorbs2-202;Sorbs2-231;Sorbs2-215;Sorbs2-228;Sorbs2-220;Sorbs2-234;Sorbs2-207;Sorbs2-204;Sorbs2-211;Sorbs2-221;Sorbs2-229;Sorbs2-225;Sorbs2-236,Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2;Sorbs2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-1144,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,4,234214,ENSMUSG00000031626,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC3,
cg02928435,NA,NA,NA,NA,0.261089265,NA,Pax2,Pax2_Intergenic_upstream,19,44684159,44684208,44684159,44684160,50,-,CGGCCATTACGGGAAAGTTAGTGTGAAACATGTTAAATTATCCCCAAAGT,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-71886,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,19,44684083,44684169,87,*,87,12,0.643678161,1.338461538,0.137931034,3.16E-11,CpGisland,TRUE,BivProm2,
cg02929405,NA,NA,NA,NA,-0.389690405,NA,Nfib,Nfib_Intron,4,82619271,82619320,82619319,82619320,50,+,TGTTATTACTGTATAGCCCTGGCAAGGCTCAAAAGCAAGCAGACTTGACG,"Intron (Nfib-212/Nfib, intron 1 of 1)",4,82498321,82705750,207430,2,Nfib-212,86430,Nfib-212,Nfib,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,66,18028,ENSMUSG00000008575,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg02977776,NA,NA,0.09154544,NA,NA,NA,Adam1a,Adam1a_Exon,5,121539170,121539219,121539218,121539219,50,+,ACCTCATTTCTAGCTTTTGGACGATCAAGAAGAATTTTCAGCGCAAACCG,"Exon (Adam1a-202/Adam1a, exon 3 of 15)",5,121518613,121545482,26870,2,Adam1a-202,6263,Adam1a-202;Gm42878-201;Mapkapk5-201;Mapkapk5-204;Mapkapk5-202;Mapkapk5-203;Mapkapk5-205;Mapkapk5-211;Mapkapk5-209;Mapkapk5-213;Mapkapk5-208,Adam1a;Gm42878;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5;Mapkapk5,0;0;0;0;0;0;0;0;-3319;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,280668,ENSMUSG00000072647,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg03045876,NA,0.057586542,NA,NA,NA,NA,Hspa2,Hspa2_Exon,12,76405268,76405317,76405316,76405317,50,-,GGAGGAGTTCAAGCGCAAGCACAAGAAGGACATTGGGCCCAACAAGCGCG,"Exon (Hspa2-201/Hspa2, exon 2 of 2)",12,76404176,76406938,2763,1,Hspa2-201,1092,Hspa2-201;Hspa2-202,Hspa2;Hspa2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,15512,ENSMUSG00000059970,conserved gene and region,12,76404926,76405509,584,*,584,56,0.630136986,0.96623039,0.095890411,1.23E-41,CpGisland,TRUE,BivProm1,
cg03053409,NA,NA,NA,NA,-2.441144948,-1.550001179,Ncam1,Ncam1_threeUTR,9,49503656,49503705,49503704,49503705,50,+,TTTTATTTCAATACTATGACAAAAACACGTTTCACACTAAAATATTCACG,3' UTR,9,49502136,49798925,296790,2,Ncam1-204,295220,Ncam1-204;Ncam1-205;Ncam1-202,Ncam1;Ncam1;Ncam1,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,3,16,17967,ENSMUSG00000039542,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg03073112,-0.006604829,NA,NA,NA,NA,NA,Lcor,Lcor_Exon,19,41558781,41558830,41558829,41558830,50,-,GCACTGGTGATCAGTACAGCTATAGCTCTTTGGTAATGGGTTCACAAACG,"Exon (Lcor-201/Lcor, exon 8 of 8)",19,41482637,41562261,79625,1,Lcor-201,76144,Lcor-201;Lcor-204;Lcor-206;Lcor-202;Lcor-205,Lcor;Lcor;Lcor;Lcor;Lcor,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,25,212391,ENSMUSG00000025019,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx2,
cg03083106,NA,NA,NA,NA,-1.566105729,NA,Cycs-ps2,Cycs-ps2_Intergenic_upstream,5,101172198,101172247,101172198,101172199,50,+,CGCCTTTTTGACAAGAGACAAATGTTTCATTCAAATGCTGCATTTCGCAT,Distal Intergenic,5,101305578,101305869,292,1,Cycs-ps2-201,-133331,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,3,10,13065,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies5,
cg03095484,NA,NA,NA,NA,-0.878427461,-0.183395917,Nfix,Nfix_Exon,8,84716265,84716314,84716313,84716314,50,-,TTTGCCCTGGCCGCTACCGTTGGGCTGCGAACAACATAAATAGAGTGACG,"Exon (Nfix-204/Nfix, exon 9 of 11)",8,84704712,84773396,68685,2,Nfix-204,57082,Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-206;Nfix-205,Nfix;Nfix;Nfix;Nfix;Nfix;Nfix,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,20,49,18032,ENSMUSG00000001911,conserved gene but different region,8,84716235,84716387,153,*,153,15,0.62745098,1,0.098039216,1.26E-11,CpGisland,TRUE,TxEnh5,
cg03128260,NA,NA,NA,NA,-0.71825417,NA,Dennd1a,Dennd1a_Intron,2,38144157,38144206,38144205,38144206,50,+,TCTTAGGCTTCTCCAAAGTCCACACAGAATAGCAAAGAACAAAACTAACG,"Intron (Dennd1a-201/Dennd1a, intron 3 of 21)",2,37798991,38287375,488385,2,Dennd1a-201,143169,Dennd1a-201;Dennd1a-207;Dennd1a-210;Dennd1a-204;Dennd1a-202;Dennd1a-209;Dennd1a-208,Dennd1a;Dennd1a;Dennd1a;Dennd1a;Dennd1a;Dennd1a;Dennd1a,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,39,46,227801,ENSMUSG00000035392,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg03153971,NA,NA,NA,NA,0.982645782,NA,Frs2,Frs2_Exon,10,117077598,117077647,117077646,117077647,50,+,CTATTATTTTGCATAATCTCTTGCAACATGTTAAATAATTCTTCTGCACG,"Exon (Frs2-201/Frs2, exon 8 of 10)",10,117069427,117148510,79084,2,Frs2-201,70863,Frs2-201,Frs2,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,327826,ENSMUSG00000020170,conserved gene and region,,,,,,,,,,,,,TRUE,Tx6,
cg03182693,NA,NA,0.732643399,NA,NA,NA,Ctnnd1,Ctnnd1_fiveUTR,2,84624410,84624459,84624458,84624459,50,+,GTTCCTTCACAGAGGCCAAGATGCTGGCGGTCGACTCCACCTCTGAGTCG,5' UTR,2,84600071,84650745,50675,2,Ctnnd1-204,26286,Ctnnd1-204;Ctnnd1-206;Ctnnd1-207;Ctnnd1-208;Ctnnd1-209;Ctnnd1-216;Ctnnd1-220;Ctnnd1-221;Ctnnd1-222;Ctnnd1-224;Ctnnd1-203;Ctnnd1-211;Ctnnd1-212;Ctnnd1-213;Ctnnd1-214;Ctnnd1-215;Ctnnd1-218;Ctnnd1-219;Ctnnd1-210;Ctnnd1-205;Ctnnd1-223;Ctnnd1-201;Ctnnd1-202;Ctnnd1-228;Ctnnd1-217;Ctnnd1-225;Ctnnd1-229;Gm28635-201,Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Gm28635,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,4,12388,ENSMUSG00000034101,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx4,
cg03187959,NA,NA,-0.047253249,NA,NA,NA,Ing4,Ing4_Exon,6,125046920,125046969,125046968,125046969,50,+,TGACAAGTTGGCCACTGAGTATATGAGTAGTGCCCGCAGCCTGAGCTCCG,"Exon (Ing4-205/Ing4, exon 3 of 8)",6,125039760,125049002,9243,1,Ing4-205,7160,Acrbp-205;Acrbp-204;Acrbp-202;Acrbp-201;Acrbp-203;Ing4-205;Ing4-203;Ing4-201;Ing4-208;Ing4-207;Ing4-202;Ing4-209;Ing4-204;Ing4-206,Acrbp;Acrbp;Acrbp;Acrbp;Acrbp;Ing4;Ing4;Ing4;Ing4;Ing4;Ing4;Ing4;Ing4;Ing4,-2720;-2978;-2990;-2998;-4885;0;7084;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,5,28019,ENSMUSG00000030330,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx3,
cg03201458,NA,0.455035012,NA,NA,NA,NA,Nabp2,Nabp2_Exon,10,128409272,128409321,128409320,128409321,50,-,GTTCAGATTCTTGAGCCCAGGCTTGATATCCTTCACAAAGGTCTCCGTCG,Promoter (<=1kb),10,128401395,128409728,8334,2,Nabp2-202,407,Ankrd52-202;Nabp2-202;Nabp2-201;Nabp2-204;Nabp2-205;Nabp2-209;Nabp2-203;Nabp2-208;Nabp2-207;Nabp2-206;Rnf41-202;Rnf41-203;Rnf41-201,Ankrd52;Nabp2;Nabp2;Nabp2;Nabp2;Nabp2;Nabp2;Nabp2;Nabp2;Nabp2;Rnf41;Rnf41;Rnf41,0;0;0;0;-429;0;0;-92;0;0;-2336;-2392;-2425,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,69917,ENSMUSG00000025374,conserved gene and region,10,128409289,128409357,69,*,69,8,0.637681159,1.142857143,0.115942029,6.90E-07,CpGisland,TRUE,PromF3,
cg03256017,NA,NA,NA,-0.106716369,NA,NA,Srsf4,Srsf4_Exon,4,131884258,131884307,131884306,131884307,50,-,TTTCCTCTATTCTTCTAGTCTGTTATGTTCTGAACCCACACATGTTTTCG,Promoter (<=1kb),4,131884295,131897834,13540,1,Srsf4-204,0,Srsf4-202;Srsf4-203;Srsf4-204;Srsf4-201,Srsf4;Srsf4;Srsf4;Srsf4,0;0;0;-901,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,57317,ENSMUSG00000028911,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg03268781,-0.012090491,NA,NA,NA,NA,NA,Pou3f1,Pou3f1_Intron,4,124575875,124575924,124575875,124575876,50,+,CGCCCAGTAGAATATTGTATTAGTTGGTTGTGAGCTGTGTTCTCGTCAGG,"Intron (Gm2164-201/Gm2164-201, intron 1 of 1)",4,124656807,124660655,3849,1,Pou3f1-201,-80883,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,43,85,18991,ENSMUSG00000090125,mapped to different genes,4,124575578,124575876,299,*,299,39,0.765886288,0.889473684,0.130434783,6.52E-35,CpGisland,TRUE,,
cg03274991,NA,-0.164357074,NA,NA,NA,NA,Arhgef12,Arhgef12_fiveUTR,9,43105313,43105362,43105361,43105362,50,-,GGGACACAAAAGTCCAACTCAAAACTCCATTCAGTCATCTAGACCATCCG,Promoter (<=1kb),9,42963842,43105987,142146,2,Arhgef12-202,625,Arhgef12-202;Arhgef12-201;Arhgef12-205;Tlcd5-201;Tlcd5-203;Tlcd5-202,Arhgef12;Arhgef12;Arhgef12;Tlcd5;Tlcd5;Tlcd5,0;0;0;11208;11171;11182,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,5,69632,ENSMUSG00000059495,conserved gene and region,9,43105361,43106549,1189,*,1189,136,0.684608915,0.976237624,0.114381833,1.39E-111,CpGisland,TRUE,PromF3,
cg03295083,NA,NA,NA,NA,-0.626467821,NA,Nrxn1,Nrxn1_fiveUTR,17,90455928,90455977,90455928,90455929,50,-,CGCTGGTGAAGCAAGGGGCTCTATGCAAATCTGCAGTCTCCAAACAGCAA,Promoter (<=1kb),17,90036896,90455950,419055,2,Nrxn1-213,0,Gm10493-201;Nrxn1-202;Nrxn1-207;Nrxn1-216;Nrxn1-204;Nrxn1-217;Nrxn1-209;Nrxn1-201;Nrxn1-213;Nrxn1-206;Nrxn1-221;Nrxn1-208;Nrxn1-222;Nrxn1-218;Nrxn1-226,Gm10493;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,27,18189,ENSMUSG00000024109,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg03295832,NA,NA,NA,0.785569598,NA,NA,Fzd5,Fzd5_Exon,1,64735050,64735099,64735050,64735051,50,-,CGACGTGATGCCCACCACCAGGCACATGAAGTACTTGAGCATGAGCACCC,"Exon (Fzd5-201/Fzd5, exon 2 of 2)",1,64730558,64737751,7194,2,Fzd5-201,2652,Fzd5-201;Fzd5-202,Fzd5;Fzd5,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,3,14367,ENSMUSG00000045005,conserved gene and region,1,64734827,64735054,228,*,228,23,0.692982456,0.841463415,0.100877193,6.27E-18,CpGisland,TRUE,BivProm1,
cg03365311,NA,NA,NA,NA,-1.362853654,NA,Hsd17b12,Hsd17b12_Exon,2,94241383,94241432,94241431,94241432,50,+,TTGGGGTAAGGGCTTCCGGCTATTGAGTTATGTACAGCAAGCCCAGACCG,"Exon (Mir129b-201/Mir129b-201, exon 1 of 1)",2,94032689,94157964,125276,2,Hsd17b12-201,-83419,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,19,56348,ENSMUSG00000027195,mapped to different genes,2,94241115,94241769,655,*,655,63,0.630534351,0.978307255,0.096183206,7.48E-47,CpGisland,TRUE,BivProm1,
cg03369923,NA,NA,NA,NA,1.627928039,0.536386827,Ptprz1,Ptprz1_Exon,6,23000278,23000327,23000326,23000327,50,-,TCAACACTACCCCTGCTGCTTCAAGTAGTGATTCGGCCTTGCATGCTACG,"Exon (Ptprz1-201/Ptprz1, exon 12 of 30)",6,22875502,23052916,177415,1,Ptprz1-201,124776,Ptprz1-201;Ptprz1-206;Ptprz1-204;Ptprz1-203,Ptprz1;Ptprz1;Ptprz1;Ptprz1,0;0;0;13969,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,4,19283,ENSMUSG00000068748,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg03380023,0.053579027,NA,NA,NA,NA,NA,Akap6,Akap6_Intron,12,53124748,53124797,53124748,53124749,50,-,CGTTTAAGTGTTAAAAAATTTCATTAATGATGCATAGAGCTATCTACTTC,"Intron (Akap6-201/Akap6, intron 12 of 13)",12,52699383,53155599,456217,1,Akap6-201,425365,Akap6-201;Akap6-202,Akap6;Akap6,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,13,238161,ENSMUSG00000061603,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg03445175,0.360893748,NA,NA,NA,NA,NA,Maz,Maz_Exon,7,127025337,127025386,127025385,127025386,50,-,TAGGGCTTGTGCACAGCGCCGTCATGTGAGCGCACGTGGTAGCTCATGCG,"Exon (Maz-203/Maz, exon 2 of 6)",7,127022130,127026526,4397,2,Maz-203,1140,Gm42742-203;Gm42742-204;Gm42742-202;Kif22-202;Kif22-201;Kif22-205;Kif22-206;Maz-203;Maz-201;Maz-204;Maz-202;Maz-206;Maz-205;Prrt2-201;Prrt2-202;Prrt2-205;Prrt2-206;Prrt2-207,Gm42742;Gm42742;Gm42742;Kif22;Kif22;Kif22;Kif22;Maz;Maz;Maz;Maz;Maz;Maz;Prrt2;Prrt2;Prrt2;Prrt2;Prrt2,0;0;0;3571;17085;2730;7318;0;0;0;0;0;0;0;0;-4381;-4200;-4982,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,17,17188,ENSMUSG00000030678,conserved gene and region,7,127025353,127025621,269,*,269,30,0.669144981,1.002359955,0.111524164,1.16E-24,CpGisland,TRUE,PromF3,
cg03469472,-0.025579788,NA,NA,NA,NA,NA,Rc3h1,Rc3h1_fiveUTR,1,160906486,160906535,160906486,160906487,50,+,CGAGCAACAAGATGGCCCCTGCTGCAGGAGCAGCCTCAGCAGCAGCAGGT,Promoter (<=1kb),1,160906418,160974978,68561,1,Rc3h1-202,68,Rc3h1-202;Rc3h1-204,Rc3h1;Rc3h1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,8,381305,ENSMUSG00000040423,conserved gene but different region,1,160906172,160906487,316,*,316,39,0.731012658,0.927732611,0.123417722,7.65E-34,CpGisland,TRUE,PromF4,
cg03475710,-0.114875877,NA,NA,NA,NA,NA,Mecom,Mecom_Intron,3,30220930,30220979,30220978,30220979,50,+,ACTTTGCTGACAGCTTGTCACATTTCACTGACTGTCTGTCTGGGGTACCG,"Intron (Mecom-212/Mecom, intron 1 of 15)",3,29951299,30509733,558435,2,Mecom-212,288754,Mecom-212;Mecom-210;Mecom-213;Mecom-207;Mecom-208;Mecom-211,Mecom;Mecom;Mecom;Mecom;Mecom;Mecom,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,57,80,14013,ENSMUSG00000027684,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA7,
cg03523182,-0.00039103,NA,NA,NA,NA,NA,Jade1,Jade1_Exon,3,41581233,41581282,41581233,41581234,50,+,CGCCTTCCCAGCAGCAGTGAGGATTCTGACGACAATGGCAGTAAGTCCTG,"Exon (Jade1-201/Jade1, exon 2 of 11)",3,41555731,41616864,61134,1,Jade1-201,25502,Jade1-201;Jade1-210;Jade1-214;Jade1-202;Jade1-209;Jade1-204;Jade1-203;Jade1-211;Jade1-206;Jade1-212,Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,16,269424,ENSMUSG00000025764,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA1,
cg03571891,NA,NA,NA,NA,0.240660499,NA,Pax5,Pax5_Exon,4,44703360,44703409,44703360,44703361,50,+,CGCCTACTTACTATGCATGGATGCAAACGGGTCGTGCTTACAGTGTATTT,"Exon (Pax5-208/Pax5, exon 1 of 5)",4,44524757,44710487,185731,2,Pax5-201,7078,Pax5-201;Pax5-202;Pax5-203;Pax5-204;Pax5-205;Pax5-207;Pax5-206;Pax5-209;Pax5-210;Pax5-212;Pax5-213;Pax5-214;Pax5-215;Pax5-208;Pax5-216;Pax5-217;Pax5-218;Pax5-219,Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,45,18507,ENSMUSG00000014030,conserved gene but different region,4,44703085,44703505,421,*,421,37,0.617577197,0.926154944,0.087885986,3.03E-26,CpGisland,TRUE,BivProm2,
cg03600422,-0.002059974,NA,NA,NA,NA,NA,Blcap,Blcap_fiveUTR,2,157558115,157558164,157558163,157558164,50,+,GATGAGGAGGACGGGCAGCAGCCACTGGAGGCAATACATGATCTCTGCCG,5' UTR,2,157556362,157566337,9976,2,Blcap-202,8173,Blcap-202;Blcap-201;Blcap-205;Blcap-204;Nnat-205;Nnat-208;Nnat-202;Nnat-210;Nnat-207;Nnat-209;Nnat-206;Nnat-201;Nnat-204;Nnat-203,Blcap;Blcap;Blcap;Blcap;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat,0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,9,53619,ENSMUSG00000067787,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg03613012,NA,NA,NA,NA,-0.926951762,NA,Dscaml1,Dscaml1_fiveUTR,9,45430415,45430464,45430415,45430416,50,+,CGCACGGCCGGCCACAGGACCACCTCCCCGGAGAATAGGGCCTCTTTATG,5' UTR,9,45426628,45571224,144597,1,Dscaml1-208,3787,Dscaml1-208;Dscaml1-209;Dscaml1-202;Dscaml1-206;Dscaml1-211;Dscaml1-201;Dscaml1-210,Dscaml1;Dscaml1;Dscaml1;Dscaml1;Dscaml1;Dscaml1;Dscaml1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,32,114873,ENSMUSG00000032087,conserved gene and region,9,45430237,45430444,208,*,208,27,0.793269231,0.87394958,0.129807692,3.26E-24,CpGisland,TRUE,BivProm1,
cg03630714,NA,0.005159319,NA,NA,NA,NA,Clpb,Clpb_Intron,7,101692252,101692301,101692252,101692253,50,-,CGGTGGAAGGCACTTTGATGTTACAACCTCTCGGTGATGCTTTACTTAGT,"Intron (Clpb-205/Clpb, intron 3 of 5)",7,101663633,101722922,59290,1,Clpb-205,28619,Clpb-205;Clpb-201;Clpb-202;Clpb-206;Clpb-211;Clpb-203;Clpb-208;Clpb-207;Clpb-210,Clpb;Clpb;Clpb;Clpb;Clpb;Clpb;Clpb;Clpb;Clpb,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,21,20480,ENSMUSG00000001829,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg03657398,NA,NA,NA,NA,NA,-0.344871954,Prdm6,Prdm6_Intron,18,53538480,53538529,53538480,53538481,50,-,CGTTTTGTTTTTATTTTGAGGCTGACAATAATGTTTATTGGCATGTGTTC,"Intron (Prdm6-201/Prdm6, intron 3 of 6)",18,53464516,53575857,111342,1,Prdm6-201,73964,Prdm6-201;Prdm6-203;Prdm6-204,Prdm6;Prdm6;Prdm6,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,10,16,225518,ENSMUSG00000069378,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg03679521,0.016642884,NA,NA,NA,NA,NA,Neurod2,Neurod2_fiveUTR,11,98329605,98329654,98329605,98329606,50,-,CGGAGCGAGTGTGGCATCTCTACCAGGCGGGGTACCAGCCTCTATGCCAG,Promoter (<=1kb),11,98325415,98329648,4234,2,Neurod2-201,0,Neurod2-201,Neurod2,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,5,22,18013,ENSMUSG00000038255,conserved gene and region,11,98329512,98329756,245,*,245,22,0.657142857,0.835658915,0.089795918,5.08E-16,CpGisland,TRUE,ReprPC1,
cg03724931,NA,0.10908364,NA,NA,NA,NA,Smg6,Smg6_Intron,11,75054288,75054337,75054288,75054289,50,+,CGATCATTTCCTCACTTGTTTAAATAGTGCAGCTTGTGTTGGCAGTGCTC,"Intron (Smg6-201/Smg6, intron 13 of 18)",11,74925823,75164448,238626,1,Smg6-201,128465,Smg6-201;Smg6-202;Smg6-204,Smg6;Smg6;Smg6,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,34,103677,ENSMUSG00000038290,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg03754039,NA,NA,NA,NA,0.090962719,NA,Pitx2,Pitx2_Exon,3,129213909,129213958,129213957,129213958,50,+,CCAGGAAGCCCGCCTCTGGTTTTAAGATGTTAGGCCAACAGGGAAGCGCG,Promoter (<=1kb),3,129213932,129216774,2843,1,Pitx2-208,0,Pitx2-207;Pitx2-201;Pitx2-203;Pitx2-204;Pitx2-208;Pitx2-202;Pitx2-206,Pitx2;Pitx2;Pitx2;Pitx2;Pitx2;Pitx2;Pitx2,0;0;0;0;0;0;-317,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,24,18741,ENSMUSG00000028023,mapped to different genes,3,129213666,129214125,460,*,460,39,0.67173913,0.776152981,0.084782609,5.23E-27,CpGisland,TRUE,BivProm1,
cg03775588,NA,NA,NA,NA,0.637879727,NA,Pax6,Pax6_Exon,2,105682292,105682341,105682292,105682293,50,+,CGGAGCGGAGCACTGTCACAAAGTGACAAGGCTGCCACAAGCGCCCCGAC,"Exon (Pax6-221/Pax6, exon 1 of 2)",2,105668900,105697364,28465,1,Pax6-206,13392,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-209;Pax6-216,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,31,78,18508,ENSMUSG00000027168,conserved gene and region,2,105682176,105682419,244,*,244,18,0.524590164,1.074626866,0.073770492,1.12E-11,CpGisland,TRUE,BivProm2,
cg03787614,NA,NA,0.148407045,NA,NA,NA,Grik2,Grik2_Exon,10,49244318,49244367,49244318,49244319,50,-,CGTATACCTTGCTGCATGAGAGCTCCAACTCCAAACCAGAAACTATTTAG,"Exon (Grik2-207/Grik2, exon 13 of 17)",10,49094833,49788766,693934,2,Grik2-207,544399,Grik2-207;Grik2-203;Grik2-202;Grik2-205;Grik2-209;Grik2-204;Grik2-201;Grik2-208,Grik2;Grik2;Grik2;Grik2;Grik2;Grik2;Grik2;Grik2,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,12,14806,ENSMUSG00000056073,conserved gene but different region,,,,,,,,,,,,,TRUE,"HET1,Quies2",
cg03824676,NA,NA,-0.03900075,NA,NA,NA,Rbm39,Rbm39_threeUTR,2,156177842,156177891,156177842,156177843,50,+,CGCCCATTTCCGTTGGAGGGTTGGGACTGTAAGAGCTTGATGCCACCTCT,3' UTR,2,156147239,156180238,33000,2,Rbm39-203,2347,Rbm39-203;Rbm39-217;Rbm39-215;Rbm39-201;Rbm39-225;Rbm39-223;Rbm39-204;Rbm39-216;Rbm39-221;Rbm39-213;Rbm39-214;Rbm39-218;Rbm39-219;Rbm39-210;Rbm39-224;Rbm39-212;Rbm39-202;Rbm39-208;Rbm39-222;Rbm39-205;Rbm39-211,Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,11,13,170791,ENSMUSG00000027620,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx4,
cg03843584,NA,NA,NA,NA,-0.231485724,NA,Atp5g2,Atp5g2_Promoter,15,102672380,102672429,102672428,102672429,50,-,CCCGGATGAGGCCCCGAGTTTAATTATCCTCGCGGAGGAATTTCAATGCG,Promoter (<=1kb),15,102665801,102672352,6552,2,Atp5g2-203,-77,Atp5g2-202;Atp5g2-201;Atp5g2-204;Atp5g2-203,Atp5g2;Atp5g2;Atp5g2;Atp5g2,-1253;-4631;-4637;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,10,18,67942,ENSMUSG00000062683,mapped to different genes,15,102672078,102672489,412,*,412,37,0.621359223,0.940117175,0.089805825,1.33E-26,CpGisland,TRUE,,
cg03846926,NA,NA,NA,-0.064146257,NA,NA,Skida1,Skida1_Promoter,2,18048822,18048871,18048822,18048823,50,-,CGTCCGGAGACACCTTCATCAATTAATTCCCCTAAAGCCAGCGCTGATTG,Promoter (<=1kb),2,18044083,18049051,4969,2,Skida1-202,180,Skida1-205;Skida1-202;Skida1-201;Skida1-203;Skida1-204,Skida1;Skida1;Skida1;Skida1;Skida1,0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,12,31,72668,ENSMUSG00000054074,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF5,
cg03862352,NA,NA,NA,NA,0.434463528,NA,Lhfpl3,Lhfpl3_Exon,5,22746291,22746340,22746291,22746292,50,+,CGTGCTGTGGGCCATCTTCACCATCTGCTTTGCCATCGTCAACGTGGTGT,Promoter (<=1kb),5,22746059,23275597,529539,1,Lhfpl3-202,232,Lhfpl3-202,Lhfpl3,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,11,269629,ENSMUSG00000106379,conserved gene and region,5,22746271,22746758,488,*,488,33,0.610655738,0.733834586,0.067622951,9.76E-20,CpGisland,TRUE,,
cg03957108,0.670688998,NA,NA,NA,NA,NA,Otx1,Otx1_Promoter,11,22003031,22003080,22003031,22003032,50,+,CGAATAAAATACGGTAACAGAATATGATGGAGGGCACACTGTTTCCTTAA,Promoter (<=1kb),11,21996858,22002897,6040,2,Otx1-202,-134,Ehbp1-201;Ehbp1-202;Ehbp1-207;Otx1-201;Otx1-203;Otx1-202,Ehbp1;Ehbp1;Ehbp1;Otx1;Otx1;Otx1,0;0;0;0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,8,13,18423,ENSMUSG00000005917,conserved gene and region,11,22002787,22003135,349,*,349,29,0.581661891,0.986452242,0.083094556,5.69E-20,CpGisland,TRUE,BivProm2,
cg03957964,NA,NA,NA,NA,-0.111509743,NA,Kcnma1,Kcnma1_Exon,14,24003796,24003845,24003796,24003797,50,-,CGTCCGCCAGAGCAAGATGATGAAGAGGCCCCCGAAGAAAGTCACCATGG,"Exon (4930519K11Rik-201/4930519K11Rik-201, exon 1 of 4)",14,23292291,24004859,712569,2,Kcnma1-205,1014,Kcnma1-205;Kcnma1-212;Kcnma1-211;Kcnma1-229;Kcnma1-234;Kcnma1-223;Kcnma1-214;Kcnma1-216;Kcnma1-219;Kcnma1-220;Kcnma1-224;Kcnma1-233;Kcnma1-236;Kcnma1-237;Kcnma1-213;Kcnma1-228;Kcnma1-221;Kcnma1-225;Kcnma1-226;Kcnma1-230;Kcnma1-235;Kcnma1-238;Kcnma1-215,Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1;Kcnma1,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,41,16531,ENSMUSG00000063142,conserved gene and region,14,24003668,24003829,162,*,162,18,0.691358025,0.954500818,0.111111111,6.60E-15,CpGisland,TRUE,PromF5,
cg04004289,NA,NA,NA,NA,-0.974071762,NA,Fezf2,Fezf2_fiveUTR,14,12345697,12345746,12345745,12345746,50,-,TTCAGCTGACATCACATGAAGTCACTTGAAGTGGAATGACATGGGCGGCG,Promoter (<=1kb),14,12342094,12345844,3751,2,Fezf2-203,98,Fezf2-203;Fezf2-201;Fezf2-202,Fezf2;Fezf2;Fezf2,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,13,45,54713,ENSMUSG00000021743,conserved gene and region,14,12345742,12345947,206,*,206,23,0.67961165,1.001479603,0.111650485,5.22E-19,CpGisland,TRUE,BivProm2,
cg04019067,NA,NA,-0.176777118,NA,NA,NA,Fgfr2,Fgfr2_Intron,7,132666029,132666078,132666077,132666078,50,-,ACCTAATATAATCCATAGATCAATGGGTTTGGAGCTAATTAAGGCAACCG,"Intron (Lhpp-201/Lhpp, intron 6 of 6)",7,130162451,133123350,2960900,2,Fgfr2-217,457272,Fgfr2-217;Lhpp-201;Lhpp-202;Lhpp-204;Lhpp-206;Lhpp-207,Fgfr2;Lhpp;Lhpp;Lhpp;Lhpp;Lhpp,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,58,79,14183,ENSMUSG00000030849,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk4,
cg04050843,NA,NA,NA,NA,-0.484614602,NA,Kcnh4,Kcnh4_Exon,11,100759551,100759600,100759551,100759552,50,-,CGATGGTGTCCAGGAAGGTGTTTTGCGGGGCCAGCAACCCCTTCATGACC,Promoter (<=1kb),11,100740376,100759740,19365,2,Kcnh4-201,140,Hcrt-202;Hcrt-201;Kcnh4-201;Kcnh4-202,Hcrt;Hcrt;Kcnh4;Kcnh4,3328;3331;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,380728,ENSMUSG00000035355,conserved gene and region,11,100759517,100759733,217,*,217,29,0.737327189,0.983434912,0.133640553,2.11E-26,CpGisland,TRUE,,
cg04084157,2.56352673,NA,NA,NA,NA,NA,Vgf,Vgf_Intron,5,137030036,137030085,137030084,137030085,50,-,AGCATTTCATTCATTCATTCATTCATTCATTTCCCGGAGCTCCGCTAGCG,"Intron (Vgf-204/Vgf, intron 3 of 4)",5,137026392,137033351,6960,1,Vgf-204,3644,Ap1s1-201;Vgf-204;Vgf-201;Vgf-202;Vgf-203,Ap1s1;Vgf;Vgf;Vgf;Vgf,16050;0;-210;-279;-616,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,381677,ENSMUSG00000037428,conserved gene but different region,5,137029992,137030508,517,*,517,45,0.632495164,0.930227909,0.087040619,1.35E-31,CpGisland,TRUE,BivProm1,
cg04118146,NA,NA,0.174287106,NA,NA,NA,Uchl3,Uchl3_Exon,14,101685616,101685665,101685664,101685665,50,-,ACGAAGGCCTCATCATTGTGTCACCATGCATCCCTGCCCTGGGTCAAACG,"Exon (Uchl3-202/Uchl3, exon 5 of 8)",14,101653994,101696125,42132,1,Uchl3-201,31622,Uchl3-201;Uchl3-205;Uchl3-202,Uchl3;Uchl3;Uchl3,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,50933,ENSMUSG00000022111,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx3,
cg04121944,0.001454358,NA,NA,NA,NA,NA,Maz,Maz_Exon,7,127025389,127025438,127025437,127025438,50,-,CCTTGCGCTTGAAGCGCTGCTGGCACACCGGGCACTGGTAGGGCTTCTCG,"Exon (Maz-203/Maz, exon 2 of 6)",7,127022130,127026526,4397,2,Maz-203,1088,Gm42742-203;Gm42742-204;Gm42742-202;Kif22-202;Kif22-201;Kif22-205;Kif22-206;Maz-203;Maz-201;Maz-204;Maz-202;Maz-206;Maz-205;Prrt2-201;Prrt2-202;Prrt2-205;Prrt2-206,Gm42742;Gm42742;Gm42742;Kif22;Kif22;Kif22;Kif22;Maz;Maz;Maz;Maz;Maz;Maz;Prrt2;Prrt2;Prrt2;Prrt2,0;0;0;3519;17033;2678;7266;0;0;0;0;0;0;0;0;-4433;-4252,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,17,17188,ENSMUSG00000030678,conserved gene and region,7,127025353,127025621,269,*,269,30,0.669144981,1.002359955,0.111524164,1.16E-24,CpGisland,TRUE,PromF3,
cg04130851,NA,NA,NA,-0.379845347,NA,NA,Etv6,Etv6_fiveUTR,6,134222896,134222945,134222896,134222897,50,-,CGTAGCCCAGTGGCTCAAGTGGGCTGAAAATGAGTTTTCTTTAAGGCCAA,5' UTR,6,134035700,134270155,234456,1,Etv6-201,187196,Etv6-201;Etv6-202;Etv6-204,Etv6;Etv6;Etv6,0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,7,14011,ENSMUSG00000030199,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhA9,
cg04142398,NA,NA,-0.363244516,NA,NA,NA,Mef2c,Mef2c_threeUTR,13,83652834,83652883,83652834,83652835,50,+,CGAAACTCACCAGGTCTGCTGGTCTCACCTGGTAACTTGAACAAGAATAT,3' UTR,13,83504034,83663343,159310,1,Mef2c-218,148800,Mef2c-218;Mef2c-228;Mef2c-201;Mef2c-202;Mef2c-222;Mef2c-223;Mef2c-227;Mef2c-213;Mef2c-214;Mef2c-215;Mef2c-212;Mef2c-203;Mef2c-224;Mef2c-219;Mef2c-225;Mef2c-230;Mef2c-220;Mef2c-211,Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,10,41,17260,ENSMUSG00000005583,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA10,
cg04197544,NA,NA,NA,NA,2.146946758,NA,Gm7847,Gm7847_Intergenic_upstream,18,26263050,26263099,26263098,26263099,50,-,AAAATGCTTAATATTAATAATAAAATGCATTCACTGCAAGCCTCTAGGCG,Distal Intergenic,18,25823581,25824357,777,2,Gm7847-201,-438742,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,11,22,665916,NA,mapped to different genes,,,,,,,,,,,,,TRUE,HET2,
cg04207566,NA,NA,NA,NA,1.983573487,NA,Tbx2,Tbx2_fiveUTR,11,85832800,85832849,85832848,85832849,50,+,TGTGAGATAGTCACAGTTTTCCAGAGATCACGACAAGATCTAACCAGTCG,Promoter (<=1kb),11,85832551,85841948,9398,1,Tbx2-201,249,Tbx2-201,Tbx2,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,12,14,21385,ENSMUSG00000000093,mapped to different genes,11,85832848,85833430,583,*,583,90,0.804459691,0.963848782,0.154373928,7.11E-88,CpGisland,TRUE,BivProm1,
cg04236764,NA,NA,NA,NA,0.013942039,NA,Dscam,Dscam_Exon,16,96640876,96640925,96640876,96640877,50,+,CGTTTTGGACAACTGACTTAATGAGTGGAGGAATTGTACCTGAAAGCAGG,"Exon (Dscam-201/Dscam, exon 27 of 33)",16,96590840,97170752,579913,2,Dscam-201,529827,Dscam-201,Dscam,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,10,12,13508,ENSMUSG00000050272,conserved gene and region,,,,,,,,,,,,,TRUE,HET2,
cg04244133,NA,0.035186952,NA,NA,NA,NA,Celf5,Celf5_Exon,10,81462669,81462718,81462669,81462670,50,+,CGAAACACTTGCTCTGGTTGGTAGCTCGATCCATAAACACCTTGGAGGAA,"Exon (Celf5-201/Celf5, exon 11 of 12)",10,81459227,81482709,23483,2,Celf5-201,19991,Celf5-201;Celf5-202;Celf5-204;Celf5-203;Celf5-209;Celf5-207;Celf5-206,Celf5;Celf5;Celf5;Celf5;Celf5;Celf5;Celf5,0;0;0;0;0;8089;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,3,319586,ENSMUSG00000034818,mapped to different genes,,,,,,,,,,,,,TRUE,,Satellite
cg04276865,NA,NA,NA,NA,-0.781519652,NA,Hif1an,Hif1an_Intron,19,44640426,44640475,44640474,44640475,50,+,ACCCAGCCTTGTAAATAAATACTAAATATATATGAACAGAGACGACAGCG,"Intron (Gm35460-201/Gm35460-201, intron 5 of 6)",19,44562850,44576274,13425,1,Hif1an-201,77576,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,25,31,319594,ENSMUSG00000036450,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC3,
cg04307172,-0.280805804,NA,NA,NA,NA,NA,Nr1d1,Nr1d1_fiveUTR,11,98775273,98775322,98775321,98775322,50,+,TGGGACAGAGGGCTCTGCGCAGGCGCCAGCAGCCCAGGGTTCCCGGGCCG,Promoter (<=1kb),11,98767932,98775333,7402,2,Nr1d1-201,11,Nr1d1-201;Nr1d1-202,Nr1d1;Nr1d1,0;-4847,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,9,217166,ENSMUSG00000020889,conserved gene but different region,11,98775184,98775428,245,*,245,18,0.624489796,0.760869565,0.073469388,1.20E-11,CpGisland,TRUE,TSS1,
cg04317929,-0.040831517,-0.037527598,NA,NA,NA,NA,Lrp1,Lrp1_Exon,10,127582675,127582724,127582723,127582724,50,+,CTTCTATGCACTGACCGGCAGGCTCAGGACAGGTCTGTTCGTCAGAGCCG,"Exon (Lrp1-207/Lrp1, exon 2 of 3)",10,127538161,127621148,82988,2,Lrp1-201,38424,Lrp1-201;Lrp1-206;Lrp1-207;Lrp1-204,Lrp1;Lrp1;Lrp1;Lrp1,0;-790;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,8,16971,ENSMUSG00000040249,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg04318752,0.004064489,NA,NA,NA,NA,NA,Evx2,Evx2_threeUTR,2,74654034,74654083,74654034,74654035,50,+,CGTCCAAGTTACCAAAATGAAAATCGGCAATTGAGATGATAAGAACGTGG,3' UTR,2,74652991,74659557,6567,2,Evx2-201,5474,Evx2-201;Evx2-202,Evx2;Evx2,0;5336,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,8,35,14029,ENSMUSG00000001815,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg04335591,-0.006743704,NA,NA,NA,NA,NA,Btrc,Btrc_Intron,19,45476372,45476421,45476420,45476421,50,-,TAACAATTTCCCAATAAACTCTGACTTGTAATAACGTCGGCAAGAGTCCG,"Intron (Btrc-204/Btrc, intron 1 of 2)",19,45363734,45507736,144003,1,Btrc-204,112638,Btrc-204;Btrc-201;Btrc-210;Btrc-202;Btrc-203;Btrc-209,Btrc;Btrc;Btrc;Btrc;Btrc;Btrc,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,63,98,12234,ENSMUSG00000025217,conserved gene and region,19,45476406,45476490,85,*,85,8,0.623529412,1.011904762,0.094117647,3.48E-06,CpGisland,TRUE,BivProm4,
cg04342828,-0.55161399,NA,NA,NA,NA,NA,Insm1,Insm1_Exon,2,146223690,146223739,146223690,146223691,50,+,CGCCGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTACAGCT,"Exon (Insm1-201/Insm1, exon 1 of 1)",2,146221921,146225020,3100,1,Insm1-201,1769,Insm1-201,Insm1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,3,53626,ENSMUSG00000068154,conserved gene and region,2,146221662,146223777,2116,*,2116,283,0.75,0.952043905,0.133742911,1.29E-253,CpGisland,TRUE,BivProm2,
cg04356548,-0.138924568,NA,NA,NA,NA,NA,Ubn2,Ubn2_fiveUTR,6,38433904,38433953,38433904,38433905,50,-,CGCATGCGCCCGCTCAGCGGCCTGCTTCTATTTATGTGGGGGATCCAACA,Promoter (<=1kb),6,38433950,38512763,78814,1,Ubn2-205,0,Ubn2-205;Ubn2-201,Ubn2;Ubn2,0;-220,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,1,320538,ENSMUSG00000038538,conserved gene but different region,6,38433875,38434811,937,*,937,131,0.74493063,1.008594835,0.139807898,8.71E-121,CpGisland,TRUE,TSS1,
cg04398268,NA,NA,NA,-0.148431872,NA,NA,Fam222b,Fam222b_fiveUTR,11,78153930,78153979,78153978,78153979,50,+,AAAGTGCCAGCCAAAAGCATACTCAAGGACTTTGACGGCACCCGAGCCCG,5' UTR,11,78094660,78156700,62041,1,Fam222b-201,59270,Fam222b-201;Fam222b-202;Fam222b-203;Gm12571-201;Traf4-203,Fam222b;Fam222b;Fam222b;Gm12571;Traf4,0;0;0;-4492;11610,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,10,21,216971,ENSMUSG00000037750,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg04407088,-0.001417651,NA,NA,NA,NA,NA,Nkx2-2,Nkx2-2_Promoter,2,147195193,147195242,147195193,147195194,50,+,CGTGAGTCAAAATATTGGCCATATGTTCAGCGGTAATAAATTGGGTATGA,Promoter (<=1kb),2,147186305,147194243,7939,2,Nkx2-2-202,-950,Nkx2-2-202;Nkx2-2-204,Nkx2-2;Nkx2-2,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,30,18088,ENSMUSG00000027434,conserved gene and region,2,147194844,147195372,529,*,529,51,0.674858223,0.847064364,0.096408318,4.22E-38,CpGisland,TRUE,BivProm2,
cg04422517,NA,NA,NA,NA,0.257808636,NA,Epb41l1,Epb41l1_fiveUTR,2,156493905,156493954,156493905,156493906,50,+,CGTGCTGGTCACCATGACAACAGAGACAGGCCCCGACTCTGAGGTGAAGA,5' UTR,2,156420909,156543214,122306,1,Epb41l1-203,72996,Epb41l1-203;Epb41l1-204;Epb41l1-208;Epb41l1-206;Epb41l1-202;Epb41l1-205;Epb41l1-201,Epb41l1;Epb41l1;Epb41l1;Epb41l1;Epb41l1;Epb41l1;Epb41l1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,4,13821,ENSMUSG00000027624,conserved gene and region,,,,,,,,,,,,,TRUE,PromF1,
cg04447890,-0.145956529,NA,NA,NA,NA,NA,Wls,Wls_fiveUTR,3,159839935,159839984,159839935,159839936,50,+,CGCAAAAATGGCTGGGGCAATTATAGAAAACATGAGCACCAAGAAGCTGT,Promoter (<=1kb),3,159839672,159936023,96352,1,Wls-201,263,Wls-201;Wls-205;Wls-207;Wls-204;Wls-206;Wls-202,Wls;Wls;Wls;Wls;Wls;Wls,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,3,68151,ENSMUSG00000028173,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg04516741,0.02861273,NA,0.043722135,NA,NA,NA,Skor1,Skor1_Intron,9,63139729,63139778,63139729,63139730,50,+,CGCTTAAAGGCAGATGGATCTAACCAAAATTAAAGCAAACTTAGGCATTA,"Intron (Skor1-203/Skor1, intron 7 of 8)",9,63138170,63147011,8842,2,Skor1-203,7233,Skor1-203;Skor1-202;Skor1-201,Skor1;Skor1;Skor1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,6,15,207667,ENSMUSG00000022245,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg04523259,NA,NA,NA,NA,0.226585915,NA,Sfrp2,Sfrp2_Exon,3,83766716,83766765,83766716,83766717,50,-,CGGCTGCCCAACCTGCTGGGCCACGAGACCATGAAGGAGGTGCTGGAGCA,Promoter (<=1kb),3,83766321,83774316,7996,1,Sfrp2-201,395,Sfrp2-201;Sfrp2-202;Sfrp2-203,Sfrp2;Sfrp2;Sfrp2,0;0;-88,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,4,20319,ENSMUSG00000027996,conserved gene and region,3,83766337,83767061,725,*,725,73,0.686896552,0.872888904,0.100689655,9.57E-56,CpGisland,TRUE,BivProm1,
cg04567783,NA,0.216396562,0.027475843,0.564529248,0.542079366,0.117288486,Pax6,Pax6_Intron,2,105689960,105690009,105689960,105689961,50,-,CGGACAGTGATTAATGATAGCAGAGCAGAGGGGTTAACACACTTCACTGA,"Intron (Pax6-206/Pax6, intron 7 of 12)",2,105668900,105697364,28465,1,Pax6-206,21060,Pax6-206;Pax6-207;Pax6-210;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-216;Pax6-218,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-2474,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,78,18508,ENSMUSG00000027168,conserved gene and region,2,105689929,105689961,33,*,33,6,0.727272727,1.546875,0.181818182,2.19E-06,CpGisland,TRUE,ReprPC1,
cg04585931,-0.121878579,NA,NA,NA,NA,NA,Foxa2,Foxa2_Intron,2,148036970,148037019,148037018,148037019,50,-,CCTCCCATCCCACGTTGTTGGTTTTCTGTGTGTGGCTTTTGGTGTGAGCG,"Intron (9030622O22Rik-203/9030622O22Rik-203, intron 1 of 2)",2,148044240,148045464,1225,2,Foxa2-203,8494,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,6,25,15376,ENSMUSG00000037025,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg04589802,NA,NA,NA,-0.008518002,NA,NA,4933402J07Rik,4933402J07Rik_Intergenic_downstream,8,87660423,87660472,87660471,87660472,50,-,AAACCCCCCGCTGTATTTTTAATGGGGGCAGTGACTAATTTAGCCCTACG,Distal Intergenic,8,87563853,87589424,25572,1,4933402J07Rik-201,96619,Zfp423-203;Zfp423-202;Zfp423-201,Zfp423;Zfp423;Zfp423,0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,5,5,330820,ENSMUSG00000069971,mapped to different genes,8,87660067,87660482,416,*,416,27,0.622596154,0.680809795,0.064903846,8.30E-16,CpGisland,TRUE,,
cg04598984,NA,NA,NA,NA,-0.048251571,NA,Brpf1,Brpf1_Exon,6,113317643,113317692,113317691,113317692,50,+,CAACATCTTCAGCGAGCCGGTCCCTCTGTCTGAGGTAACCGAATTGGACG,"Exon (Brpf1-204/Brpf1, exon 6 of 14)",6,113307137,113324857,17721,1,Brpf1-204,10506,Brpf1-204;Brpf1-209;Brpf1-203;Brpf1-202;Brpf1-201;Brpf1-210;Brpf1-208;Brpf1-205;Brpf1-207;Brpf1-206,Brpf1;Brpf1;Brpf1;Brpf1;Brpf1;Brpf1;Brpf1;Brpf1;Brpf1;Brpf1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,16,78783,ENSMUSG00000001632,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg04611179,-0.211168984,NA,NA,NA,NA,NA,Bmi1,Bmi1_Promoter,2,18676838,18676887,18676838,18676839,50,+,CGGACTCCGAGCCATTTTGGAGCCGGTGTCAGTTTCCACTCTGCCTTCAG,Promoter (<=1kb),2,18677018,18686629,9612,1,Bmi1-201,-131,Bmi1-201;Bmi1-203;Bmi1-206;Bmi1-202;Bmi1-207;Bmi1-204;Bmi1-205;Commd3-212;Commd3-201;Commd3-210;Commd3-205;Commd3-211;Commd3-206;Commd3-203;Commd3-204;Commd3-207;Commd3-202;Commd3-208;Commd3-209,Bmi1;Bmi1;Bmi1;Bmi1;Bmi1;Bmi1;Bmi1;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3;Commd3,0;-393;-920;0;-3487;-4107;-4220;4454;4415;4405;4403;4402;4315;3180;2877;2753;2491;2414;2189,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,3,6,12151,ENSMUSG00000026739,conserved gene but different region,2,18676145,18676890,746,*,746,96,0.719839142,1.004713805,0.128686327,1.37E-84,CpGisland,TRUE,TSS2,Low_complexity
cg04661107,NA,NA,NA,NA,-0.34929644,0.274779421,Nsfl1c,Nsfl1c_Exon,2,151503141,151503190,151503141,151503142,50,+,CGAGTGACCAAGAGCCCTGGAGAGACCAGTAAACCGAGAGTGAGTATAAG,"Exon (Nsfl1c-202/Nsfl1c, exon 5 of 10)",2,151494182,151511310,17129,1,Nsfl1c-202,8959,Nsfl1c-202;Nsfl1c-209;Nsfl1c-204;Nsfl1c-201;Nsfl1c-203;Nsfl1c-205;Nsfl1c-210;Nsfl1c-208;Nsfl1c-206,Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c;Nsfl1c,0;0;8851;0;0;0;0;0;-547,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,386649,ENSMUSG00000027455,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg04665204,-0.036520689,-0.004483815,NA,NA,NA,NA,Bahcc1,Bahcc1_Intron,11,120280710,120280759,120280758,120280759,50,-,GGCAGGCCCATTTGCATAAATCCTCCGAGCTCCTCCAAACACGATTGGCG,"Intron (Bahcc1-203/Bahcc1, intron 14 of 27)",11,120232947,120292282,59336,1,Bahcc1-203,47763,Bahcc1-203;Bahcc1-201;Bahcc1-202,Bahcc1;Bahcc1;Bahcc1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,6,11,268515,ENSMUSG00000039741,conserved gene and region,11,120280511,120280767,257,*,257,24,0.595330739,1.070461645,0.093385214,7.46E-18,CpGisland,TRUE,EnhWk6,
cg04690108,NA,NA,NA,NA,-0.000482123,NA,Sox2,Sox2_Intergenic_downstream,3,34747740,34747789,34747788,34747789,50,-,ACAAAGCCCCTGGGAGAACTCGGGCAAGCTGAACACCTTGGTCAAACACG,Distal Intergenic,3,34650405,34652461,2057,1,Sox2-201,97384,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,9,62,20674,ENSMUSG00000074637,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA14,
cg04724146,0.273476912,NA,NA,NA,1.284429824,NA,Hoxd3,Hoxd3_Promoter,2,74711745,74711794,74711745,74711746,50,+,CGAGCTGTATGTGCAAAATCCGCAAGGAATTGCAGTAAATTCCTTTTTGT,Promoter (<=1kb),2,74711927,74748271,36345,1,Hoxd3-203,-133,Hoxd3-203;Hoxd4-203;Hoxd8-203;Hoxd8-201;Hoxd8-202,Hoxd3;Hoxd4;Hoxd8;Hoxd8;Hoxd8,0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,7,24,15434,ENSMUSG00000079277,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg04750593,-0.171719813,NA,NA,NA,NA,NA,Metap1,Metap1_Exon,3,138489273,138489322,138489273,138489274,50,-,CGAGCCCTGGATGCCCAGCTTGATGCAAGTGGGACACTGGAGCTTGGCCT,Promoter (<=1kb),3,138458956,138489515,30560,2,Metap1-201,193,Metap1-201;Metap1-203;Metap1-204,Metap1;Metap1;Metap1,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,4,75624,ENSMUSG00000005813,conserved gene and region,3,138488909,138489274,366,*,366,49,0.770491803,0.902112676,0.133879781,2.10E-44,CpGisland,TRUE,,
cg04765298,-0.045620958,NA,NA,NA,NA,NA,Cdc73,Cdc73_Exon,1,143702495,143702544,143702543,143702544,50,+,CCCAAACAACATAGTTGGTCTTCACATTCTTGGGCCAGGAGAACTCCCCG,Promoter (<=1kb),1,143598800,143702893,104094,2,Cdc73-201,349,Cdc73-201;Cdc73-206;Cdc73-202,Cdc73;Cdc73;Cdc73,0;0;-295,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,214498,ENSMUSG00000026361,conserved gene and region,1,143702543,143703176,634,*,634,100,0.750788644,1.150155108,0.157728707,9.56E-99,CpGisland,TRUE,PromF4,
cg04795810,NA,-0.025925755,NA,NA,NA,NA,Gm11679,Gm11679_Intergenic_downstream,11,111914062,111914111,111914062,111914063,50,+,CGGCTCTGAAATTTGATTCAGGCACCAGATTATGAATAGATTTAACTAGT,Distal Intergenic,11,112042800,112043578,779,2,Gm11679-201,129467,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,7,100504331,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies3,
cg04796803,0.000881218,NA,NA,NA,NA,NA,Macrod1,Macrod1_Intron,19,7143782,7143831,7143782,7143783,50,+,CGTGATCGCCAGATTACTCCAAATGCATTTATTACAGGGGTTAGAAGCGG,"Intron (Macrod1-201/Macrod1, intron 3 of 10)",19,7056810,7198057,141248,1,Macrod1-201,86972,Macrod1-201,Macrod1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,11,11,107227,ENSMUSG00000036278,conserved gene and region,19,7143705,7143789,85,*,85,8,0.611764706,1.011904762,0.094117647,3.48E-06,CpGisland,TRUE,BivProm1,
cg04801716,-0.65689167,NA,NA,NA,NA,NA,Cbx6,Cbx6_fiveUTR,15,79834186,79834235,79834186,79834187,50,+,CGCTCGCCCACTGCAGACAGCTCCATCTTGCTCAGCGGCACCCACAGCCC,Promoter (<=1kb),15,79827837,79834226,6390,2,Cbx6-201,0,Cbx6-203;Cbx6-208;Cbx6-202;Cbx6-201;Cbx6-206;Cbx6-207;Cbx6-204;Cbx6-205;Npcd-201;Npcd-202,Cbx6;Cbx6;Cbx6;Cbx6;Cbx6;Cbx6;Cbx6;Cbx6;Npcd;Npcd,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,4,494448,ENSMUSG00000089715,conserved gene but different region,15,79834018,79834527,510,*,510,64,0.733333333,0.933638444,0.125490196,9.09E-56,CpGisland,TRUE,TSS1,
cg04808014,NA,NA,NA,NA,-0.905416742,NA,Cdk12,Cdk12_Intergenic_downstream,11,98284376,98284425,98284376,98284377,50,+,CGAATTGCCATCTCCTTGAGCTCTCTGTGGAGCAATCTCAGAGAGCAGTA,Distal Intergenic,11,98263502,98268011,4510,1,Cdk12-204,20874,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,17,25,69131,ENSMUSG00000003119,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhA19,
cg04812757,NA,NA,0.347872455,NA,NA,NA,Defb41,Defb41_Intergenic_upstream,1,18308020,18308069,18308020,18308021,50,+,CGACTCCAGATTTCAGACTACATAGCCTGGCAGTTTTCTACAAGAACCAA,Distal Intergenic,1,18250980,18265138,14159,2,Defb41-201,-42882,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,6,6,77673,ENSMUSG00000067773,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA15,
cg04845649,NA,0.109753818,0.159120743,0.314796802,NA,NA,Hsf4,Hsf4_Exon,8,105270585,105270634,105270585,105270586,50,+,CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAGCT,Promoter (<=1kb),8,105269801,105275686,5886,1,Hsf4-205,784,Fbxl8-201;Fbxl8-202;Hsf4-205;Hsf4-201;Hsf4-202;Hsf4-204;Hsf4-203;Hsf4-207;Hsf4-206,Fbxl8;Fbxl8;Hsf4;Hsf4;Hsf4;Hsf4;Hsf4;Hsf4;Hsf4,5937;5903;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,26386,ENSMUSG00000033249,conserved gene but different region,8,105270477,105270586,110,*,110,9,0.590909091,0.9375,0.081818182,2.05E-06,CpGisland,TRUE,BivProm2,
cg04860548,NA,NA,NA,NA,0.460452174,NA,Cerkl,Cerkl_Promoter,2,79456957,79457006,79457005,79457006,50,-,TTTGTGGCCAGAAGAAAGTGGCCCATCTGTCGCCAGTTAGAGACTCCGCG,Promoter (<=1kb),2,79338569,79456785,118217,2,Cerkl-210,-221,Cerkl-210;Neurod1-201,Cerkl;Neurod1,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,15,228094,ENSMUSG00000075256,mapped to different genes,2,79456843,79457022,180,*,180,14,0.622222222,0.830039526,0.077777778,1.72E-09,CpGisland,TRUE,BivProm2,
cg04908805,0.138308588,NA,NA,NA,NA,NA,Gas1,Gas1_Intergenic_downstream,13,60173744,60173793,60173792,60173793,50,-,TGTATCAGCACTCGACACAGCTTAAGAGTGTAATTATTTATCTAAGGGCG,Distal Intergenic,13,60175787,60176941,1155,2,Gas1-202,3197,Gas1-201;Gas1-202,Gas1;Gas1,3572;3148,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,7,10,14451,ENSMUSG00000052957,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg04929868,NA,NA,0.088888146,NA,NA,NA,Hnrnpdl,Hnrnpdl_threeUTR,5,100035684,100035733,100035684,100035685,50,-,CGACCCCCAGAGATAGACGTGGTCAGGGTGACACACGGCCTGCAATGAAG,Promoter (<=1kb),5,100033577,100036068,2492,2,Hnrnpdl-203,335,Enoph1-202;Enoph1-201;Enoph1-203;Hnrnpdl-203;Hnrnpdl-202;Hnrnpdl-207;Hnrnpdl-201;Hnrnpdl-204;Hnrnpdl-205;Hnrnpdl-206,Enoph1;Enoph1;Enoph1;Hnrnpdl;Hnrnpdl;Hnrnpdl;Hnrnpdl;Hnrnpdl;Hnrnpdl;Hnrnpdl,0;0;0;0;0;0;0;0;0;1390,TRUE,FALSE,TRUE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,8,8,50926,ENSMUSG00000029328,conserved gene and region,5,100035645,100035745,101,*,101,9,0.613861386,0.945889698,0.089108911,1.00E-06,CpGisland,TRUE,TxEx1,
cg04958293,NA,NA,-0.13072809,NA,NA,NA,Cask,Cask_threeUTR,X,13522053,13522102,13522101,13522102,50,+,CACTACAACTAGGTAGTCTCTAGGGACCATGACCTGCTGACACAAGGCCG,3' UTR,20,13517080,13786030,268951,2,Cask-212,263928,Cask-212;Cask-203;Cask-204;Cask-201;Cask-202;Cask-207,Cask;Cask;Cask;Cask;Cask;Cask,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,3,9,12361,ENSMUSG00000031012,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg04998737,0.421426439,NA,NA,NA,NA,NA,Otp,Otp_Promoter,13,94869015,94869064,94869063,94869064,50,+,GCTCTTCAATGCTGATTATTTTATTTGCAGCCATAATTATATTTCTTTCG,Promoter (6-7kb),13,94875602,94885130,9529,1,Otp-201,-6538,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene and region,13,94869063,94869234,172,*,172,30,0.819767442,1.155913978,0.174418605,1.73E-31,CpGisland,TRUE,BivProm1,
cg05004092,NA,NA,NA,NA,0.466196204,NA,Zfp618,Zfp618_Intron,4,63075669,63075718,63075669,63075670,50,+,CGACACAAATAGAATAGATTATGGAGTGTCAGCATGTAGATAGATTCCGA,"Intron (Zfp618-201/Zfp618, intron 3 of 11)",4,62965573,63115748,150176,1,Zfp618-201,110096,Zfp618-201;Zfp618-203;Zfp618-202,Zfp618;Zfp618;Zfp618,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,12,72701,ENSMUSG00000028358,conserved gene and region,,,,,,,,,,,,,TRUE,Tx2,
cg05033071,-0.074667384,NA,NA,NA,NA,NA,Foxo6,Foxo6_Exon,4,120286859,120286908,120286907,120286908,50,-,TGCTGTCGCCTTTATCCTTGAAGTAGGGCACGTAACGGACCATCCAGTCG,Promoter (<=1kb),4,120267079,120287349,20271,2,Foxo6-201,441,Foxo6-201,Foxo6,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,42,329934,ENSMUSG00000052135,conserved gene and region,4,120286820,120288190,1371,*,1371,160,0.728665208,0.879452187,0.116703136,1.00E-132,CpGisland,TRUE,BivProm1,
cg05052045,NA,-0.256643616,NA,NA,NA,NA,Cadm1,Cadm1_Intron,9,47533571,47533620,47533619,47533620,50,-,AATATCCCTCATTAATGCCACTTTATATTTACAGTGTGTCACTGGAGACG,"Intron (Cadm1-204/Cadm1, intron 1 of 9)",9,47530173,47853385,323213,1,Cadm1-204,3398,Cadm1-204;Cadm1-209;Cadm1-206;Cadm1-202;Cadm1-203;Cadm1-207;Cadm1-205;Cadm1-211;Cadm1-210;Cadm1-208;Cadm1-201,Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1;Cadm1,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,39,77,54725,ENSMUSG00000032076,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg05108018,NA,NA,NA,NA,0.429286931,NA,Pax2,Pax2_Intergenic_upstream,19,44726466,44726515,44726466,44726467,50,+,CGGTGCGGAAGAATACAAAAAAATTTCATTGAGGAGGATTATAAAAGTTA,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-29530,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg05109804,NA,0.006381515,NA,NA,NA,NA,Arglu1,Arglu1_Exon,8,8683740,8683789,8683788,8683789,50,-,AGCGTTACCTCTCTAGCTTTTTGTGCGGCAAGCTCAGCTTGTCTCTGTCG,"Exon (Arglu1-201/Arglu1, exon 2 of 4)",8,8665075,8690521,25447,2,Arglu1-201,6732,Arglu1-201;Arglu1-204;Arglu1-203;Arglu1-202,Arglu1;Arglu1;Arglu1;Arglu1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,7,234023,ENSMUSG00000040459,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg05111574,NA,NA,NA,NA,-0.160341178,0.182386734,Mllt3,Mllt3_Intron,4,88030440,88030489,88030488,88030489,50,+,CCAATAAAGATTACGGATCAAATGGAAGATAACTACTAACCATTGTGTCG,"Intron (Mllt3-201/Mllt3, intron 2 of 10)",4,87769925,88033364,263440,2,Mllt3-201,2875,Mllt3-201;Mllt3-203;Mllt3-205;Mllt3-206,Mllt3;Mllt3;Mllt3;Mllt3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,8,13,70122,ENSMUSG00000028496,conserved gene and region,,,,,,,,,,,,,TRUE,PromF7,
cg05134912,NA,NA,NA,-0.133411734,NA,NA,Wdr7,Wdr7_Intron,18,63894273,63894322,63894273,63894274,50,+,CGCTGACTCTAATGTGACATGTTTATTGCCTTAACTAACAACTCATTAGC,"Intron (Wdr7-201/Wdr7, intron 21 of 27)",18,63708685,63989776,281092,1,Wdr7-201,185588,Gm19076-201;Wdr7-201;Wdr7-204,Gm19076;Wdr7;Wdr7,4709;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,8,11,104082,ENSMUSG00000040560,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA15,
cg05141984,NA,NA,NA,NA,-0.767041699,NA,Ebf2,Ebf2_Intron,14,67261940,67261989,67261940,67261941,50,+,CGGGGAGGGATAGAGTCATTAGGTGTGCACTGTGTTTAATATTTGGTCAT,"Intron (Ebf2-201/Ebf2, intron 7 of 16)",14,67233292,67429777,196486,1,Ebf2-201,28648,Ebf2-201;Ebf2-203;Ebf2-202,Ebf2;Ebf2;Ebf2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,20,21,13592,ENSMUSG00000022053,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC9,
cg05163400,NA,2.190662476,NA,NA,NA,NA,Cpeb2,Cpeb2_threeUTR,5,43286241,43286290,43286241,43286242,50,+,CGTAGGGGCAACACAGTCTGCTGCTATATAGTGGGGGAAGCGTGCACTTA,3' UTR,5,43233170,43289723,56554,1,Cpeb2-204,53071,Cpeb2-204;Cpeb2-201;Cpeb2-205,Cpeb2;Cpeb2;Cpeb2,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,5,11,231207,ENSMUSG00000039782,mapped to different genes,,,,,,,,,,,,,TRUE,Tx6,
cg05165194,NA,0.143149612,NA,NA,NA,NA,Gm17304,Gm17304_Intron,5,106560748,106560797,106560796,106560797,50,+,GCTGCTCGCTCCATGATGAGATGCTAAATGAAAAGCTGGTGCGACACACG,"Intron (Gm28050-202/Gm28050-202, intron 1 of 2)",5,106609098,106609201,104,1,Gm17304-201,-48301,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,35,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg05166871,-0.267745135,NA,NA,NA,NA,NA,Skap1,Skap1_Intron,11,96736234,96736283,96736234,96736235,50,-,CGCAGAATTCAAGTTTGAATAGAGCAGGGAAAAGGTGTTTGAAAGGCCTG,"Intron (Skap1-204/Skap1, intron 11 of 12)",11,96464593,96758941,294349,1,Skap1-204,271641,Skap1-204;Skap1-203;Skap1-209;Skap1-201,Skap1;Skap1;Skap1;Skap1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,40,46,78473,ENSMUSG00000057058,conserved gene and region,11,96736098,96736244,147,*,147,12,0.585034014,0.962356792,0.081632653,1.97E-08,CpGisland,TRUE,BivProm3,
cg05170536,NA,-0.015540675,NA,NA,NA,NA,Prdm16,Prdm16_Intron,4,154581737,154581786,154581737,154581738,50,-,CGCAGAAGAGTGCAAAGATTTGTCTTTAGAAAGCACAGTGCTGAAATCTA,"Intron (Prdm16-201/Prdm16, intron 1 of 16)",4,154316125,154636866,320742,2,Prdm16-201,55080,Prdm16-201;Prdm16-202;Prdm16-203;Prdm16-204;Prdm16-205;Prdm16-206;Prdm16-210;Prdm16-207;Prdm16-212,Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16;Prdm16,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,32,70673,ENSMUSG00000039410,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg05191959,NA,NA,NA,NA,-19.26920373,-3.552708224,Pou2f2,Pou2f2_Promoter,7,25179896,25179945,25179896,25179897,50,-,CGCGAGCCCAGGCGCGCGCCATCCCCGGCTCCCACCTTGTCCCCATGGCA,Promoter (<=1kb),7,25120618,25179726,59109,2,Pou2f2-208,-219,Pou2f2-208,Pou2f2,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,11,29,18987,ENSMUSG00000008496,conserved gene but different region,7,25179573,25180057,485,*,485,61,0.771134021,0.853947179,0.125773196,3.02E-53,CpGisland,TRUE,BivProm1,
cg05193512,-0.536543946,NA,NA,NA,NA,NA,Tgfb2,Tgfb2_Exon,1,186706037,186706086,186706037,186706038,50,+,CGTGTCTGCCTTCAACAAAGTGACGTGCTAGGATTACAGTCAGAAGTCCT,Promoter (<=1kb),1,186622792,186705989,83198,2,Tgfb2-201,-48,Tgfb2-201;Tgfb2-206;Tgfb2-203,Tgfb2;Tgfb2;Tgfb2,0;0;-1704,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,4,21808,ENSMUSG00000039239,mapped to different genes,1,186705879,186706159,281,*,281,13,0.565836299,0.581873208,0.046263345,3.09E-06,CpGisland,TRUE,,
cg05203258,NA,NA,NA,NA,0.309639613,NA,Zfhx3,Zfhx3_Intron,8,108823057,108823106,108823057,108823058,50,+,CGAATTATGTCATGTGGTATCCCCTTTGATTTCGACATGCCTCAGTTTGT,"Intron (Zfhx3-204/Zfhx3, intron 9 of 15)",8,107942644,108961630,1018987,1,Zfhx3-204,880413,Zfhx3-204;Zfhx3-201,Zfhx3;Zfhx3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,114,177,11906,ENSMUSG00000038872,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg05203725,NA,NA,NA,0.002807508,NA,NA,Aftph,Aftph_threeUTR,11,20696800,20696849,20696848,20696849,50,-,ATCAAGGTTCAGAAGAGTGGAACCTCCACTAGCTTGAAATTCAGTGACCG,3' UTR,11,20685084,20727607,42524,2,Aftph-205,30758,Aftph-205;Aftph-201;Aftph-208;Aftph-209;Aftph-203;Aftph-207;Aftph-206,Aftph;Aftph;Aftph;Aftph;Aftph;Aftph;Aftph,0;0;0;0;-3998;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,4,216549,ENSMUSG00000049659,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg05314634,NA,NA,NA,NA,-0.679445016,NA,Hdac7,Hdac7_Intron,15,97832378,97832427,97832426,97832427,50,-,TCCCCCAGTGCATTACAGCGGATCACAGAAATGTTCCAGTCTGTGAGTCG,"Intron (Hdac7-203/Hdac7, intron 1 of 23)",15,97792666,97844502,51837,2,Hdac7-203,12075,Hdac7-201;Hdac7-203;Hdac7-202;Hdac7-206;Hdac7-204;Hdac7-205;Hdac7-207;Hdac7-213;Hdac7-212,Hdac7;Hdac7;Hdac7;Hdac7;Hdac7;Hdac7;Hdac7;Hdac7;Hdac7,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,4,6,56233,ENSMUSG00000022475,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg05322294,-0.114541779,NA,NA,NA,NA,NA,Zeb2,Zeb2_Exon,2,45113397,45113446,45113445,45113446,50,-,GGCGGAAAACGGTGCACACCATTCACAGAACTGGAGAACTCCAAGGGGCG,"Exon (Zeb2os-201/Zeb2os-201, exon 3 of 3)",2,44983632,45117395,133764,2,Zeb2-212,3949,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-216;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219;Zeb2-211;Zeb2-210;Zeb2-205;Zeb2-223;Zeb2-217;Zeb2-225;Zeb2-204;Zeb2-206;Zeb2-230,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-3321;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,21,158,24136,ENSMUSG00000026872,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg05474883,0.735704208,NA,NA,NA,NA,NA,Hnrnpd,Hnrnpd_threeUTR,5,99962081,99962130,99962129,99962130,50,+,GTTGGAAGAGACCATACCAAACGGCAGCATTCGAGAGCGTGAGCATCTCG,3' UTR,5,99955935,99978938,23004,2,Hnrnpd-211,16808,Hnrnpd-211;Hnrnpd-201;Hnrnpd-203;Hnrnpd-202;Hnrnpd-208;Hnrnpd-209;Hnrnpd-204;Hnrnpd-205;Hnrnpd-206;Hnrnpd-210,Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd;Hnrnpd,0;0;0;0;0;0;0;0;4257;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,6,8,11991,ENSMUSG00000000568,conserved gene and region,5,99962102,99962210,109,*,109,11,0.614678899,1.07437276,0.100917431,9.65E-09,CpGisland,TRUE,TxEx1,
cg05478327,NA,NA,0.216551457,NA,NA,NA,0610010K14Rik,0610010K14Rik_Intergenic_downstream,11,70234238,70234287,70234286,70234287,50,+,TGCCTTTGGCCTCCATCTTGTGGCAGGCCCAGGGCCCAGGGCGACTTCCG,Downstream (<1kb),11,70235206,70236196,991,2,0610010K14Rik-211,1909,0610010K14Rik-211;0610010K14Rik-210;0610010K14Rik-205;0610010K14Rik-209;0610010K14Rik-202;0610010K14Rik-204;0610010K14Rik-208;0610010K14Rik-207;0610010K14Rik-203;0610010K14Rik-213;0610010K14Rik-212;0610010K14Rik-206;0610010K14Rik-201;0610010K14Rik-214;Bcl6b-201;Bcl6b-203;Bcl6b-202;Gm21988-201;Gm21988-202;Rnasek-202;Rnasek-201;Rnasek-203,0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;0610010K14Rik;Bcl6b;Bcl6b;Bcl6b;Gm21988;Gm21988;Rnasek;Rnasek;Rnasek,1909;0;0;0;0;0;0;0;0;0;0;0;0;0;-4499;-4561;-4440;0;0;5493;5555;4771,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,3,9,104457,ENSMUSG00000020831,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA1,
cg05482254,NA,NA,-0.029953806,NA,NA,NA,Tiparp,Tiparp_Intron,3,65533714,65533763,65533714,65533715,50,+,CGATGTTGTGTTTCCTGGCAACAAGATGCAGATAACGGCATGTTGAGCCT,"Intron (Tiparp-201/Tiparp, intron 2 of 5)",3,65528410,65555518,27109,1,Tiparp-201,5304,4931440P22Rik-203;4931440P22Rik-204;4931440P22Rik-201;Tiparp-201;Tiparp-202,4931440P22Rik;4931440P22Rik;4931440P22Rik;Tiparp;Tiparp,-4343;-4501;-4335;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,99929,ENSMUSG00000034640,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg05484434,NA,-0.303009415,NA,NA,NA,NA,Erbb4,Erbb4_Intron,1,69105087,69105136,69105135,69105136,50,+,CGTTTCCTTAATTTGTTTCATCTAAAAGCAATTCACTCAACATCTTGTCG,"Intron (Erbb4-201/Erbb4, intron 1 of 27)",1,68032186,69107756,1075571,2,Erbb4-201,2620,Erbb4-201;Erbb4-202;Erbb4-205,Erbb4;Erbb4;Erbb4,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,10,13,13869,ENSMUSG00000062209,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg05506474,NA,-0.00375836,NA,NA,NA,NA,Fam222b,Fam222b_fiveUTR,11,78153789,78153838,78153837,78153838,50,+,ATAAAAATCTTCCCCAACAGTGTGAAGGTTCCCCAGCGGAAACACGTTCG,5' UTR,11,78094660,78156700,62041,1,Fam222b-201,59129,Fam222b-201;Fam222b-202;Fam222b-203;Gm12571-201;Traf4-203,Fam222b;Fam222b;Fam222b;Gm12571;Traf4,0;0;0;-4351;11751,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,10,21,216971,ENSMUSG00000037750,conserved gene and region,11,78153825,78153900,76,*,76,9,0.631578947,1.266666667,0.118421053,8.12E-08,CpGisland,TRUE,TxEnh4,
cg05513929,NA,0.351270304,NA,NA,NA,NA,Nrxn1,Nrxn1_Exon,17,90162382,90162431,90162430,90162431,50,+,TTCCCGCCAATTATTATGGTTGCTTGGCTATTGAAGATTGTGAGCTGACG,"Exon (Nrxn1-202/Nrxn1, exon 19 of 21)",17,90033631,91088907,1055277,2,Nrxn1-202,926476,Nrxn1-202;Nrxn1-207;Nrxn1-216;Nrxn1-204;Nrxn1-217;Nrxn1-209;Nrxn1-201;Nrxn1-213;Nrxn1-206;Nrxn1-223;Nrxn1-219,Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1;Nrxn1,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,22,27,18189,ENSMUSG00000024109,conserved gene but different region,,,,,,,,,,,,,TRUE,Quies2,
cg05543238,-1.494304964,NA,NA,NA,NA,NA,Gtf2a1,Gtf2a1_Intron,12,91588411,91588460,91588411,91588412,50,-,CGGTGACGTAGGCCTGAAAAGCACCTTCCCATCCTGGCAGAGTCTATATT,"Intron (Gtf2a1-201/Gtf2a1, intron 1 of 8)",12,91555262,91590009,34748,2,Gtf2a1-201,1549,Gtf2a1-201;Gtf2a1-202;Gtf2a1-203,Gtf2a1;Gtf2a1;Gtf2a1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,83602,ENSMUSG00000020962,conserved gene and region,12,91588219,91588418,200,*,200,19,0.605,1.046831956,0.095,2.29E-14,CpGisland,TRUE,PromF4,
cg05589845,NA,NA,0.573510673,NA,1.136681784,NA,Evx1,Evx1_fiveUTR,6,52313611,52313660,52313659,52313660,50,-,GAAGAGGGCAATGGGGCTTCCTCCCAGAGGCGGTGCGGCACAGAGGAGCG,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,113,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,7,19,14028,ENSMUSG00000005503,mapped to different genes,6,52313641,52313750,110,*,110,14,0.709090909,1.023255814,0.127272727,1.54E-12,CpGisland,TRUE,,
cg05601676,NA,NA,NA,NA,-0.433425521,NA,Nkx2-3,Nkx2-3_Intergenic_downstream,19,43616700,43616749,43616700,43616701,50,-,CGAGCTCCCCATTGCTTCTCAGAGCGGGGGCTTTGTGCAGCAGTCTGCTC,Downstream (<1kb),19,43612325,43615892,3568,1,Nkx2-3-201,4424,Nkx2-3-201,Nkx2-3,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,5,6,18089,ENSMUSG00000044220,conserved gene and region,19,43616270,43616905,636,*,636,57,0.682389937,0.781074268,0.089622642,1.32E-40,CpGisland,TRUE,BivProm2,
cg05703789,-0.492136388,NA,NA,NA,NA,NA,Kmt5b,Kmt5b_threeUTR,19,3807266,3807315,3807266,3807267,50,+,CGCCTGCTCCTGTTATCAATAGCAAATATGGACTCAGAGAAACAGATAAA,3' UTR,19,3767421,3808829,41409,1,Kmt5b-202,39845,Kmt5b-202;Kmt5b-205;Kmt5b-207;Kmt5b-206;Kmt5b-208;Kmt5b-203;Kmt5b-204;Kmt5b-201;Kmt5b-221;Kmt5b-210;Kmt5b-213;Kmt5b-216;Kmt5b-219;Kmt5b-220;Kmt5b-218;Kmt5b-212,Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b;Kmt5b,0;0;0;0;0;0;0;0;0;0;0;0;0;5193;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,3,225888,ENSMUSG00000045098,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg05759182,-0.062013302,NA,NA,NA,NA,NA,Sfswap,Sfswap_Exon,5,129501543,129501592,129501591,129501592,50,+,ACAGGGACAGCACCTCATCCCCTGGATGGGGGACCACAAGATCCTCATCG,Promoter (<=1kb),5,129501221,129571384,70164,1,Sfswap-201,322,Sfswap-201;Sfswap-204;Sfswap-212;Sfswap-213;Sfswap-214;Sfswap-208;Sfswap-203;Sfswap-215,Sfswap;Sfswap;Sfswap;Sfswap;Sfswap;Sfswap;Sfswap;Sfswap,0;0;0;0;0;0;0;-2749,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,5,231769,ENSMUSG00000029439,conserved gene and region,5,129501591,129502227,637,*,637,65,0.681318681,0.879367102,0.102040816,4.10E-50,CpGisland,TRUE,PromF4,
cg05781245,0.050267016,NA,NA,NA,NA,NA,Ube2o,Ube2o_Exon,11,116545075,116545124,116545075,116545076,50,+,CGCAGTTTTTTTCTGGACATTCCCAGGCAATCTTGGCTGGCTCTACCTTG,"Exon (Ube2o-201/Ube2o, exon 8 of 18)",11,116537740,116581447,43708,2,Ube2o-201,36323,Ube2o-202;Ube2o-201;Ube2o-203,Ube2o;Ube2o;Ube2o,-1058;0;3717,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,217342,ENSMUSG00000020802,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg05798256,NA,NA,NA,NA,0.003457808,NA,Pax6,Pax6_Exon,2,105683872,105683921,105683872,105683873,50,+,CGGCCACTGCCGGACTCCACCCGGCAGAAGATTGTAGAGCTAGCTCACAG,"Exon (Pax6-206/Pax6, exon 4 of 13)",2,105668900,105697364,28465,1,Pax6-206,14972,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-209;Pax6-216,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,31,78,18508,ENSMUSG00000027168,conserved gene but different region,2,105683814,105684069,256,*,256,19,0.62109375,0.818855219,0.07421875,2.40E-12,CpGisland,TRUE,ReprPC1,
cg05809127,NA,NA,-0.697501132,NA,NA,NA,Rbm39,Rbm39_threeUTR,2,156167673,156167722,156167721,156167722,50,+,ATGTTTAAAAACCTTAATTTGATGCTATGAGGCAACCCAATCTTTCCTCG,3' UTR,2,156147239,156180238,33000,2,Rbm39-203,12516,Rbm39-203;Rbm39-217;Rbm39-215;Rbm39-201;Rbm39-225;Rbm39-223;Rbm39-220;Rbm39-204;Rbm39-209;Rbm39-207;Rbm39-206;Rbm39-216;Rbm39-221;Rbm39-213;Rbm39-214,Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39,0;0;0;0;0;0;-2750;0;-2461;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,11,13,170791,ENSMUSG00000027620,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg05811474,NA,NA,NA,NA,0.086865716,NA,Tfap2a,Tfap2a_Intergenic_downstream,13,40709078,40709127,40709126,40709127,50,+,ATTGAAATGGCGTGTGCCAGGGCTGATGGGAGCCAGCGAGGGACAAAGCG,Distal Intergenic,13,40716724,40728944,12221,2,Tfap2a-209,19817,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,15,57,21418,ENSMUSG00000021359,mapped to different genes,13,40709088,40709361,274,*,274,22,0.653284672,0.763037975,0.080291971,5.99E-15,CpGisland,TRUE,BivProm2,
cg05825073,NA,NA,0.345484698,NA,NA,NA,Evx1,Evx1_fiveUTR,6,52313452,52313501,52313452,52313453,50,+,CGAGGCCCACACCTGGCGCATCACTGCCGAGCCATTAGCTGCGGGTTTCC,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,0,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,19,14028,ENSMUSG00000005503,mapped to different genes,6,52313448,52313581,134,*,134,12,0.574626866,1.093877551,0.089552239,6.76E-09,CpGisland,TRUE,BivProm1,
cg05850818,NA,NA,NA,0.086458508,NA,NA,Smg6,Smg6_Intron,11,75047385,75047434,75047433,75047434,50,+,TGCCCAGACCTTCGCATTCTGATGCTATATATCTTCCTAATTGTAGCTCG,"Intron (Smg6-201/Smg6, intron 12 of 18)",11,74925823,75164448,238626,1,Smg6-201,121562,Smg6-201;Smg6-202;Smg6-204,Smg6;Smg6;Smg6,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,34,103677,ENSMUSG00000038290,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg05874561,NA,NA,NA,NA,-0.419804442,NA,Sfrp2,Sfrp2_Exon,3,83766700,83766749,83766700,83766701,50,-,CGAATACCAGAACATGCGGCTGCCCAACCTGCTGGGCCACGAGACCATGA,Promoter (<=1kb),3,83766321,83774316,7996,1,Sfrp2-201,379,Sfrp2-201;Sfrp2-202;Sfrp2-203,Sfrp2;Sfrp2;Sfrp2,0;0;-104,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,4,20319,ENSMUSG00000027996,conserved gene and region,3,83766337,83767061,725,*,725,73,0.686896552,0.872888904,0.100689655,9.57E-56,CpGisland,TRUE,BivProm1,
cg05895577,NA,NA,0.296116324,NA,NA,NA,Bclaf1,Bclaf1_Intron,10,20327093,20327142,20327093,20327094,50,+,CGATCTGAACAGCTCTTACTTTATATAGAGCTGAAAATGCCCAGTGATGT,"Intron (Bclaf1-202/Bclaf1, intron 6 of 11)",10,20312469,20342501,30033,1,Bclaf1-202,14624,Bclaf1-202;Bclaf1-204;Bclaf1-201;Bclaf1-205;Bclaf1-208;Bclaf1-203;Bclaf1-210;Bclaf1-207;Bclaf1-209,Bclaf1;Bclaf1;Bclaf1;Bclaf1;Bclaf1;Bclaf1;Bclaf1;Bclaf1;Bclaf1,0;0;0;14565;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,7,72567,ENSMUSG00000037608,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg05933505,-0.239681014,-0.14219284,-0.265140852,-0.280201443,NA,NA,Wasf2,Wasf2_Exon,4,133176484,133176533,133176532,133176533,50,-,TGCCGTTAGTAACGAGGAACATCGAGCCAAGGCACCTGTGCCGTCAGACG,"Exon (Wasf2-201/Wasf2, exon 2 of 9)",4,133130505,133199756,69252,1,Wasf2-201,45979,Wasf2-201;Wasf2-206;Wasf2-204;Wasf2-203;Wasf2-202,Wasf2;Wasf2;Wasf2;Wasf2;Wasf2,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,5,242687,ENSMUSG00000028868,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg05934936,NA,NA,NA,NA,-0.381426499,NA,Zeb2,Zeb2_threeUTR,2,45097134,45097183,45097182,45097183,50,+,AAAACCCTGAAACTGATGAACAGTTATGTCAAGTCGATTTTGCACCATCG,3' UTR,2,44983632,45117395,133764,2,Zeb2-212,20212,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-216;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219;Zeb2-211,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,10,158,24136,ENSMUSG00000026872,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhA1,
cg05960393,NA,NA,NA,NA,0.202755086,NA,Lmx1b,Lmx1b_Intron,2,33616842,33616891,33616890,33616891,50,+,AGATAAAATGATTAAAAACTGCCAAGCGGGCCTGGCAATCACTCGCTCCG,"Intron (Lmx1b-201/Lmx1b, intron 2 of 7)",2,33560965,33640608,79644,2,Lmx1b-201,23717,Lmx1b-201;Lmx1b-203;Lmx1b-204;Lmx1b-202,Lmx1b;Lmx1b;Lmx1b;Lmx1b,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,18,26,16917,ENSMUSG00000038765,conserved gene and region,2,33616825,33617025,201,*,201,14,0.606965174,0.75624832,0.069651741,7.35E-09,CpGisland,TRUE,BivProm2,
cg05977669,NA,NA,NA,NA,1.592910987,NA,Hoxa11,Hoxa11_Exon,6,52245979,52246028,52246027,52246028,50,+,TTGTAGCCACCTCAGGGGAAGCAACAGATCGTCACTCGGTGTTCTCACCG,Promoter (<=1kb),6,52242106,52245810,3705,2,Hoxa11-201,-169,Hoxa11-201;Hoxa11-202,Hoxa11;Hoxa11,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,18,15396,ENSMUSG00000038210,mapped to different genes,6,52246008,52246200,193,*,193,16,0.658031088,0.771614193,0.082901554,3.24E-11,CpGisland,TRUE,BivProm1,
cg06001099,NA,NA,NA,NA,-0.007306688,NA,Cacnb3,Cacnb3_Exon,15,98643383,98643432,98643383,98643384,50,+,CGCCACCTGGAGGAGGACTATGCAGATGCCTACCAGGACCTGTACCAGCC,"Exon (Cacnb3-202/Cacnb3, exon 13 of 13)",15,98632376,98644529,12154,1,Cacnb3-202,11007,Cacnb3-203;Cacnb3-207;Cacnb3-202;Cacnb3-201;Cacnb3-206;Cacnb3-205;Ddx23-201;Ddx23-204;Ddx23-203,Cacnb3;Cacnb3;Cacnb3;Cacnb3;Cacnb3;Cacnb3;Ddx23;Ddx23;Ddx23,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,3,12297,ENSMUSG00000003352,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx3,
cg06045699,NA,NA,NA,NA,-0.114998472,NA,Hoxa2,Hoxa2_fiveUTR,6,52164814,52164863,52164814,52164815,50,+,CGCTACTATTAAACTATTGAATTCATGGAGACAAGGTTGAAATTGGACCG,Promoter (<=1kb),6,52162417,52164831,2415,2,Hoxa2-201,0,Gm28308-201;Hoxa2-201;Hoxa3-201,Gm28308;Hoxa2;Hoxa3,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,3,15399,ENSMUSG00000014704,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg06129152,0.090715037,NA,NA,NA,NA,NA,Gm18602,Gm18602_Intron,8,87214989,87215038,87215037,87215038,50,+,TGTACACGCAAAATTAACACAAATCAAAACTGCTGCTGTTCTTTGATCCG,"Intron (Gm27169-201/Gm27169-201, intron 1 of 4)",8,87051397,87052247,851,2,Gm18602-201,-162742,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,2,100417420,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC4,
cg06156376,1.897343859,NA,NA,NA,NA,NA,Rsrc1,Rsrc1_fiveUTR,3,66981509,66981558,66981557,66981558,50,-,CACTTTCTGGTCAAAAGACTTGGAGACGAACGCCGTAAGTTCTTCCATCG,Promoter (<=1kb),3,66981390,67356559,375170,1,Rsrc1-206,119,Rsrc1-206;Rsrc1-207;Rsrc1-203;Rsrc1-208;Rsrc1-202;Rsrc1-201;Rsrc1-209;Rsrc1-205;Rsrc1-204;Shox2-203;Shox2-201;Shox2-202;Shox2-204;Shox2-205,Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Shox2;Shox2;Shox2;Shox2;Shox2,0;-4112;0;0;0;0;0;0;-4420;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,37,66880,ENSMUSG00000034544,conserved gene and region,3,66981535,66981613,79,*,79,13,0.708860759,1.426388889,0.164556962,2.70E-13,CpGisland,TRUE,BivProm1,
cg06198114,NA,-0.402939578,NA,NA,NA,NA,Mapkap1,Mapkap1_Intron,2,34453490,34453539,34453490,34453491,50,+,CGCTGTCTTTCCTGACAGCAGTTAAAAAGTATGGTTATAGTAATCAAATT,"Intron (Mapkap1-210/Mapkap1, intron 4 of 4)",2,34406771,34497716,90946,1,Mapkap1-210,46719,Mapkap1-210;Mapkap1-204;Mapkap1-211;Mapkap1-202;Mapkap1-201;Mapkap1-209;Mapkap1-203;Mapkap1-207;Mapkap1-206,Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,50,59,227743,ENSMUSG00000038696,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA9,
cg06202504,NA,0.133166647,NA,NA,NA,NA,Nrxn3,Nrxn3_Intron,12,89352682,89352731,89352730,89352731,50,-,TTTGCTCCCACTTTTCTGTTGCGGTTGACGACACATGACAAACCTAACCG,"Intron (Nrxn3-213/Nrxn3, intron 6 of 18)",12,88722986,90332878,1609893,1,Nrxn3-213,629696,Nrxn3-213;Nrxn3-208;Nrxn3-205;Nrxn3-201;Nrxn3-210,Nrxn3;Nrxn3;Nrxn3;Nrxn3;Nrxn3,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,39,18191,ENSMUSG00000066392,conserved gene and region,,,,,,,,,,,,,TRUE,Quies1,
cg06230736,1.009268298,NA,NA,NA,NA,NA,Gata3,Gata3_fiveUTR,2,9878542,9878591,9878590,9878591,50,-,ATGCATTCTTTCTGAAAGTATCAAGACGGCGCCAGGCAGCTCAGTGTTCG,Promoter (<=1kb),2,9857078,9878600,21523,2,Gata3-201,9,4930412O13Rik-201;4930412O13Rik-202;9230102O04Rik-202;9230102O04Rik-201;Gata3-201;Gata3-205;Gata3-206;Gata3-202;Gata3-204;Gata3-203,4930412O13Rik;4930412O13Rik;9230102O04Rik;9230102O04Rik;Gata3;Gata3;Gata3;Gata3;Gata3;Gata3,-2661;-4045;10949;5402;0;0;-3143;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,5,21,14462,ENSMUSG00000015619,conserved gene and region,2,9878568,9878714,147,*,147,12,0.639455782,0.804377565,0.081632653,1.97E-08,CpGisland,TRUE,,
cg06237677,NA,0.154974848,NA,NA,NA,NA,Gm6877,Gm6877_Intergenic_downstream,8,33138987,33139036,33138987,33138988,50,-,CGTTCCCACTGGCATCTGTAAATTAGCCTCTGGTAATTATCTGTGTGGGA,Distal Intergenic,8,33191196,33192296,1101,2,Gm6877-201,53309,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,1,628412,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA5,
cg06245192,NA,-0.183596913,NA,-0.200948543,NA,NA,Sox21,Sox21_Intergenic_downstream,14,118194473,118194522,118194473,118194474,50,+,CGTGAAATTAAATGTTTGACAGAGTGAGAAAAATATACAGACTTTGGAGA,Distal Intergenic,14,118233232,118237030,3799,2,Sox21-201,42508,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,26,27,223227,ENSMUSG00000061517,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg06358839,-0.455760689,NA,NA,NA,NA,NA,Nr2f2,Nr2f2_Intergenic_downstream,7,70346524,70346573,70346524,70346525,50,-,CGCTGGGAGCAATAAGTCCATTTAAAAGCCCTTTATTTAAAAGGAACAAA,Distal Intergenic,7,70353074,70355237,2164,2,Nr2f2-203,8713,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,19,69,11819,ENSMUSG00000030551,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg06363348,0.039309434,NA,NA,NA,NA,NA,Grm8,Grm8_Exon,6,28125645,28125694,28125693,28125694,50,-,TGATGGACACGGAGCTTGCTGCAGCACCTATGACGCCAGAAATCTTGTCG,"Exon (Grm8-202/Grm8, exon 2 of 11)",6,27275119,28134545,859427,2,Grm8-202,8851,Grm8-202;Grm8-203;Grm8-201;Grm8-204;Grm8-206;Grm8-205,Grm8;Grm8;Grm8;Grm8;Grm8;Grm8,0;0;0;0;0;7435,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,14823,ENSMUSG00000024211,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC5,
cg06438063,NA,-0.097426853,NA,NA,NA,NA,Bicd1,Bicd1_threeUTR,6,149520507,149520556,149520507,149520508,50,+,CGGCTCAGCAAGGAAAAAAGGTTAACCGTGGCTCCACCAGGTAAACATTT,3' UTR,6,149408984,149563329,154346,1,Bicd1-202,111523,Bicd1-202;Bicd1-203;Bicd1-201;Bicd1-207;Bicd1-208;Bicd1-206,Bicd1;Bicd1;Bicd1;Bicd1;Bicd1;Bicd1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,6,12121,ENSMUSG00000003452,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg06454786,NA,NA,NA,NA,-0.304471894,NA,Cntln,Cntln_Intron,4,84988091,84988140,84988091,84988092,50,-,CGTAGCTTTCTTGTCAGTTTTTAATAATTACAGGCTATTATGGAATGCAT,"Intron (Cntln-201/Cntln, intron 8 of 25)",4,84884309,85131921,247613,1,Cntln-201,103782,Cntln-201;Cntln-204,Cntln;Cntln,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,25,338349,ENSMUSG00000038070,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg06475639,NA,NA,0.865316842,NA,NA,NA,Mtmr3,Mtmr3_threeUTR,11,4481084,4481133,4481132,4481133,50,-,TAAGAGCTGCAAGCATTTATTCACACTGTACATCAGACCCAAGAAACCCG,3' UTR,11,4480868,4594815,113948,2,Mtmr3-202,113682,Mtmr3-202;Mtmr3-207;Mtmr3-201;Mtmr3-203;Mtmr3-205;Mtmr3-204,Mtmr3;Mtmr3;Mtmr3;Mtmr3;Mtmr3;Mtmr3,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,4,74302,ENSMUSG00000034354,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh4,
cg06537244,-0.211495807,NA,NA,NA,NA,NA,Zfr,Zfr_fiveUTR,15,12117871,12117920,12117871,12117872,50,+,CGGGTGAGAGTTCAGAGTTCAGCAGCAGCAGCCCGAGCCCATGATTCCCA,Promoter (<=1kb),15,12117831,12185683,67853,1,Zfr-201,40,Zfr-201;Zfr-210;Zfr-203;Zfr-204;Zfr-202,Zfr;Zfr;Zfr;Zfr;Zfr,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,12,22763,ENSMUSG00000022201,conserved gene and region,15,12117482,12117905,424,*,424,42,0.672169811,0.880886427,0.099056604,5.28E-32,CpGisland,TRUE,TSS1,
cg06540073,NA,NA,0.148304511,NA,NA,NA,Atxn7l1,Atxn7l1_Intron,12,33345227,33345276,33345275,33345276,50,+,CAGTAAATTGTATTTATAGGCACTCACAGGCGGTTCTAAAGCCTGCTACG,"Intron (Atxn7l1-212/Atxn7l1, intron 6 of 12)",12,33147754,33373030,225277,1,Atxn7l1-212,197473,Atxn7l1-212;Atxn7l1-204;Atxn7l1-202;Atxn7l1-207;Atxn7l1-213;Atxn7l1-205,Atxn7l1;Atxn7l1;Atxn7l1;Atxn7l1;Atxn7l1;Atxn7l1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,24,380753,ENSMUSG00000020564,conserved gene and region,12,33345257,33345411,155,*,155,14,0.64516129,0.885352917,0.090322581,2.25E-10,CpGisland,TRUE,,
cg06545110,-0.120642669,-0.578258498,NA,NA,NA,NA,Dysf,Dysf_Intron,6,84135176,84135225,84135176,84135177,50,+,CGAGCTTGGAGCTGATGGTATCACAGCCAGACGGTTTCATTAAATGCACA,"Intron (Dysf-204/Dysf, intron 32 of 54)",6,84008590,84211060,202471,1,Dysf-204,126586,Dysf-204;Dysf-205;Dysf-213;Dysf-215;Dysf-210;Dysf-211;Dysf-212;Dysf-214;Dysf-216;Dysf-202;Dysf-203;Dysf-201,Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf,0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,26903,ENSMUSG00000033788,conserved gene and region,6,84135100,84135232,133,*,133,10,0.526315789,1.089271089,0.07518797,9.42E-07,CpGisland,TRUE,EnhWk2,
cg06570740,-0.059827764,NA,NA,NA,NA,NA,Spen,Spen_Exon,4,141522036,141522085,141522084,141522085,50,-,TACAAAATACCTGCCTACAGAAACCTTGGAACTTACCCATCAAGTCTCCG,"Exon (Spen-201/Spen, exon 2 of 15)",4,141467890,141538449,70560,2,Spen-201,16364,Spen-201;Spen-202;Spen-205,Spen;Spen;Spen,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,17,19,56381,ENSMUSG00000040761,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg06590610,NA,NA,NA,0.28803024,NA,NA,Ikzf1,Ikzf1_Exon,11,11748397,11748446,11748397,11748398,50,+,CGAATGCTTGATGCCTCGGGAGAGAAAATGAATGGCTCCCACAGGGACCA,"Exon (Ikzf1-203/Ikzf1, exon 5 of 9)",11,11685003,11754083,69081,1,Ikzf1-205,63394,Ikzf1-205;Ikzf1-203;Ikzf1-204;Ikzf1-202;Ikzf1-201,Ikzf1;Ikzf1;Ikzf1;Ikzf1;Ikzf1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,15,22778,ENSMUSG00000018654,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh6,
cg06603975,NA,NA,NA,NA,0.606859065,NA,Dlx1,Dlx1_fiveUTR,2,71528278,71528327,71528278,71528279,50,+,CGTATGAAAATTAAACATCAGTGTTATGCTAATGGGGCGCCTTCAGCTGC,Promoter (<=1kb),2,71528113,71533980,5868,1,Dlx1-201,165,Dlx1-201;Dlx1-202;Dlx1-205;Dlx1-204;Dlx1-203;Dlx1-206;Metap1d-201;Metap1d-205;Metap1d-203,Dlx1;Dlx1;Dlx1;Dlx1;Dlx1;Dlx1;Metap1d;Metap1d;Metap1d,0;0;0;0;0;-2453;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,12,36,13390,ENSMUSG00000041911,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm2,
cg06606386,NA,NA,NA,NA,0.373797319,NA,Nanos3,Nanos3_Exon,8,84208522,84208571,84208522,84208523,50,+,CGGCTGGGGTTCCTGGGGATGGGATTTGCTTCCTGTCACAAATCACATTG,"Exon (Mir23a-201/Mir23a-201, exon 1 of 1)",8,84173731,84185217,11487,2,Nanos3-203,-23305,Zswim4-201,Zswim4,28484,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,244551,ENSMUSG00000056155,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx4,
cg06620993,NA,NA,NA,NA,-0.509334231,NA,Sh3pxd2a,Sh3pxd2a_Exon,19,47314077,47314126,47314125,47314126,50,+,GGAGGCTCAGCTCCGAGTTCTCCTGCTTCTTATAGTTGGACACCACCACG,"Exon (Sh3pxd2a-201/Sh3pxd2a, exon 8 of 15)",19,47260174,47464401,204228,2,Sh3pxd2a-201,150275,Sh3pxd2a-201;Sh3pxd2a-203;Sh3pxd2a-202,Sh3pxd2a;Sh3pxd2a;Sh3pxd2a,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,6,14218,ENSMUSG00000053617,conserved gene and region,19,47313990,47314398,409,*,409,35,0.682151589,0.735838388,0.085574572,1.92E-24,CpGisland,TRUE,PromF2,
cg06637963,-0.384005452,NA,NA,NA,NA,NA,Zeb1,Zeb1_fiveUTR,18,5591886,5591935,5591934,5591935,50,+,CATTTAGACACAAGCGAGAGGATCATGGCGGATGGCCCCAGGTGTAAGCG,Promoter (<=1kb),18,5591891,5766533,174643,1,Zeb1-202,0,Zeb1-212;Zeb1-201;Zeb1-204;Zeb1-202;Zeb1-209;Zeb1-206;Zeb1-208;Zeb1-205;Zeb1-211;Zeb1-207,Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,7,21417,ENSMUSG00000024238,mapped to different genes,18,5591882,5592967,1086,*,1086,159,0.745856354,1.076353436,0.14640884,2.52E-150,CpGisland,TRUE,TSS2,
cg06699148,-0.833293223,NA,NA,NA,NA,NA,Son,Son_Exon,16,91656381,91656430,91656381,91656382,50,-,CGACGACAGCGCTGGAATCCTATAATACGGTAGCACAGGAGCTGCCTACT,"Exon (Son-203/Son, exon 3 of 12)",16,91647506,91679207,31702,1,Son-203,8875,Son-203;Son-204;Son-202;Son-208;Son-201;Son-205;Son-212,Son;Son;Son;Son;Son;Son;Son,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,31,20658,ENSMUSG00000022961,conserved gene and region,16,91656231,91656409,179,*,179,11,0.603351955,0.686780607,0.061452514,1.61E-06,CpGisland,TRUE,TxEx1,
cg06706916,NA,NA,NA,NA,0.708909641,NA,Rfx7,Rfx7_Exon,9,72611687,72611736,72611687,72611688,50,-,CGTCTTGTGTGTGAGTGGGCCCAGAAAGTGTTAAGCCAACCATTTGACAC,"Exon (Rfx7-202/Rfx7, exon 7 of 9)",9,72532240,72622829,90590,1,Rfx7-202,79447,Gm18014-201;Rfx7-202;Rfx7-201;Rfx7-203;Rfx7-205;Rfx7-204,Gm18014;Rfx7;Rfx7;Rfx7;Rfx7;Rfx7,-4490;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,8,319758,ENSMUSG00000037674,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg06772109,NA,NA,-0.007659816,NA,NA,NA,Mecom,Mecom_Intron,3,30514107,30514156,30514155,30514156,50,-,CCTTTCAGGGAGGTAATCAATCAAGTGATCAACAGGGATATTTATCATCG,"Intron (Mecom-208/Mecom, intron 2 of 8)",3,29977344,30548008,570665,2,Mecom-208,33852,Mecom-212;Mecom-213;Mecom-207;Mecom-208;Mecom-211;Mecom-209,Mecom;Mecom;Mecom;Mecom;Mecom;Mecom,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,57,80,14013,ENSMUSG00000027684,conserved gene but different region,3,30514155,30514288,134,*,134,12,0.582089552,1.148571429,0.089552239,6.76E-09,CpGisland,TRUE,BivProm2,
cg06778009,NA,0.366093612,NA,NA,NA,NA,Tesk2,Tesk2_threeUTR,4,116805636,116805685,116805684,116805685,50,-,TGGTACAGGAACACCAAGTCTATAAGGCCATTGTGTAGCACCAGGGGCCG,3' UTR,4,116720969,116805956,84988,1,Tesk2-203,84667,Mutyh-201;Mutyh-203;Mutyh-202;Mutyh-206;Tesk2-201;Tesk2-203;Tesk2-202;Tesk2-204;Toe1-202;Toe1-201;Toe1-208;Toe1-207;Toe1-204;Toe1-203;Toe1-206;Toe1-205,Mutyh;Mutyh;Mutyh;Mutyh;Tesk2;Tesk2;Tesk2;Tesk2;Toe1;Toe1;Toe1;Toe1;Toe1;Toe1;Toe1;Toe1,-2038;-2040;-2053;-2063;84688;0;63953;33873;0;0;-444;-31;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,230661,ENSMUSG00000033985,mapped to different genes,4,116805684,116805723,40,*,40,6,0.625,1.538461538,0.15,7.52E-06,CpGisland,TRUE,,
cg06779064,NA,-1.206207974,NA,NA,NA,NA,Tnrc6a,Tnrc6a_Exon,7,123188796,123188845,123188844,123188845,50,-,TCATCCTTGAACACCACGCTGCCTTCAACTAGTGCCTGGTCATCCATTCG,"Exon (Tnrc6a-201/Tnrc6a, exon 20 of 24)",7,123124177,123193987,69811,1,Tnrc6a-203,64619,Tnrc6a-203;Tnrc6a-201;Tnrc6a-205;Tnrc6a-208,Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,17,24,233833,ENSMUSG00000052707,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg06785707,NA,NA,NA,NA,0.193895994,NA,Ntrk3,Ntrk3_Exon,7,78577640,78577689,78577640,78577641,50,+,CGGCCGCCGGCAATTGATCTCAGTCTTGCTGCAGACACAATTTGCAGGGC,Promoter (<=1kb),7,78175959,78578408,402450,2,Ntrk3-201,719,Ntrk3-201;Ntrk3-206;Ntrk3-205;Ntrk3-202;Ntrk3-204;Ntrk3-210;Ntrk3-214;Ntrk3-212;Ntrk3-220;Ntrk3-218,Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3;Ntrk3,0;0;0;0;0;0;0;0;1009;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,15,18213,ENSMUSG00000059146,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg06795598,0.003955918,NA,NA,NA,NA,NA,Fnbp4,Fnbp4_Exon,2,90758303,90758352,90758303,90758304,50,+,CGAGCCTTGGAGGAAGGAGATGGTAGTGTGTCAGGGTCTAGTCCACGTTC,"Exon (Fnbp4-201/Fnbp4, exon 8 of 17)",2,90745370,90781021,35652,1,Fnbp4-201,12933,Fnbp4-201;Fnbp4-210;Fnbp4-202;Fnbp4-204;Fnbp4-209;Fnbp4-208,Fnbp4;Fnbp4;Fnbp4;Fnbp4;Fnbp4;Fnbp4,0;0;0;5731;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,6,55935,ENSMUSG00000008200,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg06810228,NA,NA,0.14723525,NA,NA,NA,Gm13471,Gm13471_Intergenic_upstream,2,47334560,47334609,47334560,47334561,50,-,CGTAAATGACTAAGCAAGAGATAACAAAATTACATCTGCACTTGTTTGGC,Distal Intergenic,2,48140146,48140578,433,1,Gm13471-201,-805586,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,9,10,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA5,
cg06810447,-0.133759803,NA,NA,NA,NA,NA,Speg,Speg_Exon,1,75385075,75385124,75385123,75385124,50,+,CTGGGGGTCAGAGGATAGCCTTTCCGTGGCCAGTGACCTGTACGGCAGCG,"Exon (Speg-201/Speg, exon 3 of 41)",1,75375297,75432320,57024,1,Speg-201,9778,Speg-201;Speg-214;Speg-205;Speg-215;Speg-208;Speg-213;Speg-207;Speg-210;Speg-209;Speg-211,Speg;Speg;Speg;Speg;Speg;Speg;Speg;Speg;Speg;Speg,0;0;0;0;0;0;0;0;-388;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,9,11790,ENSMUSG00000026207,conserved gene and region,1,75384919,75385180,262,*,262,21,0.675572519,0.714545455,0.080152672,2.82E-14,CpGisland,TRUE,TxEnh7,
cg06811295,NA,NA,NA,NA,-0.853451474,NA,Fgfr2,Fgfr2_Intron,7,131552426,131552475,131552474,131552475,50,+,CTGACACCATGATTAAAGCTGACCATTTGTAATGTGTCTCGACCCTGCCG,"Intron (Hmx2-202/Hmx2, intron 1 of 2)",7,130162451,133123350,2960900,2,Fgfr2-217,1570875,Fgfr2-217;Hmx2-202;Hmx2-201,Fgfr2;Hmx2;Hmx2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,58,79,14183,ENSMUSG00000030849,mapped to different genes,7,131552465,131552790,326,*,326,26,0.641104294,0.778328742,0.079754601,1.69E-17,CpGisland,TRUE,ReprPC1,
cg06839075,NA,NA,NA,NA,0.327932663,NA,Pax6,Pax6_Exon,2,105684910,105684959,105684958,105684959,50,-,AATTCTGGGCAGGTATTACGAGACTGGCTCCATCAGACCCAGGGCAATCG,"Exon (Pax6-206/Pax6, exon 6 of 13)",2,105668900,105697364,28465,1,Pax6-206,16010,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-209;Pax6-216,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,31,78,18508,ENSMUSG00000027168,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC1,
cg06868293,NA,NA,NA,NA,0.58542797,NA,Scn2a,Scn2a_Exon,2,65682082,65682131,65682082,65682083,50,+,CGGGATCCATGGAATTGGTTGGATTTCACAGTCATTACTTTTGCGTAAGT,"Exon (Scn2a-204/Scn2a, exon 5 of 11)",2,65620771,65690175,69405,1,Scn2a-204,61311,Scn2a-204;Scn2a-201;Scn2a-205;Scn2a-202;Scn2a-203;Scn2a-210,Scn2a;Scn2a;Scn2a;Scn2a;Scn2a;Scn2a,0;0;0;0;-149;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,5,110876,ENSMUSG00000075318,conserved gene but different region,,,,,,,,,,,,,TRUE,Quies3,
cg06878766,NA,NA,0.820845046,NA,NA,NA,Plag1,Plag1_Promoter,4,3937770,3937819,3937818,3937819,50,+,TGAATTTATATTAATTTTTCCCTTATTTTTCGGGTCTCTAATGTCTTCCG,Promoter (<=1kb),4,3900996,3938382,37387,2,Plag1-201,563,Chchd7-202;Chchd7-206;Chchd7-213;Chchd7-207;Chchd7-208;Chchd7-201;Chchd7-205;Chchd7-214;Chchd7-203;Chchd7-209;Chchd7-210;Chchd7-211;Chchd7-204;Plag1-201;Plag1-202;Plag1-204;Plag1-203,Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Chchd7;Plag1;Plag1;Plag1;Plag1,-1069;-1069;-1071;-1095;-1095;-1095;-1095;-1095;-1101;-1224;-1603;-1681;-3035;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,8,22,56711,ENSMUSG00000003282,conserved gene and region,4,3937683,3937840,158,*,158,13,0.537974684,1.156531532,0.082278481,3.81E-09,CpGisland,TRUE,PromF5,
cg06889609,-0.312986897,NA,NA,NA,NA,NA,Rab8a,Rab8a_fiveUTR,8,72161352,72161401,72161400,72161401,50,-,GTGTAATATGGCGAAGACCTACGATTACCTGTTCAAGCTGCTGCTGATCG,Promoter (<=1kb),8,72161359,72176057,14699,1,Rab8a-202,0,Rab8a-201;Rab8a-203;Rab8a-202,Rab8a;Rab8a;Rab8a,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,5,17274,ENSMUSG00000003037,conserved gene but different region,8,72161136,72161662,527,*,527,47,0.669829222,0.805967721,0.089184061,1.73E-33,CpGisland,TRUE,PromF4,
cg06921573,NA,NA,NA,NA,0.167026361,NA,Dmrta2,Dmrta2_Promoter,4,109977972,109978021,109978020,109978021,50,-,ATTGTTGTCCAATTCTGTCTAATGGAGCCCTAAGGACCAACAATAGAGCG,Promoter (<=1kb),4,109978053,109983687,5635,1,Dmrta2-201,-81,Dmrta2-201,Dmrta2,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,7,13,242620,ENSMUSG00000047143,conserved gene and region,4,109978020,109978412,393,*,393,43,0.745547074,0.816140249,0.109414758,9.23E-35,CpGisland,TRUE,,
cg06970066,NA,NA,0.031673133,NA,NA,NA,Tenm4,Tenm4_Exon,7,96702637,96702686,96702637,96702638,50,+,CGTAGAAACCTAGGCAAGCAGCCATTCCTAGGGACATTGCAGGACAACCT,"Exon (Tenm4-201/Tenm4, exon 9 of 33)",7,96171246,96908569,737324,1,Tenm4-201,531391,Tenm4-201;Tenm4-203;Tenm4-202;Tenm4-207,Tenm4;Tenm4;Tenm4;Tenm4,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,17,26,23966,ENSMUSG00000048078,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg06974979,NA,0.017246393,NA,NA,NA,NA,Gm12074,Gm12074_Intergenic_upstream,11,26962293,26962342,26962293,26962294,50,-,CGCCGTTTTATGCATGCAGCGTAATGTCTTTACTTGAAGTGCTGTTTATT,Distal Intergenic,11,27051697,27051915,219,1,Gm12074-201,-89404,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,10,10,100042367,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg07005811,-0.350758433,NA,-1.36508154,NA,NA,NA,Phf12,Phf12_Exon,11,78023640,78023689,78023688,78023689,50,-,ACACCAGCACTTTGCAAAGAAAGACTGTCCAATCACAGATAGGACCTCCG,"Exon (Phf12-202/Phf12, exon 9 of 11)",11,77982754,78026214,43461,1,Phf12-202,40886,Phf12-202;Phf12-201;Phf12-207;Phf12-206;Phf12-208;Phf12-205;Phf12-203;Phf12-204,Phf12;Phf12;Phf12;Phf12;Phf12;Phf12;Phf12;Phf12,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,14,27,268448,ENSMUSG00000037791,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg07117595,NA,NA,-0.030468158,NA,NA,NA,Fhl1,Fhl1_Exon,X,56791262,56791311,56791310,56791311,50,+,AGCCACCCAGTCTCTAAAGCTAGGAAGCCCCCAGTGTGCCACGGGAAACG,"Exon (Fhl1-203/Fhl1, exon 7 of 8)",20,56731787,56793346,61560,1,Fhl1-201,59475,Fhl1-201;Fhl1-203;Fhl1-206;Fhl1-205;Fhl1-204;Fhl1-202;Fhl1-210;Fhl1-207;Fhl1-208;Fhl1-209,Fhl1;Fhl1;Fhl1;Fhl1;Fhl1;Fhl1;Fhl1;Fhl1;Fhl1;Fhl1,0;0;0;0;0;0;11443;0;3537;3264,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,11,14199,ENSMUSG00000023092,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA1,
cg07117806,NA,-0.020963921,NA,NA,NA,NA,Runx2,Runx2_threeUTR,17,44658626,44658675,44658626,44658627,50,-,CGCCCTAAATCACTGAGGCGGTCAGAGAACAAACTAGGTTTAGAGTCATC,3' UTR,17,44495987,44736176,240190,2,Runx2-212,77501,Runx2-212;Runx2-214;Runx2-203;Runx2-202;Runx2-213;Runx2-204;Runx2-210;Runx2-211;Runx2-207;Runx2-201;Runx2-209;Runx2-205;Runx2-206,Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2;Runx2,0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,10,20,12393,ENSMUSG00000039153,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg07159253,NA,NA,NA,NA,1.075915386,NA,Uncx,Uncx_Promoter,5,139539266,139539315,139539266,139539267,50,+,CGGATTTCCCGGGGGAGTAGAGTAAATTAGTTCCATTTCCGAACTGCCTC,Promoter (4-5kb),5,139543494,139548179,4686,1,Uncx-201,-4179,Uncx-201;Uncx-202,Uncx;Uncx,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,22,88,22255,ENSMUSG00000029546,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg07172031,NA,NA,-0.032120049,NA,NA,NA,Arih1,Arih1_Exon,9,59436847,59436896,59436847,59436848,50,+,CGAGACTTTTTACTTGGATTAATTACATGACACTCAGCAAAGAGCTTCTC,"Exon (Arih1-207/Arih1, exon 3 of 14)",9,59388258,59486614,98357,2,Arih1-207,49718,Arih1-207;Arih1-201;Arih1-202;Arih1-204;Arih1-205,Arih1;Arih1;Arih1;Arih1;Arih1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,13,23806,ENSMUSG00000025234,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg07211487,NA,0.343564812,NA,NA,NA,NA,Elavl2,Elavl2_threeUTR,4,91251942,91251991,91251990,91251991,50,-,ACACAAGGTCTTATTTACATTACACAAAGCTCAGGTGTTAGCCTTGAACG,3' UTR,4,91250763,91372034,121272,2,Elavl2-204,120043,Elavl2-204;Elavl2-201;Elavl2-207;Elavl2-208;Elavl2-202;Elavl2-209;Elavl2-210;Elavl2-206;Elavl2-203;Elavl2-205,Elavl2;Elavl2;Elavl2;Elavl2;Elavl2;Elavl2;Elavl2;Elavl2;Elavl2;Elavl2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,6,31,15569,ENSMUSG00000008489,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg07221240,0.472643611,NA,NA,NA,NA,NA,Syne1,Syne1_Exon,10,5194628,5194677,5194628,5194629,50,-,CGATCTGCTCCTGGTAGCCCTTAATTTTCTGCGCCAGCTCCTGAGGAAAC,"Exon (Syne1-205/Syne1, exon 91 of 146)",10,5020917,5550678,529762,2,Syne1-205,356001,Syne1-205;Syne1-206,Syne1;Syne1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,2,64009,ENSMUSG00000096054,conserved gene and region,10,5194500,5194689,190,*,190,11,0.552631579,0.766691123,0.057894737,2.85E-06,CpGisland,TRUE,PromF4,
cg07230616,NA,-0.094726626,NA,-0.360175773,NA,NA,Ube2q1,Ube2q1_Exon,3,89781788,89781837,89781836,89781837,50,-,AAGAGCACAGCAGTCCTACAAGTCCTTGGTGCAGATCCACGAAAAAAACG,"Exon (Ube2q1-201/Ube2q1, exon 12 of 13)",3,89773616,89784000,10385,1,Ube2q1-201,8172,AC102392.1-201;Ube2q1-201;Ube2q1-203;Ube2q1-202,AC102392.1;Ube2q1;Ube2q1;Ube2q1,4473;0;7928;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,6,70093,ENSMUSG00000042572,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg07238438,NA,NA,NA,NA,2.014616282,NA,Gm9006,Gm9006_Intergenic_downstream,12,107692738,107692787,107692738,107692739,50,+,CGGGCTCCCCTGCCTAGAAGCCAAGGCCGATTAATATCTGCCTACCTTGT,Distal Intergenic,12,107613000,107613840,841,1,Gm9006-201,79738,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,4,108167974,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC4,
cg07275860,-0.058168592,NA,NA,NA,NA,NA,Rab35,Rab35_fiveUTR,5,115631982,115632031,115632030,115632031,50,+,GGAGGTGTTTCTGTCAGTTCCGGCTGTTTGTTCGGGAAGTGGATCCGCCG,Promoter (<=1kb),5,115631908,115647736,15829,1,Rab35-201,74,Rab35-201;Rab35-202,Rab35;Rab35,0;-110,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,2,77407,ENSMUSG00000029518,conserved gene and region,5,115631432,115632564,1133,*,1133,156,0.747572816,1.000860722,0.137687555,1.78E-142,CpGisland,TRUE,TSS1,
cg07279255,NA,NA,1.778231826,0.774517776,1.75262594,0.395026499,En1,En1_Promoter,1,120602318,120602367,120602318,120602319,50,+,CGGCCCTGACTCACGTGCTTCCGGTTTGAAGGCAAAAAGTGTGCCTGGGT,Promoter (<=1kb),1,120602418,120607992,5575,1,En1-201,-51,En1-201,En1,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,23,36,13798,ENSMUSG00000058665,conserved gene and region,1,120602094,120602340,247,*,247,23,0.668016194,0.838400236,0.093117409,4.24E-17,CpGisland,TRUE,BivProm2,
cg07311313,NA,NA,NA,NA,0.145655398,NA,Cdx2,Cdx2_Promoter,5,147307283,147307332,147307331,147307332,50,+,TGTTTACAAGACTCTATTAGTAATGACACAGACACCAATGGTTGGAGACG,Promoter (<=1kb),5,147300805,147307270,6466,2,Cdx2-201,-13,Cdx2-201,Cdx2,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,3,7,12591,ENSMUSG00000029646,conserved gene and region,5,147307331,147307436,106,*,106,9,0.632075472,0.851785714,0.08490566,1.50E-06,CpGisland,TRUE,BivProm2,
cg07322285,NA,NA,NA,NA,-0.151264737,NA,Pou3f3,Pou3f3_Promoter,1,42695565,42695614,42695613,42695614,50,-,AGATTTCCAGCTTCTACGACGCTCTGCCTAAATTAAAAAGCAACCAATCG,Promoter (<=1kb),1,42694925,42703176,8252,1,Pou3f3-202,640,Pou3f3-202;Pou3f3-201,Pou3f3;Pou3f3,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,37,18993,ENSMUSG00000045515,conserved gene and region,1,42695391,42695839,449,*,449,33,0.634743875,0.816633598,0.073496659,6.76E-21,CpGisland,TRUE,BivProm1,
cg07322750,NA,NA,NA,NA,-0.637406537,NA,Helt,Helt_fiveUTR,8,46294630,46294679,46294678,46294679,50,-,CTGTCCAGAGTCATTAAAGTAATTAAGTAAGCCTTTAATAGGCTGTTCCG,Promoter (<=1kb),8,46292039,46294671,2633,2,Helt-201,0,Helt-201;Helt-202;Helt-203,Helt;Helt;Helt,0;-641;-1295,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,22,234219,ENSMUSG00000047171,conserved gene but different region,8,46294678,46294897,220,*,220,21,0.65,0.923630548,0.095454545,6.99E-16,CpGisland,TRUE,BivProm2,
cg07351279,NA,0.009315876,NA,NA,NA,NA,Sox5,Sox5_Intron,6,144166213,144166262,144166261,144166262,50,+,TTTCCCCCTTCTCAAGGGAGGCATTGTTCTTGCCTTTCCATAACCAGGCG,"Intron (Sox5-201/Sox5, intron 1 of 14)",6,143828425,144209480,381056,2,Sox5-201,43218,Sox5-201;Sox5-214;Sox5-205;Sox5-202;Sox5-209;Sox5-207;Sox5-210;Sox5-212;Sox5-208;Sox5-213,Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,61,71,20678,ENSMUSG00000041540,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg07379873,0.245395569,NA,NA,NA,NA,NA,Srsf11,Srsf11_threeUTR,3,158023301,158023350,158023349,158023350,50,+,GGTGTGCTCTCAACTTTCAAAAGCTGTTTTATGAACAACGACTCGTGTCG,3' UTR,3,158010473,158036639,26167,2,Srsf11-204,13289,Srsf11-204;Srsf11-213;Srsf11-202;Srsf11-207;Srsf11-201;Srsf11-217;Srsf11-218;Srsf11-206;Srsf11-209;Srsf11-210;Srsf11-212;Srsf11-203;Srsf11-208;Srsf11-215,Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11,0;0;0;-161;0;-1297;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,6,8,69207,ENSMUSG00000055436,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx7,
cg07428697,-0.393043704,NA,NA,NA,NA,NA,Ccdc71l,Ccdc71l_Exon,12,32379192,32379241,32379192,32379193,50,+,CGGAGCTCTGGAGCTTCCTCTGCAGCCTCAAGCACCAGTTCTCCCCGCAC,Promoter (<=1kb),12,32378704,32382943,4240,1,Ccdc71l-201,488,Ccdc71l-201,Ccdc71l,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,72123,ENSMUSG00000090946,conserved gene and region,12,32378735,32379193,459,*,459,65,0.745098039,1.042598546,0.1416122,1.24E-60,CpGisland,TRUE,PromF4,
cg07437635,NA,0.245729276,NA,NA,NA,NA,Bcl11a,Bcl11a_Exon,11,24163680,24163729,24163728,24163729,50,-,GGTTACTGCAACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGCGACG,"Exon (Bcl11a-201/Bcl11a, exon 4 of 5)",11,24078056,24173194,95139,1,Bcl11a-201,85624,Bcl11a-201;Bcl11a-203;Bcl11a-202;Bcl11a-204;Bcl11a-206,Bcl11a;Bcl11a;Bcl11a;Bcl11a;Bcl11a,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,51,98,14025,ENSMUSG00000000861,conserved gene and region,11,24163725,24163848,124,*,124,9,0.612903226,0.894230769,0.072580645,5.47E-06,CpGisland,TRUE,Tx5,
cg07440346,-0.573898595,-0.009241655,-0.62549393,NA,NA,NA,Ypel3,Ypel3_fiveUTR,7,126777809,126777858,126777809,126777810,50,+,CGTGGGGCCACTGCCCCCGGCCCCCGCCATGGTGCGGATTTCAAAGCCCA,Promoter (<=1kb),7,126776955,126780514,3560,1,Ypel3-201,854,Gdpd3-201;Gdpd3-203;Tbx6-202;Tbx6-201;Ypel3-201;Ypel3-210;Ypel3-204;Ypel3-209;Ypel3-211;Ypel3-203;Ypel3-207;Ypel3-205;Ypel3-202;Ypel3-208;Ypel3-206,Gdpd3;Gdpd3;Tbx6;Tbx6;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3,11475;9289;-3625;-3625;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,2,4,66090,ENSMUSG00000042675,conserved gene and region,7,126777793,126777939,147,*,147,11,0.653061224,0.70952172,0.074829932,2.27E-07,CpGisland,TRUE,PromF2,
cg07451598,NA,-0.085553197,NA,NA,NA,NA,Gm49473,Gm49473_Intergenic_downstream,15,102777233,102777282,102777281,102777282,50,+,TAATTGCAATGAGGCCCTCTAGGCCGTGAATTAATGTGTCATAACTCACG,Distal Intergenic,15,102795121,102795371,251,2,Gm49473-201,18089,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,6,12,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC2,D?
cg07476673,NA,NA,0.238436803,NA,NA,NA,Dll1,Dll1_Promoter,17,15378818,15378867,15378866,15378867,50,+,TGTTTAACTTCAGCGTTTCTATAGGAGCCTGTTGTAGTTTAACTCCTGCG,Promoter (1-2kb),17,15374794,15376872,2079,2,Dll1-205,-1946,Dll1-201;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1,-2842;-4746;-3718;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg07479479,-0.56738083,NA,NA,NA,NA,NA,Tfap2b,Tfap2b_Intron,1,19231845,19231894,19231845,19231846,50,+,CGCGGTTTGTCCCGTTGACAGCGTAATTTAAAGAAATATATGGAAGGCTG,"Intron (Tfap2b-201/Tfap2b, intron 6 of 6)",1,19208914,19238576,29663,1,Tfap2b-201,22931,Tfap2b-201;Tfap2b-204;Tfap2b-202,Tfap2b;Tfap2b;Tfap2b,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,40,21419,ENSMUSG00000025927,conserved gene and region,1,19231763,19231867,105,*,105,11,0.561904762,1.336805556,0.104761905,6.39E-09,CpGisland,TRUE,ReprPC1,
cg07502389,NA,NA,NA,NA,-0.182064445,-0.150366343,Nefm,Nefm_fiveUTR,14,68124812,68124861,68124860,68124861,50,+,ATCTTGGAGGCCTTGGGGCGTGTGGCTGTCACAGCGTTCTGCCGGCCTCG,Promoter (<=1kb),14,68082590,68124846,42257,2,Nefm-202,0,Nefm-202;Nefm-201,Nefm;Nefm,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,4,18040,ENSMUSG00000022054,mapped to different genes,14,68124846,68125102,257,*,257,25,0.723735409,0.743634259,0.097276265,4.87E-19,CpGisland,TRUE,BivProm1,
cg07511181,NA,NA,NA,NA,1.033057432,NA,Slit1,Slit1_threeUTR,19,41600614,41600663,41600614,41600615,50,+,CGCGTGGTCTGGCAGATGGCATAGCCCCTCTGGACCTGGTGAAAGTCCCG,3' UTR,19,41600257,41743492,143236,2,Slit1-203,142829,Slit1-203;Slit1-201;Slit1-202;Slit1-204,Slit1;Slit1;Slit1;Slit1,0;0;0;7867,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,4,4,20562,ENSMUSG00000025020,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg07517669,NA,NA,NA,NA,NA,0.759935999,Hoxd10,Hoxd10_Exon,2,74694263,74694312,74694263,74694264,50,+,CGACAGGCAGGTCAAGATTTGGTTTCAAAACCGCCGAATGAAACTCAAGA,"Exon (Hoxd10-201/Hoxd10, exon 2 of 2)",2,74691924,74695105,3182,1,Hoxd10-201,2339,Hoxd10-201;Hoxd9-201,Hoxd10;Hoxd9,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,21,24,15430,ENSMUSG00000050368,conserved gene and region,2,74694222,74694348,127,*,127,12,0.519685039,1.400735294,0.094488189,3.59E-09,CpGisland,TRUE,,
cg07539423,0.022968175,NA,NA,NA,NA,NA,Nova2,Nova2_threeUTR,7,18964643,18964692,18964643,18964644,50,+,CGCGATAAACGCCATCTCAGCATCTGTGTCTAATGTTGTCTTTTTTGCTT,3' UTR,7,18925888,18965319,39432,1,Nova2-201,38755,Nova2-201;Nova2-202,Nova2;Nova2,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,5,384569,ENSMUSG00000030411,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC4,
cg07560681,NA,NA,NA,NA,-1.295624559,NA,Dmtf1,Dmtf1_fiveUTR,5,9161629,9161678,9161629,9161630,50,-,CGGGCACTTTGGAAGAACCAGGATGGAAGCTCCAAAAAATACCAGGATGG,Promoter (<=1kb),5,9119070,9161671,42602,2,Dmtf1-204,0,Dmtf1-201;Dmtf1-209;Dmtf1-202;Dmtf1-208;Dmtf1-214;Dmtf1-213;Dmtf1-204;Dmtf1-207;Dmtf1-215;Dmtf1-216;Dmtf1-211;Dmtf1-206;Dmtf1-218;Tmem243-202;Tmem243-204,Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Dmtf1;Tmem243;Tmem243,0;0;0;0;0;0;0;0;0;0;0;0;0;0;5896,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,11,23857,ENSMUSG00000042508,mapped to different genes,5,9161250,9161630,381,*,381,58,0.771653543,1.03338945,0.152230971,2.37E-56,CpGisland,TRUE,,
cg07564343,-0.157844872,NA,NA,NA,NA,NA,Rora,Rora_Intron,9,68655809,68655858,68655809,68655810,50,-,CGAGCGGGTTATGTAACAGGGTTAATCAGAAACACTGGAGAAAATCCCCT,"Intron (Rora-204/Rora, intron 1 of 2)",9,68653786,68664967,11182,1,Rora-204,2023,Rora-204;Rora-201;Rora-206;Rora-205,Rora;Rora;Rora;Rora,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,11,19,19883,ENSMUSG00000032238,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg07566172,-0.082167107,NA,NA,NA,NA,NA,Klf7,Klf7_Promoter,1,64121654,64121703,64121654,64121655,50,+,CGCGTGTGACCATGTAAGGTAAACAGGGGGCTCATGAAGTCACTGAGGAC,Promoter (<=1kb),1,64079103,64122282,43180,2,Klf7-203,579,Klf7-202;Klf7-201;Klf7-203,Klf7;Klf7;Klf7,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,21,93691,ENSMUSG00000025959,mapped to different genes,1,64121602,64121657,56,*,56,9,0.714285714,1.272727273,0.160714286,4.27E-09,CpGisland,TRUE,TSS2,
cg07571117,-0.126372629,NA,NA,NA,NA,NA,Fam98a,Fam98a_fiveUTR,17,75551773,75551822,75551821,75551822,50,+,CTCCATGAGGTCACACTCCATGCTACTGTGGTATTCAAATTTCCGAGTCG,Promoter (<=1kb),17,75544467,75551796,7330,2,Fam98a-203,0,Fam98a-201;Fam98a-204;Fam98a-205;Fam98a-203,Fam98a;Fam98a;Fam98a;Fam98a,0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,6,72722,ENSMUSG00000002017,conserved gene and region,17,75551816,75552006,191,*,191,22,0.659685864,1.086068752,0.115183246,1.61E-18,CpGisland,TRUE,PromF4,
cg07576552,NA,-0.218872314,NA,-0.759818983,NA,NA,Stx5a,Stx5a_Exon,19,8742288,8742337,8742288,8742289,50,-,CGCTACGGGTCTAAGAACACGGATCAGGGTGTCTACCTGGGTCTCTCAAA,Promoter (<=1kb),19,8741413,8755586,14174,1,Stx5a-218,875,1700092M07Rik-201;1700092M07Rik-202;Stx5a-218;Stx5a-213;Stx5a-203;Stx5a-219;Stx5a-205;Stx5a-201;Stx5a-209;Stx5a-212;Stx5a-202;Stx5a-206;Stx5a-208;Stx5a-211;Stx5a-207;Wdr74-202;Wdr74-201;Wdr74-203;Wdr74-204;Wdr74-207;Wdr74-205;Wdr74-206;Wdr74-208,1700092M07Rik;1700092M07Rik;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Stx5a;Wdr74;Wdr74;Wdr74;Wdr74;Wdr74;Wdr74;Wdr74;Wdr74,1570;1526;0;0;0;0;0;0;0;0;0;0;0;0;-523;0;0;0;6407;0;0;0;2620,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,56389,ENSMUSG00000010110,conserved gene and region,19,8742266,8742308,43,*,43,7,0.558139535,2.104895105,0.162790698,4.19E-07,CpGisland,TRUE,PromF4,
cg07576603,NA,NA,-0.002702459,NA,NA,NA,Sox6,Sox6_Intron,7,115766529,115766578,115766577,115766578,50,-,ACAAACAGACGGTCCTGGATTACAAGCAGCACTTGACCATTTAAATCACG,"Intron (Sox6-210/Sox6, intron 4 of 15)",7,115470872,116031047,560176,2,Sox6-210,264469,Sox6-210;Sox6-201;Sox6-202;Sox6-204;Sox6-205;Sox6-203;Sox6-212;Sox6-206;Sox6-209;Sox6-214,Sox6;Sox6;Sox6;Sox6;Sox6;Sox6;Sox6;Sox6;Sox6;Sox6,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,37,57,20679,ENSMUSG00000051910,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhWk3,
cg07601771,0.109677368,NA,NA,NA,NA,NA,Ogt,Ogt_Exon,X,101654458,101654507,101654458,101654459,50,-,CGAATGAACCCCTGTGAACGGTTGACTAGATGAGTAATCTGATTGACTGG,"Exon (Ogt-204/Ogt, exon 4 of 4)",20,101640060,101682940,42881,1,Ogt-202,14398,Ogt-202;Ogt-206;Ogt-201;Ogt-205;Ogt-204;Ogt-207;Ogt-203,Ogt;Ogt;Ogt;Ogt;Ogt;Ogt;Ogt,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,Exon,32,33,108155,ENSMUSG00000034160,conserved gene and region,X,101654404,101654477,74,*,74,8,0.608108108,1.174603175,0.108108108,1.20E-06,CpGisland,TRUE,TxEx1,
cg07617635,NA,NA,NA,NA,-0.337159724,NA,Gm48049,Gm48049_Intergenic_downstream,13,98572868,98572917,98572916,98572917,50,+,AATGAAAGAGACACCCCCTGTTTTGACAGCTGGACCAGCGGCCTGGATCG,Distal Intergenic,13,98557761,98558031,271,1,Gm48049-201,15107,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,4,NA,NA,mapped to different genes,13,98572906,98573233,328,*,328,34,0.670731707,0.924403183,0.103658537,1.01E-26,CpGisland,TRUE,BivProm1,
cg07672217,NA,NA,NA,NA,-0.625672294,NA,Wnt1,Wnt1_Exon,15,98792809,98792858,98792809,98792810,50,-,CGCGTCACCGAGCGCTGCAACTGCACCTTCCACTGGTGCTGCCACGTCAG,"Exon (Wnt1-201/Wnt1, exon 4 of 4)",15,98789857,98793837,3981,1,Wnt1-201,2952,Wnt1-201,Wnt1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,12,22408,ENSMUSG00000022997,conserved gene and region,15,98792311,98793016,706,*,706,73,0.662889518,0.946832745,0.103399433,1.17E-56,CpGisland,TRUE,BivProm1,
cg07676047,NA,NA,NA,NA,-0.35669448,0.072037049,Sox2,Sox2_Intron,3,34639991,34640040,34639991,34639992,50,+,CGCGCTGTCTTATTTACAGCCCACTGCTTGCTGTAGAGTCTTTGTTAGGA,"Intron (Sox2ot-203/Sox2ot-203, intron 3 of 3)",3,34650405,34652461,2057,1,Sox2-201,-10365,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,34,62,20674,ENSMUSG00000074637,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg07687349,NA,NA,NA,NA,-1.040914277,NA,Tbr1,Tbr1_Exon,2,61804890,61804939,61804938,61804939,50,+,TCAGTCAGATACAGACAATTTTCCTGACTCCAAGGACTCACCAGGGGACG,Promoter (<=1kb),2,61804453,61814114,9662,1,Tbr1-201,437,Psmd14-201;Psmd14-208;Psmd14-202;Tbr1-204;Tbr1-201;Tbr1-202;Tbr1-203,Psmd14;Psmd14;Psmd14;Tbr1;Tbr1;Tbr1;Tbr1,0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,24,27,21375,ENSMUSG00000035033,conserved gene and region,2,61804938,61805248,311,*,311,21,0.620578778,0.763323983,0.067524116,9.07E-13,CpGisland,TRUE,BivProm2,
cg07751402,NA,NA,NA,NA,-0.236499637,NA,Dach1,Dach1_Exon,14,98168487,98168536,98168487,98168488,50,-,CGTTGGTGCAGTCATTGTAGAGGGTCTCGAAGTCCTTCCTGGAGATGAGT,"Exon (Dach1-201/Dach1, exon 1 of 11)",14,97786853,98169543,382691,2,Dach1-201,1007,Dach1-201;Dach1-202;Dach1-203,Dach1;Dach1;Dach1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,76,13134,ENSMUSG00000055639,conserved gene and region,14,98168225,98168726,502,*,502,39,0.655378486,0.727698483,0.077689243,1.64E-25,CpGisland,TRUE,BivProm1,
cg07763739,NA,NA,-0.687054634,NA,NA,NA,Pinx1,Pinx1_Intron,14,63883970,63884019,63883970,63883971,50,-,CGGCTTGAGGGACTCTGCTAGAGAGAAACAGGCTGTTGATAAATGGTTTT,"Intron (Pinx1-201/Pinx1, intron 6 of 6)",14,63860364,63919855,59492,1,Pinx1-201,23606,Pinx1-201,Pinx1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,2,72400,ENSMUSG00000021958,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg07866534,NA,NA,0.535375803,NA,NA,NA,Lrmda,Lrmda_Intron,14,22281518,22281567,22281518,22281519,50,-,CGTAATAGTTTGCAGTTATAGCTATAGTGAGAACAGCAGGCAAGACTATA,"Intron (Lrmda-201/Lrmda, intron 2 of 6)",14,22019712,23056085,1036374,1,Lrmda-201,261806,Lrmda-201;Lrmda-204;Lrmda-203;Lrmda-206,Lrmda;Lrmda;Lrmda;Lrmda,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,157,157,76633,ENSMUSG00000063458,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg07875786,NA,NA,NA,NA,0.26174231,NA,Nr2f1,Nr2f1_Exon,13,78200391,78200440,78200391,78200392,50,-,CGAAAGGGGGATCTGCGCGAATGTCTGTATATAGTGAACTTTGACACTAC,Promoter (<=1kb),13,78188973,78199757,10785,2,Nr2f1-201,-683,Nr2f1-201;Nr2f1-205;Nr2f1-203;Nr2f1-202;Nr2f1-206,Nr2f1;Nr2f1;Nr2f1;Nr2f1;Nr2f1,0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,25,55,13865,ENSMUSG00000069171,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF5,
cg07898297,0.116562646,NA,NA,NA,0.516183508,NA,Arl4c,Arl4c_Exon,1,88701124,88701173,88701172,88701173,50,+,TCAGGATCATCTCATAGAGCTTGTCCATGCCCTCGGTGAGGCCCTCGCCG,Promoter (<=1kb),1,88673125,88701876,28752,2,Arl4c-201,703,Arl4c-201;Arl4c-203;Arl4c-202,Arl4c;Arl4c;Arl4c,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,3,320982,ENSMUSG00000049866,conserved gene and region,1,88700885,88702514,1630,*,1630,169,0.66196319,0.948725367,0.103680982,1.91E-130,CpGisland,TRUE,PromF5,
cg07921922,NA,NA,NA,NA,0.182083415,-0.023552119,Phox2b,Phox2b_Promoter,5,67098562,67098611,67098562,67098563,50,+,CGTGATAAATTCTTTCATTTGTGTAAGCAAATTTCGTTTGGTAAATACTA,Promoter (<=1kb),5,67094399,67099301,4903,2,Phox2b-201,690,Phox2b-201;Phox2b-202,Phox2b;Phox2b,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,13,28,18935,ENSMUSG00000012520,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg07933800,NA,NA,NA,NA,-0.577167448,NA,Six1,Six1_Exon,12,73045888,73045937,73045888,73045889,50,+,CGGTCTCTTTGCCTCCGGTTCTTAAACCAGTTGCTGACCTGGGTGGTGGT,"Exon (Six1-201/Six1, exon 1 of 2)",12,73041827,73047179,5353,2,Six1-201,1242,Six1-204;Six1-201;Six1-203;Six1-202,Six1;Six1;Six1;Six1,0;0;0;-597,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,18,20471,ENSMUSG00000051367,conserved gene and region,12,73045722,73046158,437,*,437,46,0.679633867,0.912400145,0.105263158,2.63E-36,CpGisland,TRUE,BivProm1,
cg07966323,0.169923102,NA,NA,NA,NA,NA,Evx1,Evx1_Intergenic_downstream,6,52321763,52321812,52321763,52321764,50,-,CGGGTCACAGATTGAATCAATTGTCCAATCTTGTGAAAGTCATATCCTTG,Distal Intergenic,6,52313552,52316644,3093,1,Evx1-202,8260,Evx1-201,Evx1,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,8,19,14028,ENSMUSG00000005503,mapped to different genes,6,52321755,52321764,10,*,10,4,0.8,2.5,0.4,5.56E-06,CpGisland,TRUE,ReprPC1,
cg07991667,NA,0.155706977,NA,NA,NA,NA,Usp35,Usp35_Exon,7,97325354,97325403,97325354,97325355,50,+,CGCCACAGCTGCGCCAGGAGCCCGCTCACCTGCTGGGCCTGCTCTAGGAA,Promoter (<=1kb),7,97309380,97325964,16585,2,Usp35-202,561,Usp35-202;Usp35-201;Usp35-205,Usp35;Usp35;Usp35,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,244144,ENSMUSG00000035713,conserved gene and region,7,97325218,97326011,794,*,794,98,0.738035264,0.911062196,0.123425693,2.78E-84,CpGisland,TRUE,,
cg08000413,NA,NA,NA,NA,1.057837248,NA,Scn1a,Scn1a_Exon,2,66351095,66351144,66351095,66351096,50,+,CGTCTTTCAATAGCCGCAAGAGATTCTCTGGTGAAGAAGTTGAAGCTGTC,"Exon (Scn1a-203/Scn1a, exon 2 of 27)",2,66270781,66410064,139284,2,Scn1a-203,58920,Scn1a-203;Scn1a-204;Scn1a-201;Scn1a-202;Scn1a-206;Scn1a-205,Scn1a;Scn1a;Scn1a;Scn1a;Scn1a;Scn1a,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,4,20265,ENSMUSG00000064329,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA16,
cg08001107,-0.181095563,NA,-0.212623634,NA,NA,NA,Lmo4,Lmo4_Exon,3,144198139,144198188,144198139,144198140,50,-,CGCTTGGTTAATTCAGAGTAACAGATCTGCCCCCAAGTGAATTGGAGGCC,"Exon (Gm43445-201/Gm43445-201, exon 1 of 1)",3,144188530,144202396,13867,2,Lmo4-203,4208,Lmo4-203;Lmo4-201;Lmo4-202;Lmo4-207;Lmo4-206;Lmo4-208;Lmo4-205;Lmo4-204,Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,18,54,16911,ENSMUSG00000028266,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF7,
cg08014701,NA,NA,NA,NA,0.414427023,NA,Grhl2,Grhl2_fiveUTR,15,37233288,37233337,37233288,37233289,50,-,CGGGCGCTCTCACACACCTTCACCTGCACAGACTTGAAAGTCCAGTTTCA,Promoter (<=1kb),15,37233036,37333647,100612,1,Grhl2-203,252,Grhl2-203;Grhl2-201;Grhl2-204,Grhl2;Grhl2;Grhl2,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,6,8,252973,ENSMUSG00000022286,conserved gene and region,15,37233199,37233293,95,*,95,10,0.642105263,1.158536585,0.105263158,3.77E-08,CpGisland,TRUE,BivProm2,
cg08022027,NA,NA,NA,-0.231280731,NA,NA,Prpf4b,Prpf4b_threeUTR,13,34903219,34903268,34903219,34903220,50,-,CGCCTTCTCCAAGGGGTCTGATTTGCTGAGACACCAGCTTCACCTTCTTA,3' UTR,13,34875302,34906064,30763,1,Prpf4b-201,27917,Prpf4b-201;Prpf4b-208;Prpf4b-202;Prpf4b-203;Prpf4b-210;Prpf4b-207;Prpf4b-204;Prpf4b-205;Prpf4b-209,Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b,0;0;0;11095;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,4,4,19134,ENSMUSG00000021413,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx2,
cg08026135,0.194055882,NA,NA,NA,NA,NA,Chd4,Chd4_Exon,6,125120268,125120317,125120316,125120317,50,-,GAGAAATTGCTGCGGCACCATTATGAGCAGCAGCAAGAAGATCTAGCCCG,"Exon (Chd4-203/Chd4, exon 26 of 39)",6,125095981,125130585,34605,1,Chd4-203,24287,Chd4-203;Chd4-201;Chd4-202;Chd4-204;Chd4-205,Chd4;Chd4;Chd4;Chd4;Chd4,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,9,15,107932,ENSMUSG00000063870,conserved gene but different region,6,125120280,125120502,223,*,223,12,0.596412556,0.612918003,0.053811659,1.82E-06,CpGisland,TRUE,TxEx2,
cg08030302,NA,0.111847652,NA,NA,NA,NA,Pcdh9,Pcdh9_Exon,14,93888254,93888303,93888254,93888255,50,+,CGGCTGTTGATCAAAGTGTTTTCTGGAATGGAAATATTGATGACAGGAGA,"Exon (Pcdh9-208/Pcdh9, exon 2 of 5)",14,93013410,93890669,877260,2,Pcdh9-208,2366,Pcdh9-208;Pcdh9-204;Pcdh9-202;Pcdh9-207;Pcdh9-201;Pcdh9-206;Pcdh9-203;Pcdh9-205,Pcdh9;Pcdh9;Pcdh9;Pcdh9;Pcdh9;Pcdh9;Pcdh9;Pcdh9,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,10,211712,ENSMUSG00000055421,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg08040307,0.206286267,NA,0.759356527,NA,NA,NA,Zzz3,Zzz3_fiveUTR,3,152427304,152427353,152427304,152427305,50,+,CGTATTGTAGGGACTTGCCATAGTATGGCTGCTTCCCGATCTACTCGTGT,5' UTR,3,152395473,152459474,64002,1,Zzz3-204,31831,Zzz3-204;Zzz3-206;Zzz3-202;Zzz3-207;Zzz3-208;Zzz3-210;Zzz3-201;Zzz3-203,Zzz3;Zzz3;Zzz3;Zzz3;Zzz3;Zzz3;Zzz3;Zzz3,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,7,108946,ENSMUSG00000039068,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg08056859,0.051742719,NA,NA,NA,NA,NA,Gm1043,Gm1043_fiveUTR,5,37124927,37124976,37124927,37124928,50,+,CGCCAAGGATCAGAACGAGCTGTTAGAATTCAGAGTGCTAGAACTCGAAG,5' UTR,5,37085370,37229342,143973,1,Gm1043-205,39557,Gm1043-205;Jakmip1-201;Jakmip1-202;Jakmip1-212;Jakmip1-215;Jakmip1-203,Gm1043;Jakmip1;Jakmip1;Jakmip1;Jakmip1;Jakmip1,0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,3,381634,ENSMUSG00000117286,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg08078389,-0.542862905,NA,NA,NA,NA,NA,Maf,Maf_Intergenic_downstream,8,115513634,115513683,115513682,115513683,50,+,ATGCCACCTTTGGTTATTAACATGTCTCTCTCTACTTTTATGATTTTTCG,Distal Intergenic,8,115682942,115707096,24155,2,Maf-201,193413,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,7,23,17132,ENSMUSG00000055435,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk5,
cg08104970,NA,NA,NA,NA,-0.348485434,0.004288454,Gm6411,Gm6411_Intron,13,83732376,83732425,83732376,83732377,50,-,CGTCCTCCTCGGCAGAGGGGGCTGGACTAGACCTTGGACAGCCCCCCCAA,"Intron (C130071C03Rik-201/C130071C03Rik-201, intron 1 of 3)",13,83761132,83762335,1204,2,Gm6411-201,29959,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,36,623241,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg08201223,NA,NA,NA,NA,0.253959844,NA,Cadps2,Cadps2_Intron,6,23272823,23272872,23272823,23272824,50,-,CGGAAAACAGAACATCAGTCTAATCTAGTGTTTAAGGTGAGGTTTTCAAA,"Intron (Cadps2-213/Cadps2, intron 28 of 29)",6,23262773,23839137,576365,2,Cadps2-213,566265,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-211;Cadps2-207;Cadps2-202;Cadps2-210,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg08224918,NA,NA,0.064272602,NA,NA,NA,Ankrd17,Ankrd17_Exon,5,90232275,90232324,90232323,90232324,50,-,ACATGCTGATGGAATGTACCAGAAGGAGTTACAATTCCTGTACTATCTCG,"Exon (Ankrd17-201/Ankrd17, exon 32 of 34)",5,90227166,90366577,139412,2,Ankrd17-201,134253,Ankrd17-201;Ankrd17-204;Ankrd17-203;Ankrd17-202;Ankrd17-205;Ankrd17-207,Ankrd17;Ankrd17;Ankrd17;Ankrd17;Ankrd17;Ankrd17,0;0;0;0;0;7364,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,11,12,81702,ENSMUSG00000055204,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg08244911,NA,NA,-0.35364324,NA,NA,NA,Casz1,Casz1_Intron,4,148930515,148930564,148930515,148930516,50,-,CGCCACATCAGTGACAGAGTAATTAACAAACATTGCGAGATCAATGAGGA,"Intron (Casz1-201/Casz1, intron 5 of 15)",4,148804429,148945129,140701,1,Casz1-201,126086,Casz1-201;Casz1-202;Casz1-206;Casz1-204,Casz1;Casz1;Casz1;Casz1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk2,
cg08247363,NA,NA,-0.012195487,-0.134300563,NA,NA,Gm38154,Gm38154_Intergenic_upstream,3,17616933,17616982,17616981,17616982,50,+,GGCATTTGCCAATCTAAGCAGCACTGGTAGGCAAACAAGCATGGCACACG,Distal Intergenic,3,17670688,17671027,340,1,Gm38154-201,-53706,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,7,15,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA6,
cg08256518,NA,NA,-0.01305357,NA,NA,NA,Foxp1,Foxp1_Intron,6,99354796,99354845,99354844,99354845,50,+,ATCCTTAAAAAGACTAAAATAGTTTCATCCTTTCATAACCTGTCATCACG,"Intron (Foxp1-204/Foxp1, intron 1 of 18)",6,98925342,99435345,510004,2,Foxp1-204,80500,Foxp1-204;Foxp1-220;Foxp1-221;Foxp1-222;Foxp1-224;Foxp1-227;Foxp1-219;Gm20696-201,Foxp1;Foxp1;Foxp1;Foxp1;Foxp1;Foxp1;Foxp1;Gm20696,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,64,87,108655,ENSMUSG00000030067,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk5,
cg08256909,NA,NA,NA,NA,0.502684393,0.473015592,Nr4a3,Nr4a3_fiveUTR,4,48049079,48049128,48049079,48049080,50,+,CGCTGGAGAGACCCCCAGCCCCACCATTCAGCGCGCAAGATACCCTCCAG,Promoter (<=1kb),4,48049114,48086447,37334,1,Nr4a3-203,0,Nr4a3-201;Nr4a3-204;Nr4a3-203;Nr4a3-202,Nr4a3;Nr4a3;Nr4a3;Nr4a3,0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,20,18124,ENSMUSG00000028341,mapped to different genes,4,48048919,48049113,195,*,195,16,0.687179487,0.731707317,0.082051282,3.81E-11,CpGisland,TRUE,BivProm2,
cg08284867,NA,-0.04891825,NA,NA,NA,NA,Gm49473,Gm49473_Intergenic_downstream,15,102777209,102777258,102777257,102777258,50,-,GATGATATTTAAAAAATGGTTCTGTAATTGCAATGAGGCCCTCTAGGCCG,Distal Intergenic,15,102795121,102795371,251,2,Gm49473-201,18162,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,6,12,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC2,D?
cg08303653,NA,NA,NA,-0.037271759,NA,NA,Nfib,Nfib_Exon,4,82498558,82498607,82498558,82498559,50,+,CGCAGTTTGGCAAGGAGCCTGGATGCCCACTTCTGTTTGATTTCAGGCTT,"Exon (Nfib-201/Nfib, exon 2 of 12)",4,82290173,82505308,215136,2,Nfib-201,6701,Nfib-201;Nfib-203;Nfib-202;Nfib-205;Nfib-206;Nfib-204;Nfib-207;Nfib-209;Nfib-210;Nfib-208;Nfib-212;Nfib-211,Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib;Nfib,0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,14,66,18028,ENSMUSG00000008575,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg08327269,NA,NA,NA,NA,-0.243341143,NA,Cerkl,Cerkl_Promoter,2,79456933,79456982,79456933,79456934,50,+,CGCGGAGCGCTCCATTCCGGCCCCTTTGTGGCCAGAAGAAAGTGGCCCAT,Promoter (<=1kb),2,79338569,79456785,118217,2,Cerkl-210,-148,Cerkl-210;Neurod1-201,Cerkl;Neurod1,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,15,228094,ENSMUSG00000075256,mapped to different genes,2,79456843,79457022,180,*,180,14,0.622222222,0.830039526,0.077777778,1.72E-09,CpGisland,TRUE,BivProm2,
cg08333796,NA,NA,NA,NA,-1.799597967,NA,Adgrb1,Adgrb1_fiveUTR,15,74516215,74516264,74516263,74516264,50,-,CTGGCTCCCGATTCGGGATCCAGTTTCAGAGAGCGAGAGATTGGGGAGCG,Promoter (<=1kb),15,74516195,74589464,73270,1,Adgrb1-201,20,Adgrb1-201;Adgrb1-205;Adgrb1-206,Adgrb1;Adgrb1;Adgrb1,0;-174;-567,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,5,5,107831,ENSMUSG00000034730,conserved gene and region,15,74516202,74517009,808,*,808,101,0.742574257,0.914723816,0.125,1.74E-87,CpGisland,TRUE,BivProm3,
cg08391895,NA,NA,NA,0.47658707,NA,NA,Rbm15,Rbm15_Exon,3,107330210,107330259,107330210,107330211,50,-,CGCACCACGGACAATGATCATGACCAGGTAATCTTCTTCAGATTTGGCCA,"Exon (Rbm15-201/Rbm15, exon 1 of 2)",3,107325421,107333673,8253,2,Rbm15-201,3414,Rbm15-201;Rbm15-202,Rbm15;Rbm15,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,9,229700,ENSMUSG00000048109,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg08402704,1.328840558,0.480659361,NA,NA,NA,NA,Gm17304,Gm17304_Exon,5,106574936,106574985,106574936,106574937,50,+,CGAAGCGACGTGGAAACCCTTCCACCAAAATGAGCTGTGATATCCTTTTG,"Exon (Gm29464-201/Gm29464-201, exon 1 of 1)",5,106609098,106609201,104,1,Gm17304-201,-34113,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,35,NA,NA,mapped to different genes,5,106574318,106574945,628,*,628,82,0.75477707,0.925521208,0.130573248,6.09E-73,CpGisland,TRUE,TSS2,
cg08406509,NA,NA,0.073909949,NA,NA,NA,Evx1,Evx1_fiveUTR,6,52313495,52313544,52313543,52313544,50,+,GGTTTCCTTTCATCTTCGCTGTGGCAGACGTTTCTATTTATCCACTTGCG,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,0,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,19,14028,ENSMUSG00000005503,mapped to different genes,6,52313448,52313581,134,*,134,12,0.574626866,1.093877551,0.089552239,6.76E-09,CpGisland,TRUE,BivProm1,
cg08477918,NA,NA,NA,0.075323417,NA,NA,Fchsd2,Fchsd2_Exon,7,101246313,101246362,101246313,101246314,50,-,CGCCCAACTGGTGGATATTGAGCTCTCCCCTGTCAGTGCTCTGAGAATGA,"Exon (Fchsd2-201/Fchsd2, exon 11 of 21)",7,101108733,101284405,175673,1,Fchsd2-201,137580,Fchsd2-201;Fchsd2-202;Fchsd2-207;Fchsd2-210,Fchsd2;Fchsd2;Fchsd2;Fchsd2,0;0;0;-4480,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,2,207278,ENSMUSG00000030691,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg08496775,-0.07147084,NA,NA,NA,NA,NA,Stmn2,Stmn2_fiveUTR,3,8509353,8509402,8509401,8509402,50,+,CAGCACCATTGGCCGATCAATATTTAATGCTTGGAGATTCTGACTCTGCG,Promoter (<=1kb),3,8509360,8561606,52247,1,Stmn2-201,0,Stmn2-201;Stmn2-202;Stmn2-204,Stmn2;Stmn2;Stmn2,0;-113;-184,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,1,20257,ENSMUSG00000027500,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg08527720,NA,NA,NA,0.00998726,NA,NA,Eri3,Eri3_Intron,4,117644991,117645040,117645039,117645040,50,-,GCTGCAGCCGATGAGGGCTACTTCATCTATTAAACCCAATACACTTGTCG,"Intron (Eri3-201/Eri3, intron 7 of 8)",4,117550365,117674297,123933,1,Eri3-201,94626,Eri3-201;Eri3-206;Eri3-203,Eri3;Eri3;Eri3,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,82,97,140546,ENSMUSG00000033423,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg08553905,-0.000782478,NA,NA,NA,NA,NA,Fbxo33,Fbxo33_fiveUTR,12,59219448,59219497,59219448,59219449,50,+,CGGGGCTGCGGCACTGACAAGAACAACAACATCAATGACTAGGAAGAAGG,Promoter (<=1kb),12,59200655,59219725,19071,2,Fbxo33-201,228,Fbxo33-201;Fbxo33-203,Fbxo33;Fbxo33,0;-647,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,11,70611,ENSMUSG00000035329,conserved gene but different region,12,59218669,59219457,789,*,789,92,0.70468948,0.946289826,0.116603295,1.43E-76,CpGisland,TRUE,TSS1,
cg08563010,NA,-0.152449693,NA,NA,NA,NA,Sox5,Sox5_Intron,6,144181099,144181148,144181147,144181148,50,-,TTCTGTTTCACTTGTTGGCAAACTTACATTTCAAAACAACAACAAAAACG,"Intron (Sox5-201/Sox5, intron 1 of 14)",6,143828425,144209480,381056,2,Sox5-201,28332,Sox5-201;Sox5-214;Sox5-205;Sox5-202;Sox5-209;Sox5-207;Sox5-210;Sox5-212;Sox5-208;Sox5-213,Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5;Sox5,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,61,71,20678,ENSMUSG00000041540,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg08569883,NA,NA,0.094047516,NA,-0.027252925,NA,Trim8,Trim8_Exon,19,46515588,46515637,46515588,46515589,50,+,CGCCTCCCAGCAGCCCGGCCACCAGGATTTCTACAGGGTGTATGGGCAGC,"Exon (Trim8-201/Trim8, exon 6 of 6)",19,46501702,46516848,15147,1,Trim8-201,13886,Trim8-201;Trim8-202,Trim8;Trim8,0;928,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,15,21,93679,ENSMUSG00000025034,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh4,
cg08591301,NA,NA,-0.204018353,NA,NA,NA,Gm49657,Gm49657_Intergenic_downstream,16,70299214,70299263,70299214,70299215,50,+,CGGCAAAGTACAAAATGGTAATTAAAAATTTCTAGTTCAGTGCGAGGCAC,Distal Intergenic,16,70285257,70285681,425,1,Gm49657-201,13957,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,1,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies3,
cg08666298,NA,NA,-0.4934789,-0.206700112,NA,NA,Ddx5,Ddx5_threeUTR,11,106783279,106783328,106783327,106783328,50,-,CCAGGATTCACTTGAGAATGTGTCTCTCTCTGGCAGGTCTCGACATGACG,3' UTR,11,106780355,106788532,8178,2,Ddx5-201,5204,Ddx5-201;Ddx5-208;Ddx5-205;Ddx5-207;Ddx5-203;Ddx5-202;Ddx5-209;Ddx5-206;Ddx5-204;Polg2-201;Polg2-203;Polg2-206;Polg2-204;Polg2-202,Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Polg2;Polg2;Polg2;Polg2;Polg2,0;0;0;0;0;0;2722;0;0;-3764;-3742;-3806;-3806;-3777,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,6,13207,ENSMUSG00000020719,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh4,
cg08683365,0.110980568,NA,NA,NA,NA,NA,Lrfn5,Lrfn5_Exon,12,61843384,61843433,61843432,61843433,50,+,CTTGGCCATATATGATGATGGCATCACTTCCCTCACTGCCACAAGAGTCG,"Exon (Lrfn5-201/Lrfn5, exon 4 of 4)",12,61523948,61845258,321311,1,Lrfn5-201,319436,Lrfn5-201;Lrfn5-202,Lrfn5;Lrfn5,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,4,238205,ENSMUSG00000035653,conserved gene and region,,,,,,,,,,,,,TRUE,Quies2,
cg08701183,NA,NA,NA,NA,0.265474292,NA,Gm9267,Gm9267_Intron,12,118529812,118529861,118529860,118529861,50,+,CATGTAAGGTAAATGCTTCAAAGGCCCCCCTTTCAAATTACAGCTCTCCG,"Intron (D230030E09Rik-201/D230030E09Rik-201, intron 1 of 3)",12,118602677,118603080,404,1,Gm9267-201,-72816,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,20,668611,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg08707617,-0.033228514,NA,NA,NA,NA,NA,Bcor,Bcor_Intron,X,12067941,12067990,12067989,12067990,50,+,TTCAGGGCTTAATTACTCCTCCTTGATCCATGGGACTAGACACGACACCG,"Intron (Bcor-202/Bcor, intron 1 of 14)",20,12036740,12080553,43814,2,Bcor-202,12563,Bcor-202;Bcor-203;Bcor-204;Bcor-206;Bcor-201;Bcor-207;Bcor-205,Bcor;Bcor;Bcor;Bcor;Bcor;Bcor;Bcor,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,56,74,71458,ENSMUSG00000040363,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg08716535,0.8544872,NA,NA,NA,NA,NA,Ehbp1,Ehbp1_Exon,11,22006819,22006868,22006867,22006868,50,-,TGCCTTTGTTTTGCTCCAGAGTTCGCTCCAAATGCTCATCTTCTTCTTCG,"Exon (Ehbp1-201/Ehbp1, exon 24 of 24)",11,22005828,22285838,280011,2,Ehbp1-201,278970,Ehbp1-201;Ehbp1-202;Ehbp1-207;Otx1-202,Ehbp1;Ehbp1;Ehbp1;Otx1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,11,45,216565,ENSMUSG00000042302,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg08766215,NA,NA,NA,NA,-0.733277252,NA,Nkx2-1,Nkx2-1_Exon,12,56533689,56533738,56533689,56533690,50,+,CGGGGCCATGTTCTTGCTCACGTCCCCCAGCGAGCCCAGGCCGCCCATGC,"Exon (Nkx2-1-202/Nkx2-1, exon 2 of 2)",12,56531958,56535106,3149,2,Nkx2-1-202,1368,Nkx2-1-202;Nkx2-1-201,Nkx2-1;Nkx2-1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,9,29,21869,ENSMUSG00000001496,mapped to different genes,12,56533137,56533945,809,*,809,82,0.694684796,0.841425672,0.101359703,8.59E-63,CpGisland,TRUE,ReprPC1,
cg08777014,-0.055565169,NA,NA,NA,NA,NA,Plp1,Plp1_Exon,X,136832208,136832257,136832208,136832209,50,+,CGACAAGGTGATCATCCTCAGGATTTTGTGGCAATAACAAGGGGTGGGGG,"Exon (Plp1-201/Plp1, exon 3 of 7)",20,136822671,136839733,17063,1,Plp1-201,9537,Plp1-201;Plp1-202;Plp1-203;Plp1-204,Plp1;Plp1;Plp1;Plp1,0;0;0;-994,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,8,18823,ENSMUSG00000031425,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg08809534,0.473702476,NA,NA,NA,NA,NA,Klhl29,Klhl29_Exon,12,5102752,5102801,5102800,5102801,50,+,TCTCTGCCTTCAACAACAATTTTCAGGTCTGTAAACGCTTTCGCTCTGCG,"Exon (Klhl29-201/Klhl29, exon 6 of 14)",12,5077472,5375682,298211,2,Klhl29-201,272881,Klhl29-201;Klhl29-202,Klhl29;Klhl29,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,23,208439,ENSMUSG00000020627,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg08862467,NA,NA,-0.167616113,NA,NA,NA,Fryl,Fryl_Exon,5,73064516,73064565,73064516,73064517,50,-,CGACTAGCTGTTTCTTTGCAAAACTGAGTTGGGCTGTCAAAATGCTGGAT,"Exon (Fryl-219/Fryl, exon 5 of 21)",5,73019987,73071175,51189,2,Fryl-219,6610,Fryl-219;Fryl-202;Fryl-210;Fryl-201;Fryl-217;Fryl-211;Fryl-216;Fryl-214,Fryl;Fryl;Fryl;Fryl;Fryl;Fryl;Fryl;Fryl,0;0;0;0;0;0;0;6734,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,7,72313,ENSMUSG00000070733,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg08873407,0.00346482,0.118179796,NA,NA,NA,NA,Gm7729,Gm7729_Intergenic_upstream,18,27388259,27388308,27388259,27388260,50,+,CGTTTGACATTCAGGGCTAGAAGGTTGCCGGTCTGTAATCACTAGTTAAA,Distal Intergenic,18,27598644,27599756,1113,1,Gm7729-201,-210336,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,11,22,665646,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC4,
cg08933907,NA,NA,NA,-0.116116519,NA,NA,Nr5a1,Nr5a1_Promoter,2,38718789,38718838,38718837,38718838,50,+,GCTGTTTCCGCTGCACCCCTTATCAGCCTGCTGCCAGATGTTCAGATCCG,Promoter (4-5kb),2,38692660,38714542,21883,2,Nr5a1-201,-4247,Nr5a1-201;Nr6a1-202;Nr6a1-210;Nr6a1-201,Nr5a1;Nr6a1;Nr6a1;Nr6a1,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,7,26423,ENSMUSG00000026751,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm3,
cg08935648,NA,NA,-0.096307328,NA,NA,NA,Pou3f1,Pou3f1_Intron,4,124595004,124595053,124595004,124595005,50,+,CGCCCTCAGGAAAGTCTGGCTGGTACAGATTGCCTGAGTCATGAATATTC,"Intron (Gm2164-201/Gm2164-201, intron 1 of 1)",4,124656807,124660655,3849,1,Pou3f1-201,-61754,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,43,85,18991,ENSMUSG00000090125,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg08955338,0.108034624,NA,NA,NA,NA,NA,Gm12685,Gm12685_Intergenic_downstream,4,99374768,99374817,99374816,99374817,50,+,TATACATGTTCAAATAATTGCTCATCCTAATGTGCAGTGATCTGTATTCG,Distal Intergenic,4,99418498,99418711,214,2,Gm12685-201,43894,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,13,13,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC3,
cg08977423,0.474881131,NA,NA,NA,NA,NA,Tcf7l2,Tcf7l2_Exon,19,55910640,55910689,55910640,55910641,50,-,CGTAGGACAAATCCCCCATCCGCTAGGATGGTTAGTACCACAGTAAGGAG,"Exon (Tcf7l2-213/Tcf7l2, exon 6 of 14)",19,55741820,55933229,191410,1,Tcf7l2-213,168820,Tcf7l2-213;Tcf7l2-201;Tcf7l2-208;Tcf7l2-211;Tcf7l2-212;Tcf7l2-206;Tcf7l2-204;Tcf7l2-205;Tcf7l2-222;Tcf7l2-215;Tcf7l2-214;Tcf7l2-207;Tcf7l2-202;Tcf7l2-209;Tcf7l2-210;Tcf7l2-217;Tcf7l2-220;Tcf7l2-218;Tcf7l2-203;Tcf7l2-216;Tcf7l2-219;Tcf7l2-221,Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2;Tcf7l2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,Exon,14,88,21416,ENSMUSG00000024985,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg09010998,-0.411455289,NA,NA,NA,NA,NA,Zeb1,Zeb1_fiveUTR,18,5591905,5591954,5591953,5591954,50,+,GGATCATGGCGGATGGCCCCAGGTGTAAGCGCAGAAAGCAGGCGAACCCG,Promoter (<=1kb),18,5591912,5766570,174659,1,Zeb1-206,0,Zeb1-212;Zeb1-201;Zeb1-204;Zeb1-202;Zeb1-209;Zeb1-206;Zeb1-208;Zeb1-205;Zeb1-211;Zeb1-207,Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1;Zeb1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,7,21417,ENSMUSG00000024238,mapped to different genes,18,5591882,5592967,1086,*,1086,159,0.745856354,1.076353436,0.14640884,2.52E-150,CpGisland,TRUE,,
cg09060651,NA,-0.124295646,NA,NA,NA,NA,Cdk12,Cdk12_Intergenic_downstream,11,98290142,98290191,98290190,98290191,50,+,AGGGCGGCATGCTAATGTGGAAATTTAAAGAGCCGCTCGGCTTTAAATCG,Distal Intergenic,11,98263502,98268011,4510,1,Cdk12-204,26640,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,17,25,69131,ENSMUSG00000003119,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg09108310,-0.001085238,NA,NA,NA,NA,NA,Gm13835,Gm13835_Intron,6,31217611,31217660,31217659,31217660,50,-,CTGTTTACCTCAAGTTTGAATTTTATCTGCGCAACATTAGCTGGAATGCG,"Intron (Lncpint-204/Lncpint-204, intron 1 of 3)",6,31141979,31142663,685,2,Gm13835-201,-74997,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,100038973,NA,mapped to different genes,,,,,,,,,,,,,TRUE,PromF4,
cg09123368,NA,NA,NA,NA,-0.298069703,NA,Vax1,Vax1_Promoter,19,59171401,59171450,59171449,59171450,50,+,TATTAACAAACAGTCCTCTGAGTGCGGCGGTCTGGCGTGGCTCCTGGGCG,Promoter (1-2kb),19,59166187,59170056,3870,2,Vax1-201,-1345,Vax1-201;Vax1-202,Vax1;Vax1,0;-4421,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,12,18,22326,ENSMUSG00000006270,conserved gene and region,19,59171425,59171501,77,*,77,8,0.727272727,0.811594203,0.103896104,1.63E-06,CpGisland,TRUE,ReprPC9,
cg09207276,-0.419547547,NA,NA,NA,NA,NA,Sp5,Sp5_fiveUTR,2,70475005,70475054,70475005,70475006,50,+,CGCTATTCTTTGATGATTGGGTAGCGGCAAACTTCAAAGCCATAAATCTT,Promoter (<=1kb),2,70474923,70477729,2807,1,Sp5-201,82,Sp5-201,Sp5,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,11,64406,ENSMUSG00000075304,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg09207493,NA,NA,NA,NA,-0.264847445,NA,Cbln1,Cbln1_Exon,8,87471724,87471773,87471724,87471725,50,-,CGTGGAAGTTAAAACTGTAGATCCCTTTGCGCGGGGCGATGAAAGTGCTG,Promoter (<=1kb),8,87468405,87472609,4205,2,Cbln1-201,836,Cbln1-201;Cbln1-203;Cbln1-202,Cbln1;Cbln1;Cbln1,0;-656;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,4,12404,ENSMUSG00000031654,conserved gene but different region,8,87471724,87471907,184,*,184,14,0.543478261,1.040808081,0.076086957,2.30E-09,CpGisland,TRUE,BivProm2,
cg09217748,-0.000858957,NA,NA,NA,NA,NA,Bcl6,Bcl6_Promoter,16,23988936,23988985,23988984,23988985,50,+,GCTGTAGCAAAGCTCGGCCTCTGGAATTCTGAGAACTAATTTGCTATTCG,Promoter (<=1kb),16,23965052,23988852,23801,2,Bcl6-201,-84,Bcl6-201;Gm37419-201,Bcl6;Gm37419,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,7,18,12053,ENSMUSG00000022508,conserved gene but different region,16,23988657,23989142,486,*,486,53,0.639917695,1.065348664,0.109053498,1.22E-42,CpGisland,TRUE,,
cg09243281,NA,NA,-0.007875026,NA,NA,NA,Ranbp6,Ranbp6_Exon,19,29812379,29812428,29812427,29812428,50,+,TCTTGAATACACTGGTCCAACAACCGTTTGATGATATCCAAATCATGCCG,Promoter (<=1kb),19,29808400,29812974,4575,2,Ranbp6-201,546,Ranbp6-201;Ranbp6-202,Ranbp6;Ranbp6,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,240614,ENSMUSG00000074909,conserved gene and region,,,,,,,,,,,,,TRUE,PromF3,
cg09256836,NA,NA,-0.151625456,NA,NA,NA,Fbxo11,Fbxo11_threeUTR,17,87993146,87993195,87993194,87993195,50,+,CCTTTCATTGTCACATTAACACCAGATGCTAAAAATAAGCCTCCAAACCG,3' UTR,17,87990859,88065028,74170,2,Fbxo11-203,71833,Fbxo11-203;Fbxo11-201;Fbxo11-204;Fbxo11-206;Fbxo11-202;Msh6-201,Fbxo11;Fbxo11;Fbxo11;Fbxo11;Fbxo11;Msh6,0;0;0;0;0;18084,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,3,225055,ENSMUSG00000005371,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg09266044,NA,NA,NA,NA,NA,0.58430481,Mbnl2,Mbnl2_Exon,14,120389001,120389050,120389001,120389002,50,+,CGTAACCGTTTGTATGGATTACATAAAGGGGCGTTGCATGAGGGAGAAAT,"Exon (Mbnl2-201/Mbnl2, exon 5 of 9)",14,120275669,120431697,156029,1,Mbnl2-201,113332,Mbnl2-201;Mbnl2-204;Mbnl2-206;Mbnl2-202;Mbnl2-203;Mbnl2-208;Mbnl2-210,Mbnl2;Mbnl2;Mbnl2;Mbnl2;Mbnl2;Mbnl2;Mbnl2,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,10,16,105559,ENSMUSG00000022139,conserved gene and region,14,120388889,120389033,145,*,145,10,0.544827586,0.930680359,0.068965517,2.06E-06,CpGisland,TRUE,TxEx3,
cg09289224,0.169234408,NA,0.59845241,NA,NA,NA,Slc44a2,Slc44a2_Exon,9,21353004,21353053,21353052,21353053,50,-,AGGACCTGGAAAGGAATGACGGCTCTCAGGAGCGACCCTACTTCATGTCG,"Exon (Slc44a2-205/Slc44a2, exon 6 of 7)",9,21320698,21355028,34331,1,Slc44a2-210,32306,Slc44a2-210;Slc44a2-207;Slc44a2-201;Slc44a2-202;Slc44a2-209;Slc44a2-205;Slc44a2-203,Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2,0;0;0;8122;6020;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,68682,ENSMUSG00000057193,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg09341324,NA,NA,0.243330269,NA,NA,NA,Rps6kb1,Rps6kb1_Exon,11,86519942,86519991,86519990,86519991,50,-,TAAATTAAATCCACGATGAAGGGATGCTTTACTTCCTCCAGAATATTCCG,"Exon (Rps6kb1-207/Rps6kb1, exon 5 of 15)",11,86498871,86544805,45935,2,Rps6kb1-207,24814,Rps6kb1-207;Rps6kb1-201;Rps6kb1-203;Rps6kb1-202;Rps6kb1-206,Rps6kb1;Rps6kb1;Rps6kb1;Rps6kb1;Rps6kb1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,4,72508,ENSMUSG00000020516,conserved gene but different region,,,,,,,,,,,,,TRUE,Quies3,
cg09357573,NA,0.877476459,NA,NA,NA,NA,Mrm1,Mrm1_Intergenic_downstream,11,84726079,84726128,84726127,84726128,50,+,ACATTAAACCAGGAGTCAGGTGATGGGTTCCTTCCGTCTACGCCTATCCG,Distal Intergenic,11,84814743,84815390,648,2,Mrm1-203,89262,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,37,42,217038,ENSMUSG00000018405,conserved gene and region,11,84726113,84726148,36,*,36,6,0.722222222,1.411764706,0.166666667,3.87E-06,CpGisland,TRUE,ReprPC9,
cg09421985,NA,NA,NA,NA,0.511096953,NA,Phox2b,Phox2b_Exon,5,67098776,67098825,67098776,67098777,50,+,CGGACGTGGCCCCAAAAGTGGTCCTTATCGGGTTATACTGGAAGCCACTG,Promoter (<=1kb),5,67094399,67099301,4903,2,Phox2b-201,476,Phox2b-201;Phox2b-202,Phox2b;Phox2b,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,28,18935,ENSMUSG00000012520,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg09474015,NA,NA,NA,-0.751881654,NA,NA,Hoxa9,Hoxa9_Exon,6,52225706,52225755,52225754,52225755,50,+,AGGTTTAATGCCATAAGGCCGGCTGGAGGGCAAGCCCGCGAAGGAGAGCG,"Exon (Hoxa9-201/Hoxa9, exon 1 of 2)",6,52223100,52227370,4271,2,Hoxa9-201,1615,Hoxa7-204;Hoxa9-201;Hoxa9-203;Hoxa9-202;Hoxa9-204;Hoxa9-205,Hoxa7;Hoxa9;Hoxa9;Hoxa9;Hoxa9;Hoxa9,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,14,15405,ENSMUSG00000038227,mapped to different genes,6,52225670,52226051,382,*,382,36,0.678010471,0.824460432,0.094240838,1.10E-26,CpGisland,TRUE,BivProm1,
cg09486418,NA,NA,NA,NA,0.140400955,NA,Tfap2a,Tfap2a_fiveUTR,13,40738277,40738326,40738325,40738326,50,-,TCACCAACATCTCACCTGGTCATAAAGAGCTGGGTTGCTACCTGCCGACG,Promoter (<=1kb),13,40716605,40738376,21772,2,Tfap2a-203,50,Tfap2a-202;Tfap2a-203;Tfap2a-208;Tfap2a-206;Tfap2a-204,Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,6,57,21418,ENSMUSG00000021359,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg09522374,NA,-0.243031281,NA,NA,NA,NA,Rnf220,Rnf220_Intron,4,117359982,117360031,117359982,117359983,50,-,CGAGCACAGCTTTTTCCACTTAATAAGCAGAGTGCTGACTTCATTGCGGG,"Intron (Rnf220-201/Rnf220, intron 2 of 14)",4,117271463,117497052,225590,2,Rnf220-201,137021,Rnf220-201;Rnf220-202;Rnf220-207,Rnf220;Rnf220;Rnf220,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,132,152,66743,ENSMUSG00000028677,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC7,
cg09532103,NA,NA,-0.389770335,NA,NA,NA,Nfix,Nfix_Intron,8,84770828,84770877,84770828,84770829,50,+,CGTAGCTGAGTGGAGGCTAAAAATTAACCAGCCATCTCTGTTTCAATTTG,"Intron (Nfix-204/Nfix, intron 2 of 10)",8,84704712,84773396,68685,2,Nfix-204,2519,Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-205,Nfix;Nfix;Nfix;Nfix;Nfix,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,49,18032,ENSMUSG00000001911,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg09556778,NA,NA,NA,0.10900853,NA,NA,Nr6a1,Nr6a1_Exon,2,38739015,38739064,38739015,38739016,50,+,CGTGTAATCCTTGATTGAGAGCTCGCAGAAGAAAGGCAGTTTCTTGATCC,"Exon (Nr6a1-202/Nr6a1, exon 9 of 12)",2,38723370,38927688,204319,2,Nr6a1-202,188624,Nr6a1-202;Nr6a1-210;Nr6a1-201;Nr6a1-204;Nr6a1-205;Nr6a1-207;Nr6a1-206;Nr6a1-208;Nr6a1-209;Nr6a1-211,Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1;Nr6a1,0;0;0;0;0;45456;46047;0;45405;24701,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,12,14536,ENSMUSG00000063972,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh5,
cg09571697,0.226078528,NA,0.500909909,NA,NA,NA,Lrba,Lrba_Intron,3,86556893,86556942,86556893,86556894,50,+,CGTGAAAGTGCAATGCAAATTATGACAGTTACAACCTTCTGTTTTGTTTA,"Intron (Lrba-202/Lrba, intron 40 of 50)",3,86224680,86746712,522033,1,Lrba-202,332213,Lrba-202;Lrba-204;Lrba-201;Lrba-203;Lrba-205;Lrba-206,Lrba;Lrba;Lrba;Lrba;Lrba;Lrba,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,45,80877,ENSMUSG00000028080,conserved gene and region,,,,,,,,,,,,,TRUE,Acet4,
cg09573865,NA,NA,NA,NA,-0.118745134,NA,Hoxc5,Hoxc5_Exon,15,102991096,102991145,102991096,102991097,50,+,CGAGCGTGGTGCAATATCCCGACTGTAAATCCTCCGCCAACACTAACAGT,"Exon (Hoxc8-201/Hoxc8, exon 1 of 2)",15,102967443,103015676,48234,1,Hoxc5-202,23653,Hoxc5-202;Hoxc8-201;Hoxc8-202,Hoxc5;Hoxc8;Hoxc8,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,conserved gene and region,15,102990435,102991303,869,*,869,73,0.63406214,0.844205792,0.084004603,1.12E-49,CpGisland,TRUE,BivProm1,
cg09591915,NA,NA,NA,NA,-0.293923173,NA,Hoxc10,Hoxc10_fiveUTR,15,102966841,102966890,102966889,102966890,50,+,AACCCCTCTCTCTGAAAATGACATGCCCTCGCAATGTAACTCCGAACTCG,Promoter (<=1kb),15,102966796,102971893,5098,1,Hoxc10-201,45,Hoxc10-201;Hoxc5-202,Hoxc10;Hoxc5,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,21,209448,ENSMUSG00000022484,mapped to different genes,15,102966870,102967117,248,*,248,20,0.625,0.826666667,0.080645161,1.13E-13,CpGisland,TRUE,BivProm1,
cg09635067,-0.664397916,NA,NA,NA,NA,NA,Rab29,Rab29_Exon,1,131867727,131867776,131867727,131867728,50,-,CGATATTCCCAGGACAGCTTCAGCAAACACTACAAGTCCACGGTGGGAGG,Promoter (<=1kb),1,131867224,131872739,5516,1,Rab29-202,503,Rab29-202;Rab29-201;Rab29-203;Rab29-204,Rab29;Rab29;Rab29;Rab29,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,226422,ENSMUSG00000026433,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg09660031,-0.069337878,NA,NA,NA,NA,NA,Mast4,Mast4_Exon,13,102754217,102754266,102754217,102754218,50,+,CGTCCATTTATCTGATCCAAGTGCTCTGAAAAACTGCCAACTGTACAAAG,"Exon (Mast4-220/Mast4, exon 23 of 28)",13,102732486,103334192,601707,2,Mast4-205,579926,Mast4-205;Mast4-220;Mast4-207;Mast4-218;Mast4-212;Mast4-201;Mast4-208;Mast4-213,Mast4;Mast4;Mast4;Mast4;Mast4;Mast4;Mast4;Mast4,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,8,328329,ENSMUSG00000034751,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh8,
cg09670972,NA,0.786677,NA,NA,NA,NA,Ypel5,Ypel5_Exon,17,72848613,72848662,72848613,72848614,50,-,CGGGTCATGCTCACTGGCCGCCACATGGTTCGAGATGTGAGCTGCAAAAA,"Exon (Ypel5-201/Ypel5, exon 3 of 3)",17,72836453,72851195,14743,1,Ypel5-201,12160,Ypel5-201;Ypel5-202;Ypel5-205;Ypel5-203;Ypel5-204,Ypel5;Ypel5;Ypel5;Ypel5;Ypel5,0;0;0;10242;7682,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,383295,ENSMUSG00000039770,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg09681972,NA,NA,NA,NA,-0.856871369,NA,Hoxb8,Hoxb8_Exon,11,96284201,96284250,96284201,96284202,50,-,CGCTACCAGACCCTGGAGCTGGAGAAGGAGTTCCTATTTAATCCCTATCT,"Exon (Hoxb8-201/Hoxb8, exon 2 of 2)",11,96281905,96285315,3411,1,Hoxb8-201,2296,Hoxb7-201;Hoxb7-202;Hoxb8-201;Hoxb8-202;Hoxb8-203,Hoxb7;Hoxb7;Hoxb8;Hoxb8;Hoxb8,0;-4465;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,26,15416,ENSMUSG00000056648,mapped to different genes,11,96284141,96284202,62,*,62,7,0.709677419,0.96875,0.112903226,5.83E-06,CpGisland,TRUE,,
cg09705951,NA,NA,NA,NA,-0.27277686,NA,Chd5,Chd5_Promoter,4,152338581,152338630,152338629,152338630,50,-,GAACGATGGGATGGGGTTGCCACAGCAACCAGACTGGACGTCACAATCCG,Promoter (<=1kb),4,152338651,152390194,51544,1,Chd5-205,-70,Chd5-202;Chd5-205;Chd5-201;Chd5-204;Rpl22-204;Rpl22-208,Chd5;Chd5;Chd5;Chd5;Rpl22;Rpl22,0;0;0;0;12714;12712,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,2,7,269610,ENSMUSG00000005045,mapped to different genes,4,152338556,152339428,873,*,873,126,0.78465063,0.959390863,0.144329897,2.67E-118,CpGisland,TRUE,BivProm2,
cg09710669,0.396172637,NA,NA,NA,NA,NA,Hnrnpa2b1,Hnrnpa2b1_fiveUTR,6,51469679,51469728,51469679,51469680,50,-,CGGACTCAGTCGCTTCAGCCCGATTTCCCGCAGCCGAGCGAGATGAGAGA,Promoter (<=1kb),6,51460932,51469894,8963,2,Hnrnpa2b1-201,166,Cbx3-202;Cbx3-201;Cbx3-207;Cbx3-203;Cbx3-206;Cbx3-204;Cbx3-205;Hnrnpa2b1-201;Hnrnpa2b1-207;Hnrnpa2b1-202;Hnrnpa2b1-209;Hnrnpa2b1-204;Hnrnpa2b1-210;Hnrnpa2b1-203;Hnrnpa2b1-205;Hnrnpa2b1-212;Hnrnpa2b1-206;Hnrnpa2b1-213,Cbx3;Cbx3;Cbx3;Cbx3;Cbx3;Cbx3;Cbx3;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1;Hnrnpa2b1,-632;-802;-935;-938;-949;-967;-1018;0;0;0;0;0;0;0;-2978;-3442;-3012;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,3,53379,ENSMUSG00000004980,conserved gene and region,6,51469204,51471252,2049,*,2049,223,0.674475354,0.95734624,0.108833577,4.65E-177,CpGisland,TRUE,"PromF4,PromF4",
cg09723377,NA,0.371851086,NA,NA,NA,NA,Dll1,Dll1_Promoter,17,15379007,15379056,15379007,15379008,50,-,CGCCATCAGCCCCCTAGCCAGCCATCTGCTCCGAACCAAATGGCGTTTTT,Promoter (2-3kb),17,15374794,15376872,2079,2,Dll1-205,-2184,Dll1-201;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1,-3031;-4935;-3907;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm2,
cg09731876,0.163469833,NA,NA,NA,NA,NA,Wdr7,Wdr7_Intron,18,63894303,63894352,63894351,63894352,50,-,TTAACTAACAACTCATTAGCTTAGTTGATGTTTTTGTCAATATTAATTCG,"Intron (Wdr7-201/Wdr7, intron 21 of 27)",18,63708685,63989776,281092,1,Wdr7-201,185618,Gm19076-201;Wdr7-201;Wdr7-204,Gm19076;Wdr7;Wdr7,4679;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,8,11,104082,ENSMUSG00000040560,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA15,
cg09753325,NA,NA,NA,NA,-0.068959312,NA,Gmppa,Gmppa_Intergenic_downstream,1,75444399,75444448,75444447,75444448,50,-,CAGCTCCATCATAAATATGATAATTTAATTATTTTCTCAGCAAAACACCG,Downstream (1-2kb),1,75442224,75443179,956,1,Gmppa-203,2224,Gmppa-201;Gmppa-202;Gmppa-210;Gmppa-206;Gmppa-211;Gmppa-208;Gmppa-204;Gmppa-213;Gmppa-205;Gmppa-207;Gmppa-203,Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa;Gmppa,8469;8456;8432;8431;8417;8415;8312;7457;2779;2233;2175,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,2,2,69080,ENSMUSG00000033021,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg09816441,0.220105907,NA,0.217683486,NA,NA,NA,C1ql1,C1ql1_Intron,11,102963183,102963232,102963231,102963232,50,+,AGCCTTAATATCTTACTTTGCAAATATAGTTTATTCCTTCAATAAAGCCG,"Intron (2410004I01Rik-201/2410004I01Rik-201, intron 1 of 2)",11,102939264,102946688,7425,2,C1ql1-201,-16495,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,4,23829,ENSMUSG00000045532,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm2,
cg09817427,NA,NA,0.090416499,NA,0.681138011,NA,Tbx18,Tbx18_fiveUTR,9,87731214,87731263,87731262,87731263,50,+,TAATTGAAATTTGTTGCCTTGATCTGTCAGCACTTCCAGGCAGGAGAGCG,Promoter (<=1kb),9,87702800,87731260,28461,2,Tbx18-201,0,Tbx18-201;Tbx18-202,Tbx18;Tbx18,0;-717,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,2,76365,ENSMUSG00000032419,conserved gene and region,9,87731262,87731433,172,*,172,13,0.552325581,0.992014197,0.075581395,1.09E-08,CpGisland,TRUE,BivProm1,
cg09833650,NA,NA,NA,NA,1.540016343,NA,Gm12641,Gm12641_Intergenic_upstream,4,93054320,93054369,93054320,93054321,50,+,CGATTTATCCACTGACAAAATGTGCTAATGAAATGTCACCTTGGACAGCT,Distal Intergenic,4,93106988,93109914,2927,1,Gm12641-201,-52619,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,1,1,620269,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg09841958,NA,NA,NA,NA,-0.289537415,NA,Barhl1,Barhl1_Exon,2,28911341,28911390,28911389,28911390,50,-,CCTGCGGTTCTGGTACCAGGTCTTGACCTGCGTGTCGGTGAGGTTGAGCG,"Exon (Barhl1-201/Barhl1, exon 2 of 3)",2,28907679,28916412,8734,2,Barhl1-201,5022,Barhl1-201;Barhl1-204;Barhl1-203;Barhl1-202;Barhl1-205,Barhl1;Barhl1;Barhl1;Barhl1;Barhl1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,6,54422,ENSMUSG00000026805,conserved gene and region,2,28911288,28911611,324,*,324,29,0.635802469,0.885997171,0.089506173,6.35E-21,CpGisland,TRUE,,
cg09853111,NA,NA,-0.759099189,NA,NA,NA,Foxo6,Foxo6_Exon,4,120286865,120286914,120286865,120286866,50,-,CGCCTTTATCCTTGAAGTAGGGCACGTAACGGACCATCCAGTCGTAGATC,Promoter (<=1kb),4,120267079,120287349,20271,2,Foxo6-201,435,Foxo6-201,Foxo6,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,42,329934,ENSMUSG00000052135,conserved gene and region,4,120286820,120288190,1371,*,1371,160,0.728665208,0.879452187,0.116703136,1.00E-132,CpGisland,TRUE,BivProm1,
cg09863012,NA,NA,NA,NA,-0.487802831,NA,Gm16415,Gm16415_Intergenic_downstream,18,42454236,42454285,42454236,42454237,50,-,CGAAACCTCTCTGCAAACTCTTTGTAGATTCCCATCTGTGACTTGATAAA,Distal Intergenic,18,42441019,42441507,489,1,Gm16415-201,13266,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,4,100042767,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg09920422,-0.241563741,NA,NA,NA,NA,NA,Kdm7a,Kdm7a_Intron,6,39205433,39205482,39205481,39205482,50,+,GTTTAAATGCCTGTGAATCCCTCCCACGCCGGAGTCAAGAGGCTGTGGCG,"Intron (Kdm7a-201/Kdm7a, intron 1 of 19)",6,39136623,39206789,70167,2,Kdm7a-201,1307,Kdm7a-201,Kdm7a,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,8,338523,ENSMUSG00000042599,conserved gene and region,6,39205446,39207371,1926,*,1926,267,0.729491173,1.042169773,0.138629283,2.72E-244,CpGisland,TRUE,,
cg10004854,-0.126678025,NA,NA,NA,NA,NA,Ints6,Ints6_fiveUTR,14,62760636,62760685,62760684,62760685,50,+,ATCAGGAACAGTAAGATGGGCATAGTGCTGGCCGGGGACACCGGGGCCCG,Promoter (<=1kb),14,62676330,62761112,84783,2,Ints6-201,427,Ints6-201;Ints6-202;Ints6-206;Ints6-205;Ints6-204,Ints6;Ints6;Ints6;Ints6;Ints6,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,6,18130,ENSMUSG00000035161,mapped to different genes,14,62760409,62760968,560,*,560,60,0.725,0.81543502,0.107142857,1.08E-47,CpGisland,TRUE,,
cg10049548,NA,0.14715971,NA,NA,NA,NA,C1ql4,C1ql4_Promoter,15,99089190,99089239,99089190,99089191,50,+,CGCGCTGCAGAGAGACACCCAGGTCCGTGTTTGGACTCCAATGTGACATA,Promoter (1-2kb),15,99084086,99087817,3732,2,C1ql4-201,-1373,C1ql4-201;Dnajc22-202,C1ql4;Dnajc22,-1373;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,2,2,239659,ENSMUSG00000001076,conserved gene and region,15,99089170,99089287,118,*,118,10,0.584745763,1.040564374,0.084745763,3.09E-07,CpGisland,TRUE,ReprPC1,
cg10083965,NA,-0.012177413,NA,NA,NA,NA,Vegfa,Vegfa_Exon,17,46021017,46021066,46021065,46021066,50,+,CTGCCTCGCCTTGCAACGCGAGTCTGTGTTTTTGCAGGAACATTTACACG,"Exon (Vegfa-202/Vegfa, exon 6 of 7)",17,46016993,46031815,14823,2,Vegfa-201,10749,Vegfa-201;Vegfa-202;Vegfa-210;Vegfa-207;Vegfa-205;Vegfa-208;Vegfa-204;Vegfa-206;Vegfa-203;Vegfa-209,Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa,0;0;0;0;0;0;0;0;0;10290,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,7,22339,ENSMUSG00000023951,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg10103348,0.278555987,NA,NA,NA,NA,NA,Msl2,Msl2_Exon,9,101075338,101075387,101075338,101075339,50,+,CGACCCCGGAGACCCCAAGGCGTTTACTGAGATTAACAGGCTCTTGCCTT,"Exon (Msl2-202/Msl2, exon 1 of 3)",9,101074101,101101785,27685,1,Msl2-202,1237,Msl2-202;Msl2-201,Msl2;Msl2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,12,19,77853,ENSMUSG00000066415,conserved gene and region,9,101075182,101075428,247,*,247,16,0.51417004,0.987506247,0.064777328,1.37E-09,CpGisland,TRUE,PromF4,
cg10168186,NA,NA,0.58753185,NA,NA,NA,Crtc2,Crtc2_threeUTR,3,90262936,90262985,90262984,90262985,50,-,CTTGACCCGTTCTCTTCCTGGCATGCACATGCTCTGGCCCAGCAGGTACG,3' UTR,3,90254163,90264125,9963,1,Crtc2-201,8773,Crtc2-201;Crtc2-203;Crtc2-206;Crtc2-202;Crtc2-205;Crtc2-208;Crtc2-204;Crtc2-207;Dennd4b-202;Dennd4b-201;Dennd4b-207,Crtc2;Crtc2;Crtc2;Crtc2;Crtc2;Crtc2;Crtc2;Crtc2;Dennd4b;Dennd4b;Dennd4b,0;0;0;8612;0;0;4885;3971;-2200;-3529;-4476,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,1,5,74343,ENSMUSG00000027936,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg10187298,NA,NA,NA,NA,-0.813527037,NA,Dnajc22,Dnajc22_Promoter,15,99093629,99093678,99093629,99093630,50,-,CGCGGCCTTTATTAGGGATTCCGCGGCTGTCGGTCCCGCCATCCATCCTG,Promoter (<=1kb),15,99093170,99100917,7748,1,Dnajc22-202,459,Dnajc22-202,Dnajc22,0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,6,8,72778,ENSMUSG00000038009,conserved gene and region,15,99093593,99093959,367,*,367,36,0.697547684,0.811348563,0.098092643,2.41E-27,CpGisland,TRUE,BivProm1,
cg10196526,NA,0.04281146,NA,NA,NA,NA,Cadps,Cadps_Intron,14,12389021,12389070,12389069,12389070,50,-,CATGTTACAGGAAGCCACAGCTCGCCCCAGGGGTGCTGCAAACAGACACG,"Intron (Cadps-210/Cadps, intron 27 of 28)",14,12372563,12823053,450491,2,Cadps-210,433983,Cadps-210;Cadps-202;Cadps-203;Cadps-204;Cadps-201;Cadps-212;Cadps-208,Cadps;Cadps;Cadps;Cadps;Cadps;Cadps;Cadps,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,34,27062,ENSMUSG00000054423,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA18,
cg10198934,0.076775622,NA,NA,NA,NA,NA,Rhbdf2,Rhbdf2_Exon,11,116601885,116601934,116601933,116601934,50,+,TCACCGAGCTGGGGCCAACCCAGAAGTTCTCCTGCTGGATGTACTTCACG,"Exon (Rhbdf2-202/Rhbdf2, exon 11 of 19)",11,116598165,116624200,26036,2,Rhbdf2-202,22266,Aanat-204;Aanat-201;Aanat-205;Aanat-202;Rhbdf2-202;Rhbdf2-201;Rhbdf2-204;Rhbdf2-203,Aanat;Aanat;Aanat;Aanat;Rhbdf2;Rhbdf2;Rhbdf2;Rhbdf2,15453;8198;8198;6309;0;0;0;22313,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,2,217344,ENSMUSG00000020806,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg10202353,NA,0.03720957,NA,NA,NA,NA,Casz1,Casz1_Intron,4,148925142,148925191,148925190,148925191,50,+,TATCAGTAAATTATTTATTGTAGCAATCTGCTGCACCATTTTACCCATCG,"Intron (Casz1-201/Casz1, intron 4 of 15)",4,148804429,148945129,140701,1,Casz1-201,120713,Casz1-201;Casz1-202;Casz1-206,Casz1;Casz1;Casz1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk3,
cg10221809,NA,-0.022500051,NA,NA,NA,NA,Ttll11,Ttll11_Intergenic_upstream,2,36011609,36011658,36011657,36011658,50,+,ATCAGGGCCTTATTCATTAGCGCATAAACAATTTTGTTTCTCGGCACTCG,Distal Intergenic,2,35902351,35979913,77563,2,Ttll11-203,-31696,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,7,7,74410,ENSMUSG00000026885,mapped to different genes,2,36011629,36011763,135,*,135,19,0.644444444,1.364361702,0.140740741,7.09E-18,CpGisland,TRUE,,
cg10238356,0.168888696,NA,NA,NA,NA,NA,Lamp2,Lamp2_Exon,X,38405525,38405574,38405525,38405526,50,-,CGCTATGGGCACAAGGAAGTTGTCGTCATCTGCACTGCAGTCTTGAGCTA,"Exon (Lamp2-201/Lamp2, exon 9 of 9)",20,38401357,38456454,55098,2,Lamp2-203,50880,Lamp2-203;Lamp2-201,Lamp2;Lamp2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,16784,ENSMUSG00000016534,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg10241757,NA,NA,NA,NA,-1.676078883,-0.789045322,Cdk6,Cdk6_Promoter,5,3342421,3342470,3342421,3342422,50,-,CGGCTGCAGCCTTTGTAGTCGCGGAGGAATGCGGAAATGTTGAAGCACTA,Promoter (<=1kb),5,3341485,3344453,2969,1,Cdk6-205,936,Cdk6-205;Cdk6-204;Cdk6-202;Cdk6-203;Cdk6-201,Cdk6;Cdk6;Cdk6;Cdk6;Cdk6,0;-1262;0;-1446;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,1,2,12571,ENSMUSG00000040274,conserved gene and region,,,,,,,,,,,,,TRUE,PromF4,
cg10250869,NA,NA,NA,NA,-0.758174395,NA,Vwc2l,Vwc2l_fiveUTR,1,70725746,70725795,70725794,70725795,50,-,GGGCTCAGAAGCCAGTTGTTGGCGCTGTCCGTGGTGCTGAGGAATTCCCG,Promoter (<=1kb),1,70725752,70732202,6451,1,Vwc2l-202,0,Spag16-201;Spag16-204;Vwc2l-201;Vwc2l-202;Vwc2l-203;Vwc2l-204,Spag16;Spag16;Vwc2l;Vwc2l;Vwc2l;Vwc2l,898758;774125;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,6,320460,ENSMUSG00000045648,conserved gene and region,1,70725715,70725871,157,*,157,10,0.598726115,0.715914273,0.063694268,4.18E-06,CpGisland,TRUE,Dse1,
cg10277837,NA,0.19423341,NA,NA,NA,NA,Gm28308,Gm28308_fiveUTR,6,52191674,52191723,52191722,52191723,50,-,CGAGCTCATGGTCATTAATTTGTGAAGTGCAAAAATACTAATTTTTCTCG,5' UTR,6,52163359,52213339,49981,2,Gm28308-201,21616,Gm28308-201;Hoxa3-201;Hoxa4-201,Gm28308;Hoxa3;Hoxa4,0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,21,103,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,PromF5,
cg10405727,NA,0.13147413,NA,0.000125662,NA,NA,Gm4828,Gm4828_Intergenic_downstream,17,4907142,4907191,4907142,4907143,50,-,CGCTTAGAAATAGAAATGCATTTTCAATAAGTATTTATTATGTTGTTCTG,Distal Intergenic,17,4880626,4881115,490,1,Gm4828-201,26565,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,3,3,224460,NA,mapped to different genes,,,,,,,,,,,,,TRUE,PromF3,
cg10429476,0.201769353,NA,NA,NA,NA,NA,Itgb3,Itgb3_Exon,11,104633427,104633476,104633427,104633428,50,+,CGGCAGGTGGAGGATTACCCTGTGGACATCTACTACTTGATGGACCTGTC,"Exon (Itgb3-201/Itgb3, exon 4 of 15)",11,104608000,104670476,62477,1,Itgb3-201,25427,Itgb3-201;Itgb3-202,Itgb3;Itgb3,0;-3913,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,16416,ENSMUSG00000020689,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg10456584,-0.230695019,NA,NA,NA,NA,NA,Pcbp1,Pcbp1_Exon,6,86525412,86525461,86525460,86525461,50,-,CTCCAGCATGACCAGGCAAATCTGCTTGACACACTCGGTGACAGACTGCG,Promoter (<=1kb),6,86524492,86526321,1830,2,Pcbp1-201,860,Pcbp1-201,Pcbp1,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,14,15,23983,ENSMUSG00000051695,mapped to different genes,6,86525220,86525644,425,*,425,38,0.665882353,0.811965812,0.089411765,3.12E-27,CpGisland,TRUE,PromF4,
cg10530153,-0.266707035,NA,NA,NA,NA,NA,Gbf1,Gbf1_fiveUTR,19,46152508,46152557,46152508,46152509,50,+,CGCAGTTACCAGGCAGCGGGCTAGACTGAGGCTAGTTACCACGTCAGTGA,Promoter (<=1kb),19,46152509,46286510,134002,1,Gbf1-201,0,Gbf1-201;Gbf1-204;Gbf1-214;Gbf1-207;Gbf1-216;Pitx3-201,Gbf1;Gbf1;Gbf1;Gbf1;Gbf1;Pitx3,0;0;0;0;-23;-4182,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,18,107338,ENSMUSG00000025224,conserved gene but different region,19,46152414,46152595,182,*,182,13,0.582417582,0.842592593,0.071428571,2.16E-08,CpGisland,TRUE,PromF4,
cg10566829,0.40195633,NA,NA,NA,NA,NA,Sfmbt2,Sfmbt2_Exon,2,10373709,10373758,10373709,10373710,50,+,CGTGCCAGTTTCAATATGGCGGGCTAAGGTGGCTTTTAAAAACTGAAAAT,"Exon (Gm13261-201/Gm13261-201, exon 1 of 4)",2,10370510,10439137,68628,1,Sfmbt2-203,3199,Sfmbt2-203;Sfmbt2-202;Sfmbt2-206;Sfmbt2-204;Sfmbt2-205;Sfmbt2-207;Sfmbt2-201,Sfmbt2;Sfmbt2;Sfmbt2;Sfmbt2;Sfmbt2;Sfmbt2;Sfmbt2,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,353282,ENSMUSG00000061186,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF5,
cg10570730,NA,NA,NA,0.059138208,NA,NA,Zfp536,Zfp536_Intron,7,37532840,37532889,37532840,37532841,50,+,CGCTGCAGACCCACTCATTGAGTAAGAGCCAACAGCATATGATTGTGTTA,"Intron (Zfp536-211/Zfp536, intron 1 of 3)",7,37318024,37568390,250367,2,Zfp536-211,35501,Zfp536-211;Zfp536-202;Zfp536-201;Zfp536-203;Zfp536-206,Zfp536;Zfp536;Zfp536;Zfp536;Zfp536,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,73,112,243937,ENSMUSG00000043456,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm3,
cg10583293,0.043044543,NA,NA,NA,NA,NA,Nr2f2,Nr2f2_Intergenic_downstream,7,70123058,70123107,70123058,70123059,50,+,CGTCAGATTAAGCCCTTGCACAGAGAAGATATGAAAAGCATTTCTAATTA,Distal Intergenic,7,70353074,70355237,2164,2,Nr2f2-203,232130,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,19,69,11819,ENSMUSG00000030551,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC4,LINE
cg10587356,-1.565861533,NA,NA,NA,NA,NA,Dot1l,Dot1l_threeUTR,10,80778273,80778322,80778321,80778322,50,+,GTGAATAATTTTGCCTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCG,3' UTR,10,80755206,80795461,40256,1,Dot1l-201,23067,Dot1l-201;Dot1l-202;Dot1l-206,Dot1l;Dot1l;Dot1l,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,3,3,208266,ENSMUSG00000061589,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg10593080,NA,NA,NA,NA,-0.953210714,NA,Syt1,Syt1_fiveUTR,10,109010930,109010979,109010978,109010979,50,+,GAGCATCCCCACACTGCAGCTTCTCCAGGAATCCCTCCAGTGAGGAGGCG,Promoter (<=1kb),10,108497650,109010975,513326,2,Syt1-202,0,Syt1-202;Syt1-201;Syt1-206;Syt1-204;Syt1-203,Syt1;Syt1;Syt1;Syt1;Syt1,0;0;-1819;0;-1830,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,5,20979,ENSMUSG00000035864,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg10620616,NA,NA,NA,NA,-0.5978598,NA,Evx1,Evx1_Exon,6,52314794,52314843,52314794,52314795,50,+,CGCCAGGTCGGAAATGGTCCCAATGGTCTAATTGCCTTTGGTCTCCGGTT,"Exon (Evx1os-201/Evx1os-201, exon 1 of 4)",6,52313498,52318378,4881,1,Evx1-201,1296,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,19,14028,ENSMUSG00000005503,mapped to different genes,6,52314451,52314858,408,*,408,26,0.558823529,0.82392233,0.06372549,4.74E-15,CpGisland,TRUE,ReprPC1,
cg10651829,0.290033579,NA,NA,NA,NA,NA,Evx1,Evx1_fiveUTR,6,52313580,52313629,52313580,52313581,50,-,CGATTGCAGCAGGAGGATGACAGCTTAGAAAGAAGAGGGCAATGGGGCTT,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,82,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,7,19,14028,ENSMUSG00000005503,mapped to different genes,6,52313448,52313581,134,*,134,12,0.574626866,1.093877551,0.089552239,6.76E-09,CpGisland,TRUE,BivProm1,
cg10654522,NA,NA,NA,0.014513047,NA,NA,Gsx2,Gsx2_Intergenic_downstream,5,75082615,75082664,75082663,75082664,50,-,ACTAGTTTCAGATTAATGAAGCAGTGACAATTTCAATCTGCTTAAAGGCG,Distal Intergenic,5,75075602,75077625,2024,1,Gsx2-202,7062,Gsx2-201;Gsx2-202,Gsx2;Gsx2,7014;7013,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,5,10,14843,ENSMUSG00000035946,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg10711876,NA,NA,-0.160966408,NA,NA,NA,Calcoco1,Calcoco1_threeUTR,15,102707927,102707976,102707927,102707928,50,+,CGTCTGCTGCCTAATGAGGCTGAAAATGAGTCTGACATCGTCCTTCATCT,3' UTR,15,102706777,102722178,15402,2,Calcoco1-201,14202,Calcoco1-201;Calcoco1-203;Calcoco1-205;Calcoco1-204;Calcoco1-209;Calcoco1-207;Calcoco1-202;Calcoco1-206;Calcoco1-208,Calcoco1;Calcoco1;Calcoco1;Calcoco1;Calcoco1;Calcoco1;Calcoco1;Calcoco1;Calcoco1,0;0;0;0;2084;11740;7820;11740;6566,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,1,29,67488,ENSMUSG00000023055,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg10718356,NA,-0.027267997,NA,NA,NA,NA,Cbx4,Cbx4_Promoter,11,119085403,119085452,119085403,119085404,50,+,CGGTGGAGGGAAAGGGGAAAGGAGCCATTTTCTGCTGCACATCAGTCAGT,Promoter (<=1kb),11,119077573,119086221,8649,2,Cbx4-201,769,Cbx4-201;Cbx4-202,Cbx4;Cbx4,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,2,2,12418,ENSMUSG00000039989,conserved gene and region,,,,,,,,,,,,,TRUE,PromF4,
cg10724086,-0.200347449,NA,NA,NA,NA,NA,Foxa1,Foxa1_Exon,12,57546784,57546833,57546784,57546785,50,+,CGGCTAAGAGCAGGTGAGTCACAGCACCGGTTTATATCTTTATGACATAA,Promoter (<=1kb),12,57545834,57546916,1083,2,Foxa1-202,83,Foxa1-201;Foxa1-202,Foxa1;Foxa1,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,7,15375,ENSMUSG00000035451,mapped to different genes,12,57546636,57546961,326,*,326,19,0.54601227,0.782367058,0.058282209,1.74E-10,CpGisland,TRUE,BivProm1,
cg10732227,NA,NA,-0.14439104,NA,NA,NA,Brd1,Brd1_Exon,15,88712775,88712824,88712775,88712776,50,+,CGGTGTCCCTGGCATTGTACTTCATGCAGTTATCTATAATGAGATCAAAA,"Exon (Brd1-203/Brd1, exon 6 of 13)",15,88687034,88734233,47200,2,Brd1-203,21409,Brd1-203;Brd1-202;Brd1-201;Brd1-206;Brd1-204,Brd1;Brd1;Brd1;Brd1;Brd1,0;0;0;6331;4216,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,223770,ENSMUSG00000022387,conserved gene and region,15,88712636,88712776,141,*,141,10,0.659574468,0.674641148,0.070921986,1.60E-06,CpGisland,TRUE,Tx7,
cg10740273,NA,0.057344389,NA,NA,NA,NA,Fam120a,Fam120a_Exon,13,48910374,48910423,48910374,48910375,50,+,CGGAGGCAGGTCCTTGTTGGCTTCATCTTCAATAGAAACAGCAATTTTGA,"Exon (Fam120a-201/Fam120a, exon 10 of 18)",13,48879219,48968017,88799,2,Fam120a-201,57594,Fam120a-201,Fam120a,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,8,218236,ENSMUSG00000038014,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg10763467,NA,NA,0.076400798,NA,NA,NA,Evx2,Evx2_Intergenic_downstream,2,74651194,74651243,74651242,74651243,50,-,GCATTACTCGCAGTCAGCTAAATGAAACATTATTCTAAACATATGCATCG,Distal Intergenic,2,74655616,74659419,3804,2,Evx2-202,8225,Evx2-201;Evx2-202,Evx2;Evx2,0;8176,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,17,35,14029,ENSMUSG00000001815,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg10797933,-1.146870419,NA,NA,NA,NA,NA,Son,Son_Exon,16,91656300,91656349,91656348,91656349,50,+,CGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACG,"Exon (Son-203/Son, exon 3 of 12)",16,91647506,91679207,31702,1,Son-203,8794,Son-203;Son-204;Son-202;Son-208;Son-201;Son-205;Son-212,Son;Son;Son;Son;Son;Son;Son,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,31,20658,ENSMUSG00000022961,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg10823530,NA,-0.407470612,NA,NA,NA,NA,Prpf4b,Prpf4b_threeUTR,13,34901987,34902036,34901987,34901988,50,+,CGTTTTCCTAGGTGTGTGTGTGCAGGCCACAGCAGCATGCCCTTGGTGTA,3' UTR,13,34875302,34906064,30763,1,Prpf4b-201,26685,Prpf4b-201;Prpf4b-208;Prpf4b-202;Prpf4b-203;Prpf4b-210;Prpf4b-207;Prpf4b-204;Prpf4b-205;Prpf4b-209,Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b;Prpf4b,0;0;0;9863;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,4,4,19134,ENSMUSG00000021413,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg10866847,NA,-0.161282189,NA,NA,NA,NA,Ctdspl,Ctdspl_Exon,9,119031794,119031843,119031794,119031795,50,+,CGAAGGCCGTGGCCTCGTTCAAGTAATCCAGGATAGGCTGTGCAGGTCCC,"Exon (Mir26a-1-201/Mir26a-1-201, exon 1 of 1)",9,118926453,119043998,117546,1,Ctdspl-201,105341,Ctdspl-201;Ctdspl-202;Ctdspl-204;Ctdspl-203,Ctdspl;Ctdspl;Ctdspl;Ctdspl,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,7,69274,ENSMUSG00000047409,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg10918171,NA,-0.008074808,NA,-0.573890877,NA,NA,Dll1,Dll1_Promoter,17,15377007,15377056,15377055,15377056,50,+,ATTAAGGCAGCCTGTTATTGTGCGAGGCTGAATCAGTGGCTCTTTGTGCG,Promoter (<=1kb),17,15374794,15376872,2079,2,Dll1-205,-135,Dll1-201;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1,-1031;-2935;-1907;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg10918927,NA,NA,NA,NA,-0.686545797,NA,Hoxc5,Hoxc5_Exon,15,102998766,102998815,102998766,102998767,50,+,CGCTCGGTAAGTGTTTCCTTATTGGTTCAAATATGTAACTAATGGTCCGT,"Exon (Hoxc6-202/Hoxc6, exon 1 of 3)",15,102967443,103015676,48234,1,Hoxc5-202,31323,Hoxc5-202;Hoxc6-202;Hoxc6-203;Hoxc8-201;Hoxc8-202,Hoxc5;Hoxc6;Hoxc6;Hoxc8;Hoxc8,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,mapped to different genes,,,,,,,,,,,,,TRUE,,LTR
cg10974737,NA,NA,0.168482351,NA,NA,NA,Rbm39,Rbm39_threeUTR,2,156178858,156178907,156178858,156178859,50,-,CGATAAGTCACTCAATTACTACCTTATGATTGACAGTTCACACTGGAATC,3' UTR,2,156147239,156180238,33000,2,Rbm39-203,1331,Rbm39-203;Rbm39-217;Rbm39-215;Rbm39-201;Rbm39-225;Rbm39-223;Rbm39-204;Rbm39-216;Rbm39-213;Rbm39-214;Rbm39-218;Rbm39-219;Rbm39-210;Rbm39-224;Rbm39-212;Rbm39-202;Rbm39-208;Rbm39-222;Rbm39-205;Rbm39-211,Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39;Rbm39,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,11,13,170791,ENSMUSG00000027620,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF6,
cg10992228,NA,NA,NA,NA,0.093882989,NA,Dcakd,Dcakd_Intron,11,102998933,102998982,102998981,102998982,50,+,AACTGGGACTGTGGAAGCCACAGCTGTCGTCCTCATTTTTCACCTTATCG,"Intron (Dcakd-201/Dcakd, intron 3 of 4)",11,102994047,103017168,23122,2,Dcakd-201,18186,Dcakd-201;Dcakd-203;Dcakd-205,Dcakd;Dcakd;Dcakd,0;-1385;29322,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,4,68087,ENSMUSG00000020935,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg11039901,NA,NA,NA,NA,-1.651643411,NA,Gabrb2,Gabrb2_Exon,11,42602196,42602245,42602196,42602197,50,+,CGGACTACCAATTACGATTTCTCTCTGTATACGGTTAGATAGCCAGTTTT,"Exon (Gabrb2-205/Gabrb2, exon 9 of 10)",11,42419757,42629028,209272,1,Gabrb2-201,182439,Gabrb2-201;Gabrb2-205,Gabrb2;Gabrb2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,5,14401,ENSMUSG00000007653,conserved gene and region,,,,,,,,,,,,,TRUE,,LINE
cg11066411,NA,0.367422176,NA,NA,0.966854229,0.420603304,Faxc,Faxc_Exon,4,21931665,21931714,21931713,21931714,50,-,GCCCTTCTCCTTTTATGGGGACATCATCGCTTTCCCTTTGCAGGATTACG,Promoter (<=1kb),4,21931329,21994146,62818,1,Faxc-204,336,Faxc-204;Faxc-201;Faxc-202;Faxc-203,Faxc;Faxc;Faxc;Faxc,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,76132,ENSMUSG00000028246,conserved gene and region,4,21931002,21931985,984,*,984,98,0.706300813,0.798767457,0.099593496,4.26E-74,CpGisland,TRUE,PromF5,
cg11084334,NA,NA,NA,NA,1.10873943,0.147374218,Lhfpl4,Lhfpl4_Exon,6,113194076,113194125,113194124,113194125,50,+,TGTCGCCCACCCAGTAGGGCTGGATGAAGACCACCACGTTGATGATGGCG,"Exon (Lhfpl4-201/Lhfpl4, exon 2 of 4)",6,113168090,113195384,27295,2,Lhfpl4-201,1259,Lhfpl4-201;Lhfpl4-202,Lhfpl4;Lhfpl4,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,269788,ENSMUSG00000042873,conserved gene and region,6,113193884,113194365,482,*,482,42,0.668049793,0.8053467,0.087136929,1.49E-29,CpGisland,TRUE,BivProm2,
cg11115159,0.296914941,NA,NA,NA,NA,NA,Fgf8,Fgf8_Intron,19,45737793,45737842,45737793,45737794,50,+,CGAGGGGCTGGGCCTGCGGCTTACTGAACATTCCAAATGCTGGTACCATG,"Intron (Fgf8-201/Fgf8, intron 5 of 5)",19,45736798,45742874,6077,2,Fgf8-201,5032,Fgf8-201;Fgf8-206;Fgf8-202;Fgf8-205;Fgf8-203;Fgf8-204,Fgf8;Fgf8;Fgf8;Fgf8;Fgf8;Fgf8,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,4,18,14179,ENSMUSG00000025219,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC2,
cg11134207,NA,0.269937612,NA,NA,NA,NA,Acss2,Acss2_threeUTR,2,155561766,155561815,155561814,155561815,50,-,ATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACCCG,3' UTR,2,155517948,155562746,44799,1,Acss2-201,43818,Acss2-201;Acss2-202;Acss2-203;Acss2-205;Acss2-209;Gss-201;Gss-203;Gss-208;Gss-205,Acss2;Acss2;Acss2;Acss2;Acss2;Gss;Gss;Gss;Gss,0;0;0;0;12534;30995;30899;11189;12568,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,60525,ENSMUSG00000027605,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg11145593,NA,0.231869015,NA,NA,NA,NA,Mef2c,Mef2c_fiveUTR,13,83575651,83575700,83575651,83575652,50,+,CGAGAGAGAGAAGAAAAACGGGGACTATGGGGAGAAAAAAGATTCAGATT,Promoter (<=1kb),13,83575677,83662631,86955,1,Mef2c-219,0,Mef2c-218;Mef2c-228;Mef2c-221;Mef2c-229;Mef2c-201;Mef2c-202;Mef2c-207;Mef2c-231;Mef2c-222;Mef2c-223;Mef2c-227;Mef2c-217;Mef2c-213;Mef2c-214;Mef2c-215;Mef2c-226;Mef2c-216;Mef2c-208;Mef2c-206;Mef2c-212;Mef2c-210;Mef2c-203;Mef2c-205;Mef2c-224;Mef2c-204;Mef2c-219;Mef2c-225,Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c;Mef2c,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,9,41,17260,ENSMUSG00000005583,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA10,
cg11160926,-0.133866467,NA,NA,NA,NA,NA,Msantd1,Msantd1_Exon,5,34921380,34921429,34921428,34921429,50,-,TGGCTCTTGTGTCTCTCGTTTCAGGAAATTAAAATGCATGACAGATAGCG,"Exon (Msantd1-204/Msantd1, exon 3 of 4)",5,34915088,34923564,8477,1,Msantd1-204,6292,Msantd1-202;Msantd1-204;Msantd1-201;Msantd1-203,Msantd1;Msantd1;Msantd1;Msantd1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,4,403174,ENSMUSG00000051246,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg11168180,NA,NA,NA,-1.01946269,NA,NA,Egln1,Egln1_Exon,8,124914086,124914135,124914134,124914135,50,-,AATTTGGGTTCAATGTCAGCAAACTGGGCTTTGCCTTCTGGAAAAATTCG,"Exon (Egln1-201/Egln1, exon 3 of 5)",8,124908587,124949324,40738,2,Egln1-201,35189,Egln1-201,Egln1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,112405,ENSMUSG00000031987,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg11202178,NA,NA,-0.102125654,NA,NA,NA,Pcdh1,Pcdh1_threeUTR,18,38188282,38188331,38188330,38188331,50,-,AGCCCTCCCACCCCCTGAGATCAAGGCAATGGTGGTTTTACAGGCTGACG,3' UTR,18,38185914,38212053,26140,2,Pcdh1-203,23722,Pcdh1-203;Pcdh1-204,Pcdh1;Pcdh1,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,10,17,75599,ENSMUSG00000051375,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC7,
cg11209121,NA,NA,NA,NA,-0.02167803,NA,Nr4a2,Nr4a2_Exon,2,57112374,57112423,57112422,57112423,50,+,GTAGCTCTGAGAAGCGGGGCTGGCTCCTTGAGGCGAGGACCCATACTGCG,"Exon (Nr4a2-201/Nr4a2, exon 3 of 8)",2,57106830,57115038,8209,2,Nr4a2-201,2615,Nr4a2-201;Nr4a2-203;Nr4a2-206;Nr4a2-202;Nr4a2-205;Nr4a2-204,Nr4a2;Nr4a2;Nr4a2;Nr4a2;Nr4a2;Nr4a2,0;0;0;0;0;1950,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,10,25,18227,ENSMUSG00000026826,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg11218107,0.142359315,NA,NA,NA,NA,NA,Slc9a5,Slc9a5_Exon,8,105355873,105355922,105355921,105355922,50,-,GGGGCAGCCGTGGGCTTAGTCTTTGCCTTCCTCCTGGCCCTGACCACACG,"Exon (Slc9a5-201/Slc9a5, exon 5 of 16)",8,105348843,105368743,19901,1,Slc9a5-201,7030,Slc9a5-201;Slc9a5-202,Slc9a5;Slc9a5,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,277973,ENSMUSG00000014786,conserved gene and region,8,105355921,105356095,175,*,175,13,0.588571429,0.861742424,0.074285714,1.34E-08,CpGisland,TRUE,TxWk2,
cg11238308,NA,-0.017012709,NA,NA,NA,NA,Ankrd52,Ankrd52_Exon,10,128379471,128379520,128379471,128379472,50,+,CGGGCCACCAAGTGTGCTGAGGCTCTGGCACCCCTGTTGAGCAGCCTCAA,"Exon (Ankrd52-203/Ankrd52, exon 5 of 15)",10,128377115,128385496,8382,1,Ankrd52-203,2356,Ankrd52-203;Ankrd52-201,Ankrd52;Ankrd52,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,10,12,237615,ENSMUSG00000014498,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg11286097,0.141664377,NA,NA,NA,NA,NA,Tenm3,Tenm3_Exon,8,48228923,48228972,48228971,48228972,50,+,GATGGTGAAGTGCAGGTTCTCCAGGTAGAAGGCGTTGTTGAGCACGGCCG,"Exon (Tenm3-201/Tenm3, exon 29 of 29)",8,48227682,48674690,447009,2,Tenm3-201,445718,Tenm3-201;Tenm3-206,Tenm3;Tenm3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,39,23965,ENSMUSG00000031561,conserved gene and region,8,48228922,48229133,212,*,212,21,0.632075472,0.99197861,0.099056604,3.13E-16,CpGisland,TRUE,Acet1,
cg11311195,-0.51558885,NA,NA,NA,NA,NA,Taf4,Taf4_Exon,2,179975408,179975457,179975456,179975457,50,-,CTCACCTGGGGGCAGCTGGAAGTTCTGGATGTTGGTCGGGTTCTGAGGCG,"Exon (Taf4-201/Taf4, exon 1 of 15)",2,179912152,179976646,64495,2,Taf4-201,1189,Taf4-201;Taf4-204,Taf4;Taf4,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,228980,ENSMUSG00000039117,conserved gene and region,2,179975444,179977269,1826,*,1826,301,0.80558598,1.028030076,0.164841183,2.37E-303,CpGisland,TRUE,,
cg11438204,0.290388319,NA,NA,NA,NA,NA,Calu,Calu_Exon,6,29361318,29361367,29361318,29361319,50,-,CGACAAGGACGGGTTTGTCACTGTGGATGAGCTCAAAGACTGGATTAAAT,"Exon (Calu-208/Calu, exon 3 of 5)",6,29348069,29374503,26435,1,Calu-207,13249,Calu-207;Calu-208;Calu-206;Calu-201;Calu-202;Calu-209;Calu-204,Calu;Calu;Calu;Calu;Calu;Calu;Calu,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,9,12321,ENSMUSG00000029767,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg11439618,NA,NA,NA,NA,0.792297124,NA,Lgi2,Lgi2_Exon,5,52565963,52566012,52566011,52566012,50,-,CCCACGCAGATGATAGACTCCTTGGTACAGCTGCAAGTGGCGGGGCAGCG,Promoter (<=1kb),5,52533517,52566303,32787,2,Lgi2-202,291,Lgi2-202;Lgi2-201,Lgi2;Lgi2,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,246316,ENSMUSG00000039252,conserved gene and region,5,52565831,52566434,604,*,604,81,0.773178808,0.903623804,0.13410596,3.68E-73,CpGisland,TRUE,TSS2,
cg11448896,NA,NA,NA,NA,0.192757484,NA,Dmrta2,Dmrta2_Promoter,4,109977966,109978015,109977966,109977967,50,-,CGCCACATTGTTGTCCAATTCTGTCTAATGGAGCCCTAAGGACCAACAAT,Promoter (<=1kb),4,109978053,109983687,5635,1,Dmrta2-201,-87,Dmrta2-201,Dmrta2,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,7,13,242620,ENSMUSG00000047143,conserved gene and region,4,109977517,109977967,451,*,451,38,0.654101996,0.797709924,0.084257206,3.17E-26,CpGisland,TRUE,,
cg11452666,NA,NA,NA,NA,0.333844102,NA,Zfpm2,Zfpm2_Intron,15,40978768,40978817,40978816,40978817,50,-,GAGTAGCGCTGCAAGGTAGGTGATGTCTAGGTTTTTAATCTTCCACTCCG,"Intron (Zfpm2-201/Zfpm2, intron 5 of 7)",15,40655035,41104592,449558,1,Zfpm2-201,323733,Zfpm2-201;Zfpm2-203,Zfpm2;Zfpm2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,39,41,22762,ENSMUSG00000022306,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg11464058,NA,NA,0.149471989,NA,NA,NA,Pex14,Pex14_Intron,4,149061863,149061912,149061863,149061864,50,-,CGGAGCTCACTCTAGTGAGGATATAAACGCGCTGTGGGAATCTACAGATT,"Intron (Pex14-201/Pex14, intron 2 of 8)",4,148960535,149099876,139342,2,Pex14-201,37964,Pex14-201;Pex14-202;Pex14-205;Pex14-203;Pex14-204,Pex14;Pex14;Pex14;Pex14;Pex14,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,41,48,56273,ENSMUSG00000028975,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk6,
cg11477279,0.152097398,NA,NA,NA,NA,NA,Dmd,Dmd_Exon,X,83924933,83924982,83924933,83924934,50,+,CGAGAGGAAATAAAGATAAAACAGCAGCTGTTACAGACAAAACATAATGC,"Exon (Dmd-203/Dmd, exon 39 of 79)",20,82948903,85206141,2257239,1,Dmd-203,976030,Dmd-203;Dmd-215;Dmd-209,Dmd;Dmd;Dmd,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,20,28,13405,ENSMUSG00000045103,conserved gene and region,,,,,,,,,,,,,TRUE,Quies5,
cg11551173,NA,NA,NA,NA,0.510831837,NA,Ankfn1,Ankfn1_Intron,11,89662516,89662565,89662564,89662565,50,+,ATGGCCATGGCCAATCTCGTAGATTGGTACAAGTCCACATTTCCCAAACG,"Intron (Ankfn1-208/Ankfn1, intron 3 of 21)",11,89391238,89841266,450029,2,Ankfn1-208,178701,Ankfn1-208;Ankfn1-202;Ankfn1-205;Ankfn1-204,Ankfn1;Ankfn1;Ankfn1;Ankfn1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,8,15,382543,ENSMUSG00000047773,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA4,
cg11565438,NA,NA,NA,NA,-1.767458689,NA,Hmbox1,Hmbox1_Exon,14,64887562,64887611,64887610,64887611,50,-,CTTCAGCTCTTACCTGTTACCTGTGCAACAACTGCTTGGGAAATCCTCCG,"Exon (Hmbox1-201/Hmbox1, exon 4 of 11)",14,64811600,64949850,138251,2,Hmbox1-201,62239,Hmbox1-201;Hmbox1-202;Hmbox1-205;Hmbox1-209;Hmbox1-210;Hmbox1-203;Hmbox1-207;Hmbox1-204;Hmbox1-208,Hmbox1;Hmbox1;Hmbox1;Hmbox1;Hmbox1;Hmbox1;Hmbox1;Hmbox1;Hmbox1,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,8,219150,ENSMUSG00000021972,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg11614630,NA,NA,0.105324948,NA,NA,NA,Dll1,Dll1_Promoter,17,15378809,15378858,15378809,15378810,50,+,CGGGGAGACTGTTTAACTTCAGCGTTTCTATAGGAGCCTGTTGTAGTTTA,Promoter (1-2kb),17,15374794,15376872,2079,2,Dll1-205,-1937,Dll1-201;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1,-2833;-4737;-3709;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg11636414,NA,NA,NA,NA,-0.00161268,NA,Gm6411,Gm6411_Intron,13,83732212,83732261,83732212,83732213,50,-,CGTCTGTCAGGAGGGGACTATGAGAGGTTTGGGTGCAAATTCATTATCTC,"Intron (C130071C03Rik-201/C130071C03Rik-201, intron 1 of 3)",13,83761132,83762335,1204,2,Gm6411-201,30123,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,36,623241,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg11717789,-0.048926914,NA,NA,NA,NA,NA,Psmd11,Psmd11_threeUTR,11,80462606,80462655,80462654,80462655,50,+,TCTAGCCCAGAAGATGTCCAGGCTTTGGTGAGCGGGAAGCTTGCACTTCG,Promoter (<=1kb),11,80462611,80473248,10638,1,Psmd11-213,0,Psmd11-214;Psmd11-201;Psmd11-204;Psmd11-208;Psmd11-215;Psmd11-209;Psmd11-205;Psmd11-203;Psmd11-213;Psmd11-202,Psmd11;Psmd11;Psmd11;Psmd11;Psmd11;Psmd11;Psmd11;Psmd11;Psmd11;Psmd11,0;0;0;33941;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,4,4,69077,ENSMUSG00000017428,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg11735605,-1.086657936,NA,NA,NA,NA,NA,Ikzf2,Ikzf2_fiveUTR,1,69687142,69687191,69687142,69687143,50,+,CGTGTGTTTGTGCACTGCAGTTGGTGGTGGAAACTAAGGCAGTGGATCTG,Promoter (<=1kb),1,69538582,69687245,148664,2,Ikzf2-202,54,Ikzf2-201;Ikzf2-207;Ikzf2-202;Ikzf2-204;Ikzf2-208;Ikzf2-209;Ikzf2-206;Ikzf2-203;Ikzf2-205,Ikzf2;Ikzf2;Ikzf2;Ikzf2;Ikzf2;Ikzf2;Ikzf2;Ikzf2;Ikzf2,0;0;0;0;0;0;-1842;-2606;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,14,22779,ENSMUSG00000025997,conserved gene and region,,,,,,,,,,,,,TRUE,PromF4,
cg11742933,NA,NA,NA,NA,-0.11600325,-0.42091181,Apbb1,Apbb1_threeUTR,7,105565540,105565589,105565588,105565589,50,+,CAGATCTCATGCAGGCTGGTGGCGATGTTCTTGGCAGGTGCCTCACAGCG,3' UTR,7,105558483,105581653,23171,2,Apbb1-217,16064,Apbb1-217;Apbb1-209;Apbb1-215;Apbb1-212;Apbb1-219;Apbb1-201;Apbb1-208;Apbb1-214;Apbb1-213;Apbb1-205;Apbb1-221;Apbb1-218;Apbb1-202;Apbb1-210;Apbb1-207;Apbb1-206;Apbb1-220;Apbb1-204;Apbb1-203;Apbb1-216,Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1;Apbb1,0;0;0;0;0;0;0;0;0;0;0;-35;0;0;3374;3676;3682;3684;0;3081,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,8,11785,ENSMUSG00000037032,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh6,
cg11772199,NA,NA,NA,0.124297979,NA,NA,Gm11819,Gm11819_Intergenic_upstream,4,13298655,13298704,13298655,13298656,50,-,CGTTAGCTATTGTTTTGAAAATGACAGTATGGCCAATAATTTCAATTTCA,Distal Intergenic,4,13444770,13445141,372,1,Gm11819-201,-146115,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,19,22,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg11887895,NA,NA,NA,NA,-0.161833745,NA,Dlx5,Dlx5_fiveUTR,6,6882085,6882134,6882133,6882134,50,+,TGGCTGAGGCGCAGCACAGCCTTGGTTAAATCCTTAATTGCGCGCTTACG,Promoter (<=1kb),6,6877805,6882085,4281,2,Dlx5-201,0,Dlx5-202;Dlx5-201;Dlx5-203,Dlx5;Dlx5;Dlx5,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,6,13395,ENSMUSG00000029755,conserved gene and region,6,6881983,6882197,215,*,215,16,0.655813953,0.763087844,0.074418605,1.72E-10,CpGisland,TRUE,,
cg11926564,NA,NA,NA,NA,-0.152619034,NA,Nlgn1,Nlgn1_Exon,3,25433846,25433895,25433846,25433847,50,-,CGAAGAACCACCTCATGTGGATGAATGGACTCACATTCATGATCCAAATC,"Exon (Nlgn1-205/Nlgn1, exon 8 of 8)",3,25426215,26332460,906246,2,Nlgn1-205,898565,Nlgn1-205;Nlgn1-201;Nlgn1-202;Nlgn1-203,Nlgn1;Nlgn1;Nlgn1;Nlgn1,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,7,192167,ENSMUSG00000063887,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg11948733,NA,NA,-0.093467267,NA,NA,NA,Ypel3,Ypel3_fiveUTR,7,126777833,126777882,126777833,126777834,50,+,CGCCATGGTGCGGATTTCAAAGCCCAAGACGTTTCAGGCCTACTTGGATG,Promoter (<=1kb),7,126776955,126780514,3560,1,Ypel3-201,878,Gdpd3-201;Gdpd3-203;Tbx6-202;Tbx6-201;Ypel3-201;Ypel3-210;Ypel3-204;Ypel3-209;Ypel3-211;Ypel3-203;Ypel3-207;Ypel3-205;Ypel3-202;Ypel3-208;Ypel3-206,Gdpd3;Gdpd3;Tbx6;Tbx6;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3,11499;9313;-3601;-3601;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,2,4,66090,ENSMUSG00000042675,conserved gene and region,7,126777793,126777939,147,*,147,11,0.653061224,0.70952172,0.074829932,2.27E-07,CpGisland,TRUE,PromF2,
cg11967831,NA,NA,-0.133347441,NA,NA,NA,Phox2b,Phox2b_Promoter,5,67100396,67100445,67100396,67100397,50,+,CGTGTGGTGTAAACAAACCCTGGATATTTTATATGAATTAAATGTGTAGA,Promoter (1-2kb),5,67094399,67099301,4903,2,Phox2b-201,-1095,Phox2b-201;Phox2b-202,Phox2b;Phox2b,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,28,18935,ENSMUSG00000012520,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg12026817,-0.014283163,NA,NA,NA,NA,NA,Dpyd,Dpyd_Exon,3,118433906,118433955,118433954,118433955,50,+,GCTTAAGAATACGCGTAGTCGAGGAGAGTACCAGCGGCAGGGGGGCAGCG,"Exon (Gm26871-202/Gm26871-202, exon 3 of 3)",3,118562129,119432924,870796,1,Dpyd-201,-128174,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,29,99586,ENSMUSG00000033308,mapped to different genes,3,118433691,118434190,500,*,500,37,0.624,0.795801609,0.074,1.85E-23,CpGisland,TRUE,BivProm1,
cg12030043,NA,NA,NA,NA,-0.129551299,NA,Sox14,Sox14_Exon,9,99874976,99875025,99874976,99874977,50,+,CGTGGGCTGACGAATAAGGGTCTATGCCAGTCTTGGTCATGCCTGGGAAG,"Exon (Sox14-201/Sox14, exon 1 of 1)",9,99874106,99876170,2065,2,Sox14-201,1145,Sox14-201;Sox14-202,Sox14;Sox14,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,18,20669,ENSMUSG00000053747,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg12036377,NA,NA,NA,0.051557496,NA,NA,C1ql3,C1ql3_fiveUTR,2,13011697,13011746,13011697,13011698,50,+,CGGAGCAATTTATAGGCACCCAAGGCACAGAGGAAGGGGAGCCGCTTTGG,Promoter (<=1kb),2,13003457,13011806,8350,2,C1ql3-201,60,C1ql3-201,C1ql3,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,9,227580,ENSMUSG00000049630,conserved gene but different region,2,13011690,13011698,9,*,9,4,1,1.8,0.444444444,2.24E-06,CpGisland,TRUE,BivProm1,
cg12045717,NA,NA,NA,NA,-0.107690041,NA,Gsx2,Gsx2_Promoter,5,75071761,75071810,75071809,75071810,50,-,GATCTTTGTTCTTTTCCACTATTATTGAGGACTTTCTTGAAGACTAAGCG,Promoter (3-4kb),5,75075601,75077893,2293,1,Gsx2-201,-3840,Gsx2-201;Gsx2-202,Gsx2;Gsx2,-3791;-3792,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,5,10,14843,ENSMUSG00000035946,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg12052770,NA,NA,NA,-0.344749803,NA,NA,Wdtc1,Wdtc1_Intron,4,133299890,133299939,133299938,133299939,50,-,GGCACACCAGCTGGCCTGTCTGTCTGGGCAGAGCCGACGGATGCCAGACG,"Intron (Wdtc1-201/Wdtc1, intron 12 of 15)",4,133292459,133339324,46866,2,Wdtc1-201,39385,Wdtc1-201;Wdtc1-202,Wdtc1;Wdtc1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,3,230796,ENSMUSG00000037622,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg12056279,NA,NA,NA,NA,-0.331683584,NA,Hoxa11,Hoxa11_Exon,6,52245461,52245510,52245509,52245510,50,+,CCGCGGAGTAGCAGTGGGCCAGATTGCCGCGGGGGTGCCATTTAGTGGCG,Promoter (<=1kb),6,52242106,52245810,3705,2,Hoxa11-201,300,Hoxa10-201;Hoxa10-204;Hoxa11-201;Hoxa11-202,Hoxa10;Hoxa10;Hoxa11;Hoxa11,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,15,18,15396,ENSMUSG00000038210,mapped to different genes,6,52244948,52245549,602,*,602,70,0.674418605,1.022616968,0.11627907,2.62E-58,CpGisland,TRUE,BivProm1,
cg12073704,NA,-0.005594292,NA,NA,NA,NA,Dglucy,Dglucy_Exon,12,100878553,100878602,100878601,100878602,50,-,TAGGGCAGGAAGCAGGCCAGGAAGATGACCACGGTGCTGAGCACCAGCCG,"Exon (Gpr68-203/Gpr68, exon 3 of 3)",12,100779086,100896981,117896,1,Dglucy-203,99467,Dglucy-203;Dglucy-205;Gpr68-203;Gpr68-201;Gpr68-202;Gpr68-206,Dglucy;Dglucy;Gpr68;Gpr68;Gpr68;Gpr68,0;11364;0;0;0;20896,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,217830,ENSMUSG00000021185,mapped to different genes,12,100878532,100878656,125,*,125,9,0.632,0.723938224,0.072,5.84E-06,CpGisland,TRUE,Acet1,
cg12076803,NA,0.044899607,NA,NA,NA,NA,Plxnc1,Plxnc1_threeUTR,10,94792943,94792992,94792991,94792992,50,-,AGGCTGTTTGCAACAACCACTTCAACTCTATTTACAGAAGGGTTCCCACG,3' UTR,10,94790866,94944835,153970,2,Plxnc1-201,151843,Cep83-201;Cep83-202;Plxnc1-201,Cep83;Cep83;Plxnc1,104289;52859;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,5,54712,ENSMUSG00000074785,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA19,
cg12135913,-0.134475133,NA,NA,NA,NA,NA,Pcdh17,Pcdh17_fiveUTR,14,84444773,84444822,84444821,84444822,50,-,GCACTTGACAGCCCAGCCCTGTGAATGCAGAGACTGTTTCCCTTCTAGCG,5' UTR,14,84443563,84539002,95440,1,Pcdh17-201,1210,Pcdh17-201;Pcdh17-202,Pcdh17;Pcdh17,0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,13,219228,ENSMUSG00000035566,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg12185545,NA,-0.026204694,NA,NA,NA,NA,Uncx,Uncx_Intergenic_downstream,5,139599906,139599955,139599954,139599955,50,-,GTTCCACTCCAGTGCCCTCCCCAATAAAACTTTTCATATCCTTATAAACG,Distal Intergenic,5,139543898,139545268,1371,1,Uncx-202,56057,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,59,88,22255,ENSMUSG00000029546,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC2,
cg12220493,NA,NA,0.380637033,NA,1.386639531,NA,Nkx2-1,Nkx2-1_fiveUTR,12,56536690,56536739,56536690,56536691,50,-,CGCTGGATATTAGTAGATGAGGATCATTCTGCTTCAATTGGGCGCCTCTC,Promoter (<=1kb),12,56531958,56536908,4951,2,Nkx2-1-201,169,Nkx2-1-202;Nkx2-1-201,Nkx2-1;Nkx2-1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,6,29,21869,ENSMUSG00000001496,mapped to different genes,12,56536346,56536691,346,*,346,28,0.61849711,0.84618744,0.080924855,5.59E-19,CpGisland,TRUE,BivProm2,
cg12247042,-0.127478039,NA,NA,NA,NA,NA,Dnajb5,Dnajb5_Exon,4,42956669,42956718,42956669,42956670,50,+,CGGCCCTTCAGTGGCTTTGACCCAGATGACATGGATGTGGATGAAGATGA,"Exon (Dnajb5-201/Dnajb5, exon 4 of 5)",4,42949814,42959425,9612,1,Dnajb5-201,6855,Dnajb5-201;Dnajb5-203;Dnajb5-206;Dnajb5-202;Dnajb5-207;Dnajb5-204,Dnajb5;Dnajb5;Dnajb5;Dnajb5;Dnajb5;Dnajb5,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,8,56323,ENSMUSG00000036052,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg12264936,NA,-0.082695412,NA,NA,NA,NA,Kazald1,Kazald1_Intron,19,45104826,45104875,45104874,45104875,50,-,TGATTCAGGCATCAGATGGGCCGACAGCCAGAGATTAATTCAACTGATCG,"Intron (Gm35867-203/Gm35867-203, intron 2 of 4)",19,45076139,45079289,3151,1,Kazald1-201,28736,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,8,107250,ENSMUSG00000025213,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC2,
cg12277614,2.37E-05,NA,1.14689173,NA,NA,NA,Psmd14,Psmd14_Exon,2,61761052,61761101,61761052,61761053,50,-,CGTCAGAGTGATTGATGTGTTTGCTATGCCACAGTCAGGAACAGTGAGTA,"Exon (Psmd14-201/Psmd14, exon 5 of 12)",2,61711694,61800376,88683,1,Psmd14-201,49358,Psmd14-201;Psmd14-206;Psmd14-207;Psmd14-208,Psmd14;Psmd14;Psmd14;Psmd14,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,9,59029,ENSMUSG00000026914,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg12285520,-0.248048892,NA,NA,NA,NA,NA,Mecom,Mecom_Intron,3,30106626,30106675,30106626,30106627,50,+,CGGGCGATCCTCCGACTGCTCGGCGCCAACCACAACATGCTACCCACCGT,"Intron (Mecom-212/Mecom, intron 1 of 15)",3,29951299,30509733,558435,2,Mecom-212,403058,Mecom-212;Mecom-203;Mecom-210;Mecom-213;Mecom-207;Mecom-208;Mecom-211,Mecom;Mecom;Mecom;Mecom;Mecom;Mecom;Mecom,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,57,80,14013,ENSMUSG00000027684,conserved gene and region,3,30106598,30106734,137,*,137,14,0.613138686,1.097254005,0.102189781,3.95E-11,CpGisland,TRUE,PromF5,
cg12307242,0.003127744,NA,NA,NA,NA,0.003438067,Cadps2,Cadps2_Intron,6,23272710,23272759,23272758,23272759,50,-,TCACACTTATTGTGCATGACTGTAGACTGGTAAATCATATTAGCAGCCCG,"Intron (Cadps2-213/Cadps2, intron 28 of 29)",6,23262773,23839137,576365,2,Cadps2-213,566378,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-211;Cadps2-207;Cadps2-202;Cadps2-210,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg12309991,NA,0.166622107,NA,NA,NA,NA,Zeb2,Zeb2_fiveUTR,2,45113194,45113243,45113194,45113195,50,+,CGCCAAGTTTCTCTCTGGGAAAGGATCTGGGATAGATTATACCTTGAAGT,Promoter (<=1kb),2,45104038,45113216,9179,2,Zeb2-205,0,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-216;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219;Zeb2-211;Zeb2-210;Zeb2-205;Zeb2-223;Zeb2-217;Zeb2-225;Zeb2-204;Zeb2-206;Zeb2-230,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-3118;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,15,158,24136,ENSMUSG00000026872,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg12321152,NA,NA,NA,NA,-0.436526974,NA,Cnot9,Cnot9_Exon,1,74528774,74528823,74528774,74528775,50,+,CGCTGGCTTGCACAACTGGTGAAGAACCTGCAAGAGGGCCAGGTCACCGA,"Exon (Cnot9-201/Cnot9, exon 8 of 8)",1,74506058,74530842,24785,1,Cnot9-201,22716,Cnot9-201;Cnot9-202;Cnot9-203;Usp37-205,Cnot9;Cnot9;Cnot9;Usp37,0;22714;5247;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,58184,ENSMUSG00000026174,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg12348962,NA,NA,NA,0.107224862,NA,NA,Epha5,Epha5_Exon,5,84233852,84233901,84233900,84233901,50,+,ATCCATTCCAGAAAGACACTAGTTTCATTAACATTTGAGATGGCATTCCG,"Exon (Epha5-205/Epha5, exon 5 of 18)",5,84054761,84416921,362161,2,Epha5-201,183020,Epha5-201;Epha5-205;Epha5-206;Epha5-202;Epha5-203;Epha5-204;Epha5-209;Epha5-208;Epha5-210,Epha5;Epha5;Epha5;Epha5;Epha5;Epha5;Epha5;Epha5;Epha5,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,9,13839,ENSMUSG00000029245,conserved gene and region,,,,,,,,,,,,,TRUE,Quies1,
cg12373771,NA,NA,NA,NA,0.169462092,NA,Tmem121b,Tmem121b_Exon,6,120493082,120493131,120493130,120493131,50,-,AGCACCAGTACAGGTCGGTGACGGCGATGAGGTACAGGTCCAGCAGGCCG,Promoter (<=1kb),6,120488939,120493807,4869,2,Tmem121b-201,676,Tmem121b-201,Tmem121b,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,94047,ENSMUSG00000094626,conserved gene and region,6,120493130,120494085,956,*,956,120,0.767782427,0.865942029,0.125523013,4.48E-104,CpGisland,TRUE,BivProm1,
cg12386526,NA,NA,NA,-0.000659139,NA,NA,Setd5,Setd5_Exon,6,113110654,113110703,113110654,113110655,50,-,CGAATTCTCTGCACTAGGTGAGAATTGCTGACAACAAGGAATGAGAGATT,"Exon (Setd5-204/Setd5, exon 1 of 6)",6,113077365,113153435,76071,1,Setd5-201,33289,Setd5-209;Setd5-201;Setd5-206;Setd5-205;Setd5-203;Setd5-212;Setd5-202;Setd5-204;Setd5-210;Setd5-214;Setd5-207,Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,19,72895,ENSMUSG00000034269,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx1,
cg12407846,NA,NA,NA,-0.037265781,NA,NA,Setbp1,Setbp1_Intron,18,78792442,78792491,78792442,78792443,50,+,CGATAGTGATGAACTCCCAGCTAATAAACACAGAGTGCTTATTTCGGCAG,"Intron (Setbp1-201/Setbp1, intron 4 of 5)",18,78750380,79109391,359012,2,Setbp1-201,316900,Setbp1-201,Setbp1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,9,240427,ENSMUSG00000024548,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg12476049,0.443229245,NA,NA,NA,NA,NA,D430041D05Rik,D430041D05Rik_Exon,2,104208172,104208221,104208172,104208173,50,+,CGTTGCTGATGACAGAGCCATTCTCACTGGGCGACCTGCTGGAGGTAACC,"Exon (D430041D05Rik-201/D430041D05Rik, exon 13 of 21)",2,104143073,104410334,267262,2,D430041D05Rik-201,202113,D430041D05Rik-201;D430041D05Rik-202;D430041D05Rik-203;D430041D05Rik-207;D430041D05Rik-206;D430041D05Rik-204,D430041D05Rik;D430041D05Rik;D430041D05Rik;D430041D05Rik;D430041D05Rik;D430041D05Rik,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,241589,ENSMUSG00000068373,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg12564910,NA,NA,0.042008334,NA,NA,NA,Socs3,Socs3_Exon,11,117968122,117968171,117968122,117968123,50,+,CGTTCACCACCAGCTGGTACTCGCTCTTGGAGCTGAAGGTCTTGAGGCGC,"Exon (Socs3-201/Socs3, exon 2 of 2)",11,117966079,117969186,3108,2,Socs3-201,1015,Socs3-201;Socs3-202;Socs3-203,Socs3;Socs3;Socs3,0;1876;1280,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,9,12702,ENSMUSG00000053113,conserved gene and region,11,117967759,117969258,1500,*,1500,136,0.671333333,0.805559943,0.090666667,1.37E-96,CpGisland,TRUE,PromF3,
cg12613764,NA,0.0108867,NA,NA,NA,NA,Gm11819,Gm11819_Intergenic_upstream,4,13408477,13408526,13408477,13408478,50,-,CGCAGCATTTGACAGATTGGGCAGAACTGCCACGAAAGAGTCTGACACAG,Distal Intergenic,4,13444770,13445141,372,1,Gm11819-201,-36293,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,19,22,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Acet4,
cg12657315,0.010093977,NA,NA,NA,NA,NA,Trio,Trio_threeUTR,15,27744050,27744099,27744050,27744051,50,-,CGGCTCGGAACACCAGAAACATGTTCTGCTGGTTGCTGGCCAGAATTTGA,3' UTR,15,27730651,28025848,295198,2,Trio-201,281749,Trio-212;Trio-201;Trio-208;Trio-206;Trio-214;Trio-211;Trio-205,Trio;Trio;Trio;Trio;Trio;Trio;Trio,-1727;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,8,11,223435,ENSMUSG00000022263,conserved gene and region,15,27743899,27744056,158,*,158,12,0.64556962,0.736024845,0.075949367,4.47E-08,CpGisland,TRUE,,
cg12704157,NA,NA,NA,NA,-0.002349888,NA,Pax2,Pax2_Intergenic_upstream,19,44670437,44670486,44670485,44670486,50,+,CCTCCGGTTCCCATGTTGTCGAGGCATGCTGGGAGTACAAGTTCCGAGCG,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-85559,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,19,44670410,44670516,107,*,107,13,0.672897196,1.074131274,0.121495327,2.26E-11,CpGisland,TRUE,BivProm2,
cg12762301,NA,NA,NA,-0.144236197,NA,NA,Crebrf,Crebrf_threeUTR,17,26772297,26772346,26772297,26772298,50,-,CGATTGTTTTATTTTTTGTACCAAAGACAAATGCAACTGATATGGCAAAC,3' UTR,17,26715650,26776635,60986,1,Crebrf-201,56647,Crebrf-201,Crebrf,0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,5,77128,ENSMUSG00000048249,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg12790413,-0.262095981,NA,NA,NA,NA,NA,Rprd1b,Rprd1b_Intron,2,158060022,158060071,158060070,158060071,50,-,CTGATCTGTCAGACATTGATTATCATGAGCAGCTGTTGTTGGGTAGAACG,"Intron (Rprd1b-202/Rprd1b, intron 6 of 6)",2,158028497,158078207,49711,1,Rprd1b-202,31525,Rprd1b-202;Rprd1b-208;Rprd1b-203;Rprd1b-201;Rprd1b-207;Rprd1b-205;Rprd1b-206,Rprd1b;Rprd1b;Rprd1b;Rprd1b;Rprd1b;Rprd1b;Rprd1b,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,70470,ENSMUSG00000027651,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg12818000,NA,NA,NA,NA,0.596951053,NA,Hand2,Hand2_Exon,8,57353962,57354011,57353962,57353963,50,-,CGGAATGTCCTGTGTGCCACATGGAGCTTGGGGAAAGGAAATGATTAAAG,"Exon (5033428I22Rik-203/5033428I22Rik-203, exon 3 of 3)",8,57320983,57324633,3651,1,Hand2-201,33028,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,9,15111,ENSMUSG00000038193,mapped to different genes,,,,,,,,,,,,,TRUE,PromF5,
cg12837065,-0.002562756,NA,NA,NA,NA,NA,Zbtb20,Zbtb20_Intron,16,43502732,43502781,43502732,43502733,50,-,CGGCATCTGACTGTACCTGTCTTGTTCTCTGCAGCATCTGTCTGCTACAC,"Intron (Zbtb20-211/Zbtb20, intron 4 of 4)",16,42907542,43569781,662240,1,Zbtb20-211,595190,Zbtb20-211;Zbtb20-217;Zbtb20-204;Zbtb20-215;Zbtb20-201;Zbtb20-203;Zbtb20-214;Zbtb20-213;Zbtb20-219;Zbtb20-216;Zbtb20-208;Zbtb20-207;Zbtb20-220;Zbtb20-206,Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20,0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,64,98,56490,ENSMUSG00000022708,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh7,
cg12841266,0.56665805,NA,2.197476407,0.665175384,0.308755737,0.002083376,Lhfpl4,Lhfpl4_Exon,6,113193905,113193954,113193953,113193954,50,-,GGATCAGCACCATGGAGAGCAGCACGAAGAAGGCGGCCGCCTTGAAGGCG,Promoter (<=1kb),6,113175395,113193943,18549,2,Lhfpl4-202,0,Lhfpl4-201;Lhfpl4-202,Lhfpl4;Lhfpl4,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,269788,ENSMUSG00000042873,conserved gene and region,6,113193884,113194365,482,*,482,42,0.668049793,0.8053467,0.087136929,1.49E-29,CpGisland,TRUE,BivProm2,
cg12879445,NA,1.148193933,NA,NA,NA,NA,Unc79,Unc79_fiveUTR,12,102949540,102949589,102949588,102949589,50,-,AACTGGACAGCACCATGTCCACCAAAGCGGAGCAGTGTAAGTAGCAGCCG,Promoter (<=1kb),12,102949554,103183613,234060,1,Unc79-208,0,Unc79-202;Unc79-208,Unc79;Unc79,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,12,24,217843,ENSMUSG00000021198,conserved gene and region,12,102949567,102949769,203,*,203,20,0.738916256,0.848662207,0.098522167,1.99E-15,CpGisland,TRUE,TSS2,
cg12899502,NA,NA,NA,NA,-0.415799037,NA,Pax6,Pax6_Intron,2,105690034,105690083,105690082,105690083,50,-,TAACACAATGTGGCCCGCTGCACGCCTCAAGAGAATCCTTTTGTTGTCCG,"Intron (Pax6-206/Pax6, intron 7 of 12)",2,105668900,105697364,28465,1,Pax6-206,21134,Pax6-206;Pax6-207;Pax6-210;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-216;Pax6-218,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-2400,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,78,18508,ENSMUSG00000027168,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg12923877,0.349276988,NA,NA,NA,NA,NA,Srsf11,Srsf11_Exon,3,158024665,158024714,158024713,158024714,50,-,CTACAATTTAAAAATAGCAATGAGGCCCCTCACCAGTTAATTTTCATGCG,"Exon (Srsf11-203/Srsf11, exon 4 of 5)",3,158010473,158036639,26167,2,Srsf11-204,11925,Srsf11-204;Srsf11-213;Srsf11-202;Srsf11-207;Srsf11-201;Srsf11-217;Srsf11-218;Srsf11-206;Srsf11-209;Srsf11-210;Srsf11-212;Srsf11-203;Srsf11-208;Srsf11-215,Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11,0;0;0;-1525;0;-2661;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,8,69207,ENSMUSG00000055436,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg12931701,NA,NA,NA,NA,0.131884237,0.51527845,Crim1,Crim1_Exon,17,78279975,78280024,78280023,78280024,50,-,GAGAAGCCAGATTGCTCCAAGGCCCGCTGTGAAGTCCAGTTCTCTCCACG,"Exon (Crim1-201/Crim1, exon 3 of 17)",17,78200248,78376592,176345,1,Crim1-201,79727,Crim1-201;Crim1-204;Crim1-205;Crim1-206;Crim1-202,Crim1;Crim1;Crim1;Crim1;Crim1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,5,50766,ENSMUSG00000024074,conserved gene and region,17,78279999,78280123,125,*,125,10,0.632,0.802310655,0.08,5.31E-07,CpGisland,TRUE,TxEnh8,
cg12959926,0.06565062,NA,NA,NA,NA,NA,Tmem63b,Tmem63b_Exon,17,45662861,45662910,45662909,45662910,50,-,ACCGAAGGGCACGATGATGGGGCAGGTGATACTGTAGGTCATGACCACCG,"Exon (Tmem63b-201/Tmem63b, exon 20 of 24)",17,45660171,45686259,26089,2,Tmem63b-201,23349,Capn11-201;Capn11-202;Tmem63b-201;Tmem63b-208;Tmem63b-203;Tmem63b-207,Capn11;Capn11;Tmem63b;Tmem63b;Tmem63b;Tmem63b,-3536;-3564;0;0;3544;23063,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,12,224807,ENSMUSG00000036026,conserved gene and region,17,45662805,45662957,153,*,153,13,0.647058824,0.81583265,0.08496732,2.55E-09,CpGisland,TRUE,TxEnh5,
cg12981876,NA,-0.068781962,NA,NA,NA,NA,Epo,Epo_Exon,5,137525234,137525283,137525234,137525235,50,+,CGTTCCTGCCTGGGGGACACGCTGGAAGCCAAAGAATTTGCCAAACAATT,"Exon (Gigyf1-201/Gigyf1, exon 22 of 24)",5,137483020,137533242,50223,2,Epo-202,7959,Epo-202;Gigyf1-202;Gigyf1-201;Gnb2-201;Gnb2-213;Gnb2-209;Gnb2-203;Gnb2-204;Gnb2-202;Gnb2-212;Gnb2-214;Gnb2-215;Gnb2-208;Gnb2-205;Gnb2-210;Gnb2-211;Gnb2-206;Gnb2-207,Epo;Gigyf1;Gigyf1;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2;Gnb2,0;6686;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,9,13856,ENSMUSG00000029711,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh4,
cg12997720,NA,NA,NA,NA,-1.51306628,NA,Hoxa11,Hoxa11_Exon,6,52245967,52246016,52246015,52246016,50,+,GGCTTCCTTTCTTTGTAGCCACCTCAGGGGAAGCAACAGATCGTCACTCG,Promoter (<=1kb),6,52242106,52245810,3705,2,Hoxa11-201,-157,Hoxa11-201;Hoxa11-202,Hoxa11;Hoxa11,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,18,15396,ENSMUSG00000038210,mapped to different genes,6,52246008,52246200,193,*,193,16,0.658031088,0.771614193,0.082901554,3.24E-11,CpGisland,TRUE,BivProm1,
cg13000461,NA,0.445207723,NA,NA,NA,NA,Srgap2,Srgap2_Exon,1,131296331,131296380,131296379,131296380,50,-,TGCAAGATAAATATCGGCTACATGACCCCCACTGGGACAGCTGGCCCCCG,Promoter (<=1kb),1,131295756,131296380,625,2,Srgap2-208,0,Srgap2-201;Srgap2-205;Srgap2-212;Srgap2-204;Srgap2-210;Srgap2-209;Srgap2-208;Srgap2-203,Srgap2;Srgap2;Srgap2;Srgap2;Srgap2;Srgap2;Srgap2;Srgap2,0;0;0;0;0;0;0;67684,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,14270,ENSMUSG00000026425,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg13007617,NA,NA,NA,0.041594133,NA,NA,Gm45623,Gm45623_Promoter,13,56757203,56757252,56757203,56757204,50,+,CGGGCAGGAAATTAAACAAGGCTGGTACTGAGTAAATGCAGAGATGAAGT,Promoter (3-4kb),13,56752371,56753827,1457,2,Gm45623-201,-3376,Gm45623-201,Gm45623,-3376,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,1,1,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg13024380,NA,NA,0.005857431,NA,NA,NA,Msl2,Msl2_Exon,9,101101818,101101867,101101866,101101867,50,-,TGTGGGCGTGCTACTCAAAATCCAAGTGTTCTTACATGCCGAGGCCAACG,"Exon (Msl2-201/Msl2, exon 2 of 2)",9,101074762,101104800,30039,1,Msl2-201,27056,Msl2-202;Msl2-201;Ppp2r3a-202;Ppp2r3a-201,Msl2;Msl2;Ppp2r3a;Ppp2r3a,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,Exon,12,19,77853,ENSMUSG00000066415,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg13028279,0.080298556,NA,NA,NA,NA,NA,Smug1,Smug1_Promoter,15,103169185,103169234,103169185,103169186,50,+,CGCTGCCCTCCCCATGAACCTGCCTTTAATACTGAGGAAGTTATGAAACC,Promoter (2-3kb),15,103153290,103167092,13803,2,Smug1-202,-2093,Smug1-202;Smug1-205,Smug1;Smug1,-2093;-3669,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,2,12,71726,ENSMUSG00000036061,conserved gene and region,15,103168915,103169374,460,*,460,54,0.693478261,1,0.117391304,2.35E-45,CpGisland,TRUE,,
cg13057591,NA,NA,NA,NA,-0.436247374,NA,Bend5,Bend5_fiveUTR,4,111415168,111415217,111415216,111415217,50,-,GCCCACCATGTACGCCTTTGTGCGGTTCCTGGAGGACAACGTCTGCTACG,Promoter (<=1kb),4,111415207,111420538,5332,1,Bend5-205,0,Agbl4-205;Agbl4-206;Agbl4-201;Agbl4-202;Agbl4-209;Bend5-201;Bend5-204;Bend5-203;Bend5-205,Agbl4;Agbl4;Agbl4;Agbl4;Agbl4;Bend5;Bend5;Bend5;Bend5,0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,2,2,67621,ENSMUSG00000028545,conserved gene but different region,4,111414760,111415513,754,*,754,75,0.677718833,0.870348139,0.099469496,7.96E-57,CpGisland,TRUE,,
cg13061698,0.551473029,NA,NA,NA,NA,NA,Gm20537,Gm20537_Exon,9,88456268,88456317,88456316,88456317,50,+,TTGGTCTGGCGCCGCTTGGAATCTGGCTGGTTGTACCCATCAGCTTTGCG,Promoter (<=1kb),9,88407432,88456616,49185,2,Gm20537-202,299,Gm20537-202;Gm20537-201;Syncrip-201;Syncrip-210;Syncrip-211;Syncrip-207;Syncrip-208;Syncrip-203;Syncrip-205;Syncrip-209,Gm20537;Gm20537;Syncrip;Syncrip;Syncrip;Syncrip;Syncrip;Syncrip;Syncrip;Syncrip,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,5,NA,NA,mapped to different genes,9,88456277,88456476,200,*,200,15,0.625,0.818330606,0.075,6.51E-10,CpGisland,TRUE,TxEx1,
cg13068696,-4.04E-06,NA,NA,NA,NA,NA,Clpb,Clpb_Intron,7,101714033,101714082,101714033,101714034,50,-,CGATGATTATCTCTCACTGAGACATTTTTTACAGATGACGGTCGAGCTGT,"Intron (Clpb-205/Clpb, intron 4 of 5)",7,101663633,101722922,59290,1,Clpb-205,50400,Clpb-205;Clpb-201;Clpb-202;Clpb-211;Clpb-208;Clpb-207;Clpb-210,Clpb;Clpb;Clpb;Clpb;Clpb;Clpb;Clpb,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,21,20480,ENSMUSG00000001829,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA20,
cg13071028,0.510833284,NA,NA,NA,NA,NA,Sema3a,Sema3a_fiveUTR,5,13399855,13399904,13399903,13399904,50,-,TAAATCACCTGTTACCTCCAGTTTCCAGATTGTTTGAACTTCTCTGGCCG,5' UTR,5,13125593,13524707,399115,1,Sema3a-206,274262,Sema3a-206;Sema3a-202;Sema3a-203;Sema3a-204;Sema3a-201;Sema3a-205;Sema3a-209,Sema3a;Sema3a;Sema3a;Sema3a;Sema3a;Sema3a;Sema3a,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,9,20346,ENSMUSG00000028883,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg13078464,NA,0.261330227,NA,NA,NA,NA,Ihh,Ihh_Intergenic_upstream,1,74964856,74964905,74964856,74964857,50,+,CGGGTAGGCGGGGAGGTGGGCCACTGCTTTATTAAACACAGGGAAAACTA,Downstream (2-3kb),1,74945315,74951672,6358,2,Ihh-201,-13184,Nhej1-201,Nhej1,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_upstream,2,3,16147,ENSMUSG00000006538,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA14,
cg13094532,NA,NA,-0.000239452,NA,NA,NA,Lrmda,Lrmda_Intron,14,22192304,22192353,22192352,22192353,50,-,GCAGTAGGTCCATCTTGGTGGCATCTGATGTTGATTGGCTTTGTCCTGCG,"Intron (Lrmda-201/Lrmda, intron 2 of 6)",14,22019712,23056085,1036374,1,Lrmda-201,172592,Lrmda-201;Lrmda-204;Lrmda-203;Lrmda-206,Lrmda;Lrmda;Lrmda;Lrmda,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,157,157,76633,ENSMUSG00000063458,conserved gene and region,14,22192352,22192427,76,*,76,8,0.565789474,1.375565611,0.105263158,1.48E-06,CpGisland,TRUE,ReprPC7,
cg13132708,0.252372983,NA,NA,NA,NA,NA,Nptn,Nptn_Exon,9,58618630,58618679,58618678,58618679,50,+,CTGTCACTGCATTCCTGCTCCCCCTCCCTCTAGCTGGGTTTGTCAAGTCG,"Exon (Nptn-212/Nptn, exon 2 of 8)",9,58582240,58651318,69079,1,Nptn-212,36390,Nptn-212;Nptn-201;Nptn-213;Nptn-206;Nptn-203;Nptn-202;Nptn-211;Nptn-207;Nptn-204,Nptn;Nptn;Nptn;Nptn;Nptn;Nptn;Nptn;Nptn;Nptn,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,20,22,20320,ENSMUSG00000032336,conserved gene but different region,9,58618678,58618932,255,*,255,20,0.6,0.879917184,0.078431373,1.96E-13,CpGisland,TRUE,TxEnh7,
cg13153497,NA,NA,NA,NA,-0.232664319,NA,Faxc,Faxc_Exon,4,21931799,21931848,21931799,21931800,50,+,CGTATCTGCTCCACGAACTCCTGGTCATTAGGTGAGCCGGAGAGAGGGCC,Promoter (<=1kb),4,21931329,21994146,62818,1,Faxc-204,470,Faxc-204;Faxc-201;Faxc-202;Faxc-203,Faxc;Faxc;Faxc;Faxc,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,5,76132,ENSMUSG00000028246,conserved gene and region,4,21931002,21931985,984,*,984,98,0.706300813,0.798767457,0.099593496,4.26E-74,CpGisland,TRUE,PromF5,
cg13170453,-0.171093546,NA,NA,NA,NA,NA,Gdf6,Gdf6_Exon,4,9859336,9859385,9859336,9859337,50,+,CGATCTCTCGCACACTCCTCTCCGGAGACAGAAGTATTTGTTTGATGTGT,"Exon (Gdf6-201/Gdf6, exon 2 of 2)",4,9844372,9862345,17974,1,Gdf6-201,14964,Gdf6-201,Gdf6,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,11,242316,ENSMUSG00000051279,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg13202239,NA,NA,NA,NA,2.075718341,NA,Ntn1,Ntn1_Intron,11,68399735,68399784,68399783,68399784,50,+,ATTTTCTGTCTGTGAAAGCCTTTCTTCCCACCTCTGTTCAGATTAGCCCG,"Intron (Ntn1-202/Ntn1, intron 2 of 7)",11,68209364,68400823,191460,2,Ntn1-202,1039,Ntn1-202,Ntn1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,6,18208,ENSMUSG00000020902,conserved gene but different region,11,68399783,68400438,656,*,656,66,0.704268293,0.820995146,0.100609756,1.95E-50,CpGisland,TRUE,BivProm1,
cg13205819,NA,NA,NA,NA,0.270141236,0.237584872,Hoxc5,Hoxc5_Intron,15,103010033,103010082,103010081,103010082,50,+,TTAAATAAACTGAACTGGCTTTATGACCGGCTTCCCTAGAAGAACGGGCG,"Intron (Hoxc5-202/Hoxc5, intron 1 of 1)",15,102967443,103015676,48234,1,Hoxc5-202,42590,Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,46,134,15424,ENSMUSG00000022485,mapped to different genes,15,103009987,103010218,232,*,232,17,0.556034483,0.969041769,0.073275862,5.22E-11,CpGisland,TRUE,BivProm4,
cg13224508,NA,NA,0.113940488,0.000783285,NA,NA,Cnot6l,Cnot6l_threeUTR,5,96091605,96091654,96091653,96091654,50,+,GCACAACCATCTACATGCTTTCTCTCCTGCTCAGACATGATTTTGGCACG,3' UTR,5,96070333,96161990,91658,2,Cnot6l-210,70336,Cnot6l-210;Cnot6l-208;Cnot6l-201;Cnot6l-202;Cnot6l-203,Cnot6l;Cnot6l;Cnot6l;Cnot6l;Cnot6l,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,11,13,231464,ENSMUSG00000034724,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg13235828,-0.076745329,NA,NA,NA,NA,NA,Fgfr2,Fgfr2_Exon,7,130198423,130198472,130198471,130198472,50,-,CAGAACTGTCAACCATGCAGAGTGAAAGGATATCCCAATAGAATTACCCG,"Exon (Fgfr2-207/Fgfr2, exon 6 of 16)",7,130162451,130266263,103813,2,Fgfr2-211,67791,Fgfr2-211;Fgfr2-217;Fgfr2-207;Fgfr2-226;Fgfr2-215;Fgfr2-201;Fgfr2-202;Fgfr2-203;Fgfr2-204;Fgfr2-205;Fgfr2-206;Fgfr2-208;Fgfr2-209;Fgfr2-210;Fgfr2-212;Fgfr2-213;Fgfr2-214;Fgfr2-216;Fgfr2-222;Fgfr2-225;Fgfr2-218,Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,79,14183,ENSMUSG00000030849,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx8,
cg13258110,NA,0.110188317,NA,0.455016116,NA,NA,Sp2,Sp2_Intergenic_upstream,11,96997463,96997512,96997511,96997512,50,-,TGTGGTGTCTGGGGCCCGGGGCCTCTCATTTGTGGGGACGTGCTGTGGCG,Distal Intergenic,11,96954219,96982959,28741,2,Sp2-201,-14553,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,1,1,78912,ENSMUSG00000018678,mapped to different genes,11,96997479,96997682,204,*,204,19,0.705882353,0.791828396,0.093137255,3.36E-14,CpGisland,TRUE,BivProm2,
cg13275896,NA,NA,NA,0.411442773,NA,NA,Cpeb2,Cpeb2_Intergenic_downstream,5,43339231,43339280,43339231,43339232,50,-,CGACAATGCAGTGCTTTCTGCACCATCTGCTGGCTCTGCAAAGGTAATTA,Distal Intergenic,5,43237315,43246459,9145,1,Cpeb2-203,101965,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,11,231207,ENSMUSG00000039782,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA6,
cg13326443,-0.000482475,NA,NA,NA,NA,NA,Kcna1,Kcna1_Exon,6,126642173,126642222,126642173,126642174,50,-,CGATGGCACACAAGGAGCCCACGATCTTGCCTCCAATTGTCACAGGGTAC,"Exon (Kcna1-201/Kcna1, exon 2 of 2)",6,126640397,126644796,4400,2,Kcna1-201,2574,Kcna1-201;Kcna1-202;Kcna1-203,Kcna1;Kcna1;Kcna1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,9,12,16485,ENSMUSG00000047976,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg13342658,NA,NA,NA,NA,-0.230620573,NA,Nkx2-2,Nkx2-2_Exon,2,147188286,147188335,147188286,147188287,50,-,CGATTGCTAAGCTGCGGACAATGAGCGAAATGTAGACAAATGTCCCGCTC,"Exon (6430503K07Rik-201/6430503K07Rik-201, exon 3 of 3)",2,147186305,147194243,7939,2,Nkx2-2-202,5908,Nkx2-2-203;Nkx2-2-201;Nkx2-2-202;Nkx2-2-204,Nkx2-2;Nkx2-2;Nkx2-2;Nkx2-2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,30,18088,ENSMUSG00000027434,conserved gene but different region,2,147188041,147188404,364,*,364,26,0.585164835,0.836633663,0.071428571,2.81E-16,CpGisland,TRUE,BivProm2,
cg13373685,NA,NA,NA,NA,-0.260487776,NA,Hoxc5,Hoxc5_Exon,15,103014185,103014234,103014233,103014234,50,-,CATCCAGGTACTGCTACGGCGGATTGGACTTAAGCATCACTTTCCCACCG,"Exon (Hoxc5-201/Hoxc5, exon 1 of 2)",15,102967443,103015676,48234,1,Hoxc5-202,46742,Hoxc4-202;Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc4;Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,mapped to different genes,15,103014167,103014734,568,*,568,41,0.588028169,0.835773758,0.072183099,1.73E-25,CpGisland,TRUE,BivProm1,
cg13421440,NA,NA,NA,NA,-0.163607584,-0.533200007,Rtca,Rtca_fiveUTR,3,116506946,116506995,116506946,116506947,50,+,CGAATCATTTCCAGTCCAGATAAATGTTGAGGCCTTCAGGTCATAATACT,5' UTR,3,116488963,116508208,19246,2,Rtca-201,1213,Rtca-201;Rtca-203;Rtca-205;Rtca-204,Rtca;Rtca;Rtca;Rtca,0;0;0;0,TRUE,FALSE,FALSE,TRUE,TRUE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,1,66368,ENSMUSG00000000339,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx1,
cg13428642,NA,NA,NA,NA,-0.132646696,NA,Hoxb9,Hoxb9_Promoter,11,96271187,96271236,96271235,96271236,50,-,GATAGCACATTGCATCAGCATAAAACAATCCATCCTCGATATGGAGTGCG,Promoter (<=1kb),11,96271457,96276595,5139,1,Hoxb9-201,-270,Hoxb9-201;Hoxb9-202,Hoxb9;Hoxb9,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,7,22,15417,ENSMUSG00000020875,mapped to different genes,11,96271235,96271356,122,*,122,12,0.573770492,1.195102041,0.098360656,2.23E-09,CpGisland,TRUE,BivProm1,
cg13459195,NA,0.020441708,NA,NA,0.288087974,NA,Celf4,Celf4_Exon,18,25486855,25486904,25486855,25486856,50,-,CGTCTTTGGGCCGCTTCAGCTGCACCTTGAGCCTCTTCATGCCGATCTGG,Promoter (<=1kb),18,25479488,25486897,7410,2,Celf4-208,0,Celf4-202;Celf4-201;Celf4-203;Celf4-207;Celf4-206;Celf4-208;Celf4-204;Celf4-210,Celf4;Celf4;Celf4;Celf4;Celf4;Celf4;Celf4;Celf4,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,31,59,108013,ENSMUSG00000024268,conserved gene but different region,18,25486659,25486867,209,*,209,18,0.679425837,0.746873139,0.086124402,7.38E-13,CpGisland,TRUE,,
cg13466539,NA,0.038353083,NA,NA,NA,NA,Ehbp1,Ehbp1_Exon,11,22285515,22285564,22285563,22285564,50,+,TCCTGGTAGGAGGCCACAAACTGGAACTTGGATGCATGTTTTCCCACACG,Promoter (<=1kb),11,22005828,22285838,280011,2,Ehbp1-201,274,Ehbp1-201;Ehbp1-202;Ehbp1-207;Ehbp1-203;Ehbp1-205,Ehbp1;Ehbp1;Ehbp1;Ehbp1;Ehbp1,0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,45,216565,ENSMUSG00000042302,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg13467605,-0.48021912,NA,NA,NA,NA,NA,Arid5b,Arid5b_Exon,10,68277993,68278042,68278041,68278042,50,+,GGATAAAAGTTGCCGGCTGGTCCTCTCTTCCCACAACAGCTGGAGCTCCG,Promoter (<=1kb),10,68092520,68278740,186221,2,Arid5b-204,698,Arid5b-204;Arid5b-201;Arid5b-202,Arid5b;Arid5b;Arid5b,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,33,71371,ENSMUSG00000019947,conserved gene and region,,,,,,,,,,,,,TRUE,PromF4,
cg13529847,-0.115496409,NA,NA,NA,NA,NA,Gpatch2l,Gpatch2l_Intergenic_upstream,12,86216861,86216910,86216909,86216910,50,-,CCACACAATTCTCTCAATTAACGATAGGCAGAAATTAATTTTTCCCCTCG,Distal Intergenic,12,86241858,86291784,49927,1,Gpatch2l-204,-24997,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,13,17,70373,ENSMUSG00000021254,conserved gene but different region,12,86216882,86217003,122,*,122,9,0.532786885,1.082840237,0.073770492,4.80E-06,CpGisland,TRUE,ReprPC1,
cg13544332,NA,NA,NA,-0.766558227,NA,NA,Bcl9l,Bcl9l_Intron,9,44498891,44498940,44498891,44498892,50,+,CGTTACTGGTCTCCAGAAGAGCCCAGCTGCAGCCCCGGGGCCCCGCCAGG,"Intron (Bcl9l-206/Bcl9l, intron 1 of 7)",9,44482825,44510422,27598,1,Bcl9l-206,16066,Bcl9l-206;Bcl9l-202;Bcl9l-203;Bcl9l-205;Bcl9l-201;Bcl9l-204,Bcl9l;Bcl9l;Bcl9l;Bcl9l;Bcl9l;Bcl9l,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,9,80288,ENSMUSG00000063382,conserved gene but different region,9,44498867,44499178,312,*,312,28,0.743589744,0.65511811,0.08974359,2.98E-20,CpGisland,TRUE,TSS2,
cg13585349,0.222862544,NA,NA,NA,NA,NA,Gm37013,Gm37013_Intron,18,37178583,37178632,37178631,37178632,50,+,GAGTGGGCGGTAGGCAGGCTCCAGAGTGCTGTCTGGCAAGATAGTCCCCG,"Intron (Pcdha1-202/Pcdha1, intron 3 of 4)",18,36969916,37833296,863381,1,Gm37013-201,208667,Gm37013-201;Gm37388-201;Gm42416-201;Pcdha1-202;Pcdha1-201;Pcdha11-201;Pcdha11-202;Pcdha11-203;Pcdha11-204;Pcdha12-201;Pcdha2-201;Pcdha2-202;Pcdha3-201;Pcdha4-202;Pcdha4-201;Pcdha5-201;Pcdha6-202;Pcdha6-201;Pcdha6-203;Pcdha7-201;Pcdha8-201;Pcdha9-201;Pcdhac1-201;Pcdhac2-201,Gm37013;Gm37388;Gm42416;Pcdha1;Pcdha1;Pcdha11;Pcdha11;Pcdha11;Pcdha11;Pcdha12;Pcdha2;Pcdha2;Pcdha3;Pcdha4;Pcdha4;Pcdha5;Pcdha6;Pcdha6;Pcdha6;Pcdha7;Pcdha8;Pcdha9;Pcdhac1;Pcdhac2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,14,100384868,ENSMUSG00000103458,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg13636207,-0.342153472,NA,NA,NA,NA,NA,Gata2,Gata2_Intron,6,88197422,88197471,88197470,88197471,50,+,GATTATTAAAAAGTTCATTTCCTGGCGAATCGGGTGACGTCAGGGGCTCG,"Intron (Gata2-202/Gata2, intron 1 of 5)",6,88193891,88207032,13142,1,Gata2-202,3531,Gata2-202;Gata2-203;Gata2-201;Gata2-205,Gata2;Gata2;Gata2;Gata2,0;-863;0;-3448,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,12,14461,ENSMUSG00000015053,conserved gene and region,6,88197447,88197596,150,*,150,17,0.726666667,0.862068966,0.113333333,2.99E-14,CpGisland,TRUE,BivProm1,Low_complexity
cg13649253,NA,NA,NA,NA,0.961819783,NA,Nfix,Nfix_Exon,8,84716244,84716293,84716292,84716293,50,-,TAGCAAAAATGACCCCGGGACTTTGCCCTGGCCGCTACCGTTGGGCTGCG,"Exon (Nfix-204/Nfix, exon 9 of 11)",8,84704712,84773396,68685,2,Nfix-204,57103,Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-206;Nfix-205,Nfix;Nfix;Nfix;Nfix;Nfix;Nfix,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,20,49,18032,ENSMUSG00000001911,conserved gene but different region,8,84716235,84716387,153,*,153,15,0.62745098,1,0.098039216,1.26E-11,CpGisland,TRUE,TxEnh5,
cg13656158,0.088504585,NA,NA,NA,NA,NA,Wfs1,Wfs1_Exon,5,36967003,36967052,36967051,36967052,50,-,AGGCAGCTGATGGCCTTGAGCTCGAAGACAGGCCACTTGCTGCCCAGGCG,"Exon (Wfs1-201/Wfs1, exon 8 of 8)",5,36966104,36989205,23102,2,Wfs1-201,22153,Wfs1-201;Wfs1-202;Wfs1-203,Wfs1;Wfs1;Wfs1,0;0;9904,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,22393,ENSMUSG00000039474,conserved gene and region,5,36966860,36967182,323,*,323,23,0.609907121,0.769047619,0.07120743,1.95E-14,CpGisland,TRUE,TxEx3,
cg13656236,NA,0.041841548,NA,NA,NA,0.026047926,Nkx2-2,Nkx2-2_Exon,2,147188384,147188433,147188384,147188385,50,-,CGAAATAATACATGATTGACGCTCTCTTTCAATGTGTCCTAACTGTTTGG,"Exon (6430503K07Rik-201/6430503K07Rik-201, exon 3 of 3)",2,147186305,147194243,7939,2,Nkx2-2-202,5810,Nkx2-2-203;Nkx2-2-201;Nkx2-2-202;Nkx2-2-204,Nkx2-2;Nkx2-2;Nkx2-2;Nkx2-2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,30,18088,ENSMUSG00000027434,conserved gene but different region,2,147188041,147188404,364,*,364,26,0.585164835,0.836633663,0.071428571,2.81E-16,CpGisland,TRUE,BivProm2,
cg13681420,NA,NA,-0.013465504,NA,NA,NA,Ddx5,Ddx5_threeUTR,11,106783271,106783320,106783319,106783320,50,+,CCAAGAAGCCAGGATTCACTTGAGAATGTGTCTCTCTCTGGCAGGTCTCG,3' UTR,11,106780355,106788532,8178,2,Ddx5-201,5212,Ddx5-201;Ddx5-208;Ddx5-205;Ddx5-207;Ddx5-203;Ddx5-202;Ddx5-209;Ddx5-206;Ddx5-204;Polg2-201;Polg2-203;Polg2-206;Polg2-204;Polg2-202,Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Ddx5;Polg2;Polg2;Polg2;Polg2;Polg2,0;0;0;0;0;0;2730;0;0;-3756;-3734;-3798;-3798;-3769,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,6,13207,ENSMUSG00000020719,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh4,
cg13692433,NA,NA,NA,NA,-1.231797586,NA,Ncam1,Ncam1_fiveUTR,9,49798904,49798953,49798904,49798905,50,-,CGCTGATCGGAGAATGAGTGACAGTCCCAGCCTCAGCACACTCGCAACTC,Promoter (<=1kb),9,49502136,49798925,296790,2,Ncam1-204,0,Ncam1-204;Ncam1-202;Ncam1-201;Ncam1-203;Ncam1-207,Ncam1;Ncam1;Ncam1;Ncam1;Ncam1,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,16,17967,ENSMUSG00000039542,conserved gene and region,9,49798889,49799056,168,*,168,16,0.660714286,0.881311475,0.095238095,3.56E-12,CpGisland,TRUE,BivProm1,
cg13694139,NA,NA,-0.271098669,NA,NA,NA,Clpb,Clpb_Intron,7,101714027,101714076,101714075,101714076,50,-,AGTTTCCGATGATTATCTCTCACTGAGACATTTTTTACAGATGACGGTCG,"Intron (Clpb-205/Clpb, intron 4 of 5)",7,101663633,101722922,59290,1,Clpb-205,50394,Clpb-205;Clpb-201;Clpb-202;Clpb-211;Clpb-208;Clpb-207;Clpb-210,Clpb;Clpb;Clpb;Clpb;Clpb;Clpb;Clpb,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,21,20480,ENSMUSG00000001829,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA20,
cg13702222,NA,NA,-0.288423661,NA,NA,NA,Mbnl1,Mbnl1_fiveUTR,3,60528754,60528803,60528802,60528803,50,-,AGGTTGGTACTAAGAAGTGCCTTTCCTGACGTCTCTGCTGCTTGGAACCG,5' UTR,3,60472830,60595764,122935,1,Mbnl1-222,55924,Mbnl1-222;Mbnl1-221;Mbnl1-216;Mbnl1-220;Mbnl1-211;Mbnl1-204;Mbnl1-201;Mbnl1-209;Mbnl1-202;Mbnl1-225;Mbnl1-217;Mbnl1-203;Mbnl1-218;Mbnl1-208;Mbnl1-219;Mbnl1-214;Mbnl1-207;Mbnl1-205;Mbnl1-212,Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,36,56758,ENSMUSG00000027763,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg13721678,0.065027645,0.034999713,NA,NA,0.590269639,0.144993517,Cadps2,Cadps2_Exon,6,23410880,23410929,23410880,23410881,50,+,CGGGCACAGTACTCATCTAACACAAAGACTTGGCCAGGGCTAAACCATCC,"Exon (Cadps2-213/Cadps2, exon 14 of 30)",6,23262773,23839137,576365,2,Cadps2-213,428208,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-207;Cadps2-202;Cadps2-204,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg13725272,-0.618901118,NA,NA,NA,NA,NA,Magi1,Magi1_fiveUTR,6,94283822,94283871,94283822,94283823,50,-,CGGCCCCTTTAAGCAGATACAAAGGCTCGGCTTGTTTTGTTACAGTTCAT,Promoter (<=1kb),6,93675455,94283917,608463,2,Magi1-208,46,Magi1-201;Magi1-202;Magi1-208;Magi1-205;Magi1-204,Magi1;Magi1;Magi1;Magi1;Magi1,0;0;0;0;-797,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,8,18,14924,ENSMUSG00000045095,conserved gene but different region,6,94283398,94284030,633,*,633,85,0.710900474,1.066945607,0.134281201,8.37E-77,CpGisland,TRUE,TSS1,
cg13739934,0.237355338,NA,NA,NA,1.893363393,NA,Pou4f1,Pou4f1_Exon,14,104466836,104466885,104466836,104466837,50,+,CGTCTCGTCCAGGCTGGCGAAGAGGTTGCTCTGCAGCTGCAGGCGACACA,"Exon (Pou4f1-201/Pou4f1, exon 2 of 3)",14,104461676,104467999,6324,2,Pou4f1-201,1114,Pou4f1-201;Pou4f1-202,Pou4f1;Pou4f1,0;-1471,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,31,18996,ENSMUSG00000048349,mapped to different genes,14,104465680,104466880,1201,*,1201,169,0.729392173,1.061175942,0.14071607,3.29E-156,CpGisland,TRUE,BivProm1,
cg13752936,NA,-0.005972336,NA,NA,NA,NA,Tenm2,Tenm2_Intron,11,36152750,36152799,36152750,36152751,50,-,CGGGGTGAATTTAATTGCTTTAGTTAAGTGGAAATCGGGTTAAAAATGAT,"Intron (Tenm2-202/Tenm2, intron 11 of 30)",11,36006656,37235882,1229227,2,Tenm2-202,1083083,Tenm2-202;Tenm2-208;Tenm2-201;Tenm2-204;Tenm2-205,Tenm2;Tenm2;Tenm2;Tenm2;Tenm2,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,47,84,23964,ENSMUSG00000049336,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA11,
cg13754878,NA,NA,NA,NA,0.714044928,-0.09047456,Thtpa,Thtpa_threeUTR,14,55097717,55097766,55097717,55097718,50,-,CGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTTTATAGGATTTCCACTT,3' UTR,14,55094784,55098986,4203,1,Thtpa-201,2933,Ap1g2-209;Ap1g2-207;Ap1g2-203;Ap1g2-202;Ap1g2-201;Ap1g2-211;Ap1g2-204;Ap1g2-206;Ap1g2-210;Thtpa-201,Ap1g2;Ap1g2;Ap1g2;Ap1g2;Ap1g2;Ap1g2;Ap1g2;Ap1g2;Ap1g2;Thtpa,0;1622;0;0;0;0;0;6744;7125;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,4,4,105663,ENSMUSG00000045691,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg13757685,NA,0.017219438,NA,NA,NA,NA,Cyp7b1,Cyp7b1_Intron,3,18190072,18190121,18190120,18190121,50,+,CAACAGATGAACAAAGCCCACATTCAAATCTGTAGCTCATTAAAATAACG,"Intron (Cyp7b1-201/Cyp7b1, intron 1 of 5)",3,18071950,18243338,171389,2,Cyp7b1-201,53217,Cyp7b1-201,Cyp7b1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,15,17,13123,ENSMUSG00000039519,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg13761591,0.337504314,NA,NA,NA,NA,NA,Tln2,Tln2_Exon,9,67224051,67224100,67224099,67224100,50,-,GGCTGCACGGACAAGATTGTCTGAGGCTCTTTTCACAGCATTTCCTGCCG,"Exon (Tln2-202/Tln2, exon 57 of 58)",9,67217087,67559703,342617,2,Tln2-202,335603,Tln2-202;Tln2-209;Tln2-204;Tln2-207;Tln2-205;Tln2-201;Tln2-208,Tln2;Tln2;Tln2;Tln2;Tln2;Tln2;Tln2,0;0;0;0;0;0;7307,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,70549,ENSMUSG00000052698,conserved gene and region,,,,,,,,,,,,,TRUE,Tx5,
cg13804575,NA,NA,-0.048487427,NA,NA,NA,Zfp462,Zfp462_Intron,4,54949685,54949734,54949685,54949686,50,+,CGTCTGGGATGGGGAAAGACCAACCAGTTGGGGCTTTCTCCCAGGGCTCC,"Intron (Zfp462-204/Zfp462, intron 1 of 2)",4,54945048,55008314,63267,1,Zfp462-204,4637,Zfp462-204;Zfp462-203,Zfp462;Zfp462,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,9,23,242466,ENSMUSG00000060206,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg13824077,0.132574783,NA,NA,NA,NA,NA,Nr4a2,Nr4a2_Intron,2,57109287,57109336,57109335,57109336,50,+,CACTTAATGAGGTTCTCTAAAATATATAACCCGTGAAATTGCTAACCCCG,"Intron (Nr4a2-201/Nr4a2, intron 5 of 7)",2,57106830,57115038,8209,2,Nr4a2-201,5702,Nr4a2-201;Nr4a2-203;Nr4a2-206;Nr4a2-202;Nr4a2-205;Nr4a2-204,Nr4a2;Nr4a2;Nr4a2;Nr4a2;Nr4a2;Nr4a2,0;0;0;0;0;5037,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,25,18227,ENSMUSG00000026826,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC2,
cg13834844,NA,NA,NA,NA,-0.551116127,NA,Pax2,Pax2_Intergenic_upstream,19,44671125,44671174,44671173,44671174,50,+,AAACTTCTATTAGTAATGGAGACCTCGCCGGAGACCTTCCGCGGAGAGCG,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-84871,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,19,44671150,44671210,61,*,61,7,0.62295082,1.196078431,0.114754098,5.22E-06,CpGisland,TRUE,BivProm2,
cg13848598,NA,NA,NA,NA,0.146794266,NA,Adrb1,Adrb1_Exon,19,56723058,56723107,56723058,56723059,50,-,CGTAGTCTCCTTCTACGTGCCCCTGTGCATCATGGCCTTCGTGTACCTGC,Promoter (<=1kb),19,56722199,56725150,2952,1,Adrb1-201,859,Adrb1-201;Adrb1-202,Adrb1;Adrb1,0;-756,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,11554,ENSMUSG00000035283,conserved gene and region,19,56721990,56723878,1889,*,1889,218,0.710428798,0.916980082,0.115404976,2.37E-179,CpGisland,TRUE,BivProm1,
cg13856487,-0.035746746,NA,NA,NA,NA,NA,Ptf1a,Ptf1a_Intergenic_downstream,2,19451631,19451680,19451679,19451680,50,+,TATGTTTTGTGTCTCCATATTTTGATCCGTACGATTAAGCAGATGTTACG,Distal Intergenic,2,19445663,19447501,1839,1,Ptf1a-201,5968,Ptf1a-201,Ptf1a,5968,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,14,21,19213,ENSMUSG00000026735,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg13940770,NA,NA,NA,NA,0.075217932,NA,Ppp2r2b,Ppp2r2b_fiveUTR,18,42898766,42898815,42898766,42898767,50,+,CGCGCAGGAAACTGTTGTTGATTTTGCGGGTATCAATGTCCTCCTCCATT,Promoter (<=1kb),18,42758468,42898815,140348,2,Ppp2r2b-206,0,Ppp2r2b-204;Ppp2r2b-202;Ppp2r2b-201;Ppp2r2b-203;Ppp2r2b-208;Ppp2r2b-207;Ppp2r2b-205;Ppp2r2b-206,Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,9,15,72930,ENSMUSG00000024500,conserved gene and region,18,42898666,42898793,128,*,128,11,0.6015625,0.951351351,0.0859375,5.43E-08,CpGisland,TRUE,BivProm1,
cg13943140,NA,NA,NA,NA,0.930075737,0.374667658,Gm2691,Gm2691_Intergenic_downstream,6,10760258,10760307,10760258,10760259,50,-,CGTTTCTGCTTGATAGCCTGTAACATTTCCATGTAGTGCACTTTGCATGG,Distal Intergenic,6,10774114,10775014,901,2,Gm2691-201,14756,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,1,100040285,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg13965097,NA,-0.065113368,NA,NA,NA,NA,Fam180a,Fam180a_Promoter,6,35326271,35326320,35326319,35326320,50,-,GAATTTTTCTTTAACAAACAGACCCGCGGAACTTGTTAGAGAGCCCGGCG,Promoter (<=1kb),6,35312668,35326141,13474,2,Fam180a-201,-179,Fam180a-201,Fam180a,-130,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,1,1,208164,ENSMUSG00000047420,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA4,
cg13992970,NA,NA,-0.133097718,NA,NA,NA,Dennd1b,Dennd1b_Intron,1,139011331,139011380,139011331,139011332,50,-,CGAAGAAAAGAAATTGCTTTCTTTGTCAAGGTGTTTTCAATTCAATTCTC,"Intron (Dennd1b-209/Dennd1b, intron 2 of 9)",1,138963435,139063718,100284,1,Dennd1b-209,47896,Dennd1b-209;Dennd1b-202;Dennd1b-205;Dennd1b-208;Dennd1b-201,Dennd1b;Dennd1b;Dennd1b;Dennd1b;Dennd1b,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,5,329260,ENSMUSG00000056268,conserved gene and region,,,,,,,,,,,,,TRUE,znf1,
cg13993270,NA,-0.216645475,NA,NA,NA,NA,Gm17304,Gm17304_Exon,5,106574976,106575025,106575024,106575025,50,-,TATCCTTTTGATGGCTATAATTTATTCCAAATCGTCCCTGGACTGAAACG,"Exon (Gm29464-201/Gm29464-201, exon 1 of 1)",5,106609098,106609201,104,1,Gm17304-201,-34122,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,35,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg14153842,NA,-0.105228845,NA,NA,NA,NA,Faah,Faah_Intron,4,115979551,115979600,115979551,115979552,50,-,CGTTTTTAGAGCCGGTAATTGACTCCTTTCAGTTGATAATTCATGGCTTG,"Intron (Faah-202/Faah, intron 13 of 14)",4,115967145,116017675,50531,2,Faah-202,38075,Faah-202,Faah,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,20,20,14073,ENSMUSG00000034171,mapped to different genes,4,115979435,115979564,130,*,130,14,0.707692308,0.870396939,0.107692308,1.85E-11,CpGisland,TRUE,BivProm1,
cg14159149,NA,NA,NA,-0.77045079,NA,NA,Foxo6,Foxo6_Intron,4,120282926,120282975,120282974,120282975,50,-,GCCAGCAACTGTGCCAGGAGCGGCTGGCACGGGCTCGTGCCCAGGAGGCG,"Intron (Foxo6-201/Foxo6, intron 1 of 1)",4,120267079,120287349,20271,2,Foxo6-201,4374,Foxo6-201,Foxo6,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,14,42,329934,ENSMUSG00000052135,conserved gene and region,4,120282454,120283157,704,*,704,60,0.700284091,0.697259822,0.085227273,2.40E-41,CpGisland,TRUE,BivProm1,
cg14188130,NA,NA,NA,NA,0.587301469,NA,Sp4,Sp4_Exon,12,118261724,118261773,118261772,118261773,50,-,TACCTTCCTTCTCCTTCCCTACAATTAGGACAGGAACAGGCAACTCTTCG,"Exon (Sp4-201/Sp4, exon 4 of 6)",12,118234933,118301370,66438,2,Sp4-201,39597,Sp4-201;Sp4-203;Sp4-202,Sp4;Sp4;Sp4,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,14,20688,ENSMUSG00000025323,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg14237002,-0.77513593,NA,NA,NA,NA,NA,Cpsf6,Cpsf6_Exon,10,117361803,117361852,117361851,117361852,50,-,ATGCTGTGCCCCATATGCCATGGAATCCTAGTTTCCAGGAACAAAGGCCG,"Exon (Cpsf6-206/Cpsf6, exon 6 of 11)",10,117344673,117376970,32298,2,Cpsf6-201,15118,Cpsf6-201;Cpsf6-207;Cpsf6-206;Cpsf6-204;Cpsf6-208;Cpsf6-205;Cpsf6-203,Cpsf6;Cpsf6;Cpsf6;Cpsf6;Cpsf6;Cpsf6;Cpsf6,0;0;0;-859;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,432508,ENSMUSG00000055531,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx7,
cg14238859,-0.275514963,NA,NA,NA,NA,NA,Adsl,Adsl_threeUTR,15,80967121,80967170,80967121,80967122,50,+,CGGCGCATTCGGCAAGAGCTGCCTTTCATGGCCACAGAGAACATCATCAT,3' UTR,15,80948490,80970946,22457,1,Adsl-201,18631,Adsl-201;Adsl-204;Adsl-205;Adsl-212;Adsl-211;Adsl-206;Adsl-207;Adsl-202;Adsl-210,Adsl;Adsl;Adsl;Adsl;Adsl;Adsl;Adsl;Adsl;Adsl,0;0;0;18604;18602;0;18584;5908;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,2,11564,ENSMUSG00000022407,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg14261840,NA,NA,NA,NA,-0.290849404,NA,Fezf2,Fezf2_Intron,14,12347039,12347088,12347039,12347040,50,+,CGTATCACAACAAACTGCTCAAAGACGCTCCAGCACTTTCAACAGGCCGG,"Intron (Fezf2-202/Fezf2, intron 1 of 5)",14,12343388,12348189,4802,2,Fezf2-202,1101,Fezf2-203;Fezf2-201;Fezf2-202,Fezf2;Fezf2;Fezf2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,45,54713,ENSMUSG00000021743,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg14314614,-0.089119387,NA,NA,NA,NA,NA,Zmym4,Zmym4_fiveUTR,4,126968095,126968144,126968095,126968096,50,-,CGGGGGGTTAATGGCCTCCAAGGGGCCCCGTGAGTAGGATTATTTTCTCT,Promoter (<=1kb),4,126861939,126968135,106197,2,Zmym4-201,0,Zmym4-201;Zmym4-209;Zmym4-202,Zmym4;Zmym4;Zmym4,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,8,67785,ENSMUSG00000042446,conserved gene and region,4,126967482,126968160,679,*,679,84,0.773195876,0.847917224,0.12371134,2.00E-72,CpGisland,TRUE,,
cg14405266,-0.190069245,NA,NA,NA,NA,NA,Zfp771,Zfp771_fiveUTR,7,127244949,127244998,127244949,127244950,50,+,CGGGTCCTGAGCTTCTGATCCAGCTCCCCGCCTCAGGACACCAAGATGCC,Promoter (<=1kb),7,127244274,127254803,10530,1,Zfp771-201,675,Zfp771-201;Zfp771-202;Zfp771-203,Zfp771;Zfp771;Zfp771,0;-103;-189,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,1,244216,ENSMUSG00000054716,conserved gene but different region,7,127244470,127245003,534,*,534,43,0.715355805,0.63640143,0.080524345,9.79E-29,CpGisland,TRUE,TSS2,
cg14427818,NA,NA,0.145578988,NA,NA,NA,Dpyd,Dpyd_Intergenic_upstream,3,118364329,118364378,118364377,118364378,50,-,AGTAAATCCAATAATATTTCTGACAGAATTGATTACAATAATGTCAAACG,Distal Intergenic,3,118562129,119432924,870796,1,Dpyd-201,-197800,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,5,29,99586,ENSMUSG00000033308,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk1,
cg14431257,0.246504213,NA,NA,NA,NA,NA,Nfib,Nfib_threeUTR,4,82290628,82290677,82290676,82290677,50,-,AAAATGGATCAACCCTGGTGTGTAGCTAGCAAGCAATAACTGACTACTCG,3' UTR,4,82290173,82505308,215136,2,Nfib-201,214631,Nfib-201;Nfib-203;Nfib-202,Nfib;Nfib;Nfib,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,11,66,18028,ENSMUSG00000008575,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg14453487,NA,NA,NA,NA,-0.519031942,-0.599745209,Ahdc1,Ahdc1_Intron,4,133042970,133043019,133042970,133042971,50,-,CGGTGTGGGCTGGAGCAGCTGCAGTGGTTCGAGTGTCACACTATCTCTCC,"Intron (Ahdc1-210/Ahdc1, intron 2 of 3)",4,133011260,133060820,49561,1,Ahdc1-210,31710,Ahdc1-210;Ahdc1-203;Ahdc1-204;Ahdc1-205;Ahdc1-207;Ahdc1-211;Ahdc1-209;Ahdc1-206;Ahdc1-201;Ahdc1-202,Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1;Ahdc1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,49,230793,ENSMUSG00000037692,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA1,
cg14462513,NA,NA,NA,NA,-0.496663405,NA,Hoxc5,Hoxc5_Intron,15,103014571,103014620,103014571,103014572,50,+,CGCCTGGGTTTTATAGGCCATGCGGGGCAAATAAAGAAAAAAAACCTGCG,"Intron (Hoxc5-202/Hoxc5, intron 1 of 1)",15,102967443,103015676,48234,1,Hoxc5-202,47128,Hoxc4-202;Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc4;Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,46,134,15424,ENSMUSG00000022485,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg14467787,NA,NA,NA,NA,-0.318232505,NA,Evx2,Evx2_Promoter,2,74659620,74659669,74659668,74659669,50,+,TGTCATTCATCAAAAAGTAGCGCCCGCTCGTCATTAAGGTACGAATGACG,Promoter (<=1kb),2,74652991,74659557,6567,2,Evx2-201,-63,Evx2-201;Evx2-202,Evx2;Evx2,0;-201,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,35,14029,ENSMUSG00000001815,conserved gene and region,2,74659459,74659676,218,*,218,14,0.5,1.031778229,0.064220183,2.09E-08,CpGisland,TRUE,ReprPC1,
cg14472440,-0.229204101,NA,NA,NA,NA,NA,Rps24,Rps24_Intron,14,24779251,24779300,24779299,24779300,50,-,GCCTTGGCAGCAGAAGGTGACATCTGGTGACTAATGGCCGCGGCTGCGCG,"Intron (4930428N03Rik-205/4930428N03Rik-205, intron 3 of 5)",14,24491149,24491989,841,1,Rps24-209,288151,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,12,20088,ENSMUSG00000025290,mapped to different genes,14,24779188,24779323,136,*,136,14,0.720588235,0.801346801,0.102941176,3.56E-11,CpGisland,TRUE,TSS1,
cg14497036,NA,0.14111387,NA,NA,NA,NA,Antxr2,Antxr2_Intron,5,97935169,97935218,97935169,97935170,50,-,CGATCTGTACCTGCTGTCCCCTGTCACTCCCTGGAAACTTGGCGGCAGAT,"Intron (Antxr2-201/Antxr2, intron 16 of 16)",5,97882783,98030962,148180,2,Antxr2-201,95744,Antxr2-201;Antxr2-202,Antxr2;Antxr2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,71914,ENSMUSG00000029338,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA19,
cg14509153,NA,NA,NA,-0.213939466,NA,NA,Nr5a1,Nr5a1_Promoter,2,38718830,38718879,38718878,38718879,50,+,TCAGATCCGATGCCAATGTCAGAGAAGTCCATAGTGCTGGGTCAAGGCCG,Promoter (4-5kb),2,38692660,38714542,21883,2,Nr5a1-201,-4288,Nr5a1-201;Nr6a1-202;Nr6a1-210;Nr6a1-201,Nr5a1;Nr6a1;Nr6a1;Nr6a1,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,7,26423,ENSMUSG00000026751,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm3,
cg14540643,NA,NA,NA,NA,-0.884640915,NA,Gnao1,Gnao1_Exon,8,93811368,93811417,93811368,93811369,50,-,CGCCCTCGAGCGGAGCAAGGCGATTGAGAAAAACCTCAAAGAGGATGGCA,"Exon (Gnao1-202/Gnao1, exon 1 of 2)",8,93809966,93950403,140438,1,Gnao1-206,1402,Gnao1-206;Gnao1-202;Gnao1-201;Gnao1-203;Gnao1-207,Gnao1;Gnao1;Gnao1;Gnao1;Gnao1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,13,14681,ENSMUSG00000031748,conserved gene and region,8,93811274,93811435,162,*,162,16,0.648148148,0.965722802,0.098765432,1.97E-12,CpGisland,TRUE,BivProm1,
cg14580567,-0.559891596,NA,NA,NA,NA,NA,Hhip,Hhip_fiveUTR,8,80057996,80058045,80058044,80058045,50,+,CACAGCCTCTCATGTTTCGTTCCCTCTTTTCTTCTTCTTTTTAACTAGCG,Promoter (<=1kb),8,79965853,80058006,92154,2,Hhip-201,0,Hhip-201,Hhip,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,2,15245,ENSMUSG00000064325,mapped to different genes,8,80057847,80058292,446,*,446,44,0.715246637,0.796816631,0.098654709,2.03E-33,CpGisland,TRUE,PromF5,
cg14593595,0.289293447,NA,NA,NA,NA,NA,Maf,Maf_Intergenic_downstream,8,115632815,115632864,115632863,115632864,50,-,TTAGTGGCCACAGCACGATTCTGAAAATATACCTTCCTTACGATTTAACG,Distal Intergenic,8,115682942,115707096,24155,2,Maf-201,74281,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,7,23,17132,ENSMUSG00000055435,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg14676280,NA,NA,-0.712899876,NA,NA,NA,Srrm1,Srrm1_Exon,4,135346367,135346416,135346415,135346416,50,+,ACACTCACTCTGCTGTGACCTAATAAGGTGATGGTGCTATACTTCAGACG,"Exon (Srrm1-212/Srrm1, exon 3 of 16)",4,135320484,135353321,32838,2,Srrm1-203,6905,Srrm1-203;Srrm1-202;Srrm1-208;Srrm1-201;Srrm1-212;Srrm1-204;Srrm1-214;Srrm1-205;Srrm1-207;Srrm1-209;Srrm1-206,Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1;Srrm1,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,8,51796,ENSMUSG00000028809,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx1,
cg14689355.2,NA,NA,NA,NA,-1.664378154,-4.265412389,Acvr2a,Acvr2a_fiveUTR,2,48814452,48814501,48814452,48814453,50,+,CGGAGCTGACAGTGATTTTGACAGTGATTTAAACCCGCTTTTGTTGTTGT,Promoter (<=1kb),2,48814109,48903269,89161,1,Acvr2a-201,343,Acvr2a-201;Gm13489-201,Acvr2a;Gm13489,0;-3897,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,10,11480,ENSMUSG00000052155,conserved gene but different region,2,48813661,48814558,898,*,898,142,0.74610245,1.137266444,0.158129176,3.41E-140,CpGisland,TRUE,PromF4,
cg14699463,NA,-0.196336926,NA,NA,NA,NA,Chrd,Chrd_threeUTR,16,20736037,20736086,20736085,20736086,50,+,TCCTGCAAAGTGTCCTTTGTGGGGCTGATGCCCTGATCCCAGTCCAGACG,3' UTR,16,20733127,20738152,5026,1,Chrd-202,2910,Chrd-202;Chrd-201;Chrd-204;Chrd-205;Chrd-207;Chrd-209;Chrd-210;Chrd-208;Chrd-206;Chrd-203;Thpo-202,Chrd;Chrd;Chrd;Chrd;Chrd;Chrd;Chrd;Chrd;Chrd;Chrd;Thpo,0;0;0;0;0;0;0;2603;2534;-120;-1526,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,12667,ENSMUSG00000006958,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC5,
cg14705099,0.382226695,NA,NA,NA,NA,NA,Nkain2,Nkain2_fiveUTR,10,32889670,32889719,32889670,32889671,50,-,CGTGCACCTGCCACTGCAATAACCCATGGTTTCCGAGACCCCTGCCACAG,Promoter (<=1kb),10,31693637,32889696,1196060,2,Nkain2-204,0,Nkain2-203;Nkain2-204;Nkain2-205;Nkain2-206;Nkain2-201,Nkain2;Nkain2;Nkain2;Nkain2;Nkain2,0;0;0;0;743,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,5,432450,ENSMUSG00000069670,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg14732096,-1.146275425,NA,NA,NA,NA,NA,Arid5b,Arid5b_Promoter,10,68280022,68280071,68280070,68280071,50,-,AAACTTAAGAGCGACAGAACAAGGAACAGGCAGAGACTGCAAAGCCCTCG,Promoter (1-2kb),10,68092520,68278740,186221,2,Arid5b-204,-1331,Arid5b-204;Arid5b-201;Arid5b-202,Arid5b;Arid5b;Arid5b,0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,16,33,71371,ENSMUSG00000019947,conserved gene and region,10,68280070,68280167,98,*,98,9,0.612244898,1.055023923,0.091836735,7.73E-07,CpGisland,TRUE,,
cg14741527,NA,NA,NA,NA,-0.473693222,NA,Hsd17b12,Hsd17b12_Exon,2,94241371,94241420,94241371,94241372,50,-,CGCAAATGCTTTTTGGGGTAAGGGCTTCCGGCTATTGAGTTATGTACAGC,"Exon (Mir129b-201/Mir129b-201, exon 1 of 1)",2,94032689,94157964,125276,2,Hsd17b12-201,-83456,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,19,56348,ENSMUSG00000027195,mapped to different genes,2,94241115,94241769,655,*,655,63,0.630534351,0.978307255,0.096183206,7.48E-47,CpGisland,TRUE,BivProm1,
cg14769599,1.18848653,NA,NA,NA,NA,NA,Ncapg2,Ncapg2_Exon,12,116425797,116425846,116425797,116425798,50,-,CGATCAAATGCTGCATTGTTGTTTGTTGAAGCATTTCCTATTAGGGATCC,"Exon (Ncapg2-201/Ncapg2, exon 12 of 29)",12,116405402,116461611,56210,1,Ncapg2-201,20395,Ncapg2-201,Ncapg2,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,76044,ENSMUSG00000042029,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg14791398,NA,NA,NA,0.145493772,NA,NA,Satb1,Satb1_Exon,17,51809190,51809239,51809238,51809239,50,+,CACTCACATTGTTAGACATTTCTGAATGTTCTTTCCCCTGAGTTGCCTCG,"Exon (Satb1-208/Satb1, exon 2 of 11)",17,51736187,51832672,96486,2,Satb1-208,23433,Satb1-208;Satb1-213;Satb1-204;Satb1-214;Satb1-203;Satb1-211;Satb1-207;Satb1-206;Satb1-202;Satb1-201;Satb1-209;Satb1-210,Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1,0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,36,20230,ENSMUSG00000023927,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg14807945,NA,-0.00990258,NA,NA,NA,NA,Zeb2,Zeb2_Intron,2,45024643,45024692,45024691,45024692,50,-,CACTTGCCTTCCGAACAACTGCACAACAGGTGCAAATTAAAATGAAAACG,"Intron (Zeb2-212/Zeb2, intron 3 of 10)",2,44983632,45117395,133764,2,Zeb2-212,92703,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-227;Zeb2-216;Zeb2-229;Zeb2-218;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,103,158,24136,ENSMUSG00000026872,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg14817774,0.071026429,NA,NA,NA,NA,NA,Srsf7,Srsf7_threeUTR,17,80204884,80204933,80204884,80204885,50,+,CGATCACCGTCTCAAATTTTCTGCCCTTTAAAGAATAAGGTGAAGCTAGG,3' UTR,17,80200080,80207305,7226,2,Srsf7-201,2372,Srsf7-201;Srsf7-202;Srsf7-203;Srsf7-205;Srsf7-206;Srsf7-207;Srsf7-208;Srsf7-204;Ttc39d-202,Srsf7;Srsf7;Srsf7;Srsf7;Srsf7;Srsf7;Srsf7;Srsf7;Ttc39d,0;0;0;0;0;0;0;0;-2527,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,7,8,225027,ENSMUSG00000024097,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg14877464,0.000854272,0.070642977,NA,NA,NA,NA,Ap3b1,Ap3b1_Intergenic_downstream,13,94596541,94596590,94596541,94596542,50,-,CGGAAGAGCGCTTCTCCAAATTGAAATATAGCAGAGTTTACACTCCTGAT,Distal Intergenic,13,94542303,94547867,5565,1,Ap3b1-202,54287,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,33,55,11774,ENSMUSG00000021686,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg14898663,-0.559715769,NA,NA,NA,NA,NA,Nlrp1c-ps,Nlrp1c-ps_Intergenic_upstream,11,71409452,71409501,71409500,71409501,50,+,AAGGTCACCCTGTTCTTGGAATCTTTTATTAATGCTGAAGACTGGCCCCG,Distal Intergenic,11,71242430,71285232,42803,2,Nlrp1c-ps-201,-124220,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,2,2,627984,ENSMUSG00000092528,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC6,
cg14919009,0.46546617,NA,NA,NA,NA,NA,Rnf165,Rnf165_threeUTR,18,77458678,77458727,77458726,77458727,50,-,CATTTTTGTTTTTCTATCAGCTGAAATCGCTCTAGCATTTGCTCTACGCG,3' UTR,18,77456110,77565136,109027,2,Rnf165-201,106409,Rnf165-201;Rnf165-202;Rnf165-207,Rnf165;Rnf165;Rnf165,0;0;8421,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,10,21,225743,ENSMUSG00000025427,conserved gene and region,18,77458705,77458805,101,*,101,9,0.603960396,0.977419355,0.089108911,1.00E-06,CpGisland,TRUE,TxWk1,
cg14924324,0.221149946,NA,NA,NA,NA,NA,Pou2f2,Pou2f2_Intron,7,25134761,25134810,25134809,25134810,50,+,AAGGAGACGTAGGGGGCTCCCCAGGGCCAGCGGGGCTGGTAACTGACACG,"Intron (Pou2f2-208/Pou2f2, intron 2 of 4)",7,25120618,25179726,59109,2,Pou2f2-208,44916,Pou2f2-203;Pou2f2-209;Pou2f2-201;Pou2f2-206;Pou2f2-204;Pou2f2-205;Pou2f2-202;Pou2f2-210;Pou2f2-208,Pou2f2;Pou2f2;Pou2f2;Pou2f2;Pou2f2;Pou2f2;Pou2f2;Pou2f2;Pou2f2,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,11,29,18987,ENSMUSG00000008496,mapped to different genes,7,25134752,25134975,224,*,224,23,0.629464286,1.037872683,0.102678571,4.08E-18,CpGisland,TRUE,EnhA7,
cg14940373,NA,-0.017471927,NA,NA,NA,NA,Hoxc11,Hoxc11_Promoter,15,102955356,102955405,102955404,102955405,50,-,TTTTATTATAACCTACAAAGCCCTCTCTCCCAACGACTCGACTTTTTACG,Promoter (<=1kb),15,102954427,102957708,3282,1,Hoxc11-201,929,Hoxc11-201,Hoxc11,0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,12,24,109663,ENSMUSG00000001656,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg14991487,NA,NA,NA,NA,1.462856492,NA,Hoxd9,Hoxd9_fiveUTR,2,74697885,74697934,74697933,74697934,50,-,CCCCAGTTTAGCGGACTGATTTACTCCCGGTATTGGTAAATATGATCACG,Promoter (<=1kb),2,74697727,74700208,2482,1,Hoxd9-201,158,Hoxd10-201;Hoxd9-201,Hoxd10;Hoxd9,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,8,15438,ENSMUSG00000043342,mapped to different genes,2,74697896,74698814,919,*,919,110,0.717083787,0.931104357,0.119695321,7.60E-93,CpGisland,TRUE,BivProm1,
cg15012446,NA,NA,NA,NA,-0.260420923,NA,Ctnna2,Ctnna2_Exon,6,77243850,77243899,77243898,77243899,50,+,GATCACAATCACATCTGCTCCGTGCAGGGGGACGCCTTTCAGAAACTGCG,"Exon (Lrrtm1-201/Lrrtm1, exon 2 of 3)",6,76881637,77979699,1098063,2,Ctnna2-204,735800,Ctnna2-204;Ctnna2-205;Ctnna2-202;Ctnna2-201;Lrrtm1-201;Lrrtm1-202;Lrrtm1-203;Lrrtm1-204,Ctnna2;Ctnna2;Ctnna2;Ctnna2;Lrrtm1;Lrrtm1;Lrrtm1;Lrrtm1,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,24,12386,ENSMUSG00000063063,conserved gene and region,6,77243660,77243918,259,*,259,23,0.633204633,0.885930993,0.088803089,1.29E-16,CpGisland,TRUE,BivProm2,
cg15036140,-0.01288242,NA,NA,NA,NA,NA,Rab14,Rab14_fiveUTR,2,35200985,35201034,35200985,35200986,50,-,CGGCGCTCCCTGCACAGGGTTTCCTGTCACCCTCGCAATGGGCCGGACCA,Promoter (<=1kb),2,35180205,35201120,20916,2,Rab14-201,86,Rab14-201;Rab14-202;Rab14-213;Rab14-211;Rab14-206;Rab14-207;Rab14-210;Rab14-203,Rab14;Rab14;Rab14;Rab14;Rab14;Rab14;Rab14;Rab14,0;0;0;-13;-196;-38;-3;-7,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,3,68365,ENSMUSG00000026878,conserved gene but different region,2,35200791,35201385,595,*,595,58,0.660504202,0.899353695,0.097478992,1.52E-43,CpGisland,TRUE,PromF4,
cg15051314,-0.04459917,NA,NA,NA,NA,NA,Upf1,Upf1_Exon,8,70335243,70335292,70335291,70335292,50,-,TTGGTGTGCAGGGAGCCGCTGAACTGCATGTACTGCACCAGGTAGGAGCG,"Exon (Upf1-202/Upf1, exon 17 of 24)",8,70331525,70353211,21687,2,Upf1-202,17919,Cers1-203;Cers1-202;Gdf1-201;Upf1-202;Upf1-201,Cers1;Cers1;Gdf1;Upf1;Upf1,19468;19456;5426;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,19704,ENSMUSG00000058301,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg15053735,NA,NA,NA,NA,0.167897317,NA,Zeb2,Zeb2_Intron,2,45038583,45038632,45038583,45038584,50,-,CGGGATAATTGATGTGTAGATTGCAGCATGAACAAATGCTTTGACTTGTT,"Intron (Zeb2-212/Zeb2, intron 3 of 10)",2,44983632,45117395,133764,2,Zeb2-212,78763,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-216;Zeb2-218;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,103,158,24136,ENSMUSG00000026872,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg15091495,NA,NA,NA,8.11E-05,NA,NA,Antxr2,Antxr2_Intron,5,97935163,97935212,97935211,97935212,50,-,AGACTTCGATCTGTACCTGCTGTCCCCTGTCACTCCCTGGAAACTTGGCG,"Intron (Antxr2-201/Antxr2, intron 16 of 16)",5,97882783,98030962,148180,2,Antxr2-201,95750,Antxr2-201;Antxr2-202,Antxr2;Antxr2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,71914,ENSMUSG00000029338,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA19,
cg15168457,0.529414447,NA,NA,NA,NA,NA,Atxn2,Atxn2_Exon,5,121781300,121781349,121781348,121781349,50,+,TTATACTTTCCTTCATATCATTTGTTCTGTCAGGTGTTCCCTGGCCATCG,"Exon (Atxn2-201/Atxn2, exon 10 of 25)",5,121711609,121814950,103342,1,Atxn2-201,69691,Atxn2-201;Atxn2-220;Atxn2-209;Atxn2-208;Atxn2-219;Atxn2-214;Atxn2-202,Atxn2;Atxn2;Atxn2;Atxn2;Atxn2;Atxn2;Atxn2,0;0;0;0;0;0;-3725,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,16,20239,ENSMUSG00000042605,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg15258337,-0.646883876,NA,NA,NA,NA,NA,Pknox1,Pknox1_fiveUTR,17,31564858,31564907,31564906,31564907,50,-,GCTTGTCAGTGTGATGAAGATTGGCACCCAGGTAAGCTGTCACTCAACCG,Promoter (<=1kb),17,31564862,31605492,40631,1,Pknox1-202,0,Pknox1-201;Pknox1-206;Pknox1-212;Pknox1-209;Pknox1-202;Pknox1-208,Pknox1;Pknox1;Pknox1;Pknox1;Pknox1;Pknox1,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,8,8,18771,ENSMUSG00000006705,conserved gene but different region,17,31564906,31565621,716,*,716,118,0.791899441,1.06992883,0.164804469,2.89E-119,CpGisland,TRUE,TSS2,
cg15330117,-0.335676238,NA,NA,NA,NA,NA,Gata3,Gata3_fiveUTR,2,9878571,9878620,9878571,9878572,50,+,CGCCAGGCAGCTCAGTGTTCGCAGACAGCTGTGGCGCGACGCAACTTAAG,Promoter (<=1kb),2,9857078,9878600,21523,2,Gata3-201,0,4930412O13Rik-201;4930412O13Rik-202;9230102O04Rik-202;9230102O04Rik-201;Gata3-201;Gata3-205;Gata3-206;Gata3-202;Gata3-204;Gata3-203,4930412O13Rik;4930412O13Rik;9230102O04Rik;9230102O04Rik;Gata3;Gata3;Gata3;Gata3;Gata3;Gata3,-2632;-4016;10920;5373;0;0;-3172;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,5,21,14462,ENSMUSG00000015619,conserved gene and region,2,9878568,9878714,147,*,147,12,0.639455782,0.804377565,0.081632653,1.97E-08,CpGisland,TRUE,,
cg15338129,-0.213846326,NA,NA,NA,NA,NA,Dcaf5,Dcaf5_Exon,12,80436283,80436332,80436283,80436284,50,-,CGCAGGCGTCTCCTCTGAAAGTCCTGAGTGAGCAGGGGGTCCCCATGCAA,Promoter (<=1kb),12,80335848,80436601,100754,2,Dcaf5-201,269,Dcaf5-201;Dcaf5-202,Dcaf5;Dcaf5,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,6,320808,ENSMUSG00000049106,conserved gene and region,,,,,,,,,,,,,TRUE,PromF4,
cg15346475,NA,NA,NA,NA,NA,-0.094220279,Fads2,Fads2_Exon,19,10064715,10064764,10064715,10064716,50,-,CGGCTTCTCCTGGTATTCAATGCCATGCTTGGCACATAGAGACTTCACCA,"Exon (Fads2-201/Fads2, exon 11 of 12)",19,10062765,10101746,38982,2,Fads2-201,36982,Fads2-201;Fads2-203;Fads2-202;Fads3-201,Fads2;Fads2;Fads2;Fads3,0;0;23952;23146,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,56473,ENSMUSG00000024665,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg15378021,NA,NA,NA,NA,NA,0.886419847,Vipr1,Vipr1_Exon,9,121664622,121664671,121664670,121664671,50,+,CGTCTCCTTCTTCTCTGAGCGGAAGTACTTCTGGGGGTACATACTCATCG,"Exon (Vipr1-201/Vipr1, exon 7 of 13)",9,121642716,121672954,30239,1,Vipr1-201,21906,Vipr1-201;Vipr1-203;Vipr1-202;Vipr1-204,Vipr1;Vipr1;Vipr1;Vipr1,0;21571;0;-4042,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,22354,ENSMUSG00000032528,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg15426572,NA,NA,NA,-0.123924205,NA,NA,Fgf18,Fgf18_Promoter,11,33146292,33146341,33146292,33146293,50,-,CGAGTCTGAAAGCTGCTGAAGTAACAGATCAGATTTTAGCAAGTGCTTTC,Promoter (<=1kb),11,33117430,33146795,29366,2,Fgf18-202,454,Fgf18-202;Fgf18-201,Fgf18;Fgf18,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,4,6,14172,ENSMUSG00000057967,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg15463975,NA,NA,NA,NA,-1.281721877,-0.957141938,Six1,Six1_Intron,12,73041351,73041400,73041351,73041352,50,+,CGCAGCGTCCTTTGAAGCCTGTCAGGGTCATTGAAAGCTATCTTTGTGCA,"Intron (Six1-204/Six1, intron 1 of 1)",12,73040015,73042815,2801,2,Six1-204,1415,Six1-204;Six1-201;Six1-203;Six1-202,Six1;Six1;Six1;Six1,0;0;0;3891,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,10,18,20471,ENSMUSG00000051367,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm4,
cg15484756,NA,NA,NA,NA,-0.91091588,NA,Dnajc13,Dnajc13_Exon,9,104209311,104209360,104209359,104209360,50,-,TAGAAGAGATCCCAATTTGCTTCTATTTTTATTCTTTGTCTTCTCTTTCG,"Exon (Dnajc13-201/Dnajc13, exon 21 of 56)",9,104151282,104262930,111649,2,Dnajc13-201,53570,Dnajc13-201;Dnajc13-203,Dnajc13;Dnajc13,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,3,235567,ENSMUSG00000032560,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg15503346,NA,0.323000729,NA,NA,NA,0.545375539,Gm6411,Gm6411_Intron,13,83732275,83732324,83732275,83732276,50,-,CGTAGTGTGGGGACTGAAAAAGACCGTGGCAATGGATGAACAATAGGGCT,"Intron (C130071C03Rik-201/C130071C03Rik-201, intron 1 of 3)",13,83761132,83762335,1204,2,Gm6411-201,30060,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,36,623241,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg15571405,NA,NA,-0.302433012,NA,NA,NA,Gm13835,Gm13835_Intron,6,31221702,31221751,31221750,31221751,50,+,TGCCTCACACCCACATATCTTGTTTTCCTAATTTGATTTCTGTATTTGCG,"Intron (2210408F21Rik-208/2210408F21Rik-208, intron 1 of 5)",6,31141979,31142663,685,2,Gm13835-201,-79039,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,100038973,NA,mapped to different genes,,,,,,,,,,,,,TRUE,PromF2,
cg15594409,NA,NA,NA,NA,-0.70414845,NA,Mylk,Mylk_Exon,16,34914961,34915010,34915009,34915010,50,-,TGAGGACGTGTTCACCCTGGTTCTAAAGAAGGTGCAGCCCTGGCATGCCG,"Exon (Mylk-201/Mylk, exon 14 of 32)",16,34784921,35002420,217500,1,Mylk-201,130040,Mylk-201;Mylk-207;Mylk-208,Mylk;Mylk;Mylk,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,7,107589,ENSMUSG00000022836,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg15601638,-0.380079074,NA,NA,NA,NA,NA,Ehbp1,Ehbp1_Exon,11,22053401,22053450,22053449,22053450,50,-,AAACTGTTTACAGTGTAATTGGGCACCGTACCTGTGTCCATGAGATAGCG,"Exon (Ehbp1-201/Ehbp1, exon 20 of 24)",11,22005828,22285838,280011,2,Ehbp1-201,232388,Ehbp1-201;Ehbp1-202;Ehbp1-207,Ehbp1;Ehbp1;Ehbp1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,45,216565,ENSMUSG00000042302,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx3,
cg15608939,NA,NA,NA,NA,-0.129809285,NA,Ntn1,Ntn1_Intron,11,68399764,68399813,68399812,68399813,50,-,ACCTCTGTTCAGATTAGCCCGGGGGATGAATGCACCCATTATCCAGCCCG,"Intron (Ntn1-202/Ntn1, intron 2 of 7)",11,68209364,68400823,191460,2,Ntn1-202,1010,Ntn1-202,Ntn1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,6,18208,ENSMUSG00000020902,conserved gene but different region,11,68399783,68400438,656,*,656,66,0.704268293,0.820995146,0.100609756,1.95E-50,CpGisland,TRUE,BivProm1,
cg15631634,NA,NA,0.032043455,NA,NA,NA,E2f3,E2f3_Exon,13,29918758,29918807,29918758,29918759,50,-,CGTATCATACCGCGTTTTTTCTGAGGGAGATTTTGGAGCTTAAAGAAAAA,"Exon (E2f3-203/E2f3, exon 3 of 7)",13,29906575,29984391,77817,2,E2f3-203,65584,E2f3-203;E2f3-204;E2f3-201;E2f3-202,E2f3;E2f3;E2f3;E2f3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,10,13557,ENSMUSG00000016477,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg15647529,NA,NA,NA,0.016157732,NA,NA,Rsrc1,Rsrc1_Intron,3,67232975,67233024,67232975,67232976,50,-,CGGCTTCTGCTGTGTTGCCTTGAAATTTATTATTCTGGAGATTTAAAGAA,"Intron (Rsrc1-206/Rsrc1, intron 6 of 9)",3,66981390,67356559,375170,1,Rsrc1-206,251585,Rsrc1-206;Rsrc1-203;Rsrc1-202;Rsrc1-201;Rsrc1-209;Rsrc1-205,Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1;Rsrc1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,37,66880,ENSMUSG00000034544,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk8,
cg15701287,NA,-0.136925697,NA,NA,NA,NA,Myo18a,Myo18a_Intron,11,77858719,77858768,77858767,77858768,50,+,ACAATAGTCTAATTTACATGACATTCTCCATGAAGCTATTTTCACTGACG,"Intron (Myo18a-208/Myo18a, intron 41 of 41)",11,77763246,77865980,102735,1,Myo18a-208,95473,Myo18a-208;Myo18a-209;Myo18a-207;Myo18a-201;Myo18a-203;Myo18a-222;Myo18a-223;Myo18a-211;Myo18a-205;Myo18a-210;Myo18a-224;Myo18a-202;Myo18a-220;Myo18a-221;Myo18a-215;Myo18a-216,Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a;Myo18a,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,18,360013,ENSMUSG00000000631,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg15708373,-0.125754403,NA,NA,NA,NA,NA,Zbtb10,Zbtb10_Promoter,3,9249929,9249978,9249977,9249978,50,+,CTGGTGATGTAACACCCATGTCAATACTTCCCAGTGAACGCACGTGTTCG,Promoter (<=1kb),3,9250602,9285333,34732,1,Zbtb10-201,-624,Zbtb10-201,Zbtb10,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,4,9,229055,ENSMUSG00000069114,conserved gene but different region,,,,,,,,,,,,,TRUE,TSS1,D?
cg15710854,-0.218842144,NA,NA,NA,NA,NA,Rab3ip,Rab3ip_Promoter,10,116949397,116949446,116949445,116949446,50,+,AGGCCCCATAAAACTGGTGAAATATTTAACAGTATCAAATATTTACTACG,Promoter (<=1kb),10,116905784,116950380,44597,2,Rab3ip-201,934,Rab3ip-201;Rab3ip-203;Rab3ip-205;Rab3ip-202,Rab3ip;Rab3ip;Rab3ip;Rab3ip,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,1,2,216363,ENSMUSG00000064181,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg15713630,NA,NA,NA,NA,0.471780283,NA,Lmx1a,Lmx1a_Intron,1,167802943,167802992,167802991,167802992,50,+,AATTAGAGCCTCCCCTGAGTTCTAATGCCCAATCCTGAGTAAACAAGCCG,"Intron (Lmx1a-202/Lmx1a, intron 4 of 8)",1,167689237,167848741,159505,1,Lmx1a-202,113706,Lmx1a-202;Lmx1a-201,Lmx1a;Lmx1a,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,4,6,110648,ENSMUSG00000026686,conserved gene and region,1,167802691,167803010,320,*,320,17,0.559375,0.679151061,0.053125,7.75E-09,CpGisland,TRUE,BivProm1,
cg15735715,NA,NA,NA,NA,-0.277213097,-0.57779811,Usp24,Usp24_Exon,4,106402033,106402082,106402081,106402082,50,-,ATTCCAGGTTCATCACTCATTAAACCATTGTTAGATGACTTCCTTTTCCG,"Exon (Usp24-204/Usp24, exon 41 of 68)",4,106316213,106441317,125105,1,Usp24-204,85820,Usp24-204;Usp24-201,Usp24;Usp24,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,5,329908,ENSMUSG00000028514,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg15756032,NA,NA,NA,NA,0.076994464,NA,Uroc1,Uroc1_Exon,6,90355271,90355320,90355319,90355320,50,-,CAGGTGGTGGGCTCCCAGGCAAGGATCCTGTACTCAGACCAGAAGGGCCG,"Exon (Uroc1-201/Uroc1, exon 16 of 20)",6,90333284,90364551,31268,1,Uroc1-201,21987,Uroc1-201;Uroc1-202,Uroc1;Uroc1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,243537,ENSMUSG00000034456,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC7,
cg15776582,NA,NA,NA,NA,-0.816424945,NA,Unc79,Unc79_fiveUTR,12,102949365,102949414,102949413,102949414,50,-,TCCGGGACCGAATTCTGCAATTTGATGTGCGTTTTGTCCGAATGGTAGCG,Promoter (<=1kb),12,102948859,103184001,235143,1,Unc79-202,506,Unc79-202;Unc79-208,Unc79;Unc79,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,12,24,217843,ENSMUSG00000021198,conserved gene and region,12,102948810,102949512,703,*,703,59,0.644381223,0.809149434,0.083926031,2.91E-40,CpGisland,TRUE,TSS2,
cg15779017,NA,NA,NA,NA,-0.001909492,NA,Lmx1a,Lmx1a_Exon,1,167692001,167692050,167692049,167692050,50,+,TCTGTCTGCGAGGGCTGTCAGCGGGTCATCTTGGACAGGTTTCTGCTGCG,"Exon (Lmx1a-202/Lmx1a, exon 3 of 9)",1,167689237,167848741,159505,1,Lmx1a-202,2764,Lmx1a-202;Lmx1a-201,Lmx1a;Lmx1a,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,6,110648,ENSMUSG00000026686,conserved gene and region,1,167691914,167692082,169,*,169,11,0.609467456,0.720542636,0.065088757,9.17E-07,CpGisland,TRUE,,
cg15794906,NA,NA,NA,NA,-0.499860241,NA,Gm48316,Gm48316_Intergenic_upstream,13,94710276,94710325,94710324,94710325,50,+,AAACTGCAAATTATCCAGCAGCGGCCCTGTTCCCGTCTACCAGCAGCTCG,Distal Intergenic,13,94752270,94752593,324,1,Gm48316-201,-41945,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,36,42,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg15810551,NA,NA,NA,NA,-0.267234431,NA,Kiz,Kiz_Intron,2,146834475,146834524,146834523,146834524,50,+,ACAACAATATCAATTAATCATGCAGCGGGCAAACAAGGAGATTTATCCCG,"Intron (Gm14114-201/Gm14114-201, intron 1 of 1)",2,146855864,146970097,114234,1,Kiz-201,-21340,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,29,228730,ENSMUSG00000074749,mapped to different genes,2,146834500,146834593,94,*,94,8,0.531914894,1.205128205,0.085106383,7.36E-06,CpGisland,TRUE,BivProm1,
cg15836647,NA,NA,NA,NA,-1.296821145,NA,Ostm1,Ostm1_Intron,10,42632578,42632627,42632626,42632627,50,+,TTACAGGCACAGAATGGGCAATCCCTTGATCCCCGTCAATTGTCATCCCG,"Intron (Ostm1-202/Ostm1, intron 2 of 5)",10,42583835,42698323,114489,1,Ostm1-202,48743,Ostm1-202;Ostm1-203,Ostm1;Ostm1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,22,14628,ENSMUSG00000038280,conserved gene and region,10,42632523,42632647,125,*,125,9,0.528,1.057330827,0.072,5.84E-06,CpGisland,TRUE,BivProm1,
cg15889617,-0.057008173,NA,-0.199730203,NA,NA,NA,Dpf1,Dpf1_Exon,7,29309698,29309747,29309698,29309699,50,-,CGGAGACTCAACATCCTGGAGGACCCCAGACTCAGGCCCTGCGAGTACAA,"Exon (Dpf1-204/Dpf1, exon 3 of 12)",7,29303951,29317264,13314,1,Dpf1-204,5747,Dpf1-204;Dpf1-201;Dpf1-203;Dpf1-208;Dpf1-202;Dpf1-210;Dpf1-207;Dpf1-205;Dpf1-209;Dpf1-206,Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1;Dpf1,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,4,29861,ENSMUSG00000030584,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg15936060,-0.067672351,NA,NA,NA,NA,NA,Efcab11,Efcab11_Intron,12,99737438,99737487,99737486,99737487,50,+,CCATTATCTAGTTTCTCCTGCCTCCAGGCAGGGCCACATCATTGATTACG,"Intron (Efcab11-205/Efcab11, intron 5 of 5)",12,99693045,99883423,190379,2,Efcab11-205,145936,Efcab11-205;Efcab11-201;Efcab11-207;Efcab11-202,Efcab11;Efcab11;Efcab11;Efcab11,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,78767,ENSMUSG00000021176,mapped to different genes,,,,,,,,,,,,,TRUE,Acet5,
cg15985773,NA,-0.02841432,NA,NA,NA,NA,Atad2b,Atad2b_Exon,12,5031501,5031550,5031501,5031502,50,-,CGGAGAAAATCAAGGCGGAGATCACAGTGGGGTAAAGGAATTATTAAGAA,"Exon (Atad2b-201/Atad2b, exon 28 of 31)",12,4917404,5047394,129991,1,Atad2b-201,114097,Atad2b-201,Atad2b,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,7,320817,ENSMUSG00000052812,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh8,
cg16018837,-0.005590479,NA,NA,NA,NA,NA,Fam160a2,Fam160a2_threeUTR,7,105381392,105381441,105381392,105381393,50,-,CGCACACCTGCAGCAGGGACTTGACACTGGGCTGGAAGACCATGTTGGTG,3' UTR,7,105371211,105400054,28844,2,Fam160a2-208,18613,Fam160a2-208;Fam160a2-213;Fam160a2-206;Fam160a2-201;Fam160a2-203;Fam160a2-202;Fam160a2-204;Fam160a2-210;Fam160a2-207;Fam160a2-211;Fam160a2-212;Fam160a2-205;Gm5901-203;Gm5901-201;Gm5901-202,Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Fam160a2;Gm5901;Gm5901;Gm5901,0;0;0;0;0;0;0;0;0;0;8073;7670;6354;6342;3569,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,5,74349,ENSMUSG00000044465,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg16023341,NA,0.241684272,NA,NA,NA,0.883333061,Cadps2,Cadps2_Intron,6,23273236,23273285,23273284,23273285,50,+,AATAGAAATTGACAAACCTCATCTCCTAAATAGTGCAGCTGAGCCGGGCG,"Intron (Cadps2-213/Cadps2, intron 28 of 29)",6,23262773,23839137,576365,2,Cadps2-213,565852,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-211;Cadps2-207;Cadps2-202;Cadps2-210,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg16062897,-0.003645706,NA,NA,NA,NA,NA,Zfp536,Zfp536_Exon,7,37773104,37773153,37773152,37773153,50,-,CAGAGACTGAACCCTTGATATAATAATCTACAAAGAATGGTGTGTGATCG,Promoter (<=1kb),7,37569629,37773641,204013,2,Zfp536-208,488,Zfp536-202;Zfp536-201;Zfp536-203;Zfp536-206;Zfp536-209;Zfp536-208;Zfp536-205;Zfp536-207;Zfp536-210,Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536;Zfp536,0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,13,112,243937,ENSMUSG00000043456,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm2,
cg16113298,0.412184362,NA,NA,NA,NA,NA,Pax6,Pax6_fiveUTR,2,105675534,105675583,105675582,105675583,50,-,TGGAGGATGATGACAGAGGTCAGGCTTCGCTAATGGGCCAGTGAGGAGCG,5' UTR,2,105668900,105697364,28465,1,Pax6-206,6634,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-217;Pax6-226;Pax6-220;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,15,78,18508,ENSMUSG00000027168,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg16159306,NA,NA,-0.15454767,NA,NA,NA,Zdhhc17,Zdhhc17_threeUTR,10,110962351,110962400,110962351,110962352,50,+,CGGTCCAGCTGAGCATCCCTTCCACTAGAGGGCCATGTGACACCTAAGGA,3' UTR,10,110941780,111010066,68287,2,Zdhhc17-201,47666,Zdhhc17-201;Zdhhc17-203;Zdhhc17-210;Zdhhc17-207;Zdhhc17-206;Zdhhc17-202,Zdhhc17;Zdhhc17;Zdhhc17;Zdhhc17;Zdhhc17;Zdhhc17,0;0;0;-1268;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,4,320150,ENSMUSG00000035798,conserved gene and region,,,,,,,,,,,,,TRUE,Dse1,
cg16171324,0.46056704,NA,NA,NA,NA,NA,Gm50479,Gm50479_Exon,8,26432207,26432256,26432207,26432208,50,-,CGAAGATAATTGTTTCATCCACTTTGTCAAAGCTGAAATGAAAAGAGGGC,"Exon (Gm31898-201/Gm31898-201, exon 4 of 7)",8,26237222,26237407,186,1,Gm50479-201,195034,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,21,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Acet5,
cg16184756,0.159110592,NA,NA,NA,NA,NA,Nkx2-1,Nkx2-1_Exon,12,56535316,56535365,56535316,56535317,50,-,CGCTAAAGCAACAAGACAATAGAAGCCTACATCTTGCCCGAGATAATTAG,"Exon (Gm26973-202/Gm26973-202, exon 1 of 3)",12,56531958,56536908,4951,2,Nkx2-1-201,1543,Nkx2-1-202;Nkx2-1-201,Nkx2-1;Nkx2-1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,29,21869,ENSMUSG00000001496,mapped to different genes,12,56535178,56535355,178,*,178,14,0.573033708,0.967391304,0.078651685,1.48E-09,CpGisland,TRUE,BivProm2,
cg16222297,-0.044246462,NA,NA,NA,NA,NA,Trpm4,Trpm4_threeUTR,7,45319289,45319338,45319289,45319290,50,-,CGCGGTTCCAAGCCACAGCCAAACGCAGCTCATCCAGGTAGGCTGAGGCC,3' UTR,7,45302632,45333768,31137,2,Trpm4-208,14430,Trpm4-208;Trpm4-201;Trpm4-209,Trpm4;Trpm4;Trpm4,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,68667,ENSMUSG00000038260,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg16242634,0.022833036,NA,NA,NA,NA,NA,Herc1,Herc1_Exon,9,66418392,66418441,66418440,66418441,50,+,ACAGAAATCTTTCAGTGTTTCCTCTCAGCCCGTGAAGTAGCTCGTAGCCG,"Exon (Herc1-201/Herc1, exon 23 of 78)",9,66350526,66508775,158250,1,Herc1-201,67866,Herc1-201,Herc1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,15,235439,ENSMUSG00000038664,conserved gene and region,,,,,,,,,,,,,TRUE,Tx5,
cg16255876,NA,-0.001299071,NA,-0.135242388,NA,NA,Gm7382,Gm7382_Intergenic_upstream,15,40475820,40475869,40475820,40475821,50,+,CGCTGAAAACCTTTGAAACCACAAATGCTAACCTACCTGGCCTGCAGCCA,Distal Intergenic,15,40537321,40538425,1105,1,Gm7382-201,-61452,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,2,22,664872,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg16257604,NA,NA,0.147788145,NA,NA,NA,Polr2a,Polr2a_Exon,11,69746376,69746425,69746376,69746377,50,-,CGCAGCTGATTGTTGATCTTCACGATGTCAGCCAGTTTGTGAGTCAGGTC,"Exon (Polr2a-201/Polr2a, exon 6 of 29)",11,69733997,69758637,24641,2,Polr2a-201,12212,Polr2a-201;Polr2a-202;Polr2a-203,Polr2a;Polr2a;Polr2a,0;0;-3805,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,20020,ENSMUSG00000005198,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg16335529,NA,NA,0.304660034,NA,NA,NA,Entpd7,Entpd7_Exon,19,43725491,43725540,43725491,43725492,50,+,CGCATTGGTGGCCGCTACCATGGGCCAACATTTGCCAAGGCTGCTCAGGT,"Exon (Entpd7-201/Entpd7, exon 10 of 13)",19,43689672,43733697,44026,1,Entpd7-201,35819,Entpd7-201;Entpd7-204;Entpd7-202,Entpd7;Entpd7;Entpd7,0;35651;-827,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,93685,ENSMUSG00000025192,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx3,
cg16392817,NA,NA,0.175719877,NA,NA,NA,Gas1,Gas1_Intergenic_downstream,13,60133736,60133785,60133784,60133785,50,+,TTAACATATTTATGACCCCAGCTTTCTCTCTGTTCTCTGAGACTGTACCG,Distal Intergenic,13,60175787,60176941,1155,2,Gas1-202,43156,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,7,10,14451,ENSMUSG00000052957,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg16435898,NA,NA,NA,NA,-0.058974071,0.027536314,Foxg1,Foxg1_Exon,12,49385191,49385240,49385191,49385192,50,-,CGCCACTACGACGACCCGGGCAAGGGCAACTACTGGATGCTGGACCCGTC,"Exon (Foxg1-204/Foxg1, exon 1 of 1)",12,49382883,49386855,3973,1,Foxg1-204,2308,Foxg1-202;Foxg1-203;Foxg1-204;Foxg1-201;Gm43517-201,Foxg1;Foxg1;Foxg1;Foxg1;Gm43517,0;2391;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,27,15228,ENSMUSG00000020950,conserved gene and region,12,49385116,49385808,693,*,693,72,0.670995671,0.980968858,0.103896104,4.68E-56,CpGisland,TRUE,BivProm2,
cg16448606,NA,NA,NA,NA,-0.056949889,-0.153093422,Trps1,Trps1_Intron,15,50698233,50698282,50698233,50698234,50,+,CGTGCTCAGAAGTGTTGAAAGAAAGGCCCATTCTCTGCCCAGGGAATTGC,"Intron (Trps1-202/Trps1, intron 4 of 5)",15,50654752,50889691,234940,2,Trps1-202,191409,Trps1-202;Trps1-206;Trps1-204;Trps1-205;Trps1-207;Trps1-201,Trps1;Trps1;Trps1;Trps1;Trps1;Trps1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,36,83925,ENSMUSG00000038679,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg16477041,NA,NA,NA,NA,-0.387573789,NA,Gm12684,Gm12684_Intergenic_upstream,4,99444842,99444891,99444890,99444891,50,-,ATTATAATGCATGGATATAACTTATAACATGAATCAATGTCATCAAGACG,Distal Intergenic,4,99430256,99431254,999,2,Gm12684-201,-13637,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,8,8,665212,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC2,
cg16555117,-0.15290047,NA,NA,NA,NA,NA,Vegfa,Vegfa_Exon,17,46021035,46021084,46021035,46021036,50,-,CGAGTCTGTGTTTTTGCAGGAACATTTACACGTCTGCGGATCTTGTACAA,"Exon (Vegfa-202/Vegfa, exon 6 of 7)",17,46016993,46031815,14823,2,Vegfa-201,10731,Vegfa-201;Vegfa-202;Vegfa-210;Vegfa-207;Vegfa-205;Vegfa-208;Vegfa-204;Vegfa-206;Vegfa-203;Vegfa-209,Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa;Vegfa,0;0;0;0;0;0;0;0;0;10272,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,7,22339,ENSMUSG00000023951,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg16561874,NA,NA,NA,NA,0.080201455,NA,Unc79,Unc79_fiveUTR,12,102949355,102949404,102949403,102949404,50,-,TTCCTAACCTTCCGGGACCGAATTCTGCAATTTGATGTGCGTTTTGTCCG,Promoter (<=1kb),12,102948859,103184001,235143,1,Unc79-202,496,Unc79-202;Unc79-208,Unc79;Unc79,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,12,24,217843,ENSMUSG00000021198,conserved gene and region,12,102948810,102949512,703,*,703,59,0.644381223,0.809149434,0.083926031,2.91E-40,CpGisland,TRUE,TSS2,
cg16588616,NA,NA,NA,NA,0.494845494,NA,Sp8,Sp8_Promoter,12,118840924,118840973,118840972,118840973,50,-,GGCCGAAATAACGTGGCCATTATGGCCTGAAATGGGCCAGGTTTGAAGCG,Promoter (5-6kb),12,118846329,118852576,6248,1,Sp8-201,-5405,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,29,320145,ENSMUSG00000048562,conserved gene and region,12,118840863,118841021,159,*,159,10,0.503144654,0.999371464,0.062893082,4.67E-06,CpGisland,TRUE,ReprPC1,
cg16595936,0.191799052,NA,NA,NA,NA,NA,Lbx1,Lbx1_Intergenic_downstream,19,45229271,45229320,45229319,45229320,50,+,CCAGCTCGTCCCTTTCAGGGGGGACTCATGCATCAAACTTCAATTTTCCG,Distal Intergenic,19,45232684,45235812,3129,2,Lbx1-201,6492,Lbx1-201,Lbx1,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,30,50,16814,ENSMUSG00000025216,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg16625559,0.283140712,NA,NA,NA,NA,NA,Dcdc5,Dcdc5_Intron,2,106133378,106133427,106133378,106133379,50,+,CGATTGCTGGGGCCACAGTGTTGGTACTCTTATTTTGCTGTGCCACCTTT,"Intron (Dcdc5-203/Dcdc5, intron 8 of 8)",2,106003336,106157718,154383,1,Dcdc5-203,130042,Dcdc5-203;Dcdc5-202,Dcdc5;Dcdc5,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,20,22,329482,ENSMUSG00000074981,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk4,
cg16658949,NA,NA,NA,NA,0.269962291,NA,Auts2,Auts2_Intergenic_upstream,5,132859017,132859066,132859065,132859066,50,+,GAACTCTGTTGCCTAGCAACCAATGGAACATTACAACACTAGATAAATCG,Distal Intergenic,5,131437333,132543344,1106012,2,Auts2-207,-315673,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,1,1,319974,ENSMUSG00000029673,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg16677609,NA,NA,0.191024197,NA,NA,NA,Gm47909,Gm47909_Intergenic_upstream,14,25109060,25109109,25109060,25109061,50,+,CGACCTTTGGGGCCTGGTGGTTGTTAATGCATGAGTGACTGCCTGCATTG,Distal Intergenic,14,25089939,25090406,468,2,Gm47909-201,-18654,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,4,17,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg16691593,NA,NA,0.409958478,NA,0.638721193,NA,Otp,Otp_Promoter,13,94875509,94875558,94875509,94875510,50,-,CGCTGACATTTGCAGGCTGCCCTCCTGATTGGTCCCCTCGCCGAGCTGCT,Promoter (<=1kb),13,94875602,94885130,9529,1,Otp-201,-93,Otp-201,Otp,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene but different region,13,94875299,94875591,293,*,293,22,0.682593857,0.651111111,0.075085324,2.54E-14,CpGisland,TRUE,BivProm2,
cg16709039,NA,NA,NA,NA,-0.944630228,NA,Maml3,Maml3_Intron,3,51701692,51701741,51701692,51701693,50,+,CGGCGTGATGGACATCACACACGACAGCCTGAGACAATCCAGGAATTCCC,"Intron (Maml3-201/Maml3, intron 1 of 3)",3,51685907,51796536,110630,2,Maml3-201,94795,Maml3-201;Maml3-202,Maml3;Maml3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,10,32,433586,ENSMUSG00000061143,mapped to different genes,3,51701433,51701790,358,*,358,25,0.636871508,0.691279833,0.069832402,1.94E-15,CpGisland,TRUE,,
cg16762797,0.403512631,0.152966424,0.532297256,NA,NA,NA,Dmpk,Dmpk_Exon,7,19092214,19092263,19092214,19092215,50,+,CGGGGGTCCCCAGTCCCCGGGCCACGGATCCACCTTCCCATGTAAGACCC,Promoter (<=1kb),7,19092218,19093771,1554,1,Dmpk-205,0,Dmpk-201;Dmpk-218;Dmpk-202;Dmpk-203;Dmpk-219;Dmpk-216;Dmpk-208;Dmpk-209;Dmpk-211;Dmpk-213;Dmpk-217;Dmpk-206;Dmpk-215;Dmpk-207;Dmpk-212;Dmpk-214;Dmpk-205;Dmpk-210;Six5-201,Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Dmpk;Six5,0;0;0;0;0;7504;0;0;0;4945;4721;4603;4468;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,2,13400,ENSMUSG00000030409,mapped to different genes,,,,,,,,,,,,,TRUE,PromF1,
cg16787246,NA,NA,NA,NA,-0.184094452,-0.375223174,Usp24,Usp24_Exon,4,106402124,106402173,106402172,106402173,50,-,GTGCCGCCATCAGTCAACAGGACTTTCATCCAAAGTATGGAAAATGCACG,"Exon (Usp24-204/Usp24, exon 41 of 68)",4,106316213,106441317,125105,1,Usp24-204,85911,Usp24-204;Usp24-201,Usp24;Usp24,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,5,329908,ENSMUSG00000028514,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx7,
cg16820522,NA,NA,NA,-0.239875405,NA,NA,Gm2089,Gm2089_Intergenic_downstream,12,47317204,47317253,47317252,47317253,50,+,CAGCTCTCTGAAACAAAACAAAAACAAAATGTACCCAGGTTTCAGTTACG,Distal Intergenic,12,47199991,47200469,479,1,Gm2089-201,117213,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,2,100039190,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg16853731,NA,NA,NA,NA,-0.654715979,NA,Pou3f1,Pou3f1_threeUTR,4,124659641,124659690,124659689,124659690,50,-,TTTTTATTTATTCGTGGAGCCTCTCGGCTCCTGGGGTCCTTCTAACTCCG,3' UTR,4,124656807,124660655,3849,1,Pou3f1-201,2834,Pou3f1-201,Pou3f1,0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,6,85,18991,ENSMUSG00000090125,conserved gene and region,4,124659224,124659760,537,*,537,47,0.648044693,0.8390625,0.087523277,4.32E-33,CpGisland,TRUE,BivProm2,
cg16861303,NA,NA,NA,NA,NA,0.190760501,Nr2f2,Nr2f2_Exon,7,70357754,70357803,70357802,70357803,50,-,CCTTCCTACCTGAGGTGAACAGGACTATGGCCTTGAGGCAGCTGTACTCG,"Exon (Nr2f2-201/Nr2f2, exon 2 of 3)",7,70351944,70360593,8650,2,Nr2f2-201,2790,Nr2f2-201;Nr2f2-203;Nr2f2-202;Nr2f2-205;Nr2f2-204;Nr2f2-206,Nr2f2;Nr2f2;Nr2f2;Nr2f2;Nr2f2;Nr2f2,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,24,69,11819,ENSMUSG00000030551,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg16862391,NA,NA,0.009099317,NA,NA,NA,Stard8,Stard8_Exon,X,99073087,99073136,99073087,99073088,50,+,CGTTCTCCTGACTGGTACAACAAAGTCTTTGGACACCTGTGTGCCATGGA,"Exon (Stard8-201/Stard8, exon 14 of 14)",20,99042581,99074728,32148,1,Stard8-201,30506,Stard8-201;Stard8-202,Stard8;Stard8,0;4479,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,236920,ENSMUSG00000031216,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg16886347,NA,NA,NA,NA,0.028866938,NA,Ephb2,Ephb2_Intron,4,136773215,136773264,136773263,136773264,50,+,CACTTAATTAGAGCACTCTGCCTTTCTCCCCTCTCTCTAATTAACATGCG,"Intron (Ephb2-202/Ephb2, intron 2 of 15)",4,136647539,136835988,188450,2,Ephb2-202,62724,Ephb2-202;Ephb2-201;Ephb2-203;Ephb2-204,Ephb2;Ephb2;Ephb2;Ephb2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,8,15,13844,ENSMUSG00000028664,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg16907409,NA,NA,NA,NA,-0.371256564,-1.739738317,Thra,Thra_Exon,11,98756130,98756179,98756130,98756131,50,+,CGAAAAAGAAAGAACGGCCAATGTTCCCTGAAAACCAGCATGTCAGGTGA,"Exon (Thra-207/Thra, exon 3 of 4)",11,98741811,98757695,15885,1,Thra-207,14319,Thra-205;Thra-209;Thra-204;Thra-207;Thra-201;Thra-202;Thra-208;Thra-206;Thra-203,Thra;Thra;Thra;Thra;Thra;Thra;Thra;Thra;Thra,15492;0;15226;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,13,18,21833,ENSMUSG00000058756,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh5,
cg16949290,NA,NA,NA,NA,1.965752616,NA,Bcl11b,Bcl11b_Promoter,12,108004053,108004102,108004053,108004054,50,-,CGGTCTCTCTATGGCTGGGGCTGCCTCTGTACAATGGGATAAAATTCAAG,Promoter (<=1kb),12,107910403,108003602,93200,2,Bcl11b-201,-500,Bcl11b-201;Bcl11b-202;Bcl11b-203,Bcl11b;Bcl11b;Bcl11b,0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,8,39,58208,ENSMUSG00000048251,conserved gene but different region,12,108003757,108004054,298,*,298,35,0.728187919,0.89604811,0.117449664,1.44E-29,CpGisland,TRUE,PromF5,
cg16951263,NA,NA,-0.313353997,NA,NA,NA,Nr2f2,Nr2f2_Intergenic_downstream,7,70351729,70351778,70351777,70351778,50,+,AATGCAATAAACTTAAACCGAACTCAAGACTCTAAACAGATCCTCCTCCG,Downstream (<1kb),7,70353074,70355237,2164,2,Nr2f2-203,3459,Nr2f2-201;Nr2f2-203;Nr2f2-202;Nr2f2-205,Nr2f2;Nr2f2;Nr2f2;Nr2f2,0;0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,19,69,11819,ENSMUSG00000030551,mapped to different genes,,,,,,,,,,,,,TRUE,PromF5,
cg16957078,NA,NA,NA,NA,-0.323837452,-1.104502607,Ldb3,Ldb3_Exon,14,34561834,34561883,34561834,34561835,50,+,CGCAATTTGGCAAAACGTGGGCTGTTACGTTCCGTTTCAAACCTTTCCCT,"Exon (Ldb3-207/Ldb3, exon 10 of 10)",14,34526603,34588664,62062,2,Ldb3-201,26781,Ldb3-201;Ldb3-205;Ldb3-202;Ldb3-204;Ldb3-208;Ldb3-207;Ldb3-203,Ldb3;Ldb3;Ldb3;Ldb3;Ldb3;Ldb3;Ldb3,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,5,24131,ENSMUSG00000021798,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg16960148,NA,NA,-0.032629923,NA,NA,NA,Mbnl1,Mbnl1_fiveUTR,3,60528735,60528784,60528783,60528784,50,+,ACCTATCTCTTTTTTCTACAGGTTGGTACTAAGAAGTGCCTTTCCTGACG,5' UTR,3,60472830,60595764,122935,1,Mbnl1-222,55905,Mbnl1-222;Mbnl1-221;Mbnl1-216;Mbnl1-220;Mbnl1-211;Mbnl1-204;Mbnl1-201;Mbnl1-209;Mbnl1-202;Mbnl1-225;Mbnl1-217;Mbnl1-203;Mbnl1-218;Mbnl1-208;Mbnl1-219;Mbnl1-214;Mbnl1-207;Mbnl1-205;Mbnl1-212,Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,36,56758,ENSMUSG00000027763,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg16976603,-0.750854612,NA,NA,NA,NA,NA,Arrdc3,Arrdc3_Exon,13,80884866,80884915,80884866,80884867,50,+,CGCGTCAGGTGGTGGCGATGACTTAATTCCTAGCCCAAGAAGAATATAAT,"Exon (1700023H06Rik-201/1700023H06Rik-201, exon 2 of 2)",13,80883384,80889643,6260,1,Arrdc3-202,1482,Arrdc3-202;Arrdc3-203;Arrdc3-201;Arrdc3-205,Arrdc3;Arrdc3;Arrdc3;Arrdc3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,8,105171,ENSMUSG00000074794,mapped to different genes,,,,,,,,,,,,,TRUE,TSS1,
cg16986847,-0.19792653,NA,NA,NA,NA,NA,Tcf7,Tcf7_Intron,11,52255104,52255153,52255104,52255105,50,-,CGGACCACACCAATCCGTCTGCTGGTTGAGGCCAAAGCGAGCACGGCATT,"Intron (Tcf7-201/Tcf7, intron 9 of 9)",11,52252371,52282571,30201,2,Tcf7-201,27418,Tcf7-201;Tcf7-202;Tcf7-203,Tcf7;Tcf7;Tcf7,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,8,21414,ENSMUSG00000000782,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh4,
cg17036647,NA,NA,NA,NA,-0.036212126,NA,Sim1,Sim1_Intron,10,50901922,50901971,50901970,50901971,50,+,TTTCTTGTTTTATAAATCGAAATCTCATTTTCAGGAAATTACAAAACCCG,"Intron (Sim1-201/Sim1, intron 1 of 10)",10,50895651,50989152,93502,1,Sim1-201,6271,Sim1-202;Sim1-201,Sim1;Sim1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,8,20464,ENSMUSG00000019913,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg17063148,NA,NA,NA,NA,-1.011935473,NA,Prrxl1,Prrxl1_Promoter,14,32599310,32599359,32599310,32599311,50,+,CGCTGTAGACAGCGCTGGAAATAATCAGATTAAGGCCAATTATGCGTGAG,Promoter (<=1kb),14,32599407,32649204,49798,1,Prrxl1-203,-48,Prrxl1-203;Prrxl1-204;Prrxl1-202;Prrxl1-201;Prrxl1-205,Prrxl1;Prrxl1;Prrxl1;Prrxl1;Prrxl1,0;0;0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,14,23,107751,ENSMUSG00000041730,conserved gene and region,14,32599310,32599392,83,*,83,9,0.530120482,1.667410714,0.108433735,1.80E-07,CpGisland,TRUE,ReprPC1,
cg17095500,NA,0.280600152,NA,NA,NA,NA,Nrxn3,Nrxn3_threeUTR,12,90331788,90331837,90331836,90331837,50,+,ATAAGAGTCTTTCCACTTCAATCTTCGAAGGTGGCTACAAAGCACATGCG,3' UTR,12,88722986,90332878,1609893,1,Nrxn3-213,1608802,Nrxn3-213;Nrxn3-208;Nrxn3-205;Nrxn3-201;Nrxn3-210;Nrxn3-214;Nrxn3-203;Nrxn3-202,Nrxn3;Nrxn3;Nrxn3;Nrxn3;Nrxn3;Nrxn3;Nrxn3;Nrxn3,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,14,39,18191,ENSMUSG00000066392,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk8,
cg17177455,NA,NA,NA,NA,-0.709604423,NA,Hoxd11,Hoxd11_Exon,2,74679625,74679674,74679673,74679674,50,+,CAAAGTTAAGGTCAAGTTAGTGTCTTATCTTGGGTGACTCAAAATCACCG,Promoter (<=1kb),2,74679557,74687016,7460,1,Hoxd11-201,68,Hoxd11-201;Hoxd11-202;Hoxd12-201,Hoxd11;Hoxd11;Hoxd12,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,14,15431,ENSMUSG00000042499,conserved gene and region,2,74679673,74679866,194,*,194,20,0.587628866,1.2125,0.103092784,7.72E-16,CpGisland,TRUE,BivProm2,
cg17179896,NA,NA,0.099054052,NA,NA,NA,Srrm2,Srrm2_fiveUTR,17,23808098,23808147,23808098,23808099,50,-,CGACCTTTCGACTCATGTTGCTGGAGAAGGATGTGAACCCTGGGGGCAAG,Promoter (<=1kb),17,23808098,23808708,611,1,Srrm2-208,0,Srrm2-206;Srrm2-210;Srrm2-201;Srrm2-212;Srrm2-211;Srrm2-208;Srrm2-203;Srrm2-207,Srrm2;Srrm2;Srrm2;Srrm2;Srrm2;Srrm2;Srrm2;Srrm2,0;0;0;0;0;0;0;-3753,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,13,75956,ENSMUSG00000039218,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg17185663,-0.246360106,NA,NA,NA,NA,NA,Rnf44,Rnf44_Exon,13,54687213,54687262,54687261,54687262,50,+,CCGGACCATGTGCTCGGCGTGAGACAAAAGCAACAACAAAGGAAGTGGCG,Promoter (<=1kb),13,54684030,54687253,3224,2,Rnf44-203,0,Rnf44-218;Rnf44-204;Rnf44-201;Rnf44-211;Rnf44-217;Rnf44-208;Rnf44-213;Rnf44-206;Rnf44-209;Rnf44-207;Rnf44-205;Rnf44-202;Rnf44-210;Rnf44-214;Rnf44-215;Rnf44-203;Rnf44-212;Rnf44-216,Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44;Rnf44,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,3,105239,ENSMUSG00000034928,conserved gene but different region,13,54687075,54688213,1139,*,1139,123,0.675153644,0.948793834,0.107989464,1.50E-97,CpGisland,TRUE,,
cg17224602,NA,NA,NA,NA,-0.965731546,NA,Pou3f3,Pou3f3_Promoter,1,42695584,42695633,42695584,42695585,50,-,CGCTCTGCCTAAATTAAAAAGCAACCAATCGGAACGGCCGGAAGGGGGGC,Promoter (<=1kb),1,42694925,42703176,8252,1,Pou3f3-202,659,Pou3f3-202;Pou3f3-201,Pou3f3;Pou3f3,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,37,18993,ENSMUSG00000045515,conserved gene and region,1,42695391,42695839,449,*,449,33,0.634743875,0.816633598,0.073496659,6.76E-21,CpGisland,TRUE,BivProm3,
cg17228011,NA,NA,NA,-0.38742924,NA,NA,Ppp2r5e,Ppp2r5e_Exon,12,75593270,75593319,75593270,75593271,50,+,CGAGAAAATCCGTCTACTTTATCCACTGATGGAGGAGTAGTTGGTGCTGA,"Exon (Ppp2r5e-201/Ppp2r5e, exon 2 of 14)",12,75450881,75596200,145320,2,Ppp2r5e-201,2881,Ppp2r5e-201;Ppp2r5e-205;Ppp2r5e-202;Ppp2r5e-204,Ppp2r5e;Ppp2r5e;Ppp2r5e;Ppp2r5e,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,7,26932,ENSMUSG00000021051,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg17295628,0.32070624,NA,0.407344517,NA,NA,NA,Casz1,Casz1_Intron,4,148893534,148893583,148893582,148893583,50,+,TTGTCACCCTAATTGATTGCATTAACCTTTCAGCGTATTGGATTTCCCCG,"Intron (Casz1-201/Casz1, intron 3 of 15)",4,148804429,148945129,140701,1,Casz1-201,89105,Casz1-201;Casz1-202;Casz1-205,Casz1;Casz1;Casz1,0;0;4153,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC7,
cg17314086,NA,NA,NA,0.03999655,NA,NA,Eri3,Eri3_Intron,4,117645112,117645161,117645160,117645161,50,+,ATTATACACGATTCCATTTCGCGGGCCCAGCAATGTAATTTCACAGGGCG,"Intron (Eri3-201/Eri3, intron 7 of 8)",4,117550365,117674297,123933,1,Eri3-201,94747,Eri3-201;Eri3-206;Eri3-203,Eri3;Eri3;Eri3,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,82,97,140546,ENSMUSG00000033423,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg17325863,0.215403806,NA,NA,NA,NA,NA,Tcf4,Tcf4_Intron,18,69346902,69346951,69346950,69346951,50,+,TTCATTTCTCGCTCTACCTCCTGTTGCATAAAATGATGCGCTGAAGAGCG,"Intron (Tcf4-259/Tcf4, intron 1 of 6)",18,69343356,69564082,220727,1,Tcf4-259,3546,Tcf4-259;Tcf4-201;Tcf4-207;Tcf4-210;Tcf4-240;Tcf4-254;Tcf4-246;Tcf4-206;Tcf4-202;Tcf4-257;Tcf4-232;Tcf4-215;Tcf4-248;Tcf4-231;Tcf4-205;Tcf4-253;Tcf4-244;Tcf4-233;Tcf4-238;Tcf4-245;Tcf4-249;Tcf4-219;Tcf4-235;Tcf4-227,Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,42,66,21413,ENSMUSG00000053477,conserved gene but different region,,,,,,,,,,,,,TRUE,TSS1,
cg17341782,0.234338351,NA,0.073812222,0.044245664,NA,NA,Tmem33,Tmem33_Intergenic_upstream,5,67228751,67228800,67228751,67228752,50,+,CGCCACTCGATTCCGGGATAATTTTTAATATATATGCAATAAATGTTCAC,Distal Intergenic,5,67260565,67291461,30897,1,Tmem33-201,-31765,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,22,22,67878,ENSMUSG00000037720,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg17355105,NA,NA,NA,NA,0.811148628,0.367122573,Gm18839,Gm18839_Intergenic_downstream,6,64864746,64864795,64864746,64864747,50,-,CGTGGGATGGCAAAGTCATCTTCATTAGACGGAATTTAATAGTGAATCAA,Distal Intergenic,6,64878459,64879128,670,2,Gm18839-201,14382,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,1,100417806,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies4,
cg17389888,NA,NA,NA,NA,-0.387658878,NA,Lhfpl3,Lhfpl3_Exon,5,22746288,22746337,22746288,22746289,50,+,CGGCGTGCTGTGGGCCATCTTCACCATCTGCTTTGCCATCGTCAACGTGG,Promoter (<=1kb),5,22746059,23275597,529539,1,Lhfpl3-202,229,Lhfpl3-202,Lhfpl3,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,11,269629,ENSMUSG00000106379,conserved gene and region,5,22746271,22746758,488,*,488,33,0.610655738,0.733834586,0.067622951,9.76E-20,CpGisland,TRUE,,
cg17466220,0.414961388,NA,NA,NA,1.907466969,NA,Nkx2-1,Nkx2-1_fiveUTR,12,56536677,56536726,56536677,56536678,50,+,CGCTTTGTGGCCACGCTGGATATTAGTAGATGAGGATCATTCTGCTTCAA,Promoter (<=1kb),12,56531958,56536908,4951,2,Nkx2-1-201,182,Nkx2-1-202;Nkx2-1-201,Nkx2-1;Nkx2-1,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,6,29,21869,ENSMUSG00000001496,mapped to different genes,12,56536346,56536691,346,*,346,28,0.61849711,0.84618744,0.080924855,5.59E-19,CpGisland,TRUE,BivProm2,
cg17475635,-0.030512254,NA,NA,NA,NA,NA,Rbfox1,Rbfox1_Intergenic_downstream,16,7520747,7520796,7520747,7520748,50,-,CGTAACTCACCCAGCATGTAAAACAAATAACTAGGCTGACATGTCTGAAG,Distal Intergenic,16,7352970,7409969,57000,1,Rbfox1-206,167826,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,3,35,268859,ENSMUSG00000008658,conserved gene and region,,,,,,,,,,,,,TRUE,Quies2,
cg17514125,-0.154352684,NA,NA,NA,NA,NA,Lin28a,Lin28a_fiveUTR,4,134018103,134018152,134018103,134018104,50,-,CGGTCATGGACAGGAAGCCGAACCCCATGCGCACGTTGAACCACTTACAG,Promoter (<=1kb),4,134003330,134018841,15512,2,Lin28a-201,689,Lin28a-201;Lin28a-204,Lin28a;Lin28a,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,5,83557,ENSMUSG00000050966,conserved gene but different region,4,134018067,134018242,176,*,176,24,0.721590909,1.052841476,0.136363636,3.84E-22,CpGisland,TRUE,BivProm2,
cg17527148,NA,NA,NA,NA,-0.081795711,NA,Ranbp17,Ranbp17_threeUTR,11,33297381,33297430,33297429,33297430,50,+,AGTGCAAAGGCAATCCCTCGAAGATCTCTTGCCAGCCCGATCAACATACG,3' UTR,11,33211795,33513746,301952,2,Ranbp17-202,216316,Ranbp17-202;Ranbp17-206;Ranbp17-203,Ranbp17;Ranbp17;Ranbp17,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,31,66011,ENSMUSG00000040594,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg17543458,NA,-0.41435688,NA,NA,NA,NA,Robo1,Robo1_Intron,16,73105741,73105790,73105789,73105790,50,+,GCATGACAAATTATGAAACACATACTGTGAAAATTATGGACTCTGTCACG,"Intron (4930500H12Rik-208/4930500H12Rik-208, intron 2 of 5)",16,73006421,73008746,2326,1,Robo1-208,99320,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,8,19876,ENSMUSG00000022883,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhWk3,
cg17553901,-0.049782707,NA,NA,NA,NA,NA,Usp5,Usp5_Exon,6,124818520,124818569,124818520,124818521,50,+,CGTTGCCATAGAAACCAAGGCTACCTTTGGGCTCATCCGGAGTGACCAGG,"Exon (Usp5-201/Usp5, exon 15 of 20)",6,124815019,124829484,14466,2,Usp5-201,10915,Tpi1-205;Tpi1-204;Tpi1-207;Tpi1-206;Usp5-201;Usp5-202;Usp5-204;Usp5-209;Usp5-203;Usp5-206;Usp5-205;Usp5-207,Tpi1;Tpi1;Tpi1;Tpi1;Usp5;Usp5;Usp5;Usp5;Usp5;Usp5;Usp5;Usp5,-4224;-4362;-4224;-4366;0;0;0;-627;4900;10839;5054;5631,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,5,22225,ENSMUSG00000038429,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg17563080,NA,NA,0.014485688,NA,NA,NA,Pola1,Pola1_Exon,X,93561883,93561932,93561931,93561932,50,-,TCTGGATTTAAGTCTTGCTGTTTCATTAGCTGTTTGACTTGTTTTCTCCG,"Exon (Pola1-201/Pola1, exon 25 of 37)",20,93304767,93632155,327389,2,Pola1-201,70223,Pola1-201,Pola1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,62,18968,ENSMUSG00000006678,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx6,
cg17589788,-0.039975587,NA,-0.320232686,NA,NA,NA,Mef2d,Mef2d_Exon,3,88158243,88158292,88158291,88158292,50,+,AATGTGAGAGCCCTGAGGTGGACGAGGTGTTTGCCCTGACCCCCCAGACG,"Exon (Mef2d-202/Mef2d, exon 4 of 11)",3,88142372,88172086,29715,1,Mef2d-201,15871,Mef2d-201;Mef2d-204;Mef2d-202;Mef2d-203;Mef2d-206;Mef2d-205,Mef2d;Mef2d;Mef2d;Mef2d;Mef2d;Mef2d,0;0;0;0;15669;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,10,17261,ENSMUSG00000001419,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg17596554,NA,NA,NA,NA,-0.424693649,NA,Nog,Nog_Promoter,11,89302541,89302590,89302541,89302542,50,-,CGTTGGCACCGGTTTGTCTGTCTCGCAGGGTCCAAGCCTTTAAATTTCCT,Promoter (<=1kb),11,89300638,89302332,1695,2,Nog-201,-258,Nog-201,Nog,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,3,36,18121,ENSMUSG00000048616,conserved gene but different region,11,89301879,89302565,687,*,687,88,0.736535662,0.94472833,0.128093159,2.20E-77,CpGisland,TRUE,TSS1,
cg17611384,NA,NA,NA,NA,NA,0.231570662,Hoxb3,Hoxb3_Intron,11,96340755,96340804,96340803,96340804,50,+,GTTACGGAGAGTAGGGCGTACCAGTCTTATAGGGCAACCACACTGTGGCG,"Intron (Hoxb3-202/Hoxb3, intron 1 of 3)",11,96323326,96347930,24605,1,Hoxb3-202,17429,Hoxb3-202;Hoxb3-203;Hoxb3-204;Hoxb3-201,Hoxb3;Hoxb3;Hoxb3;Hoxb3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,19,15410,ENSMUSG00000048763,conserved gene and region,11,96340759,96341024,266,*,266,25,0.695488722,0.779053421,0.093984962,1.19E-18,CpGisland,TRUE,PromF5,
cg17651973,NA,0.00096338,NA,0.092861566,NA,NA,Tank,Tank_Intergenic_downstream,2,61656476,61656525,61656524,61656525,50,+,AGCATTTGAGGCAGCAGCGTTCGCCTGCTGAACGGTGACAGATTGGCGCG,Distal Intergenic,2,61643831,61649977,6147,1,Tank-211,12645,Tank-205;Tank-201;Tank-206;Tank-203;Tank-204;Tank-202;Tank-208,Tank;Tank;Tank;Tank;Tank;Tank;Tank,0;0;0;0;0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,16,17,21353,ENSMUSG00000064289,mapped to different genes,2,61656429,61656917,489,*,489,60,0.707566462,0.985887097,0.122699387,1.21E-51,CpGisland,TRUE,PromF5,
cg17695612,NA,-0.00022915,NA,-0.166813365,NA,NA,Ddhd1,Ddhd1_threeUTR,14,45610723,45610772,45610723,45610724,50,-,CGATTCAGCTCTTGCTGAAGGCCTTTAACTAGCTGTTTGAAATAAGAAAA,3' UTR,14,45588467,45658142,69676,2,Ddhd1-203,47370,Ddhd1-203;Ddhd1-202;Ddhd1-201;Ddhd1-209;Ddhd1-205;Ddhd1-208;Ddhd1-206;Ddhd1-204,Ddhd1;Ddhd1;Ddhd1;Ddhd1;Ddhd1;Ddhd1;Ddhd1;Ddhd1,0;0;0;0;0;0;0;-1381,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,3,114874,ENSMUSG00000037697,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx8,
cg17702804,NA,NA,NA,NA,0.640727194,NA,Rnf220,Rnf220_Intron,4,117411804,117411853,117411852,117411853,50,+,ACTGTTCCTTTTGAAGGCAGCCTGGTGCTACCCGCATGTACCTTAACCCG,"Intron (Rnf220-201/Rnf220, intron 2 of 14)",4,117271463,117497052,225590,2,Rnf220-201,85199,Rnf220-201;Rnf220-207,Rnf220;Rnf220,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,132,152,66743,ENSMUSG00000028677,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm3,
cg17708456,0.165669092,NA,NA,NA,NA,NA,Mecom,Mecom_fiveUTR,3,30509774,30509823,30509822,30509823,50,-,TTTGGAGCGATTTATCACTTTGATTTGGAGATCTTGTCAGATGGCAATCG,Promoter (<=1kb),3,29965456,30509822,544367,2,Mecom-207,0,Mecom-212;Mecom-213;Mecom-207;Mecom-208;Mecom-211;Mecom-209,Mecom;Mecom;Mecom;Mecom;Mecom;Mecom,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,13,80,14013,ENSMUSG00000027684,conserved gene and region,3,30509822,30509917,96,*,96,11,0.739583333,1.005714286,0.114583333,2.34E-09,CpGisland,TRUE,BivProm1,
cg17711361,NA,NA,NA,0.491733927,NA,NA,C1ql4,C1ql4_Promoter,15,99089192,99089241,99089192,99089193,50,+,CGCTGCAGAGAGACACCCAGGTCCGTGTTTGGACTCCAATGTGACATATC,Promoter (1-2kb),15,99084086,99087817,3732,2,C1ql4-201,-1375,C1ql4-201;Dnajc22-202,C1ql4;Dnajc22,-1375;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,2,2,239659,ENSMUSG00000001076,conserved gene and region,15,99089170,99089287,118,*,118,10,0.584745763,1.040564374,0.084745763,3.09E-07,CpGisland,TRUE,ReprPC1,
cg17755632,NA,NA,NA,NA,-0.000832978,-0.121975529,Nfia,Nfia_Intron,4,97990543,97990592,97990543,97990544,50,-,CGGAAATTAGGTCAGCCTTCTGGAACATTTATCATGTATACCTGTCACCA,"Intron (Nfia-208/Nfia, intron 3 of 3)",4,97772734,98000466,227733,1,Nfia-208,217809,Nfia-208;Nfia-202;Nfia-203;Nfia-205;Nfia-201;Nfia-204;Nfia-207;Nfia-206,Nfia;Nfia;Nfia;Nfia;Nfia;Nfia;Nfia;Nfia,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,24,44,18027,ENSMUSG00000028565,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg17783509,NA,NA,NA,NA,-0.504197756,NA,Phox2b,Phox2b_fiveUTR,5,67099267,67099316,67099315,67099316,50,+,TATCATTGATTCCTGCATCTCTAATTAGAATTTAATACCACACCATTACG,Promoter (<=1kb),5,67094399,67099301,4903,2,Phox2b-201,0,Phox2b-201;Phox2b-202,Phox2b;Phox2b,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,6,28,18935,ENSMUSG00000012520,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC1,
cg17784271,NA,-0.325049018,NA,NA,NA,NA,Kit,Kit_Intron,5,75591844,75591893,75591844,75591845,50,+,CGATTTCTAGGTGTAAAAGCCAGGCAGATTTGCTCACTCAAGAAAATCTG,"Intron (Kit-204/Kit, intron 1 of 20)",5,75574916,75656722,81807,1,Kit-204,16928,Kit-204;Kit-201,Kit;Kit,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,16590,ENSMUSG00000005672,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg17797814,NA,0.471452697,NA,NA,NA,NA,Hoxc5,Hoxc5_Exon,15,103009686,103009735,103009734,103009735,50,-,TTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCTATGGAGCGGCCG,"Exon (Hoxc6-202/Hoxc6, exon 2 of 3)",15,102967443,103015676,48234,1,Hoxc5-202,42243,Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,mapped to different genes,15,103009647,103009812,166,*,166,14,0.602409639,0.948184415,0.084337349,5.77E-10,CpGisland,TRUE,BivProm1,
cg17824274,NA,NA,NA,NA,-0.153576287,NA,Galnt3,Galnt3_Exon,2,66093562,66093611,66093610,66093611,50,+,CTCCTATAAAATATTTCCTTGTATTCATCCATCCAGACTTCTGCAAGGCG,"Exon (Galnt3-201/Galnt3, exon 7 of 11)",2,66082766,66124994,42229,2,Galnt3-201,31383,Galnt3-201;Galnt3-204;Galnt3-202;Galnt3-203,Galnt3;Galnt3;Galnt3;Galnt3,0;0;0;8872,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,14425,ENSMUSG00000026994,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx6,
cg17829569,NA,NA,0.248480212,NA,NA,NA,Gm14515,Gm14515_Intergenic_upstream,X,11490190,11490239,11490190,11490191,50,-,CGTGTGTATTTGTGTAGTTGGAGTGAATAAATGTTTAAATCAGTGTGTCA,Distal Intergenic,20,11601354,11601569,216,1,Gm14515-201,-111164,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,21,28,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk3,
cg17866805,NA,NA,NA,NA,0.231419429,NA,Hoxa13,Hoxa13_Exon,6,52259888,52259937,52259936,52259937,50,+,GGGGAGGCTGCGCCTGCTCTTTGGGGCAGTACATTTGGCCGTTCCAGCCG,Promoter (<=1kb),6,52257694,52260803,3110,2,Hoxa13-203,866,Hoxa13-203;Hoxa13-201;Hoxa13-202;Hoxa13-204;Hoxa13-205;Hoxa13-206,Hoxa13;Hoxa13;Hoxa13;Hoxa13;Hoxa13;Hoxa13,0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,12,15398,ENSMUSG00000038203,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg17946107,NA,NA,0.361096508,NA,NA,NA,Ptch1,Ptch1_Intron,13,63571238,63571287,63571286,63571287,50,+,GTAAAACAATTCCAGCTTATTGTGTGTCTTTCTTTCATACTGCTAATCCG,"Intron (Ptch1-204/Ptch1, intron 1 of 23)",13,63508329,63573460,65132,2,Ptch1-204,2173,Ptch1-204;Ptch1-205,Ptch1;Ptch1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,36,19206,ENSMUSG00000021466,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg18010237,-0.04410771,NA,NA,NA,NA,NA,Zfp608,Zfp608_Intron,18,54990402,54990451,54990402,54990403,50,-,CGGGATAAATTAGTGAAAGGGAAGAAAGAATAAGAAGAAAGGACTGAAAA,"Intron (Gm4221-203/Gm4221-203, intron 1 of 1)",18,54888723,54992555,103833,2,Zfp608-203,2104,Zfp608-201;Zfp608-203,Zfp608;Zfp608,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,16,32,269023,ENSMUSG00000052713,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg18030834,NA,NA,NA,NA,0.100518141,NA,Fgfr2,Fgfr2_Intron,7,131542583,131542632,131542631,131542632,50,-,ACTCCCCGCATTTAACTTGGATGACATTTTGATTTCATCATTAGCATCCG,"Intron (Fgfr2-217/Fgfr2, intron 2 of 6)",7,130162451,133123350,2960900,2,Fgfr2-217,1580718,Fgfr2-217;Hmx3-201,Fgfr2;Hmx3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,58,79,14183,ENSMUSG00000030849,mapped to different genes,7,131542631,131543412,782,*,782,92,0.739130435,0.916717635,0.117647059,5.66E-77,CpGisland,TRUE,BivProm1,
cg18033250,NA,-0.152345395,NA,NA,NA,NA,Gm11235,Gm11235_Intergenic_upstream,4,72385056,72385105,72385104,72385105,50,+,TGTTTACTTCCTCCAGAAACAAGAGCATCATCAGCACGCTCAGTGCATCG,Distal Intergenic,4,72542666,72542998,333,1,Gm11235-201,-157561,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,6,8,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg18131423,NA,NA,NA,0.265952798,NA,NA,Atxn2l,Atxn2l_Exon,7,126492776,126492825,126492824,126492825,50,+,CTCCTGGAAATCCAGGCGCCTGGCCAGGCTGCTCACCTTGGGGGTGTCCG,"Exon (Atxn2l-201/Atxn2l, exon 22 of 23)",7,126491708,126503437,11730,2,Atxn2l-201,10612,Atxn2l-201;Atxn2l-203;Atxn2l-206;Atxn2l-205;Atxn2l-202;Tufm-201;Tufm-202;Tufm-203;Tufm-204;Tufm-205;Tufm-206,Atxn2l;Atxn2l;Atxn2l;Atxn2l;Atxn2l;Tufm;Tufm;Tufm;Tufm;Tufm;Tufm,0;0;0;0;0;5415;5398;5147;4162;4090;3405,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,13,233871,ENSMUSG00000032637,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg18135595,NA,NA,NA,NA,0.11828112,NA,Uncx,Uncx_Promoter,5,139540003,139540052,139540051,139540052,50,-,AAAATTAACTTGCGTGAAGTTAATTGAGTAATTAAAACCCTCAACTGCCG,Promoter (3-4kb),5,139543494,139548179,4686,1,Uncx-201,-3491,Uncx-201;Uncx-202,Uncx;Uncx,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,22,88,22255,ENSMUSG00000029546,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg18160481,NA,NA,NA,0.047010235,NA,NA,Son,Son_Intron,16,91662385,91662434,91662385,91662386,50,+,CGAAATACAGATGTGGCAGCGGCAGAAGCTCTGTTTAGCAGGCCATTATC,"Intron (Son-203/Son, intron 4 of 11)",16,91647506,91679207,31702,1,Son-203,14879,Son-203;Son-204;Son-202;Son-208;Son-201;Son-205;Son-212;Son-207,Son;Son;Son;Son;Son;Son;Son;Son,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,31,20658,ENSMUSG00000022961,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg18194663,NA,-1.311719333,NA,NA,NA,NA,Sin3a,Sin3a_Intron,9,57075743,57075792,57075791,57075792,50,+,TCTAGTGTAAACATTCCACAAAAGGACTGCTAAGGTTCAGCCTCCTCGCG,"Intron (Sin3a-209/Sin3a, intron 1 of 2)",9,57072040,57089496,17457,1,Sin3a-209,3703,Sin3a-209;Sin3a-204;Sin3a-208;Sin3a-206;Sin3a-202,Sin3a;Sin3a;Sin3a;Sin3a;Sin3a,0;0;0;0;-836,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,4,20466,ENSMUSG00000042557,conserved gene and region,9,57075789,57075916,128,*,128,12,0.671875,0.842105263,0.09375,3.94E-09,CpGisland,TRUE,PromF3,
cg18257298,NA,NA,NA,NA,-1.540537118,NA,Fezf2,Fezf2_fiveUTR,14,12345694,12345743,12345742,12345743,50,-,ACATTCAGCTGACATCACATGAAGTCACTTGAAGTGGAATGACATGGGCG,Promoter (<=1kb),14,12342094,12345844,3751,2,Fezf2-203,101,Fezf2-203;Fezf2-201;Fezf2-202,Fezf2;Fezf2;Fezf2,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,13,45,54713,ENSMUSG00000021743,conserved gene and region,14,12345742,12345947,206,*,206,23,0.67961165,1.001479603,0.111650485,5.22E-19,CpGisland,TRUE,BivProm2,
cg18281552,-0.175321105,-0.511459489,-0.470734385,NA,NA,NA,Cxxc5,Cxxc5_Intron,18,35848074,35848123,35848122,35848123,50,+,CAAAAATGAAACCAATTAAGGACAAACTTTGAAAGCCTCTAATTGCTGCG,"Intron (Gm50371-201/Gm50371-201, intron 4 of 4)",18,35829397,35859002,29606,1,Cxxc5-202,18677,Cxxc5-202;Cxxc5-201;Cxxc5-206;Cxxc5-203,Cxxc5;Cxxc5;Cxxc5;Cxxc5,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,49,67393,ENSMUSG00000046668,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg18284930,NA,NA,NA,NA,-0.589185576,-0.757079122,Fezf2,Fezf2_fiveUTR,14,12345673,12345722,12345673,12345674,50,-,CGCGTGAGATCACTGTCTTTTACATTCAGCTGACATCACATGAAGTCACT,Promoter (<=1kb),14,12342094,12345844,3751,2,Fezf2-203,122,Fezf2-203;Fezf2-201;Fezf2-202,Fezf2;Fezf2;Fezf2,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,13,45,54713,ENSMUSG00000021743,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg18288070,-0.019541358,NA,NA,NA,NA,NA,Gm48316,Gm48316_Intergenic_upstream,13,94710220,94710269,94710268,94710269,50,-,AACTCTCTTTTATTTCCAACAGCCCTAATCAGCCGCTCTCATTACAAACG,Distal Intergenic,13,94752270,94752593,324,1,Gm48316-201,-42050,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,36,42,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg18334881,NA,-0.220888016,NA,NA,NA,NA,Lbx1,Lbx1_Intergenic_downstream,19,45229374,45229423,45229422,45229423,50,+,TGGGATTAATTACCACGTTCTGGTCCCTCAGACTGGAGTATTACTTATCG,Distal Intergenic,19,45232684,45235812,3129,2,Lbx1-201,6389,Lbx1-201,Lbx1,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,30,50,16814,ENSMUSG00000025216,mapped to different genes,19,45229389,45229613,225,*,225,22,0.635555556,0.968688845,0.097777778,7.42E-17,CpGisland,TRUE,BivProm2,
cg18336804,NA,NA,1.329913241,NA,NA,NA,Gm42715,Gm42715_Exon,7,127534572,127534621,127534572,127534573,50,+,CGAGTTAAGGTGGATGTTGAGAAGCAGATGCCCAAAAAGTACGAGCATGT,"Exon (Srcap-204/Srcap, exon 17 of 21)",7,127519584,127567054,47471,1,Gm42715-201,14988,Gm42715-201;Srcap-204;Srcap-201;Srcap-208;Srcap-207;Srcap-206;Srcap-214;Srcap-213,Gm42715;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh4,
cg18394148,NA,NA,NA,NA,-3.162654799,NA,Celf6,Celf6_Exon,9,59578588,59578637,59578588,59578589,50,-,CGCATCTACGAGCTGACGGTGCTGAAGGACCGGCTCACCGGCCTCCACAA,Promoter (<=1kb),9,59577917,59607292,29376,1,Celf6-207,671,Celf6-207;Celf6-203;Celf6-205;Celf6-201,Celf6;Celf6;Celf6;Celf6,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,8,76183,ENSMUSG00000032297,conserved gene but different region,9,59577836,59578646,811,*,811,79,0.700369914,0.796878109,0.097410604,4.77E-59,CpGisland,TRUE,TSS2,
cg18404903,0.025162269,NA,NA,NA,NA,NA,Galnt17,Galnt17_Exon,5,131081560,131081609,131081560,131081561,50,+,CGGCGTCCCACCAGTCTTTTGGGGGGCTGATGTACATGCACCACAGCTCC,"Exon (Galnt17-201/Galnt17, exon 5 of 11)",5,130872082,131308497,436416,2,Galnt17-201,226888,Galnt17-201;Galnt17-202;Galnt17-203,Galnt17;Galnt17;Galnt17,0;0;225306,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,212996,ENSMUSG00000034040,conserved gene and region,,,,,,,,,,,,,TRUE,Acet1,
cg18409102,NA,NA,NA,-0.209273415,NA,NA,Zbtb16,Zbtb16_Intron,9,48733957,48734006,48734005,48734006,50,+,TCTGCTCAGCTGGTTTTAAATGAAGTTATTATGAGTCATTAAAACACCCG,"Intron (Zbtb16-201/Zbtb16, intron 3 of 6)",9,48654297,48835945,181649,2,Zbtb16-201,101939,Zbtb16-201;Zbtb16-202,Zbtb16;Zbtb16,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,37,235320,ENSMUSG00000066687,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg18452899,NA,NA,NA,NA,NA,-0.028029032,Pax2,Pax2_Intron,19,44820311,44820360,44820311,44820312,50,+,CGGCTGATCCATCTGGATCCAAGTGTGAGAAAAGTTCATTTCAGACCCAG,"Intron (Pax2-203/Pax2, intron 7 of 9)",19,44756045,44837851,81807,1,Pax2-203,64266,Pax2-203;Pax2-201;Pax2-202,Pax2;Pax2;Pax2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,166,18504,ENSMUSG00000004231,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC3,
cg18478130,NA,NA,-0.22295431,NA,NA,NA,Rbm15,Rbm15_Intergenic_downstream,3,107324886,107324935,107324886,107324887,50,-,CGAGGTTAAAATTCAAAACAAGCCCAACAAGCCTGCATTTCAAGGTGGTC,Distal Intergenic,3,107327135,107333101,5967,2,Rbm15-202,8215,Rbm15-201;Rbm15-202,Rbm15;Rbm15,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,5,9,229700,ENSMUSG00000048109,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx4,
cg18486261,NA,NA,NA,0.209650161,NA,NA,Ccnl1,Ccnl1_threeUTR,3,65946880,65946929,65946928,65946929,50,+,CTGTGACTGCGGGACCTGCTTCTTGATCTCGAGCTGTATGTTCCAGATCG,3' UTR,3,65946151,65958162,12012,2,Ccnl1-203,11233,Ccnl1-203;Ccnl1-214;Ccnl1-202;Ccnl1-201;Ccnl1-205;Ccnl1-206;Ccnl1-212;Ccnl1-207;Ccnl1-213;Ccnl1-211;Ccnl1-208;Ccnl1-204;Ccnl1-209;Ccnl1-210,Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1;Ccnl1,0;0;0;0;0;0;0;0;0;0;0;4939;6064;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,7,7,56706,ENSMUSG00000027829,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg18538769,NA,0.093000099,NA,NA,NA,NA,C2cd2l,C2cd2l_Exon,9,44317005,44317054,44317053,44317054,50,-,TTGGTGGCAGTGTCAGAGTGACGTGGTAGGTCTCCATGGAGACGGCAGCG,"Exon (C2cd2l-201/C2cd2l, exon 3 of 14)",9,44309237,44320285,11049,2,C2cd2l-201,3231,C2cd2l-201;C2cd2l-208;C2cd2l-202;C2cd2l-204;C2cd2l-203;C2cd2l-206;C2cd2l-209;C2cd2l-207;C2cd2l-205,C2cd2l;C2cd2l;C2cd2l;C2cd2l;C2cd2l;C2cd2l;C2cd2l;C2cd2l;C2cd2l,0;0;-2056;-2550;-3166;0;-1718;-851;-132,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,71764,ENSMUSG00000032120,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg18539981,0.368384821,NA,NA,NA,NA,NA,Cacna1e,Cacna1e_Exon,1,154561732,154561781,154561732,154561733,50,-,CGGAAAGCACTCCCAGGACTAGGTTGAGAACAAAGAAGGATCCAATGATG,"Exon (Cacna1e-203/Cacna1e, exon 7 of 47)",1,154390731,154726356,335626,2,Cacna1e-203,164575,Cacna1e-203;Cacna1e-201;Cacna1e-207;Cacna1e-206;Cacna1e-209,Cacna1e;Cacna1e;Cacna1e;Cacna1e;Cacna1e,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,10,19,12290,ENSMUSG00000004110,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA13,
cg18639088,NA,NA,NA,NA,0.457278075,NA,Meis2,Meis2_Intergenic_downstream,2,115856506,115856555,115856506,115856507,50,-,CGGACTTGGGGTGTGAGCCCAGCTCAACTTCATCTATTAATTTAACATGT,Distal Intergenic,2,115864227,115868867,4641,2,Meis2-219,12361,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,10,97,17536,ENSMUSG00000027210,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg18701907,NA,-0.176927743,NA,NA,NA,NA,Usp25,Usp25_Exon,16,77237200,77237249,77237200,77237201,50,+,CGGCCATGCTCGAAGCCAGCTCTGCAGCTCAGCCAATCAGTGACATCATT,"Exon (Mir99ahg-214/Mir99ahg-214, exon 2 of 4)",16,77083900,77108205,24306,1,Usp25-203,153300,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,5,30940,ENSMUSG00000022867,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg18766286,-1.542831404,NA,NA,NA,NA,NA,Lcor,Lcor_Exon,19,41558790,41558839,41558838,41558839,50,-,ATCAGTACAGCTATAGCTCTTTGGTAATGGGTTCACAAACGGAGAGCGCG,"Exon (Lcor-201/Lcor, exon 8 of 8)",19,41482637,41562261,79625,1,Lcor-201,76153,Lcor-201;Lcor-204;Lcor-206;Lcor-202;Lcor-205,Lcor;Lcor;Lcor;Lcor;Lcor,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,25,212391,ENSMUSG00000025019,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx2,
cg18776124,-0.358059351,NA,-0.811449542,NA,NA,NA,Dlg2,Dlg2_Exon,7,90477023,90477072,90477023,90477024,50,-,CGAAGAGATGGCATGATGTGAATGACTCCAGTGTGAAGAAATCTGCTTCG,Promoter (<=1kb),7,90476672,90479068,2397,1,Dlg2-211,351,Dlg2-211;Dlg2-215;Dlg2-216;Dlg2-217;Tmem126b-201;Tmem126b-202,Dlg2;Dlg2;Dlg2;Dlg2;Tmem126b;Tmem126b,0;0;-100;0;-1022;-1028,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,21,23859,ENSMUSG00000052572,conserved gene but different region,,,,,,,,,,,,,TRUE,PromF3,
cg18779960,NA,NA,NA,NA,0.1416087,NA,Hoxc4,Hoxc4_Intergenic_downstream,15,103061674,103061723,103061674,103061675,50,-,CGCAGCCGCCTTTGTACGCGTGATTTATGACTTCAGTCTTGGTTCACCAA,Distal Intergenic,15,103034395,103036852,2458,1,Hoxc4-201,27328,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,32,91,15423,ENSMUSG00000075394,mapped to different genes,15,103061537,103061809,273,*,273,19,0.586080586,0.8125,0.06959707,7.69E-12,CpGisland,TRUE,,
cg18808650,NA,0.393463237,NA,NA,NA,NA,Map4k4,Map4k4_Exon,1,40000592,40000641,40000640,40000641,50,+,AACAAGAACAAGCATATCTCCTGTCTCTACAGCATGACCATAGGAGGCCG,"Exon (Map4k4-201/Map4k4, exon 15 of 31)",1,39900913,40026310,125398,1,Map4k4-201,99679,Map4k4-201;Map4k4-202;Map4k4-213;Map4k4-218;Map4k4-215;Map4k4-217;Map4k4-209;Map4k4-216;Map4k4-208;Map4k4-206;Map4k4-205,Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,12,26921,ENSMUSG00000026074,conserved gene and region,1,40000626,40000692,67,*,67,7,0.731343284,0.797619048,0.104477612,9.82E-06,CpGisland,TRUE,TxEx2,
cg18809289,NA,NA,NA,NA,-0.023318813,NA,Alox5,Alox5_Exon,6,116460887,116460936,116460935,116460936,50,-,GAAGTCGTTGTAGAAGGGCTTGTCCAGCAGGTGCTTCTCGCTGCAGCCCG,Promoter (<=1kb),6,116410077,116461178,51102,2,Alox5-201,242,Alox5-201;Alox5-204;Alox5-208;Alox5-202;Alox5-207,Alox5;Alox5;Alox5;Alox5;Alox5,0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,11689,ENSMUSG00000025701,conserved gene and region,6,116460821,116461250,430,*,430,34,0.66744186,0.716315532,0.079069767,1.40E-22,CpGisland,TRUE,,
cg18833170,NA,NA,NA,-0.039814497,NA,NA,Tnrc6a,Tnrc6a_threeUTR,7,123162703,123162752,123162703,123162704,50,-,CGATTTCGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTCAGCATTT,3' UTR,7,123124177,123193987,69811,1,Tnrc6a-203,38526,Tnrc6a-209;Tnrc6a-203;Tnrc6a-201;Tnrc6a-210,Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,TRUE,FALSE,threeUTR,5,24,233833,ENSMUSG00000052707,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg18862618,NA,0.1620311,NA,NA,NA,NA,Fam102b,Fam102b_Exon,3,108992684,108992733,108992684,108992685,50,-,CGGCGAGTGGTATTTCCTGATCCAGCAAACTCTGCCAGGTTTAGATCTGC,"Exon (Fam102b-201/Fam102b, exon 4 of 11)",3,108970997,109027273,56277,2,Fam102b-201,34540,Fam102b-201;Fam102b-202,Fam102b;Fam102b,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,3,329739,ENSMUSG00000040339,conserved gene and region,,,,,,,,,,,,,TRUE,Tx6,
cg18864227,0.04124236,NA,NA,NA,NA,NA,Zeb2,Zeb2_Intergenic_upstream,2,45185320,45185369,45185368,45185369,50,-,TCTCTGTTTCCTTTCTGCCAGTACCTAATATCAGCTATGCCCAGGAGCCG,Distal Intergenic,2,44983632,45117395,133764,2,Zeb2-212,-67974,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,9,158,24136,ENSMUSG00000026872,mapped to different genes,,,,,,,,,,,,,TRUE,PromF2,
cg18872272,0.248355313,NA,NA,NA,NA,NA,Acap2,Acap2_threeUTR,16,31101833,31101882,31101881,31101882,50,+,CCATAAAGTCCTTCTGATTCCCGCATCTCTTCATTCATTCTTGCTAAACG,3' UTR,16,31092412,31201245,108834,2,Acap2-204,99363,Acap2-204;Acap2-201;Acap2-203;Acap2-202;Acap2-206;Acap2-207,Acap2;Acap2;Acap2;Acap2;Acap2;Acap2,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,4,78618,ENSMUSG00000049076,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx7,
cg18891221,NA,NA,-0.044386291,NA,NA,NA,Lrmda,Lrmda_Intron,14,22783630,22783679,22783630,22783631,50,-,CGTGCTCAGCAGAGGACTGCAATTACAGTTTAAGACAGCTACTTTTTATT,"Intron (Lrmda-201/Lrmda, intron 5 of 6)",14,22019712,23056085,1036374,1,Lrmda-201,763918,Lrmda-201;Lrmda-204;Lrmda-206,Lrmda;Lrmda;Lrmda,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,157,157,76633,ENSMUSG00000063458,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg18913902,NA,0.175545632,NA,NA,NA,0.327918191,Cadps2,Cadps2_Intron,6,23273022,23273071,23273070,23273071,50,+,GCCAGGAGTTGCCACTGACTATGGAAATTGCCACACCAGGGCTATAAACG,"Intron (Cadps2-213/Cadps2, intron 28 of 29)",6,23262773,23839137,576365,2,Cadps2-213,566066,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-211;Cadps2-207;Cadps2-202;Cadps2-210,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg18961523,NA,0.000415809,NA,NA,NA,NA,Fam120a,Fam120a_Exon,13,48910322,48910371,48910370,48910371,50,-,TAAACAGGACTCCGTAAACATACTGACGAACTGGCCTATAGAGCAGAGCG,"Exon (Fam120a-201/Fam120a, exon 10 of 18)",13,48879219,48968017,88799,2,Fam120a-201,57646,Fam120a-201,Fam120a,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,8,218236,ENSMUSG00000038014,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg18966350,0.03840389,NA,NA,NA,NA,NA,Tfap2d,Tfap2d_Exon,1,19166125,19166174,19166125,19166126,50,-,CGGAAAACTTCAGAGGCTGCCGTGAAAGAGGGCAAAACAGAAAAGACAGA,"Exon (Tfap2d-201/Tfap2d, exon 8 of 8)",1,19103022,19166346,63325,1,Tfap2d-201,63103,Tfap2d-201,Tfap2d,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,14,23,226896,ENSMUSG00000042596,conserved gene and region,,,,,,,,,,,,,TRUE,Quies2,
cg19046398,-0.349689514,NA,NA,NA,NA,NA,Nol4l,Nol4l_Exon,2,153529491,153529540,153529491,153529492,50,-,CGGCCGCTGCCCAGGCGGAAGCCCTTGGAGCGCACCCAGAACTGGAACTT,Promoter (<=1kb),2,153407462,153529971,122510,2,Nol4l-201,431,Nol4l-201,Nol4l,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,10,14,329540,ENSMUSG00000061411,conserved gene and region,2,153528543,153530628,2086,*,2086,233,0.761744966,0.771121688,0.111697028,6.66E-188,CpGisland,TRUE,PromF5,
cg19047543,NA,0.034352192,NA,NA,NA,NA,Eri3,Eri3_Intron,4,117605898,117605947,117605946,117605947,50,+,CCCTCCCCTCTCATACAATATTTATCCAGGGATGGGAGTCAGATGCAGCG,"Intron (Eri3-201/Eri3, intron 6 of 8)",4,117550365,117674297,123933,1,Eri3-201,55533,Eri3-201;Eri3-206;Eri3-202;Eri3-204,Eri3;Eri3;Eri3;Eri3,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,82,97,140546,ENSMUSG00000033423,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg19092999,-0.133031327,NA,NA,NA,NA,NA,Usf3,Usf3_Promoter,16,44172956,44173005,44173004,44173005,50,+,CTACCTTTAAGAATATTTCCTGTTTCTTCAACCCAACTTGCACACCTCCG,Promoter (<=1kb),16,44173246,44227465,54220,1,Usf3-202,-241,Usf3-202;Usf3-201;Usf3-203;Usf3-204,Usf3;Usf3;Usf3;Usf3,-241;-392;-392;-392,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,1,1,207806,ENSMUSG00000068284,conserved gene and region,16,44173004,44173764,761,*,761,86,0.768725361,0.766831486,0.113009198,2.66E-70,CpGisland,TRUE,TSS2,
cg19106010,NA,NA,NA,NA,0.775316195,NA,Ankrd44,Ankrd44_Exon,1,54778303,54778352,54778351,54778352,50,-,ACAGCCCGGTGCAGTGGAGTCAGCCACATGTTGTCCTTGGCATTTACACG,"Exon (Ankrd44-210/Ankrd44, exon 4 of 28)",1,54645340,54926387,281048,2,Ankrd44-210,148035,Ankrd44-210;Ankrd44-201;Ankrd44-209;Ankrd44-214;Ankrd44-208;Ankrd44-202,Ankrd44;Ankrd44;Ankrd44;Ankrd44;Ankrd44;Ankrd44,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,329154,ENSMUSG00000052331,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg19204561,-0.088026537,NA,NA,NA,NA,NA,Add3,Add3_Intron,19,53194809,53194858,53194809,53194810,50,-,CGTGACATGAACTTTGTGTGTAAGAGTGGGTTCATTGAATTAAAAAAAAG,"Intron (Add3-203/Add3, intron 1 of 13)",19,53140443,53247399,106957,1,Add3-203,54366,Add3-203;Add3-208;Add3-205;Add3-212;Add3-216;Add3-204;Add3-211;Add3-202;Add3-215;Add3-213;Add3-214;Add3-201;Add3-206;Add3-207;Add3-209;Add3-210,Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3;Add3,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-3188,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,3,27360,ENSMUSG00000025026,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg19272508,-2.496807773,NA,NA,NA,NA,NA,Trim8,Trim8_Exon,19,46502797,46502846,46502797,46502798,50,-,CGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCCTGG,"Exon (Trim8-201/Trim8, exon 1 of 6)",19,46501702,46516848,15147,1,Trim8-201,1095,Trim8-201,Trim8,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,15,21,93679,ENSMUSG00000025034,conserved gene and region,19,46502503,46503142,640,*,640,53,0.6359375,0.821705426,0.0828125,6.38E-36,CpGisland,TRUE,PromF4,
cg19279211,0.015494531,NA,NA,NA,NA,NA,Pspc1,Pspc1_Exon,14,56771702,56771751,56771750,56771751,50,+,TACGTTGTTAGCAAGAATGCCCCATCACCACATCTTTCCAGAGCCTTTCG,"Exon (Pspc1-201/Pspc1, exon 2 of 9)",14,56720710,56778316,57607,2,Pspc1-201,6565,Pspc1-201;Pspc1-202;Pspc1-204,Pspc1;Pspc1;Pspc1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,66645,ENSMUSG00000021938,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg19282146,NA,NA,NA,NA,-1.896054666,NA,Pknox2,Pknox2_Intron,9,37121933,37121982,37121981,37121982,50,+,GCACATAAATTAAAGCGGCCAACTTGTATGCACACATGCACACTGGCACG,"Intron (Pknox2-201/Pknox2, intron 1 of 12)",9,36890982,37147407,256426,2,Pknox2-201,25425,Pknox2-201;Pknox2-202;Pknox2-210;Pknox2-209;Pknox2-212;Pknox2-211,Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,47,208076,ENSMUSG00000035934,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC3,
cg19282646,NA,0.304206483,NA,NA,NA,NA,Gm13518,Gm13518_Intergenic_downstream,2,56456270,56456319,56456318,56456319,50,+,TCTTGTATGCTGTCATCCCCTGAGCCTGATAACACAAAATCATTTCCACG,Distal Intergenic,2,56039853,56040085,233,1,Gm13518-201,416417,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,37,37,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk8,
cg19291010,-1.0282214,NA,-2.032718931,NA,NA,NA,Bcl9,Bcl9_Exon,3,97215348,97215397,97215396,97215397,50,+,TTGGAATCCAGCTGGGGGTTTCCAGATGGGGACATCACTGTAGGGGGACG,"Exon (Bcl9-201/Bcl9, exon 5 of 10)",3,97203662,97227364,23703,2,Bcl9-201,11967,Bcl9-201;Bcl9-207;Bcl9-203;Bcl9-206;Bcl9-204;Bcl9-205;Bcl9-208,Bcl9;Bcl9;Bcl9;Bcl9;Bcl9;Bcl9;Bcl9,0;0;-1339;0;13449;12138;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,10,77578,ENSMUSG00000038256,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg19308205,NA,NA,NA,NA,-0.717974785,-0.427624896,Prrc2b,Prrc2b_Exon,2,32183183,32183232,32183183,32183184,50,+,CGCCTGCAAACCTGCCAAGCTTGAAGTCTGAAAACAAAGGAAACGACCCC,Promoter (<=1kb),2,32183226,32231162,47937,1,Prrc2b-206,0,Prrc2b-201;Prrc2b-202;Prrc2b-206,Prrc2b;Prrc2b;Prrc2b,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,6,227723,ENSMUSG00000039262,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg19323953,0.040382831,NA,NA,NA,NA,NA,Slc35b3,Slc35b3_Intergenic_upstream,13,39297197,39297246,39297245,39297246,50,-,ATGGATGGGATTTCATTTAGTCTGTCTTCTCCCTTTCCAGTTCAGATGCG,Distal Intergenic,13,38932136,38960875,28740,2,Slc35b3-201,-336371,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,9,11,108652,ENSMUSG00000021432,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg19331623,1.452950836,NA,NA,NA,NA,NA,Tfap2a,Tfap2a_Intron,13,40730627,40730676,40730627,40730628,50,+,CGTTCCTGGAGCCTCCTAATAGCAGATATTCATGACTATTAATATTACAC,"Intron (Gm26688-201/Gm26688-201, intron 1 of 2)",13,40715675,40733823,18149,2,Tfap2a-202,3147,Tfap2a-201;Tfap2a-202;Tfap2a-205;Tfap2a-203;Tfap2a-209;Tfap2a-208;Tfap2a-206;Tfap2a-204;Tfap2a-207,Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,57,21418,ENSMUSG00000021359,mapped to different genes,13,40730503,40730628,126,*,126,13,0.571428571,1.267801858,0.103174603,2.07E-10,CpGisland,TRUE,PromF5,
cg19351577,0.182961778,NA,NA,NA,NA,NA,Tcf4,Tcf4_Intron,18,69346892,69346941,69346940,69346941,50,+,CTGTGATCCATTCATTTCTCGCTCTACCTCCTGTTGCATAAAATGATGCG,"Intron (Tcf4-259/Tcf4, intron 1 of 6)",18,69343356,69564082,220727,1,Tcf4-259,3536,Tcf4-259;Tcf4-201;Tcf4-207;Tcf4-210;Tcf4-240;Tcf4-254;Tcf4-246;Tcf4-206;Tcf4-202;Tcf4-257;Tcf4-232;Tcf4-215;Tcf4-248;Tcf4-231;Tcf4-205;Tcf4-253;Tcf4-244;Tcf4-233;Tcf4-238;Tcf4-245;Tcf4-249;Tcf4-219;Tcf4-235;Tcf4-227,Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4;Tcf4,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,42,66,21413,ENSMUSG00000053477,conserved gene but different region,,,,,,,,,,,,,TRUE,TSS1,
cg19364802,-0.121573889,NA,NA,NA,NA,NA,Bcor,Bcor_Intron,X,12077534,12077583,12077534,12077535,50,-,CGCTAATGAGCTGTGCAGCCCATTGATCCGGAGAACACTTCCTAATTAAC,"Intron (Bcor-202/Bcor, intron 1 of 14)",20,12036740,12080553,43814,2,Bcor-202,2970,Bcor-202;Bcor-203;Bcor-204;Bcor-206;Bcor-201;Bcor-207;Bcor-205,Bcor;Bcor;Bcor;Bcor;Bcor;Bcor;Bcor,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,56,74,71458,ENSMUSG00000040363,conserved gene and region,X,12077216,12077550,335,*,335,28,0.671641791,0.755476804,0.08358209,2.26E-19,CpGisland,TRUE,PromF5,
cg19399365,NA,NA,NA,NA,-0.026204638,-0.515768231,Grem1,Grem1_Promoter,2,113758895,113758944,113758895,113758896,50,-,CGCCTGGAATGCACAGCAAATCACATTTTCCGCTCCCGTTGGAGAGGGAA,Promoter (<=1kb),2,113746164,113758646,12483,2,Grem1-201,-298,Grem1-201,Grem1,-249,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,4,4,23892,ENSMUSG00000074934,conserved gene but different region,2,113758428,113758970,543,*,543,54,0.67587477,0.887953486,0.099447514,4.38E-41,CpGisland,TRUE,BivProm1,
cg19411464,-0.199226016,NA,NA,NA,NA,NA,Srsf11,Srsf11_threeUTR,3,158023344,158023393,158023344,158023345,50,+,CGTGTCGGCTGCTTCACTATAAAGCACACAGAAAAATCAAGATACACAAG,3' UTR,3,158010473,158036639,26167,2,Srsf11-204,13246,Srsf11-204;Srsf11-213;Srsf11-202;Srsf11-207;Srsf11-201;Srsf11-217;Srsf11-218;Srsf11-206;Srsf11-209;Srsf11-210;Srsf11-212;Srsf11-203;Srsf11-208;Srsf11-215,Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11;Srsf11,0;0;0;-204;0;-1340;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,6,8,69207,ENSMUSG00000055436,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx7,
cg19442846,NA,NA,-0.274972085,NA,NA,NA,Ostm1,Ostm1_Intron,10,42613814,42613863,42613862,42613863,50,+,CACAATGGGCCTCTTCACTTTTCAGGTTTGGGAGACCTGGGTGACCTACG,"Intron (Ostm1-202/Ostm1, intron 2 of 5)",10,42583835,42698323,114489,1,Ostm1-202,29979,Ostm1-202;Ostm1-203,Ostm1;Ostm1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,22,14628,ENSMUSG00000038280,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg19458915,-0.013336898,NA,NA,NA,NA,NA,Lmo4,Lmo4_Intron,3,144203990,144204039,144204038,144204039,50,-,ATGAATCAAGAAGACTGACCAGAAACTGACTCCCCTGATAACTAAGGACG,"Intron (Lmo4-201/Lmo4, intron 1 of 4)",3,144188530,144205220,16691,2,Lmo4-201,1181,Lmo4-203;Lmo4-201;Lmo4-202;Lmo4-207;Lmo4-208;Lmo4-205;Lmo4-204,Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,54,16911,ENSMUSG00000028266,conserved gene and region,,,,,,,,,,,,,TRUE,PromF6,
cg19482025,NA,NA,-0.266376966,NA,NA,NA,Fli1,Fli1_Promoter,9,32543074,32543123,32543122,32543123,50,-,CCTGTCTGCTTCTCAATCCAGGGGTCTGCTCCGGGGCTCCCCTGGGACCG,Promoter (<=1kb),9,32428059,32542861,114803,2,Fli1-202,-262,Fli1-201;Fli1-202,Fli1;Fli1,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,5,15,14247,ENSMUSG00000016087,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg19507206,NA,NA,NA,NA,-0.163706986,-0.067331177,Lbx1,Lbx1_Intergenic_upstream,19,45293662,45293711,45293710,45293711,50,-,ATGGTAATTAGGAGGGCCCTCATTACCCTGGCGGAGCCGGCTGAGAGCCG,Distal Intergenic,19,45232684,45235812,3129,2,Lbx1-201,-57899,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,15,50,16814,ENSMUSG00000025216,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg19510557,NA,NA,-0.006722396,NA,NA,NA,Nog,Nog_Intergenic_downstream,11,89300227,89300276,89300227,89300228,50,-,CGCCCCCAGGGTAGGTGTGAAAGACACGTGTCCCCATTGTGAAGGGCCTG,Distal Intergenic,11,89300638,89302332,1695,2,Nog-201,2105,Nog-201,Nog,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,16,36,18121,ENSMUSG00000048616,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg19604874,NA,NA,NA,NA,0.742383507,NA,Pcdh7,Pcdh7_threeUTR,5,57913162,57913211,57913162,57913163,50,-,CGTAGAGTGACGTTTTCTGTTGTGAGTCAGCCTCAGGACCCACATCAGGG,3' UTR,5,57717967,58133230,415264,1,Pcdh7-203,195195,Pcdh7-203;Pcdh7-202;Pcdh7-205;Pcdh7-206;Pcdh7-207;Pcdh7-204,Pcdh7;Pcdh7;Pcdh7;Pcdh7;Pcdh7;Pcdh7,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,5,13,54216,ENSMUSG00000029108,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhWk8,
cg19615848,NA,0.002405404,NA,NA,0.928339236,0.173287035,Hoxc5,Hoxc5_Exon,15,103009892,103009941,103009940,103009941,50,+,CACAGACCTCAATCGCTCAGGATTTTAGTTCTGAGCAGGGCAGGACTGCG,"Exon (Hoxc6-202/Hoxc6, exon 2 of 3)",15,102967443,103015676,48234,1,Hoxc5-202,42449,Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg19673529,-0.04470438,NA,NA,NA,NA,NA,Smad5,Smad5_Exon,13,56727467,56727516,56727515,56727516,50,+,AGTTTAGGAACCTGAGCCACAATGAACCACACATGCCACAAAATGCCACG,"Exon (Smad5-201/Smad5, exon 3 of 7)",13,56703010,56742377,39368,1,Smad5-201,24457,Smad5-201;Smad5-206;Smad5-203;Smad5-204;Smad5-202,Smad5;Smad5;Smad5;Smad5;Smad5,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,17129,ENSMUSG00000021540,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg19674753,-0.211287413,NA,NA,NA,NA,NA,Slc6a9,Slc6a9_fiveUTR,4,117835387,117835436,117835435,117835436,50,+,TCGGGAGGCTGATGCAACTTTCCCTTTAAGAAAGCCACCTGGGCGCACCG,Promoter (<=1kb),4,117835397,117868337,32941,1,Slc6a9-210,0,Slc6a9-202;Slc6a9-208;Slc6a9-201;Slc6a9-207;Slc6a9-210;Slc6a9-206,Slc6a9;Slc6a9;Slc6a9;Slc6a9;Slc6a9;Slc6a9,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,5,8,14664,ENSMUSG00000028542,conserved gene and region,4,117835430,117835463,34,*,34,6,0.823529412,1.046153846,0.176470588,2.67E-06,CpGisland,TRUE,PromF5,
cg19676874,NA,NA,NA,NA,-0.016029722,NA,Ostm1,Ostm1_Intron,10,42636447,42636496,42636447,42636448,50,+,CGTGATTGAAGGGTTTTTAACAATTAACATAATCAGAAAATGAGCTGAGA,"Intron (Ostm1-202/Ostm1, intron 2 of 5)",10,42583835,42698323,114489,1,Ostm1-202,52612,Ostm1-202;Ostm1-203,Ostm1;Ostm1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,21,22,14628,ENSMUSG00000038280,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg19694311,NA,0.022284697,NA,NA,NA,NA,Cryba4,Cryba4_Intergenic_downstream,5,112098763,112098812,112098811,112098812,50,-,TCATTTTCTGAGGCCTGCAAGTCAGCCAGGAAATAGCTATTATTCCATCG,Distal Intergenic,5,112246494,112251162,4669,2,Cryba4-202,152399,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,8,8,12959,ENSMUSG00000066975,mapped to different genes,5,112098700,112098855,156,*,156,13,0.525641026,1.207142857,0.083333333,3.25E-09,CpGisland,TRUE,EnhA20,
cg19696052,0.359415196,NA,NA,NA,NA,NA,Dlx1,Dlx1_fiveUTR,2,71529983,71530032,71529983,71529984,50,-,CGCGAGAAGAGATGACCATGACCACCATGCCAGAAAGTCTCAACAGCCCC,5' UTR,2,71528113,71533980,5868,1,Dlx1-201,1870,Dlx1-201;Dlx1-202;Dlx1-205;Dlx1-204;Dlx1-203;Dlx1-206;Metap1d-201;Metap1d-205,Dlx1;Dlx1;Dlx1;Dlx1;Dlx1;Dlx1;Metap1d;Metap1d,0;0;0;0;0;-748;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,12,36,13390,ENSMUSG00000041911,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg19705440,NA,-0.062353515,NA,NA,NA,NA,Skor1,Skor1_Promoter,9,63152069,63152118,63152069,63152070,50,+,CGGCAGTTTTCGTCAGTTAATTAGGTTTAATTTACATAATTAGTACAGTA,Promoter (3-4kb),9,63138170,63148961,10792,2,Skor1-202,-3108,Skor1-202,Skor1,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,6,15,207667,ENSMUSG00000022245,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg19707231,-0.373674946,NA,NA,NA,NA,NA,Nav1,Nav1_Exon,1,135465846,135465895,135465846,135465847,50,+,CGTGGGGTCTCGGAAGGATCCTGACCGAATCATTCCCTTGGGTCTCTCGG,"Exon (Nav1-201/Nav1, exon 10 of 30)",1,135434580,135585355,150776,2,Nav1-201,119460,Nav1-201;Nav1-202;Nav1-208;Nav1-205;Nav1-209;Nav1-206;Nav1-207,Nav1;Nav1;Nav1;Nav1;Nav1;Nav1;Nav1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,12,215690,ENSMUSG00000009418,mapped to different genes,1,135465776,135465997,222,*,222,16,0.630630631,0.746846089,0.072072072,2.79E-10,CpGisland,TRUE,TxEnh4,
cg19854621,NA,NA,0.049771802,NA,NA,NA,BC005537,BC005537_Exon,13,24803399,24803448,24803399,24803400,50,-,CGGAAGAAACAAGCTCTGAACAGACTACGTGCTCAGCTTAGAAAGAAAAA,"Exon (BC005537-201/BC005537, exon 1 of 5)",13,24801657,24816197,14541,1,BC005537-201,1742,BC005537-201;BC005537-202,BC005537;BC005537,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,79555,ENSMUSG00000019132,conserved gene and region,,,,,,,,,,,,,TRUE,PromF6,
cg19923477,-0.292143194,NA,NA,NA,NA,NA,Kiz,Kiz_Intron,2,146958192,146958241,146958240,146958241,50,-,CACTTACTGCAGTCACTCCTTGTGCTTTATTGCTTTTACAAGTGGTCTCG,"Intron (Kiz-201/Kiz, intron 12 of 13)",2,146855864,146970097,114234,1,Kiz-201,102328,Kiz-201;Kiz-202,Kiz;Kiz,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,29,228730,ENSMUSG00000074749,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA6,
cg19933464,-0.012393707,NA,NA,NA,NA,NA,Gpm6b,Gpm6b_threeUTR,X,166383940,166383989,166383988,166383989,50,+,CATGTCCTATCACCTGTTCATTGTGGCCTGTGCAGGAGCTGGTGCCACCG,3' UTR,20,166238911,166388988,150078,1,Gpm6b-209,145029,Gpm6b-209;Gpm6b-201;Gpm6b-208;Gpm6b-210;Gpm6b-212;Gpm6b-202;Gpm6b-203;Gpm6b-204;Gpm6b-205;Gpm6b-206;Gpm6b-207,Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b;Gpm6b,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,2,14758,ENSMUSG00000031342,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx3,
cg19961913,NA,NA,NA,-0.534399338,NA,NA,Hibadh,Hibadh_Intron,6,52584555,52584604,52584555,52584556,50,-,CGTGCCACCCAGCTGCTGCATGGTCACGTCCATCTGGAGCTCTCTAGCTA,"Intron (Hibadh-201/Hibadh, intron 4 of 7)",6,52546228,52640389,94162,2,Hibadh-201,55785,Hibadh-201;Hibadh-203,Hibadh;Hibadh,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,11,13,58875,ENSMUSG00000029776,conserved gene and region,,,,,,,,,,,,,TRUE,"EnhA19,EnhA19",
cg19964527,NA,0.134645218,NA,NA,NA,NA,Hoxc4,Hoxc4_threeUTR,15,103035744,103035793,103035744,103035745,50,-,CGAAGGAGAAGGATCGAGATCGCCCACTCGCTGTGCCTCTCTGAGAGGCA,3' UTR,15,103018934,103036405,17472,1,Hoxc4-202,16810,Hoxc4-202;Hoxc4-201,Hoxc4;Hoxc4,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,17,91,15423,ENSMUSG00000075394,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm2,
cg19981759,NA,NA,NA,NA,0.003022049,NA,Zic1,Zic1_fiveUTR,9,91365750,91365799,91365750,91365751,50,-,CGGTGAGCGCGAGACTGATAGCAGCAATCATTCCTGCAGATAAATGAATT,Promoter (<=1kb),9,91358058,91365768,7711,2,Zic1-201,0,Zic1-201;Zic1-202;Zic1-203;Zic4-208;Zic4-206;Zic4-207;Zic4-211;Zic4-204;Zic4-203,Zic1;Zic1;Zic1;Zic4;Zic4;Zic4;Zic4;Zic4;Zic4,0;0;-2696;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,4,10,22771,ENSMUSG00000032368,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg19993539,-0.111577072,NA,NA,NA,NA,NA,Mxi1,Mxi1_Exon,19,53370310,53370359,53370358,53370359,50,+,ATGGACAGCATTGGATCAACTATTTCTTCAGATCGTTCTGATTCAGAGCG,"Exon (Mxi1-201/Mxi1, exon 5 of 6)",19,53310518,53373293,62776,1,Mxi1-201,59792,Gm10197-201;Mxi1-201;Mxi1-208;Mxi1-203;Mxi1-202;Mxi1-205;Mxi1-206;Mxi1-204;Mxi1-207,Gm10197;Mxi1;Mxi1;Mxi1;Mxi1;Mxi1;Mxi1;Mxi1;Mxi1,1407;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,10,17859,ENSMUSG00000025025,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg20002283,-1.161622024,NA,NA,NA,NA,NA,Kctd1,Kctd1_Intron,18,15063641,15063690,15063689,15063690,50,-,AATGACCTTCAGCTACCGGGAGGCAAAGCCGGGCTCTTAAAGGAGCCGCG,"Intron (Kctd1-201/Kctd1, intron 1 of 4)",18,14968685,15151446,182762,2,Kctd1-201,87756,Kctd1-201;Kctd1-202;Kctd1-206;Kctd1-205,Kctd1;Kctd1;Kctd1;Kctd1,0;0;0;-1752,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,24,106931,ENSMUSG00000036225,conserved gene and region,18,15063315,15063752,438,*,438,43,0.673515982,0.892352885,0.098173516,1.42E-32,CpGisland,TRUE,,
cg20012467,NA,NA,NA,0.152144488,NA,NA,Dll4,Dll4_Promoter,2,119322243,119322292,119322291,119322292,50,+,AGGCGGGCGGGAAGCTGCTGCATTAAATTGTAAAATCGATTTATTGACCG,Promoter (3-4kb),2,119325784,119335962,10179,1,Dll4-201,-3492,Dll4-201,Dll4,0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,8,20,54485,ENSMUSG00000027314,conserved gene and region,2,119322082,119322448,367,*,367,37,0.632152589,1.026301867,0.100817439,1.47E-28,CpGisland,TRUE,BivProm2,
cg20025626,NA,NA,NA,NA,0.111618069,NA,Tfap2a,Tfap2a_Intergenic_downstream,13,40709203,40709252,40709251,40709252,50,+,TTTGGCCCGGGGCGACACTTCCCCCCGGCTGAGCTTAGAGAATGGGAGCG,Distal Intergenic,13,40716724,40728944,12221,2,Tfap2a-209,19692,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,15,57,21418,ENSMUSG00000021359,mapped to different genes,13,40709088,40709361,274,*,274,22,0.653284672,0.763037975,0.080291971,5.99E-15,CpGisland,TRUE,ReprPC1,
cg20031917,NA,NA,NA,0.213044913,NA,NA,Nfib,Nfib_threeUTR,4,82290345,82290394,82290393,82290394,50,-,GTTCATTTGCAACCCACAAAAAGTACCCAAAGAACGTTATCCTCCAACCG,3' UTR,4,82290173,82505308,215136,2,Nfib-201,214914,Nfib-201;Nfib-203;Nfib-202,Nfib;Nfib;Nfib,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,11,66,18028,ENSMUSG00000008575,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg20117682,NA,NA,NA,NA,0.511744366,NA,Sp8,Sp8_Promoter,12,118843996,118844045,118843996,118843997,50,-,CGACATGGATGAGACAGATGATATGATTAAGGGGCTGTGGTCGTTTTAAT,Promoter (2-3kb),12,118846329,118852576,6248,1,Sp8-201,-2333,Sp8-201;Sp8-202,Sp8;Sp8,0;-3541,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,29,320145,ENSMUSG00000048562,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg20128261,NA,NA,NA,NA,-0.737710358,NA,Smtn,Smtn_Exon,11,3520815,3520864,3520863,3520864,50,+,CGGTAGAATTCCTGGATGTACGTGTACACGCACTTCCAGTCAGGCTCTCG,"Exon (Smtn-201/Smtn, exon 8 of 9)",11,3517523,3527937,10415,2,Smtn-201,7073,Selenom-202;Selenom-203;Selenom-201;Smtn-201;Smtn-204;Smtn-203;Smtn-208;Smtn-202;Smtn-210;Smtn-206,Selenom;Selenom;Selenom;Smtn;Smtn;Smtn;Smtn;Smtn;Smtn;Smtn,6131;6113;5948;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,6,29856,ENSMUSG00000020439,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg20128948,0.110964476,NA,NA,NA,NA,NA,Hoxc5,Hoxc5_Exon,15,103009674,103009723,103009674,103009675,50,+,CGTCGCCCTCAATTCCACCGCCTATGATCCAGTGAGGCATTTCTCGACCT,"Exon (Hoxc6-202/Hoxc6, exon 2 of 3)",15,102967443,103015676,48234,1,Hoxc5-202,42231,Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,mapped to different genes,15,103009647,103009812,166,*,166,14,0.602409639,0.948184415,0.084337349,5.77E-10,CpGisland,TRUE,BivProm4,
cg20149183,NA,NA,0.302471163,NA,NA,NA,Otp,Otp_Promoter,13,94875488,94875537,94875488,94875489,50,-,CGGAGTGGGGGACTCTCCGGGCGCTGACATTTGCAGGCTGCCCTCCTGAT,Promoter (<=1kb),13,94875602,94885130,9529,1,Otp-201,-114,Otp-201,Otp,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene but different region,13,94875299,94875591,293,*,293,22,0.682593857,0.651111111,0.075085324,2.54E-14,CpGisland,TRUE,BivProm2,
cg20168281,NA,NA,NA,NA,1.019385911,NA,Evx1,Evx1_Exon,6,52314189,52314238,52314237,52314238,50,-,CGAGTCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCGGACTGCG,Promoter (<=1kb),6,52313498,52318378,4881,1,Evx1-201,691,Evx1-201;Evx1-202,Evx1;Evx1,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,19,14028,ENSMUSG00000005503,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg20212950,-0.399690085,NA,NA,NA,NA,NA,Qk,Qk_threeUTR,17,10213364,10213413,10213412,10213413,50,-,TCTGCGGTCACAATCCTTTGGTAAGGATGGACACGCATATCGTGCCTTCG,3' UTR,17,10202601,10319380,116780,2,Qk-204,105967,Qk-204;Qk-202;Qk-203;Qk-201;Qk-206;Qk-205,Qk;Qk;Qk;Qk;Qk;Qk,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,12,17,19317,ENSMUSG00000062078,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg20257626,NA,-0.010633292,NA,NA,NA,NA,Fam49a,Fam49a_Intergenic_downstream,12,12401520,12401569,12401568,12401569,50,+,GTCTATAAACAGAAGCAGGTTTTCTGTGATACGTTACCCCGATAAACCCG,Distal Intergenic,12,12262189,12343432,81244,1,Fam49a-204,139331,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,2,76820,ENSMUSG00000020589,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg20267980,NA,NA,0.148721828,NA,NA,NA,Cnot1,Cnot1_threeUTR,8,95728610,95728659,95728658,95728659,50,+,CACACCTTCTGCTGTGGCGTATGTGCCAGCATTCTTGCAATAAATATCCG,3' UTR,8,95719451,95807462,88012,2,Cnot1-202,78803,Cnot1-202;Cnot1-201;Cnot1-203;Cnot1-208;Cnot1-216;Cnot1-211;Cnot1-212;Cnot1-213,Cnot1;Cnot1;Cnot1;Cnot1;Cnot1;Cnot1;Cnot1;Cnot1,0;0;0;0;0;0;0;4077,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,8,24,234594,ENSMUSG00000036550,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg20315951,NA,NA,NA,NA,0.63927328,NA,Ovol1,Ovol1_Promoter,19,5560740,5560789,5560740,5560741,50,+,CGTTGGGAAATAACGGTGACAACCCACCTATTTGTTACCTGTCGAACCGG,Promoter (<=1kb),19,5549136,5560646,11511,2,Ovol1-201,-94,Ovol1-201;Ovol1-202,Ovol1;Ovol1,-94;-1337,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,2,2,18426,ENSMUSG00000024922,conserved gene and region,19,5560720,5561128,409,*,409,45,0.684596577,0.944863699,0.11002445,1.79E-36,CpGisland,TRUE,TSS2,
cg20367539,NA,NA,0.747465413,NA,NA,NA,Xpo1,Xpo1_fiveUTR,11,23261832,23261881,23261880,23261881,50,-,CAGTAATCTATGCCAGCAATTATGACAATGTTAGCAGACCATGCAGCTCG,5' UTR,11,23256041,23297597,41557,1,Xpo1-201,5791,Xpo1-201;Xpo1-204;Xpo1-203;Xpo1-206;Xpo1-202;Xpo1-205,Xpo1;Xpo1;Xpo1;Xpo1;Xpo1;Xpo1,0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,2,14,103573,ENSMUSG00000020290,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg20369280,-0.185106746,NA,NA,NA,NA,NA,BC052040,BC052040_Intron,2,115643920,115643969,115643920,115643921,50,+,CGCAGCAGCACCGCCATTTGTCAAAGTCAACCTTCTGATTGCTTTGGACC,"Intron (BC052040-203/BC052040, intron 5 of 10)",2,115581716,115778768,197053,1,BC052040-203,62204,BC052040-203;BC052040-201;BC052040-202,BC052040;BC052040;BC052040,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,37,49,399568,ENSMUSG00000040282,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg20375718,NA,0.366177365,NA,NA,NA,NA,Nav1,Nav1_Exon,1,135460703,135460752,135460703,135460704,50,+,CGTCTCTGCCAGGTGTCGCAGGCGGGATGTCATATTCACCAGGCTCTGCT,"Exon (Nav1-201/Nav1, exon 14 of 30)",1,135434580,135585355,150776,2,Nav1-201,124603,Nav1-201;Nav1-202;Nav1-208;Nav1-205;Nav1-209;Nav1-206;Nav1-207,Nav1;Nav1;Nav1;Nav1;Nav1;Nav1;Nav1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,11,12,215690,ENSMUSG00000009418,mapped to different genes,1,135460699,135460813,115,*,115,9,0.565217391,0.980113636,0.07826087,2.96E-06,CpGisland,TRUE,Tx5,
cg20376497,NA,NA,NA,NA,0.480611,NA,Nr2f1,Nr2f1_Exon,13,78181314,78181363,78181314,78181315,50,+,CGCCGGCGCCCAGGATAAGCCAGTGGGGTGATAATTAATGGAATACAATA,"Exon (3110006O06Rik-201/3110006O06Rik-201, exon 2 of 2)",13,78189872,78190443,572,2,Nr2f1-204,9080,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,25,55,13865,ENSMUSG00000069171,conserved gene and region,13,78181019,78181341,323,*,323,26,0.643962848,0.783687943,0.080495356,1.33E-17,CpGisland,TRUE,BivProm2,
cg20377527,NA,-0.171369438,NA,NA,NA,NA,Gm14006,Gm14006_Intron,2,128377864,128377913,128377864,128377865,50,-,CGAAACTGAATGTGGGTTGTGAAAGAACATTAAAATGAAGAAAATTTCCC,"Intron (Morrbid-211/Morrbid-211, intron 1 of 6)",2,128557254,128558234,981,2,Gm14006-201,180370,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,2,383791,NA,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg20382695,-0.019719594,NA,NA,NA,NA,NA,Atrnl1,Atrnl1_Exon,19,57611607,57611656,57611655,57611656,50,+,TGGGGGACCAGTGCCAGCACTGCCAGGGCAGGTTCAAGTAAGTGCCTTCG,Promoter (<=1kb),19,57611034,58133343,522310,1,Atrnl1-201,573,Atrnl1-201,Atrnl1,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,226255,ENSMUSG00000054843,conserved gene but different region,19,57611655,57611918,264,*,264,20,0.666666667,0.705128205,0.075757576,3.84E-13,CpGisland,TRUE,,
cg20421508,-0.051885952,NA,NA,NA,NA,NA,Otp,Otp_Promoter,13,94869079,94869128,94869127,94869128,50,-,TAATCGAGCCCACATGGAGGGCAGCAGCACTAATTACGGCGGGGGATGCG,Promoter (6-7kb),13,94875602,94885130,9529,1,Otp-201,-6523,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene and region,13,94869063,94869234,172,*,172,30,0.819767442,1.155913978,0.174418605,1.73E-31,CpGisland,TRUE,BivProm3,Low_complexity
cg20426932,-0.109910079,NA,NA,NA,NA,NA,Irx4,Irx4_Intergenic_downstream,13,73272082,73272131,73272082,73272083,50,-,CGTTACTTTTCATTAAGCGAGTCTGACAGCAGCATATTCAGGCTCGACAA,Downstream (2-3kb),13,73260497,73269608,9112,1,Irx4-201,11634,Irx4-202;Irx4-201,Irx4;Irx4,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,6,7,50916,ENSMUSG00000021604,conserved gene and region,13,73271779,73272166,388,*,388,36,0.615979381,0.992750533,0.092783505,1.98E-26,CpGisland,TRUE,ReprPC1,
cg20432233,NA,0.059596339,NA,NA,NA,NA,Gm11892,Gm11892_Intergenic_upstream,4,23983698,23983747,23983698,23983699,50,+,CGAGCCCAAAAGCGTGAAAGCTCCTTATAGGCTGCAGGATGTGGATGTGA,Distal Intergenic,4,24238100,24239301,1202,1,Gm11892-201,-254353,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,16,16,664973,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg20462566,NA,NA,NA,NA,0.213252259,NA,Mtx1,Mtx1_Exon,3,89216833,89216882,89216833,89216834,50,-,CGCCAAGACAACACTCGATGGCTGGAGGCCTCTGTTGTAGGCAAGATCAA,"Exon (Thbs3-201/Thbs3, exon 2 of 23)",3,89209356,89227052,17697,2,Mtx1-216,10170,Mtx1-219;Mtx1-201;Mtx1-202;Mtx1-203;Mtx1-214;Mtx1-215;Mtx1-216;Mtx1-210;Mtx1-212;Mtx1-211;Mtx1-209;Mtx1-208;Thbs3-201;Thbs3-207;Thbs3-203;Thbs3-202;Thbs3-209;Thbs3-205,Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Mtx1;Thbs3;Thbs3;Thbs3;Thbs3;Thbs3;Thbs3,-2498;-2403;-2476;-2926;-2993;-2921;0;-2971;-2948;-2956;-3444;-3007;0;0;0;0;-538;-4270,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,17827,ENSMUSG00000064068,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk2,
cg20463887,-0.078373184,NA,-0.414138871,-0.190309322,NA,NA,Nr2f2,Nr2f2_Intergenic_downstream,7,70346587,70346636,70346587,70346588,50,-,CGAAGTACAGAGACATCTCAATGAAATTTCCAAAGAAGAAAGAGAAATCA,Distal Intergenic,7,70353074,70355237,2164,2,Nr2f2-203,8650,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,19,69,11819,ENSMUSG00000030551,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg20477718,NA,NA,NA,NA,0.793371911,NA,Twist1,Twist1_Exon,12,33958496,33958545,33958544,33958545,50,+,CTCCAAGATGGCAAGCTGCAGCTATGTGGCTCACGAGCGGCTCAGCTACG,Promoter (<=1kb),12,33957671,33959829,2159,1,Twist1-201,825,Twist1-201,Twist1,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,7,22160,ENSMUSG00000035799,conserved gene and region,12,33958529,33958782,254,*,254,18,0.696850394,0.620352782,0.070866142,2.23E-11,CpGisland,TRUE,,
cg20504623,NA,NA,NA,NA,-0.131569596,NA,Scube3,Scube3_Exon,17,28166015,28166064,28166015,28166016,50,+,CGGCCAGACGGAGCAGTGTGTGCCATGCCCAGCGGGCACCTTCCAGGAGA,"Exon (Scube3-201/Scube3, exon 16 of 22)",17,28142141,28174854,32714,1,Scube3-201,23874,Scube3-201;Scube3-207;Scube3-202;Scube3-203;Scube3-206;Scube3-205;Scube3-204,Scube3;Scube3;Scube3;Scube3;Scube3;Scube3;Scube3,0;0;0;0;7141;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,7,268935,ENSMUSG00000038677,conserved gene and region,17,28165967,28166085,119,*,119,9,0.672268908,0.669793621,0.075630252,3.92E-06,CpGisland,TRUE,,
cg20557137,NA,NA,NA,NA,NA,0.094585438,Gm19311,Gm19311_Exon,14,81685886,81685935,81685934,81685935,50,+,TGGTCATTTCATCAATTCAGTTGAGTACCATTGGGATTTGGATAACACCG,"Exon (Gm41219-201/Gm41219-201, exon 1 of 2)",14,81703206,81703671,466,2,Gm19311-201,17736,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,3,100502666,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,
cg20588435,NA,NA,NA,0.218666159,NA,NA,Foxd2,Foxd2_Intergenic_downstream,4,114903590,114903639,114903590,114903591,50,+,CGCTGGATGAAAAGGAATGAAATTGAACGAAATTGAACGAAATGAAGTGA,Downstream (2-3kb),4,114906282,114908873,2592,2,Foxd2-201,5234,Foxd2-201,Foxd2,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,2,3,17301,ENSMUSG00000055210,conserved gene and region,4,114903546,114903692,147,*,147,11,0.517006803,1.1484375,0.074829932,2.27E-07,CpGisland,TRUE,ReprPC1,
cg20607831,NA,NA,-0.448556265,NA,NA,NA,Tbc1d22a,Tbc1d22a_Intron,15,86494733,86494782,86494733,86494734,50,+,CGAGGTCATGATAATATGAAGCGAAGTGGATTAAAAATAAAACCAAAGGT,"Intron (Tbc1d22a-201/Tbc1d22a, intron 12 of 12)",15,86214459,86498503,284045,1,Tbc1d22a-201,280274,Tbc1d22a-201,Tbc1d22a,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,3,223754,ENSMUSG00000051864,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg20635820,NA,NA,0.102443183,NA,NA,NA,Crebzf,Crebzf_threeUTR,7,90445452,90445501,90445452,90445453,50,+,CGGGACCAGCTGCTGGCCACATTTCCTGCTTTATTTTAAAAGGTAGTATA,3' UTR,7,90442729,90446104,3376,1,Crebzf-201,2723,Crebzf-201;Crebzf-203;Crebzf-204;Crebzf-205;Crebzf-202;Crebzf-208;Crebzf-207;Crebzf-209;Crebzf-206,Crebzf;Crebzf;Crebzf;Crebzf;Crebzf;Crebzf;Crebzf;Crebzf;Crebzf,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,6,9,233490,ENSMUSG00000051451,conserved gene and region,,,,,,,,,,,,,TRUE,PromF6,
cg20644522,NA,NA,NA,NA,NA,0.26136868,Pax6,Pax6_Intron,2,105686862,105686911,105686862,105686863,50,+,CGAAATATCTGGTACAAAGGATGCTTCTGTCACTCGCAAGAATTTGTTAT,"Intron (Pax6-206/Pax6, intron 7 of 12)",2,105668900,105697364,28465,1,Pax6-206,17962,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-209;Pax6-216,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,78,18508,ENSMUSG00000027168,conserved gene and region,2,105686550,105686863,314,*,314,18,0.585987261,0.704474635,0.057324841,7.54E-10,CpGisland,TRUE,BivProm2,
cg20665157.1,NA,NA,NA,NA,-0.039141788,NA,Cadps2,Cadps2_Intron,6,23273232,23273281,23273280,23273281,50,-,TGTCAATAGAAATTGACAAACCTCATCTCCTAAATAGTGCAGCTGAGCCG,"Intron (Cadps2-213/Cadps2, intron 28 of 29)",6,23262773,23839137,576365,2,Cadps2-213,565856,Cadps2-213;Cadps2-205;Cadps2-212;Cadps2-201;Cadps2-209;Cadps2-206;Cadps2-211;Cadps2-207;Cadps2-202;Cadps2-210,Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2;Cadps2,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,320405,ENSMUSG00000017978,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg20668096,NA,0.127221291,NA,NA,NA,NA,Lrba,Lrba_Intron,3,86551296,86551345,86551344,86551345,50,-,CCACTTCAAGTCTTCAGACCGATTCATCTGTATTCTCTTGTTATAATCCG,"Intron (Lrba-202/Lrba, intron 40 of 50)",3,86224680,86746712,522033,1,Lrba-202,326616,Lrba-202;Lrba-204;Lrba-201;Lrba-203;Lrba-205;Lrba-206;Mab21l2-201;Mab21l2-202,Lrba;Lrba;Lrba;Lrba;Lrba;Lrba;Mab21l2;Mab21l2,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,45,80877,ENSMUSG00000028080,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg20682781,NA,NA,NA,NA,-0.80627342,NA,Pax2,Pax2_Intergenic_upstream,19,44671350,44671399,44671398,44671399,50,+,GATAAATAATAACTTACAAACAGGATTAGTTGTAAAGTCACGCTCCGGCG,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-84646,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,19,44671390,44671489,100,*,100,13,0.74,1.06122449,0.13,8.74E-12,CpGisland,TRUE,BivProm2,
cg20682817,-0.042969978,NA,NA,NA,NA,NA,Bcor,Bcor_Exon,X,12136925,12136974,12136973,12136974,50,-,GGCAGTTGCAATCAGTTTCCGAAAGGTCAGCCAAGGTCCTCCGGCTCTCG,"Exon (Bcor-208/Bcor, exon 3 of 5)",20,12036743,12160355,123613,2,Bcor-201,23381,Bcor-201;Bcor-208,Bcor;Bcor,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,74,71458,ENSMUSG00000040363,conserved gene but different region,X,12136836,12137187,352,*,352,27,0.613636364,0.817337461,0.076704545,1.07E-17,CpGisland,TRUE,PromF5,
cg20696319,NA,NA,NA,NA,NA,-0.14457633,Fign,Fign_Intron,2,64079927,64079976,64079927,64079928,50,+,CGTCTCTCAGTATAGCGACAGACAGCTGCTTCCACTTTCTAATGTGCCCT,"Intron (Fign-203/Fign, intron 2 of 2)",2,63971507,64098012,126506,2,Fign-203,18036,Fign-203;Fign-201;Fign-202;Fign-204,Fign;Fign;Fign;Fign,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,84,60344,ENSMUSG00000075324,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg20718192,0.179452085,NA,NA,NA,NA,NA,Unc79,Unc79_Intron,12,102949933,102949982,102949933,102949934,50,-,CGGCAAATCAGGGGCGGGGAACTGTCAGTTGCAACCAAAGCCTGCCTGGC,"Intron (Unc79-202/Unc79, intron 1 of 48)",12,102948859,103184001,235143,1,Unc79-202,1074,Unc79-202;Unc79-208,Unc79;Unc79,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,24,217843,ENSMUSG00000021198,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg20719273,NA,NA,NA,NA,-0.039574255,NA,Prr29,Prr29_fiveUTR,11,106365599,106365648,106365599,106365600,50,-,CGCTGATGTCACAGGGTCATGAGTGAAACCTGAGGACTGGGCCAATCTTC,Promoter (<=1kb),11,106365472,106377114,11643,1,Prr29-201,127,Prr29-201,Prr29,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,2,75573,ENSMUSG00000009210,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhWk2,
cg20726505,-0.052730758,NA,NA,NA,NA,NA,Lhfpl3,Lhfpl3_Exon,5,22746219,22746268,22746219,22746220,50,-,CGCGATGCTCCCGGCTCAGGAGGCTGCCAAGCTGTACCACACCAACTATG,Promoter (<=1kb),5,22746059,23275597,529539,1,Lhfpl3-202,160,Lhfpl3-202,Lhfpl3,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,11,11,269629,ENSMUSG00000106379,conserved gene but different region,5,22745857,22746231,375,*,375,33,0.712,0.747192368,0.088,1.73E-23,CpGisland,TRUE,,Simple_repeat
cg20735499,-0.414160563,NA,NA,NA,NA,NA,Fign,Fign_Promoter,2,64099046,64099095,64099046,64099047,50,+,CGGAACATAAGGTTTAAGAAACACACACACGTTTTCTGGGGTCTCTTGTT,Promoter (1-2kb),2,63977337,64098038,120702,2,Fign-201,-1008,Fign-203;Fign-201;Fign-202;Fign-204,Fign;Fign;Fign;Fign,0;0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,12,84,60344,ENSMUSG00000075324,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg20766695,NA,NA,NA,NA,1.36849171,NA,Pax5,Pax5_fiveUTR,4,44703371,44703420,44703419,44703420,50,+,TATGCATGGATGCAAACGGGTCGTGCTTACAGTGTATTTCCATCGGGGCG,Promoter (<=1kb),4,44679454,44703413,23960,2,Pax5-216,0,Pax5-201;Pax5-202;Pax5-203;Pax5-204;Pax5-205;Pax5-207;Pax5-206;Pax5-209;Pax5-210;Pax5-212;Pax5-213;Pax5-214;Pax5-215;Pax5-208;Pax5-216;Pax5-217;Pax5-218;Pax5-219,Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,45,18507,ENSMUSG00000014030,conserved gene but different region,4,44703085,44703505,421,*,421,37,0.617577197,0.926154944,0.087885986,3.03E-26,CpGisland,TRUE,BivProm2,
cg20771405,-0.001535133,NA,NA,NA,NA,NA,Ptch1,Ptch1_Intron,13,63566290,63566339,63566290,63566291,50,-,CGAAAGAGAAAAAGGCTGGAGCTCCCGCCCCCGGGGCTGTCAGATGGCTT,"Intron (Ptch1-204/Ptch1, intron 1 of 23)",13,63508329,63573460,65132,2,Ptch1-204,7121,Ptch1-201;Ptch1-204;Ptch1-206;Ptch1-202;Ptch1-207;Ptch1-203;Ptch1-205,Ptch1;Ptch1;Ptch1;Ptch1;Ptch1;Ptch1;Ptch1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,36,19206,ENSMUSG00000021466,conserved gene and region,,,,,,,,,,,,,TRUE,TSS1,
cg20851152,NA,NA,NA,NA,0.118107737,0.169785381,Gm47084,Gm47084_Intergenic_upstream,10,91501691,91501740,91501691,91501692,50,-,CGAGGTAATTTTCCAAAGCCGATTTTCTTAGTGTTCAGCAAAGTGGAATG,Distal Intergenic,10,91448221,91448380,160,2,Gm47084-201,-53360,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,2,2,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies3,
cg20865948,-0.172969088,NA,NA,NA,NA,NA,Akap10,Akap10_Exon,11,61903962,61904011,61904010,61904011,50,+,GTTCCACTGGTCAGCACTTCAATCTGGTATTTACAGAAATGGTGACTTCG,"Exon (Akap10-202/Akap10, exon 7 of 15)",11,61871307,61930252,58946,2,Akap10-202,26241,Akap10-202;Akap10-201;Akap10-203,Akap10;Akap10;Akap10,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,2,56697,ENSMUSG00000047804,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh8,
cg20960545,0.033418551,NA,NA,NA,NA,NA,Slc44a2,Slc44a2_Exon,9,21353036,21353085,21353036,21353037,50,-,CGACCCTACTTCATGTCGCCCGAGCTGAGAGACATCCTGTTGAAGGGGAG,"Exon (Slc44a2-205/Slc44a2, exon 6 of 7)",9,21320698,21355028,34331,1,Slc44a2-210,32338,Slc44a2-210;Slc44a2-207;Slc44a2-201;Slc44a2-202;Slc44a2-209;Slc44a2-205;Slc44a2-203,Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2;Slc44a2,0;0;0;8154;6052;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,68682,ENSMUSG00000057193,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg21016222,-0.011188328,NA,NA,NA,NA,NA,Thra,Thra_Exon,11,98764351,98764400,98764351,98764352,50,+,CGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTGCTGA,"Exon (Thra-201/Thra, exon 9 of 10)",11,98741811,98769006,27196,1,Thra-201,22540,Nr1d1-201;Nr1d1-202;Thra-201;Thra-202;Thra-203,Nr1d1;Nr1d1;Thra;Thra;Thra,0;6026;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,13,18,21833,ENSMUSG00000058756,conserved gene and region,11,98764222,98764378,157,*,157,10,0.592356688,0.751196172,0.063694268,4.18E-06,CpGisland,TRUE,,
cg21032275,NA,-0.082754236,NA,NA,NA,NA,Sox12,Sox12_threeUTR,2,152394895,152394944,152394943,152394944,50,-,GGCAAGGTCGGGGCAAATACACTTTATTCAGTCCTGGCATCAGACTGGCG,3' UTR,2,152393611,152398063,4453,2,Sox12-202,3119,Sox12-202;Sox12-201,Sox12;Sox12,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,7,7,20667,ENSMUSG00000051817,mapped to different genes,,,,,,,,,,,,,TRUE,TxEx4,
cg21066109,-0.095254428,NA,NA,NA,NA,NA,Lmo4,Lmo4_Exon,3,144198443,144198492,144198491,144198492,50,+,ATATAGCAGCTTGCTGTTGATTACCAGGGAAATGAACTCGCTGTCTGGCG,"Exon (Gm43445-201/Gm43445-201, exon 1 of 1)",3,144188530,144202396,13867,2,Lmo4-203,3904,Lmo4-203;Lmo4-201;Lmo4-202;Lmo4-207;Lmo4-206;Lmo4-208;Lmo4-205;Lmo4-204,Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4;Lmo4,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,18,54,16911,ENSMUSG00000028266,conserved gene but different region,3,144198491,144198963,473,*,473,49,0.699788584,0.854672173,0.10359408,2.85E-38,CpGisland,TRUE,,
cg21076628,NA,NA,NA,-1.525767033,NA,NA,Samd4b,Samd4b_threeUTR,7,28405959,28406008,28406007,28406008,50,+,GAGTCAGGCACTTTTCGATGAGCTGGAGGTAACTGGTGATGTTCTCCTCG,3' UTR,7,28399522,28436191,36670,2,Samd4b-204,30183,Samd4b-204;Samd4b-201;Samd4b-203;Samd4b-202;Samd4b-205,Samd4b;Samd4b;Samd4b;Samd4b;Samd4b,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,9,11,233033,ENSMUSG00000109336,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg21114170,-0.684186502,NA,NA,NA,NA,NA,Hoxc5,Hoxc5_Exon,15,102981693,102981742,102981693,102981694,50,+,CGCTCATCTCTCACGACAATGAAGACCTCCTAGCGTCCAGGTTTCCGGCC,"Exon (Hoxc9-201/Hoxc9, exon 2 of 3)",15,102967443,103015676,48234,1,Hoxc5-202,14250,Hoxc5-202;Hoxc9-202;Hoxc9-201,Hoxc5;Hoxc9;Hoxc9,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,72,134,15424,ENSMUSG00000022485,conserved gene and region,15,102981651,102982178,528,*,528,70,0.696969697,1.109010712,0.132575758,6.92E-63,CpGisland,TRUE,BivProm1,
cg21118011,0.263066683,NA,1.510018477,NA,NA,NA,Phf2,Phf2_threeUTR,13,48802084,48802133,48802084,48802085,50,-,CGTCCCTCCAAACAGGACAAGTGGGAGTGGATAAGGCCTCCACCAAGCTG,3' UTR,13,48801750,48871119,69370,2,Phf2-201,68986,Phf2-201,Phf2,0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,18676,ENSMUSG00000038025,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg21126148,0.237214638,NA,NA,NA,NA,NA,Arf6,Arf6_Exon,12,69373105,69373154,69373153,69373154,50,-,CCGCATTATCAATGACCGGGAGATGAGGGACGCCATAATCCTCATCTTCG,Promoter (<=1kb),12,69372150,69373783,1634,1,Arf6-201,955,Arf6-201;Gm18113-201,Arf6;Gm18113,0;-3082,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,8,11845,ENSMUSG00000044147,conserved gene and region,12,69371680,69373175,1496,*,1496,186,0.703877005,1.010385046,0.124331551,4.87E-160,CpGisland,TRUE,,
cg21128693,0.688920995,NA,NA,NA,NA,NA,Ebf3,Ebf3_Exon,7,137199070,137199119,137199070,137199071,50,+,CGTGTGACAAAAACAGACACTTACTGCCGTAGGGAGAGTTAGCGGAGGAG,"Exon (Ebf3-204/Ebf3, exon 14 of 16)",7,137193673,137314445,120773,2,Ebf3-204,115326,Ebf3-204;Ebf3-201;Ebf3-202;Ebf3-203;Ebf3-208;Ebf3-205,Ebf3;Ebf3;Ebf3;Ebf3;Ebf3;Ebf3,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,84,13593,ENSMUSG00000010476,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg21142636,NA,NA,-0.39479967,NA,NA,NA,4931406P16Rik,4931406P16Rik_Exon,7,34285098,34285147,34285098,34285099,50,+,CGGGTATTGCTGGTGCTGCTGCACCTTCTGCTTGGACCCGCCAAGCAGGA,"Exon (4931406P16Rik-202/4931406P16Rik, exon 2 of 14)",7,34236707,34313551,76845,2,4931406P16Rik-202,28404,4931406P16Rik-202;4931406P16Rik-201;4931406P16Rik-210;4931406P16Rik-208;4931406P16Rik-203;4931406P16Rik-204,4931406P16Rik;4931406P16Rik;4931406P16Rik;4931406P16Rik;4931406P16Rik;4931406P16Rik,0;0;0;0;28398;20365,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,8,233103,ENSMUSG00000066571,conserved gene and region,7,34285022,34285154,133,*,133,9,0.69924812,0.561444653,0.067669173,9.59E-06,CpGisland,TRUE,TxEnh4,
cg21142942,NA,NA,0.435495041,NA,NA,NA,Brpf3,Brpf3_threeUTR,17,28831337,28831386,28831385,28831386,50,-,GAAGACCGCGGAGACCTGGAGCCCTTGGAGCTGGTGTGGGCCAAGTGCCG,3' UTR,17,28801090,28839949,38860,1,Brpf3-201,30247,Brpf3-201;Brpf3-216;Brpf3-217;Brpf3-219;Brpf3-210;Brpf3-218;Brpf3-212;Brpf3-209;Brpf3-207;Brpf3-205;Brpf3-213;Brpf3-214;Brpf3-215;Brpf3-206;Brpf3-203,Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3;Brpf3,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,7,7,268936,ENSMUSG00000063952,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg21153937,-0.412695652,NA,NA,NA,NA,NA,Ttbk2,Ttbk2_fiveUTR,2,120850598,120850647,120850598,120850599,50,+,CGCTATCTTCAGGTTTGCCTGAGAGGGCGAGTTACCGGGAAAGGAGCATC,Promoter (<=1kb),2,120732816,120850604,117789,2,Ttbk2-201,0,Cdan1-207;Ttbk2-202;Ttbk2-203;Ttbk2-201;Ttbk2-206;Ttbk2-204;Ttbk2-205,Cdan1;Ttbk2;Ttbk2;Ttbk2;Ttbk2;Ttbk2;Ttbk2,0;0;0;0;-208;-234;-163,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,1,140810,ENSMUSG00000090100,conserved gene but different region,2,120849916,120850788,873,*,873,87,0.682703322,0.856432462,0.099656357,6.93E-66,CpGisland,TRUE,TSS1,
cg21154081,NA,NA,NA,NA,-0.243648968,NA,Fgf12,Fgf12_Intron,16,28447224,28447273,28447224,28447225,50,+,CGCAATCCTACGTGATTGAGGTTTGGATGAGAAATTCTCAGAGGCAGAGC,"Intron (Fgf12-205/Fgf12, intron 1 of 4)",16,28162354,28753068,590715,2,Fgf12-205,305795,Fgf12-201;Fgf12-205;Fgf12-202;Fgf12-204,Fgf12;Fgf12;Fgf12;Fgf12,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,5,14167,ENSMUSG00000022523,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg21246299,-0.261971473,NA,NA,NA,NA,NA,Nfix,Nfix_Intron,8,84712625,84712674,84712673,84712674,50,+,TGGGTGTTACATCATGTCTGGTTGCTCCTGGAAACCAGACGGGTCAGACG,"Intron (Nfix-204/Nfix, intron 10 of 10)",8,84704712,84773396,68685,2,Nfix-204,60722,Nfix-207;Nfix-208;Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-206;Nfix-205,Nfix;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix;Nfix,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,23,49,18032,ENSMUSG00000001911,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg21249921,-0.166977828,NA,NA,NA,NA,NA,Ssbp2,Ssbp2_Promoter,13,91460796,91460845,91460796,91460797,50,-,CGGCGGAGAGAACAGCCAGTTGTTTAAAATCCTTCTAGAGCAGTTTCTAA,Promoter (<=1kb),13,91460283,91688866,228584,1,Ssbp2-209,513,Ssbp2-209;Ssbp2-201;Ssbp2-202;Ssbp2-206;Ssbp2-204;Ssbp2-208;Ssbp2-210;Ssbp2-207,Ssbp2;Ssbp2;Ssbp2;Ssbp2;Ssbp2;Ssbp2;Ssbp2;Ssbp2,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,3,18,66970,ENSMUSG00000003992,conserved gene and region,13,91460385,91460800,416,*,416,49,0.745192308,0.854460094,0.117788462,2.77E-41,CpGisland,TRUE,TSS1,Low_complexity
cg21278764,NA,-0.003415859,-0.222150182,-0.594007546,NA,NA,Utp11,Utp11_Intron,4,124686382,124686431,124686382,124686383,50,+,CGGCACTAAGCAAGCAGTTGCCAGTTGTACTAAAATTACTACCAACTTAA,"Intron (Utp11-201/Utp11, intron 1 of 7)",4,124678160,124693600,15441,2,Utp11-201,7169,Utp11-201;Utp11-202,Utp11;Utp11,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,67205,ENSMUSG00000028907,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg21279088,-0.153118482,NA,NA,NA,NA,NA,Hbp1,Hbp1_fiveUTR,12,31950182,31950231,31950230,31950231,50,-,ACTTTCCTACTTACCAAACCCGTCGCCATTACCAAGTCTTTCAAGCTTCG,Promoter (<=1kb),12,31929383,31950223,20841,2,Hbp1-201,0,Hbp1-202;Hbp1-201;Hbp1-204;Hbp1-208;Hbp1-206;Hbp1-205;Hbp1-203,Hbp1;Hbp1;Hbp1;Hbp1;Hbp1;Hbp1;Hbp1,0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,3,73389,ENSMUSG00000002996,conserved gene and region,12,31950045,31950364,320,*,320,31,0.6125,1.087719298,0.096875,1.94E-23,CpGisland,TRUE,PromF4,
cg21371906,-0.024381578,NA,-1.291457596,NA,NA,NA,Pknox2,Pknox2_Intron,9,37013735,37013784,37013783,37013784,50,+,ATGCTAATTGTTCTGAATGAACAGCTCCAGCTGGAAAAGCAGGCAGGCCG,"Intron (Pknox2-207/Pknox2, intron 1 of 10)",9,36890982,37083309,192328,2,Pknox2-207,69525,Pknox2-207;Pknox2-201;Pknox2-202;Pknox2-206;Pknox2-204;Pknox2-205;Pknox2-208;Pknox2-210;Pknox2-209;Pknox2-212;Pknox2-211,Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2;Pknox2,0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,31,47,208076,ENSMUSG00000035934,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC7,
cg21376378,NA,NA,NA,NA,0.238597326,NA,Pou3f1,Pou3f1_threeUTR,4,124659645,124659694,124659693,124659694,50,-,TATTTATTCGTGGAGCCTCTCGGCTCCTGGGGTCCTTCTAACTCCGCCCG,3' UTR,4,124656807,124660655,3849,1,Pou3f1-201,2838,Pou3f1-201,Pou3f1,0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,6,85,18991,ENSMUSG00000090125,conserved gene and region,4,124659224,124659760,537,*,537,47,0.648044693,0.8390625,0.087523277,4.32E-33,CpGisland,TRUE,BivProm2,
cg21390110,-0.199366534,NA,-0.694445557,NA,NA,NA,Ddx3x,Ddx3x_Exon,X,13287316,13287365,13287316,13287317,50,-,CGCTGGTGTGACAAATCAGATGAAGATGATTGGTCAAAACCACTCCCACC,"Exon (Ddx3x-201/Ddx3x, exon 5 of 17)",20,13280970,13294052,13083,1,Ddx3x-201,6346,Ddx3x-201;Ddx3x-205;Ddx3x-204;Ddx3x-202;Ddx3x-203,Ddx3x;Ddx3x;Ddx3x;Ddx3x;Ddx3x,0;0;0;0;-420,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,6,13205,ENSMUSG00000000787,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg21414531,NA,-0.012778978,NA,NA,NA,NA,Nrip1,Nrip1_Intron,16,76320111,76320160,76320111,76320112,50,-,CGGGTGCCAATTACAGCAACCTTTCAACCCTTTAGGTACTGGAAACTACA,"Intron (Nrip1-202/Nrip1, intron 3 of 3)",16,76287400,76373827,86428,2,Nrip1-202,53667,Nrip1-202;Nrip1-201;Nrip1-208;Nrip1-204;Nrip1-207,Nrip1;Nrip1;Nrip1;Nrip1;Nrip1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,8,268903,ENSMUSG00000048490,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh7,
cg21419618,0.057960521,NA,0.123800468,NA,NA,NA,Msra,Msra_Intron,14,64233693,64233742,64233693,64233694,50,-,CGTCAATAAATGTCTGCAATCATATTCTTGAGCTCCTGTGTGATTTCAAG,"Intron (Msra-201/Msra, intron 9 of 10)",14,64122625,64455903,333279,2,Msra-201,222161,Msra-201;Msra-205;Msra-204,Msra;Msra;Msra,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,4,110265,ENSMUSG00000054733,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA6,
cg21421053,NA,NA,NA,NA,-0.101415509,0.014173738,Mapkap1,Mapkap1_Intron,2,34556812,34556861,34556812,34556813,50,-,CGGTTCAATTTAGTTACGATTTTTTGCCATTAGGCTGGGGCTGAATGATG,"Intron (Mapkap1-204/Mapkap1, intron 6 of 10)",2,34406862,34623475,216614,1,Mapkap1-204,149950,Mapkap1-204;Mapkap1-202;Mapkap1-201;Mapkap1-209;Mapkap1-203,Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,50,59,227743,ENSMUSG00000038696,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg21423577,NA,NA,NA,NA,0.343391464,NA,Uncx,Uncx_Intergenic_downstream,5,139550084,139550133,139550084,139550085,50,-,CGTAAAATGCCGGTTATTTTATCTAAGGTGAACAATTTGTCTGGCAGCGA,Downstream (1-2kb),5,139543898,139545268,1371,1,Uncx-202,6235,Uncx-201;Uncx-202,Uncx;Uncx,0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,59,88,22255,ENSMUSG00000029546,conserved gene and region,5,139550084,139550187,104,*,104,11,0.509615385,1.62962963,0.105769231,5.75E-09,CpGisland,TRUE,ReprPC1,
cg21473019,0.269348831,NA,NA,NA,NA,NA,Ilf3,Ilf3_Exon,9,21393679,21393728,21393727,21393728,50,-,GTGCCTTGTCTTCTTATTCCATCCATGAATAGAAACGCTATCAGTCAACG,"Exon (Ilf3-201/Ilf3, exon 6 of 20)",9,21367871,21405360,37490,1,Ilf3-201,25808,Ilf3-201;Ilf3-203;Ilf3-206;Ilf3-213;Ilf3-210;Ilf3-202;Ilf3-207;Ilf3-204;Ilf3-208;Ilf3-209;Ilf3-216;Ilf3-211,Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3;Ilf3,0;0;0;0;25676;0;25147;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,11,16201,ENSMUSG00000032178,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx1,
cg21476366,NA,NA,NA,0.145193464,NA,NA,C1ql3,C1ql3_Exon,2,13010261,13010310,13010309,13010310,50,+,TGGTTGTTTTTGCAGAGATCAGCCCACATGCTGGTGCCGTCCCCTCCGCG,"Exon (C1ql3-201/C1ql3, exon 1 of 2)",2,13003457,13011806,8350,2,C1ql3-201,1496,C1ql3-201,C1ql3,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,9,227580,ENSMUSG00000049630,conserved gene and region,2,13010298,13010656,359,*,359,37,0.679665738,0.892494793,0.103064067,6.15E-29,CpGisland,TRUE,,
cg21509426,NA,-0.166911033,NA,NA,NA,NA,Rhobtb1,Rhobtb1_threeUTR,10,69266236,69266285,69266284,69266285,50,+,AATCATGTGAAAAGCATGTGGTATCCAGAAATCAAGCACTTTTGCCCTCG,3' UTR,10,69208552,69289900,81349,1,Rhobtb1-205,57684,Rhobtb1-205;Rhobtb1-201;Rhobtb1-207;Rhobtb1-210;Rhobtb1-203;Rhobtb1-202;Rhobtb1-211;Rhobtb1-212,Rhobtb1;Rhobtb1;Rhobtb1;Rhobtb1;Rhobtb1;Rhobtb1;Rhobtb1;Rhobtb1,0;0;0;0;53152;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,1,3,69288,ENSMUSG00000019944,conserved gene but different region,10,69266284,69266389,106,*,106,10,0.660377358,0.871710526,0.094339623,1.11E-07,CpGisland,TRUE,,
cg21510166,NA,NA,NA,NA,1.200122724,NA,Pax2,Pax2_Intron,19,44797139,44797188,44797139,44797140,50,-,CGGATAAGGCAGAGATGGTAAAAGGAAAAATTTAGGCCAGGCACAGCCCA,"Intron (Pax2-203/Pax2, intron 5 of 9)",19,44756045,44837851,81807,1,Pax2-203,41094,Pax2-203;Pax2-201;Pax2-202,Pax2;Pax2;Pax2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,166,18504,ENSMUSG00000004231,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC5,
cg21519567,NA,NA,NA,NA,-0.207756581,NA,Foxg1,Foxg1_threeUTR,12,49386045,49386094,49386045,49386046,50,+,CGTTTGTTCAGTCTCTAGGGTTGTTTATTATTCTAACAAGGTGTGGAGTG,3' UTR,12,49382883,49386855,3973,1,Foxg1-204,3162,Foxg1-202;Foxg1-203;Foxg1-204;Foxg1-201;Gm43517-201,Foxg1;Foxg1;Foxg1;Foxg1;Gm43517,0;3245;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,4,27,15228,ENSMUSG00000020950,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg21526212,-0.006734727,NA,NA,NA,NA,NA,Ptch1,Ptch1_Intron,13,63566354,63566403,63566354,63566355,50,+,CGATTGGCTCGCGGAGGGCAGAAATTACTCAGCAAACATGACTATTATTA,"Intron (Ptch1-204/Ptch1, intron 1 of 23)",13,63508329,63573460,65132,2,Ptch1-204,7057,Ptch1-201;Ptch1-204;Ptch1-206;Ptch1-202;Ptch1-207;Ptch1-203;Ptch1-205,Ptch1;Ptch1;Ptch1;Ptch1;Ptch1;Ptch1;Ptch1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,36,19206,ENSMUSG00000021466,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg21527341,NA,NA,-0.017566853,NA,NA,NA,Usp21,Usp21_Exon,1,171284695,171284744,171284695,171284696,50,-,CGCTCCATGAGGAGCTTCAGGAACTCTTGGGCATCCTGCTGGCTACAGCC,"Exon (Usp21-201/Usp21, exon 6 of 13)",1,171281945,171287991,6047,2,Usp21-201,3247,Ppox-207;Ppox-201;Ppox-206;Ppox-208;Ppox-202;Ppox-204;Ppox-205;Ppox-203;Ufc1-201;Ufc1-203;Ufc1-204;Ufc1-202;Ufc1-205;Usp21-201;Usp21-202;Usp21-208;Usp21-210;Usp21-203;Usp21-207;Usp21-205;Usp21-204;Usp21-209;Usp21-206;Usp21-211;Usp21-212,Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ufc1;Ufc1;Ufc1;Ufc1;Ufc1;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21,-3509;-3509;-3509;-3935;-4868;-4173;-3509;-3576;10280;5696;10197;10243;10196;0;0;-1789;0;0;-1528;0;0;0;0;0;2062,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,30941,ENSMUSG00000053483,conserved gene and region,1,171284614,171284696,83,*,83,8,0.662650602,0.902173913,0.096385542,2.91E-06,CpGisland,TRUE,TxEx3,
cg21550097,NA,NA,NA,-0.008076541,NA,NA,Skida1,Skida1_fiveUTR,2,18048969,18049018,18049017,18049018,50,+,CCCAAAGTAAATAATACAGTCGGTATATAAATCTTTCCATTAAACTATCG,Promoter (<=1kb),2,18044083,18049051,4969,2,Skida1-202,33,Skida1-205;Skida1-202;Skida1-201;Skida1-203;Skida1-204,Skida1;Skida1;Skida1;Skida1;Skida1,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,8,31,72668,ENSMUSG00000054074,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg21564446,-0.048691449,NA,NA,NA,NA,NA,Rsf1,Rsf1_Exon,7,97581018,97581067,97581018,97581019,50,-,CGCTGGTCTATTATTGGTGTTCGCAAGTGGTGCTCCTTCCACATAAGGCC,"Exon (Rsf1-207/Rsf1, exon 1 of 1)",7,97579889,97582973,3085,1,Rsf1-207,1129,Aamdc-206;Aamdc-202;Aamdc-204;Aamdc-213;Aamdc-208;Aamdc-203;Aamdc-209;Aamdc-207;Aamdc-212;Aamdc-210;Aamdc-205;Aamdc-211;Aamdc-215;Rsf1-207;Rsf1-206;Rsf1-201;Rsf1-203,Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Aamdc;Rsf1;Rsf1;Rsf1;Rsf1,-1521;-1539;-1620;-1522;-1532;-1521;-1577;-1536;-1576;-1544;-1599;-1636;-2791;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,6,233532,ENSMUSG00000035623,conserved gene but different region,7,97581018,97581232,215,*,215,13,0.572093023,0.747326203,0.060465116,1.55E-07,CpGisland,TRUE,PromF4,
cg21599130,NA,-0.59063464,NA,NA,NA,NA,Gm8707,Gm8707_Intron,9,41736108,41736157,41736156,41736157,50,-,AAGACCTGGCATTCCAGCTGTCTGCGTCTAATCTCCAGTGTCAGCTCTCG,"Intron (Gm35835-202/Gm35835-202, intron 2 of 4)",9,41654303,41655282,980,1,Gm8707-201,81854,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,12,667566,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg21623348,0.516028571,0.009762307,NA,NA,NA,NA,Gm17304,Gm17304_Exon,5,106574941,106574990,106574941,106574942,50,+,CGACGTGGAAACCCTTCCACCAAAATGAGCTGTGATATCCTTTTGATGGC,"Exon (Gm29464-201/Gm29464-201, exon 1 of 1)",5,106609098,106609201,104,1,Gm17304-201,-34108,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,35,NA,NA,mapped to different genes,5,106574318,106574945,628,*,628,82,0.75477707,0.925521208,0.130573248,6.09E-73,CpGisland,TRUE,TSS2,
cg21630674,NA,NA,NA,NA,0.738288469,NA,Gtdc1,Gtdc1_Intron,2,44632741,44632790,44632789,44632790,50,+,CTTTGATGTCCCCACAAGAGTTTTTTGCCCGAAGGCTTTACCAATGCTCG,"Intron (Gtdc1-203/Gtdc1, intron 6 of 10)",2,44564412,44861622,297211,2,Gtdc1-203,228832,Gtdc1-203;Gtdc1-201;Gtdc1-205;Gtdc1-210;Gtdc1-204;Gtdc1-211,Gtdc1;Gtdc1;Gtdc1;Gtdc1;Gtdc1;Gtdc1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,25,43,227835,ENSMUSG00000036890,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA12,
cg21634324,-0.702958233,NA,NA,NA,NA,NA,Runx1t1,Runx1t1_fiveUTR,4,13784927,13784976,13784975,13784976,50,-,CAAGTGCAATCCGGAGTGTCAGCTCTCCATCTGTCTCTGCCTGGCAGGCG,5' UTR,4,13743436,13893649,150214,1,Runx1t1-201,41491,Runx1t1-201;Runx1t1-206;Runx1t1-204;Runx1t1-203;Runx1t1-202,Runx1t1;Runx1t1;Runx1t1;Runx1t1;Runx1t1,0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,4,24,12395,ENSMUSG00000006586,conserved gene and region,4,13784938,13785132,195,*,195,13,0.646153846,0.682736332,0.066666667,4.94E-08,CpGisland,TRUE,BivProm4,
cg21658772,0.376787566,0.231805343,NA,NA,NA,NA,Fam120a,Fam120a_Exon,13,48910212,48910261,48910212,48910213,50,-,CGAGGTACCGAGGAAAACAAACAATGGATTGTTACAGTACATACATTCTG,"Exon (Fam120a-201/Fam120a, exon 10 of 18)",13,48879219,48968017,88799,2,Fam120a-201,57756,Fam120a-201,Fam120a,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,8,218236,ENSMUSG00000038014,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg21664672,NA,-0.032835801,NA,NA,NA,NA,Nnmt,Nnmt_Intergenic_upstream,9,48649627,48649676,48649627,48649628,50,+,CGGCGATTAAATGTTGTTTTAAAGAGGGAGTGCTCACTGCCCTCCCATCT,Distal Intergenic,9,48591877,48605153,13277,2,Nnmt-202,-44474,Zbtb16-201,Zbtb16,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,2,2,18113,ENSMUSG00000032271,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg21667796,NA,-0.342083768,NA,NA,NA,NA,Macrod1,Macrod1_Intron,19,7165177,7165226,7165225,7165226,50,+,TTGGAGGCTGCTCATGCCCCCCTTGAAGTCGTTTTAAAAATAAAACCTCG,"Intron (Macrod1-201/Macrod1, intron 3 of 10)",19,7056810,7198057,141248,1,Macrod1-201,108367,Macrod1-201,Macrod1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,11,11,107227,ENSMUSG00000036278,conserved gene and region,19,7165206,7166284,1079,*,1079,149,0.772937905,0.927382326,0.138090825,2.45E-136,CpGisland,TRUE,BivProm1,
cg21752606,0.13771024,NA,NA,NA,NA,NA,Morc4,Morc4_Intron,X,139835424,139835473,139835424,139835425,50,+,CGGCCAACCTTACTGCACCCTTCAGCGTCCGGAGCTGGGCAACCATGTCC,"Intron (Morc4-201/Morc4, intron 13 of 15)",20,139821632,139871654,50023,2,Morc4-201,36181,Morc4-201;Morc4-204;Morc4-202;Morc4-210;Morc4-208,Morc4;Morc4;Morc4;Morc4;Morc4,0;0;0;0;19465,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,7,75746,ENSMUSG00000031434,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh5,
cg21809124,0.003326013,NA,NA,NA,NA,NA,Ivns1abp,Ivns1abp_threeUTR,1,151355232,151355281,151355280,151355281,50,-,GACACGTAAAGAAGCAGCAGTCCTGCCCCAGTTCTCCTAAGAAAAATCCG,3' UTR,1,151344477,151364422,19946,1,Ivns1abp-201,10755,Ivns1abp-201;Ivns1abp-203;Ivns1abp-202;Ivns1abp-204,Ivns1abp;Ivns1abp;Ivns1abp;Ivns1abp,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,3,117198,ENSMUSG00000023150,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg21818536,-0.034236673,NA,NA,NA,NA,NA,Tanc2,Tanc2_Exon,11,105914013,105914062,105914061,105914062,50,-,AACTTTTTGTTTTCTCCTTTCTTTGAAGGTTGTCAGACGTTACCGAGTCG,"Exon (Tanc2-204/Tanc2, exon 8 of 12)",11,105589991,105929304,339314,1,Tanc2-202,324022,Tanc2-202;Tanc2-204;Tanc2-201;Tanc2-205,Tanc2;Tanc2;Tanc2;Tanc2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,20,77097,ENSMUSG00000053580,conserved gene and region,,,,,,,,,,,,,TRUE,Tx5,
cg21830760,0.947822985,NA,NA,NA,NA,NA,Gm20721,Gm20721_threeUTR,2,174336753,174336802,174336753,174336754,50,-,CGAAGAGGACCCGCAGGCTGCAAGGAGCAACAGCGATGGGTAGGCACATT,3' UTR,2,174330319,174346712,16394,2,Gm20721-201,9910,Gm20721-201;Gnas-222;Gnas-211;Gnas-215;Gnas-214;Gnas-201;Gnas-209;Gnas-220;Gnas-223;Gnas-224;Gnas-203;Gnas-212;Gnas-221;Gnas-217;Gnas-202;Gnas-218;Gnas-207;Gnas-226;Gnas-208;Gnas-206;Gnas-205;Gnas-216,Gm20721;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas;Gnas,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,9,10,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg21841556,NA,-0.063801263,NA,-0.138144168,NA,NA,Pdik1l,Pdik1l_fiveUTR,4,134284496,134284545,134284496,134284497,50,+,CGTATTAGATCGTACTTTGGCTGGCTACTCACCATCTTCAAGGTCGAGGT,5' UTR,4,134275002,134287239,12238,2,Pdik1l-203,2694,Pdik1l-203;Pdik1l-201;Pdik1l-202;Pdik1l-206;Pdik1l-204;Pdik1l-205,Pdik1l;Pdik1l;Pdik1l;Pdik1l;Pdik1l;Pdik1l,0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,8,230809,ENSMUSG00000050890,conserved gene but different region,4,134284376,134284541,166,*,166,11,0.493975904,1.129251701,0.06626506,7.69E-07,CpGisland,TRUE,TxEnh4,
cg21852513,NA,NA,NA,0.220957266,NA,NA,Nhlh2,Nhlh2_Intergenic_downstream,3,102023463,102023512,102023463,102023464,50,+,CGAATGGAACCAAATTACAGGCCCGTCTGTCACCTCCTCTGGGAGAAGGT,Distal Intergenic,3,102010155,102014506,4352,1,Nhlh2-203,13308,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,5,18072,ENSMUSG00000048540,conserved gene and region,3,102023357,102023691,335,*,335,30,0.680597015,0.806128178,0.089552239,1.24E-21,CpGisland,TRUE,BivProm1,
cg21907062,NA,NA,0.659304092,NA,NA,NA,Ola1,Ola1_Intron,2,73099153,73099202,73099201,73099202,50,+,AATTAAAGTTATCCTGGACAAAAACCTCATCTGTAATGACTAGCTAACCG,"Intron (Ola1-201/Ola1, intron 9 of 10)",2,73092801,73214447,121647,2,Ola1-201,115245,Ola1-201;Ola1-206;Ola1-203,Ola1;Ola1;Ola1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,18,19,67059,ENSMUSG00000027108,conserved gene but different region,,,,,,,,,,,,,TRUE,Tx8,
cg21913180,0.141483493,NA,NA,NA,NA,NA,Zfp618,Zfp618_Exon,4,63132883,63132932,63132931,63132932,50,-,TGCTCAGCCTGTGCCTTGAACTCGGTGGTGCAGAGCGTGCTGAGCAAGCG,"Exon (Zfp618-203/Zfp618, exon 15 of 15)",4,62965573,63139708,174136,1,Zfp618-203,167310,Zfp618-203;Zfp618-202,Zfp618;Zfp618,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,12,72701,ENSMUSG00000028358,conserved gene and region,4,63132931,63133130,200,*,200,14,0.625,0.717213115,0.07,6.89E-09,CpGisland,TRUE,TxEx3,
cg21929632,NA,NA,NA,NA,1.907723417,NA,Fus,Fus_Exon,7,127974362,127974411,127974410,127974411,50,+,GAAGCTTCATGTCCTTTCTTCTAACTTGTCTTCTCCAGCGGAAGTGACCG,"Exon (Fus-203/Fus, exon 7 of 15)",7,127967457,127985701,18245,1,Fus-203,6905,Fus-203;Fus-201;Fus-208;Fus-213;Fus-206;Fus-204;Fus-205;Fus-210;Fus-211;Fus-215;Fus-207;Fus-214;Fus-216,Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus;Fus,0;0;6871;0;0;0;0;0;0;-564;-1273;-2903;-3721,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,3,233908,ENSMUSG00000030795,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg21988123,NA,NA,NA,NA,-0.998025211,NA,Nkx2-2,Nkx2-2_Exon,2,147188259,147188308,147188259,147188260,50,-,CGGACCCGGGCAAACACAAATACAAACCGATTGCTAAGCTGCGGACAATG,"Exon (6430503K07Rik-201/6430503K07Rik-201, exon 3 of 3)",2,147186305,147194243,7939,2,Nkx2-2-202,5935,Nkx2-2-203;Nkx2-2-201;Nkx2-2-202;Nkx2-2-204,Nkx2-2;Nkx2-2;Nkx2-2;Nkx2-2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,30,18088,ENSMUSG00000027434,conserved gene but different region,2,147188041,147188404,364,*,364,26,0.585164835,0.836633663,0.071428571,2.81E-16,CpGisland,TRUE,BivProm2,
cg22025998,0.194157394,NA,NA,1.06588475,NA,NA,Zadh2,Zadh2_threeUTR,18,84096824,84096873,84096824,84096825,50,+,CGGTAAATAGCTGCCAAATTATGGATCATGCCGAAGTGTCACAACTGCAC,3' UTR,18,84088063,84097528,9466,1,Zadh2-201,8761,Zadh2-201;Zadh2-202,Zadh2;Zadh2,0;8153,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,2,225791,ENSMUSG00000049090,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh8,
cg22042302,NA,NA,NA,NA,-0.111674597,NA,Gab1,Gab1_Intron,8,80798370,80798419,80798370,80798371,50,+,CGGAAATAACATGGTAACGATATTTTGAGAGGTTCCTGGAATCAAAACAC,"Intron (Gab1-202/Gab1, intron 2 of 10)",8,80764438,80880519,116082,2,Gab1-202,82100,Gab1-202;Gab1-201;Gab1-203,Gab1;Gab1;Gab1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,1,14388,ENSMUSG00000031714,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA6,
cg22047293,-0.067537811,NA,NA,NA,NA,NA,Blcap,Blcap_Exon,2,157561235,157561284,157561283,157561284,50,-,ACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCATTGCG,"Exon (Nnat-208/Nnat, exon 2 of 3)",2,157556362,157566337,9976,2,Blcap-202,5053,Blcap-202;Blcap-201;Blcap-205;Blcap-204;Blcap-203;Nnat-205;Nnat-208;Nnat-202;Nnat-210;Nnat-207;Nnat-209;Nnat-206;Nnat-201;Nnat-204;Nnat-203,Blcap;Blcap;Blcap;Blcap;Blcap;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat;Nnat,0;0;0;0;5047;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,9,53619,ENSMUSG00000067787,conserved gene and region,,,,,,,,,,,,,TRUE,Dse1,
cg22053627,NA,NA,NA,NA,-1.621517933,NA,Sall3,Sall3_fiveUTR,18,80986676,80986725,80986676,80986677,50,+,CGCATGGGGCTGAGCAATTAGGCTGGTGAATAATGCATGGCCATTAGCGG,Promoter (<=1kb),18,80966376,80986771,20396,2,Sall3-201,46,Sall3-201;Sall3-203,Sall3;Sall3,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,5,10,20689,ENSMUSG00000024565,conserved gene but different region,18,80985515,80986677,1163,*,1163,120,0.682717111,0.88568473,0.103181427,1.42E-92,CpGisland,TRUE,BivProm3,
cg22057106,-0.676443942,NA,NA,NA,NA,NA,Zbtb20,Zbtb20_Intron,16,43478362,43478411,43478362,43478363,50,-,CGACAGTGTTGATCAAAACTAATTTAGGTAACTTAGAGTTGCCAAAACAC,"Intron (Zbtb20-211/Zbtb20, intron 4 of 4)",16,42907542,43569781,662240,1,Zbtb20-211,570820,Zbtb20-211;Zbtb20-217;Zbtb20-204;Zbtb20-215;Zbtb20-201;Zbtb20-203;Zbtb20-214;Zbtb20-213;Zbtb20-219;Zbtb20-216,Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,64,98,56490,ENSMUSG00000022708,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA6,
cg22102759,NA,NA,0.065394681,NA,NA,NA,Mid1,Mid1_Exon,X,169927624,169927673,169927624,169927625,50,+,CGATCATCAGGTGGCAGCTTTGAGTGAGCGCTATGACAAATTGAAGGTTA,"Exon (Mid1-204/Mid1, exon 2 of 10)",20,169685199,169990795,305597,1,Mid1-206,242425,Mid1-206;Mid1-204;Mid1-201;Mid1-205;Mid1-202;Mid1-214;Mid1-215;Mid1-211,Mid1;Mid1;Mid1;Mid1;Mid1;Mid1;Mid1;Mid1,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,8,17318,ENSMUSG00000035299,conserved gene and region,X,169927461,169927683,223,*,223,13,0.533632287,0.835928489,0.058295964,2.36E-07,CpGisland,TRUE,TxEnh5,
cg22122198,NA,NA,NA,0.022210455,NA,NA,BC052040,BC052040_Intron,2,115726979,115727028,115726979,115726980,50,+,CGAGTGGTAATAAGGACAATAGGGGCCCTGGCTAATTTGACATGGACAGC,"Intron (BC052040-203/BC052040, intron 10 of 10)",2,115581716,115778768,197053,1,BC052040-203,145263,BC052040-203;BC052040-201,BC052040;BC052040,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,37,49,399568,ENSMUSG00000040282,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg22123640,-0.107536595,NA,NA,NA,NA,NA,Sim1,Sim1_Intron,10,50901891,50901940,50901939,50901940,50,+,ATCTACTTCGCCTCATTTGGTTACTAATTGGTTTCTTGTTTTATAAATCG,"Intron (Sim1-201/Sim1, intron 1 of 10)",10,50895651,50989152,93502,1,Sim1-201,6240,Sim1-202;Sim1-201,Sim1;Sim1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,8,20464,ENSMUSG00000019913,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg22149945,0.142314038,NA,NA,NA,NA,NA,Mif4gd,Mif4gd_Exon,11,115609550,115609599,115609550,115609551,50,+,CGTAGCACATGCGTCCTGCTTCCTTGCTGAACACACAGTCCTGCAGAGAA,"Exon (Mif4gd-203/Mif4gd, exon 2 of 5)",11,115607918,115612503,4586,2,Mif4gd-203,2904,Mif4gd-203;Mif4gd-204;Mif4gd-206;Mif4gd-201;Mif4gd-202;Mif4gd-205;Mif4gd-209;Mif4gd-210;Mif4gd-208;Mif4gd-207;Mrps7-201;Mrps7-202;Slc25a19-201;Slc25a19-212,Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mif4gd;Mrps7;Mrps7;Slc25a19;Slc25a19,0;0;0;0;0;0;0;0;0;3321;5625;4683;18546;18696,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,69674,ENSMUSG00000020743,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg22188876,NA,NA,NA,NA,-0.800028711,NA,Scube3,Scube3_Exon,17,28165996,28166045,28165996,28165997,50,-,CGCAGGGAACGTATTACCACGGCCAGACGGAGCAGTGTGTGCCATGCCCA,"Exon (Scube3-201/Scube3, exon 16 of 22)",17,28142141,28174854,32714,1,Scube3-201,23855,Scube3-201;Scube3-207;Scube3-202;Scube3-203;Scube3-206;Scube3-205;Scube3-204,Scube3;Scube3;Scube3;Scube3;Scube3;Scube3;Scube3,0;0;0;0;7122;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,7,268935,ENSMUSG00000038677,conserved gene and region,17,28165967,28166085,119,*,119,9,0.672268908,0.669793621,0.075630252,3.92E-06,CpGisland,TRUE,,
cg22237674,NA,NA,NA,0.003931558,NA,NA,Eif5,Eif5_fiveUTR,12,111539481,111539530,111539481,111539482,50,-,CGAAAATTTTTTCATGTCAGAGACCGAGAACTCTTGCAGTCGTTTATGTC,5' UTR,12,111538016,111546752,8737,1,Eif5-202,1465,Eif5-202;Eif5-214;Eif5-209;Eif5-204;Eif5-212;Eif5-213;Eif5-207;Eif5-210;Eif5-201;Eif5-203;Eif5-208;Eif5-211;Eif5-215;Eif5-217;Eif5-216;Eif5-205;Eif5-206,Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5;Eif5,0;0;1265;0;0;0;0;0;0;0;0;0;0;0;0;-2695;-3301,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,3,217869,ENSMUSG00000021282,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg22305268,NA,NA,NA,NA,-0.231218884,NA,Hes1,Hes1_Intergenic_downstream,16,30068811,30068860,30068811,30068812,50,-,CGGGAGAGATCAATCTTTGAAGCTTTCCTAACAAAGATAAAGCCAACGAT,Downstream (1-2kb),16,30066338,30067319,982,1,Hes1-204,2522,Hes1-202;Hes1-201;Hes1-203;Hes1-204,Hes1;Hes1;Hes1;Hes1,0;0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,6,20,15205,ENSMUSG00000022528,conserved gene and region,16,30068642,30068812,171,*,171,15,0.719298246,0.730769231,0.087719298,6.69E-11,CpGisland,TRUE,PromF1,
cg22351850,-0.632774835,NA,NA,NA,NA,NA,Ccnt2,Ccnt2_Exon,1,127774240,127774289,127774240,127774241,50,-,CGTGGAGCTTCTTCTCGCTGGTTCTTTACTCGGGAACAGCTGGAGAACAC,Promoter (<=1kb),1,127774164,127793589,19426,1,Ccnt2-203,76,Ccnt2-203;Ccnt2-204;Ccnt2-206;Ccnt2-205;Ccnt2-202;Ccnt2-201,Ccnt2;Ccnt2;Ccnt2;Ccnt2;Ccnt2;Ccnt2,0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,9,11,72949,ENSMUSG00000026349,conserved gene and region,1,127773875,127774860,986,*,986,93,0.643002028,0.927282104,0.094320487,5.41E-68,CpGisland,TRUE,PromF4,
cg22365906,NA,-0.263556867,NA,NA,NA,NA,Anks1b,Anks1b_fiveUTR,10,90576713,90576762,90576713,90576714,50,-,CGTGCATTGCTCATTGTGGAGTACTCCAACAATCACATAGAACGCAGACC,Promoter (<=1kb),10,90576718,90971664,394947,1,Anks1b-216,0,Anks1b-233;Anks1b-222;Anks1b-203;Anks1b-214;Anks1b-215;Anks1b-208;Anks1b-210;Anks1b-221;Anks1b-219;Anks1b-213;Anks1b-216;Anks1b-224;Anks1b-206;Anks1b-207;Anks1b-209;Anks1b-231;Anks1b-218;Anks1b-217;Anks1b-201,Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b;Anks1b,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,9,14,77531,ENSMUSG00000058589,conserved gene but different region,,,,,,,,,,,,,TRUE,EnhA19,
cg22416332,-1.16997841,-0.295356845,-1.508574299,NA,NA,NA,Xpo7,Xpo7_Exon,14,70682386,70682435,70682386,70682387,50,+,CGCATGTCTGTCAGGTTGGACTGATTGTTAATACCCAAAAATGAAAAGTG,"Exon (Xpo7-202/Xpo7, exon 18 of 28)",14,70654246,70766628,112383,2,Xpo7-202,84193,Xpo7-202;Xpo7-201;Xpo7-206;Xpo7-203;Xpo7-204;Xpo7-205,Xpo7;Xpo7;Xpo7;Xpo7;Xpo7;Xpo7,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,13,65246,ENSMUSG00000022100,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg22446589,NA,NA,NA,NA,-0.243697101,NA,Pax5,Pax5_Exon,4,44703357,44703406,44703357,44703358,50,-,CGCCGCCTACTTACTATGCATGGATGCAAACGGGTCGTGCTTACAGTGTA,"Exon (Pax5-208/Pax5, exon 1 of 5)",4,44524757,44710487,185731,2,Pax5-201,7081,Pax5-201;Pax5-202;Pax5-203;Pax5-204;Pax5-205;Pax5-207;Pax5-206;Pax5-209;Pax5-210;Pax5-212;Pax5-213;Pax5-214;Pax5-215;Pax5-208;Pax5-216;Pax5-217;Pax5-218;Pax5-219,Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5;Pax5,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,45,18507,ENSMUSG00000014030,conserved gene but different region,4,44703085,44703505,421,*,421,37,0.617577197,0.926154944,0.087885986,3.03E-26,CpGisland,TRUE,BivProm2,
cg22470076,0.043404525,NA,NA,NA,NA,NA,Evx2,Evx2_Promoter,2,74659932,74659981,74659980,74659981,50,-,ATTACGCTCTCAGTTTGCTAGGTTGCCCCTTAGGTCCTAATCATGCAGCG,Promoter (<=1kb),2,74652991,74659557,6567,2,Evx2-201,-424,Evx2-201;Evx2-202,Evx2;Evx2,0;-513,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,35,14029,ENSMUSG00000001815,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg22548438,NA,NA,NA,NA,0.298619397,NA,En1,En1_Promoter,1,120600137,120600186,120600185,120600186,50,+,AAGGGCCGCCGTATTATTCAGCTGGCTTTATCAGCTGGCTGGAAATTACG,Promoter (2-3kb),1,120602418,120607992,5575,1,En1-201,-2232,En1-201,En1,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,23,36,13798,ENSMUSG00000058665,conserved gene and region,1,120600143,120600235,93,*,93,12,0.602150538,1.425287356,0.129032258,7.57E-11,CpGisland,TRUE,ReprPC1,
cg22610366,NA,NA,NA,NA,0.196506883,NA,Sox14,Sox14_Exon,9,99874986,99875035,99874986,99874987,50,-,CGAATAAGGGTCTATGCCAGTCTTGGTCATGCCTGGGAAGAGGATGTAGG,"Exon (Sox14-201/Sox14, exon 1 of 1)",9,99874106,99876170,2065,2,Sox14-201,1135,Sox14-201;Sox14-202,Sox14;Sox14,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,18,20669,ENSMUSG00000053747,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg22669570,NA,NA,0.234704264,NA,NA,NA,Cdh7,Cdh7_threeUTR,1,110048870,110048919,110048870,110048871,50,+,CGAAGGGGCAAGTTCCATTTTCATTATTGATGAGAACACTGGGGATATTC,3' UTR,1,109982710,110140157,157448,1,Cdh7-202,66160,Cdh7-202;Cdh7-204;Cdh7-209;Cdh7-201,Cdh7;Cdh7;Cdh7;Cdh7,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,1,1,241201,ENSMUSG00000026312,conserved gene but different region,,,,,,,,,,,,,TRUE,Quies2,
cg22670250,0.004085784,NA,NA,NA,NA,NA,Nr2f2,Nr2f2_Intron,7,70329584,70329633,70329584,70329585,50,-,CGAATGGCAAGTCTTTATGGAAAGTGTTTTGCATAATTACATACCAAAGC,"Intron (Gm29683-202/Gm29683-202, intron 1 of 3)",7,70353074,70355237,2164,2,Nr2f2-203,25653,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,20,69,11819,ENSMUSG00000030551,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg22749775,0.182293264,NA,0.462500457,NA,NA,NA,Neurog2,Neurog2_Promoter,3,127625903,127625952,127625951,127625952,50,-,CACTCTTGTAAATATGAAAGATGCTAATCATATGACATATCACGTCTCCG,Promoter (7-8kb),3,127633135,127635631,2497,1,Neurog2-201,-7232,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,14,11924,ENSMUSG00000027967,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg22881140,NA,NA,NA,NA,-1.569598155,NA,Hand2,Hand2_Intergenic_downstream,8,57328604,57328653,57328652,57328653,50,+,TGTCCGTCTTTATCTCCGCTATTAGGGACATCTGGGAGTGATTAGTGCCG,Distal Intergenic,8,57320983,57324633,3651,1,Hand2-201,7621,Hand2-201,Hand2,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,9,15111,ENSMUSG00000038193,mapped to different genes,8,57328608,57328867,260,*,260,26,0.626923077,1.022383545,0.1,4.14E-20,CpGisland,TRUE,BivProm1,
cg22882174,0.287350423,NA,NA,NA,NA,NA,Fgfr1,Fgfr1_threeUTR,8,25563439,25563488,25563439,25563440,50,-,CGGGGAGTATGTGTGTAAGGTTTCCAATTATATTGGTGAAGCTAACCAGT,3' UTR,8,25518759,25575718,56960,1,Fgfr1-201,44680,Fgfr1-201;Fgfr1-214;Fgfr1-215;Fgfr1-203;Fgfr1-202;Fgfr1-213;Fgfr1-208;Fgfr1-209;Fgfr1-206;Fgfr1-216;Fgfr1-204;Fgfr1-219,Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1;Fgfr1,0;0;0;0;0;0;0;0;0;-2512;-3362;-3378,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,7,8,14182,ENSMUSG00000031565,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx3,
cg22892466,NA,NA,NA,NA,-0.004928958,NA,Gm48316,Gm48316_Intergenic_upstream,13,94703567,94703616,94703615,94703616,50,+,TGTTTAATCCGTGGAAATGGTGCTGGTCCTATGTAAACAAGCCAAGTGCG,Distal Intergenic,13,94752270,94752593,324,1,Gm48316-201,-48654,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,36,42,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm2,
cg22897826,NA,NA,-0.754320726,NA,-0.899082037,NA,Hes1,Hes1_Intergenic_downstream,16,30068809,30068858,30068857,30068858,50,+,GGCGGGAGAGATCAATCTTTGAAGCTTTCCTAACAAAGATAAAGCCAACG,Distal Intergenic,16,30066338,30067319,982,1,Hes1-204,2471,Hes1-202;Hes1-201;Hes1-203;Hes1-204,Hes1;Hes1;Hes1;Hes1,0;0;0;0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,6,20,15205,ENSMUSG00000022528,conserved gene and region,,,,,,,,,,,,,TRUE,PromF1,
cg22942788,NA,NA,-0.219879124,NA,NA,NA,Pax6,Pax6_Intron,2,105690001,105690050,105690049,105690050,50,-,CTTCACTGAAAAGTCTGTTGACTGGGCTTCTTGTAACACAATGTGGCCCG,"Intron (Pax6-206/Pax6, intron 7 of 12)",2,105668900,105697364,28465,1,Pax6-206,21101,Pax6-206;Pax6-207;Pax6-210;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-216;Pax6-218,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-2433,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,22,78,18508,ENSMUSG00000027168,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg22978368,NA,-0.4858169,NA,NA,NA,NA,Pex14,Pex14_Intron,4,148973075,148973124,148973075,148973076,50,+,CGTTAAGAACATTTTATTGCCCCCTGGTTTTCATTATTAATGAAAAGGGA,"Intron (Gm17029-202/Gm17029-202, intron 2 of 2)",4,148960535,149099876,139342,2,Pex14-201,126752,Pex14-201;Pex14-202,Pex14;Pex14,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,41,48,56273,ENSMUSG00000028975,conserved gene but different region,,,,,,,,,,,,,TRUE,TxWk2,
cg22997759,NA,NA,NA,NA,0.06340247,NA,Pax2,Pax2_fiveUTR,19,44760807,44760856,44760807,44760808,50,-,CGGACCCTGACTAATGGCCGGTCCCTGCTGTGTGTGGGGTGTTGTGTTTT,5' UTR,19,44756045,44837851,81807,1,Pax2-203,4762,Pax2-203;Pax2-201;Pax2-202,Pax2;Pax2;Pax2,0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,6,166,18504,ENSMUSG00000004231,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg23009891,NA,NA,NA,NA,0.406619806,NA,Hoxd3,Hoxd3_Exon,2,74753160,74753209,74753208,74753209,50,-,AGAGGTTAGTTCTATTAAGAGTTCATCAATCACCCGGTGTGCACTTTTCG,"Exon (Haglr-203/Haglr-203, exon 1 of 4)",2,74745722,74748442,2721,1,Hoxd3-206,7487,Hoxd3-203;Hoxd3-206,Hoxd3;Hoxd3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,24,15434,ENSMUSG00000079277,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg23087015,1.044031364,0.895667099,NA,1.423701054,1.364716306,1.646873751,Celf6,Celf6_Exon,9,59578626,59578675,59578626,59578627,50,-,CGGCCTCCACAAAGGTGCGCGGGGTCAGCCCAGCCCAGCCCAGCCCCAAT,Promoter (<=1kb),9,59577917,59607292,29376,1,Celf6-207,709,Celf6-207;Celf6-203;Celf6-205;Celf6-201,Celf6;Celf6;Celf6;Celf6,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,6,8,76183,ENSMUSG00000032297,conserved gene but different region,9,59577836,59578646,811,*,811,79,0.700369914,0.796878109,0.097410604,4.77E-59,CpGisland,TRUE,BivProm3,
cg23090824,NA,NA,NA,-0.432116676,NA,NA,Pde7b,Pde7b_fiveUTR,10,20724747,20724796,20724747,20724748,50,+,CGGTGCTGCTTGTTCATGAAGACTTGTGCTGCAGAATCCAGCAACTTCAT,Promoter (<=1kb),10,20398004,20725078,327075,2,Pde7b-201,282,Pde7b-201;Pde7b-206;Pde7b-207;Pde7b-203,Pde7b;Pde7b;Pde7b;Pde7b,0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,4,29863,ENSMUSG00000019990,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg23204033,NA,NA,NA,NA,1.768858525,1.313558668,U2af1,U2af1_Exon,17,31651687,31651736,31651687,31651688,50,-,CGGTAAATGTTCAAGAGGGCAATGGTCTGAAATACAAAACGCAACAACTT,"Exon (U2af1-201/U2af1, exon 3 of 8)",17,31647081,31658769,11689,2,U2af1-202,7033,U2af1-202;U2af1-201;U2af1-208;U2af1-209;U2af1-206;U2af1-207;U2af1-205;U2af1-203;U2af1-204,U2af1;U2af1;U2af1;U2af1;U2af1;U2af1;U2af1;U2af1;U2af1,0;0;0;0;-2375;0;0;0;6967,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,108121,ENSMUSG00000061613,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx1,
cg23207462,-0.06777121,NA,NA,NA,NA,NA,Meis1,Meis1_fiveUTR,11,19018585,19018634,19018633,19018634,50,-,AACTACCAAATCTCATGGCTTTCTGCCACTCCAGCTGTCAATCACAGGCG,Promoter (<=1kb),11,18879817,19018985,139169,2,Meis1-206,351,Meis1-206;Meis1-202;Meis1-209;Meis1-201;Meis1-208;Meis1-207;Meis1-204;Meis1-205,Meis1;Meis1;Meis1;Meis1;Meis1;Meis1;Meis1;Meis1,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,88,17268,ENSMUSG00000020160,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg23262134,NA,NA,NA,NA,-0.179366174,NA,Ovol2,Ovol2_fiveUTR,2,144332120,144332169,144332168,144332169,50,+,GAAAAGGCACCAGGAAACTTGGGACTGAGCATGCGCCCTGCAACATAACG,Promoter (<=1kb),2,144305175,144332146,26972,2,Ovol2-201,0,Ovol2-202;Ovol2-201;Ovol2-203,Ovol2;Ovol2;Ovol2,-425;0;-794,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,5,107586,ENSMUSG00000037279,conserved gene but different region,2,144332153,144332212,60,*,60,8,0.65,1.304347826,0.133333333,2.21E-07,CpGisland,TRUE,BivProm1,
cg23266866,0.004965207,0.356463249,0.153153649,0.687679857,NA,NA,Mrtfb,Mrtfb_Exon,16,13449533,13449582,13449533,13449534,50,-,CGGGGTTTTGAGGGCGAGATGAGTTTATGTTTTATCCAACTGGCCCTCAA,"Exon (Mir193b-201/Mir193b-201, exon 1 of 1)",16,13358421,13417529,59109,1,Mrtfb-204,91161,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,5,239719,ENSMUSG00000009569,mapped to different genes,,,,,,,,,,,,,TRUE,PromF5,
cg23298936,0.08734191,NA,0.134029047,NA,NA,NA,Casz1,Casz1_Intron,4,148882443,148882492,148882443,148882444,50,-,CGAAGCTAAAATATAAATGACTCCCTGTCAAGAAGCAGCTTTTGTTTGTT,"Intron (Casz1-201/Casz1, intron 2 of 15)",4,148804429,148945129,140701,1,Casz1-201,78014,Casz1-201;Casz1-202,Casz1;Casz1,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,EnhWk3,
cg23333310,NA,NA,NA,0.475443,NA,NA,Clint1,Clint1_Intron,11,45886658,45886707,45886658,45886659,50,-,CGAGTGCAGAATCCAAGACGTGGGGCCCTAGAGTATTAATTAGTGAAGAC,"Intron (Clint1-201/Clint1, intron 4 of 11)",11,45851964,45910625,58662,1,Clint1-201,34694,Clint1-201;Clint1-202;Clint1-203,Clint1;Clint1;Clint1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,7,216705,ENSMUSG00000006169,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg23337318,NA,NA,0.070775428,NA,NA,NA,Nfia,Nfia_Intron,4,97844974,97845023,97844974,97844975,50,+,CGTGGCAGCCTGCAGCACTGTGTATGGTTTAAATTAAACCTTTTTTTGGA,"Intron (Nfia-208/Nfia, intron 2 of 3)",4,97772734,98000466,227733,1,Nfia-208,72240,Nfia-208;Nfia-202;Nfia-203;Nfia-205;Nfia-201;Nfia-204,Nfia;Nfia;Nfia;Nfia;Nfia;Nfia,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,24,44,18027,ENSMUSG00000028565,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg23342013,NA,NA,NA,NA,0.251256302,0.637640386,Klf7,Klf7_Exon,1,64042347,64042396,64042395,64042396,50,+,CCTGTGTGTTTCCTGTAGTGCCTCGTGAGCTCATCGCTTCGTGCAAAACG,"Exon (Klf7-202/Klf7, exon 3 of 4)",1,64029447,64121491,92045,2,Klf7-202,79095,Klf7-202;Klf7-201,Klf7;Klf7,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,8,21,93691,ENSMUSG00000025959,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg23357093,NA,NA,NA,NA,0.002787499,NA,Ppp2r2b,Ppp2r2b_fiveUTR,18,42898768,42898817,42898768,42898769,50,+,CGCAGGAAACTGTTGTTGATTTTGCGGGTATCAATGTCCTCCTCCATTGA,Promoter (<=1kb),18,42758468,42898815,140348,2,Ppp2r2b-206,0,Ppp2r2b-204;Ppp2r2b-202;Ppp2r2b-201;Ppp2r2b-203;Ppp2r2b-208;Ppp2r2b-207;Ppp2r2b-205;Ppp2r2b-206,Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b;Ppp2r2b,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,9,15,72930,ENSMUSG00000024500,conserved gene and region,18,42898666,42898793,128,*,128,11,0.6015625,0.951351351,0.0859375,5.43E-08,CpGisland,TRUE,BivProm1,
cg23366861,NA,NA,NA,NA,0.857281721,NA,Tcf20,Tcf20_Intron,15,82963749,82963798,82963797,82963798,50,-,TTTACTGGCTGCAATTCCCGGCGCCCCTCGATGGCACTTAAGAGAGACCG,"Intron (Tcf20-203/Tcf20, intron 1 of 1)",15,82857130,82987872,130743,2,Tcf20-203,24074,Tcf20-204;Tcf20-203,Tcf20;Tcf20,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,13,21411,ENSMUSG00000041852,mapped to different genes,15,82963194,82964023,830,*,830,133,0.824096386,0.949281095,0.160240964,2.63E-132,CpGisland,TRUE,Dse1,Low_complexity
cg23394448,NA,-0.15766307,NA,NA,NA,NA,Hoxb9,Hoxb9_Exon,11,96271547,96271596,96271595,96271596,50,-,CATTTCTGGGACGCTTAGCAGCTATTATGTCGACTCGATCATAAGTCACG,Promoter (<=1kb),11,96271457,96276595,5139,1,Hoxb9-201,90,Hoxb9-201;Hoxb9-202,Hoxb9;Hoxb9,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,9,22,15417,ENSMUSG00000020875,mapped to different genes,11,96271433,96272051,619,*,619,70,0.675282714,0.992327951,0.113085622,2.33E-57,CpGisland,TRUE,BivProm1,
cg23394633,0.063848917,NA,NA,NA,NA,NA,Gm13750,Gm13750_Intron,1,64191798,64191847,64191846,64191847,50,+,TTAAGGGACTTCAGGCCTGTGAATAAATGATGACCCAGTGGTTAGGGGCG,"Intron (Gm28981-201/Gm28981-201, intron 1 of 1)",1,64150201,64150665,465,1,Gm13750-201,41597,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,2,241074,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA12,
cg23419136,-0.037680895,NA,NA,NA,NA,NA,Lrp1,Lrp1_Exon,10,127553528,127553577,127553528,127553529,50,-,CGGCCGATCAGTGAATGGTCACCCCAGTCTGTCCAGTACAGGTACCTGGC,"Exon (Lrp1-201/Lrp1, exon 60 of 89)",10,127538161,127621148,82988,2,Lrp1-201,67571,Lrp1-201;Lrp1-205,Lrp1;Lrp1,0;-3611,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,8,16971,ENSMUSG00000040249,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg23419437,NA,NA,NA,NA,NA,-0.235154737,Pax2,Pax2_Intron,19,44820409,44820458,44820457,44820458,50,-,CGACATTTCAATCAAGCGAGGAGTAACAAAAGCAGAACCATTAACATTCG,"Intron (Pax2-203/Pax2, intron 7 of 9)",19,44756045,44837851,81807,1,Pax2-203,64364,Pax2-203;Pax2-201;Pax2-202,Pax2;Pax2;Pax2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,35,166,18504,ENSMUSG00000004231,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC3,
cg23440250,NA,NA,NA,NA,-0.29625944,NA,Msx1,Msx1_Exon,5,37893784,37893833,37893832,37893833,50,+,TTACTTTGATGGGATACATGTGCTCGGCTTTATCTCCGGCCCTTTCTCCG,"Exon (Gm20052-201/Gm20052-201, exon 1 of 2)",5,37820485,37824583,4099,2,Msx1-201,-69201,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,14,17701,ENSMUSG00000048450,mapped to different genes,5,37893820,37893998,179,*,179,16,0.553072626,1.171849427,0.089385475,9.87E-12,CpGisland,TRUE,PromF1,
cg23443820,0.807614948,NA,NA,NA,NA,NA,Pgrmc2,Pgrmc2_Exon,3,41082612,41082661,41082660,41082661,50,+,CTGCCTTTGGTCACGTCGAAGACTTTCCCATTGACCGCGAGCAGGATGCG,Promoter (<=1kb),3,41066326,41083046,16721,2,Pgrmc2-201,385,Pgrmc2-201,Pgrmc2,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,70804,ENSMUSG00000049940,conserved gene and region,3,41082421,41083754,1334,*,1334,150,0.706896552,0.903622619,0.112443778,9.67E-122,CpGisland,TRUE,,
cg23446200,NA,0.030061395,NA,NA,NA,NA,Gm11819,Gm11819_Intergenic_upstream,4,13408509,13408558,13408509,13408510,50,+,CGAAAGAGTCTGACACAGATGGTGTAATTAGAAAATGCGAAGTGCGAGTG,Distal Intergenic,4,13444770,13445141,372,1,Gm11819-201,-36212,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,19,22,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Acet4,
cg23465841,NA,NA,-0.12955144,NA,NA,NA,Pde6d,Pde6d_threeUTR,1,86546650,86546699,86546698,86546699,50,+,AGAATACCTTCTAGGCATTGCCCTTTGAAGTAAACTTTTTGTTCCAGGCG,3' UTR,1,86542994,86582547,39554,2,Pde6d-201,35848,Pde6d-201;Pde6d-204;Pde6d-202;Pde6d-205;Pde6d-203,Pde6d;Pde6d;Pde6d;Pde6d;Pde6d,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,2,18582,ENSMUSG00000026239,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg23534990,0.933658647,NA,NA,NA,NA,NA,Inava,Inava_Exon,1,136234028,136234077,136234028,136234029,50,+,CGGAGGTATTTCATTTAACTTCGGCATTTGCAGCATCCCAAATGTTAAAG,Promoter (<=1kb),1,136213531,136234264,20734,2,Inava-201,187,Inava-201;Inava-203;Inava-202;Inava-204;Inava-206,Inava;Inava;Inava;Inava;Inava,0;-3739;-3718;0;-4009,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,67313,ENSMUSG00000041605,conserved gene and region,1,136233826,136234050,225,*,225,21,0.688888889,0.930851064,0.093333333,1.14E-15,CpGisland,TRUE,PromF5,
cg23541754,NA,NA,NA,NA,0.25406608,NA,Pax6,Pax6_Exon,2,105684981,105685030,105684981,105684982,50,-,CGACTCCAGAAGTTGTAAGCAAAATAGCCCAGTATAAGCGGGAGTGCCCG,"Exon (Pax6-206/Pax6, exon 6 of 13)",2,105668900,105697364,28465,1,Pax6-206,16081,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208;Pax6-202;Pax6-205;Pax6-225;Pax6-204;Pax6-201;Pax6-203;Pax6-224;Pax6-219;Pax6-221;Pax6-213;Pax6-211;Pax6-222;Pax6-212;Pax6-215;Pax6-223;Pax6-209;Pax6-216,Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,Exon,31,78,18508,ENSMUSG00000027168,conserved gene but different region,,,,,,,,,,,,,TRUE,ReprPC1,
cg23552337,NA,NA,NA,-0.010185686,NA,NA,Bcl11a,Bcl11a_Exon,11,24087341,24087390,24087341,24087342,50,-,CGAGCTGCTCGTTTAAAAGACAAAACACAGTGTCTGTCAAGCAAGAATTA,"Exon (Bcl11a-205/Bcl11a, exon 2 of 2)",11,24078056,24173194,95139,1,Bcl11a-201,9285,Bcl11a-201;Bcl11a-203;Bcl11a-205;Bcl11a-202;Bcl11a-204,Bcl11a;Bcl11a;Bcl11a;Bcl11a;Bcl11a,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,51,98,14025,ENSMUSG00000000861,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh6,
cg23564550,-0.243582829,NA,NA,NA,NA,NA,Hes1,Hes1_Exon,16,30066325,30066374,30066325,30066326,50,+,CGTGGTTGTGAGAGGCATTCAGCTACATTTTACTGCCTTGGCTCACTCTT,Promoter (<=1kb),16,30066338,30067319,982,1,Hes1-204,0,Hes1-202;Hes1-201;Hes1-203;Hes1-204,Hes1;Hes1;Hes1;Hes1,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,20,15205,ENSMUSG00000022528,conserved gene and region,16,30066223,30066328,106,*,106,15,0.698113208,1.169117647,0.141509434,3.45E-14,CpGisland,TRUE,PromF5,
cg23627331,NA,NA,0.259305622,NA,0.543523173,0.376680552,Fap,Fap_Intron,2,62517934,62517983,62517934,62517935,50,+,CGGATACATCTAGGGTTGGCATTTCAAGGAATATGTGTGGGTTTTTCGTC,"Intron (Fap-202/Fap, intron 19 of 25)",2,62500943,62574075,73133,2,Fap-202,56092,Fap-202;Fap-205;Fap-201;Fap-208;Fap-209,Fap;Fap;Fap;Fap;Fap,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,8,14089,ENSMUSG00000000392,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg23627350,0.21980612,NA,NA,NA,NA,NA,Lamc1,Lamc1_Exon,1,153241972,153242021,153241972,153241973,50,-,CGGATGTCACACTGCCCATTGGTGGAGCCCAAGGCATGGCAGTCACACCT,"Exon (Lamc1-201/Lamc1, exon 16 of 28)",1,153218922,153332786,113865,2,Lamc1-201,90765,Lamc1-201;Lamc1-205,Lamc1;Lamc1,0;-2646,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,5,6,226519,ENSMUSG00000026478,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg23632380,-0.318147209,NA,NA,NA,NA,NA,Meis1,Meis1_fiveUTR,11,19018851,19018900,19018899,19018900,50,-,AAAATGTCTGTCTGAGTTTGTCTTAAAGGAGCCACGATCGATGCTGCCCG,Promoter (<=1kb),11,18879817,19018985,139169,2,Meis1-206,85,Meis1-206;Meis1-202;Meis1-209;Meis1-201;Meis1-208;Meis1-207;Meis1-204;Meis1-205,Meis1;Meis1;Meis1;Meis1;Meis1;Meis1;Meis1;Meis1,0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,88,17268,ENSMUSG00000020160,conserved gene and region,11,19018885,19019116,232,*,232,18,0.590517241,0.911392405,0.077586207,4.67E-12,CpGisland,TRUE,PromF5,
cg23647082,-0.568708284,NA,NA,NA,NA,NA,Zc3h3,Zc3h3_Intron,15,75835199,75835248,75835247,75835248,50,+,TTAGCCCCCTTATCTGCTGAGCAATATAGTGGCAGGGCTGACCTCTTTCG,"Intron (Zc3h3-201/Zc3h3, intron 3 of 11)",15,75754430,75841915,87486,2,Zc3h3-201,6667,Zc3h3-201,Zc3h3,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,18,18,223642,ENSMUSG00000075600,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh2,
cg23662675,NA,0.124361921,NA,NA,NA,NA,Zmynd8,Zmynd8_fiveUTR,2,165884801,165884850,165884801,165884802,50,-,CGATTATCTTTGTGAGGCTCGGGTGAGCAAGAGCCATCCTGTGCATAGAA,Promoter (<=1kb),2,165785519,165884874,99356,2,Zmynd8-202,24,Zmynd8-221;Zmynd8-203;Zmynd8-220;Zmynd8-201;Zmynd8-218;Zmynd8-202;Zmynd8-204;Zmynd8-209;Zmynd8-213;Zmynd8-216;Zmynd8-207;Zmynd8-214,Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8;Zmynd8,0;0;0;0;0;0;0;0;-4899;-591;-562;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,12,228880,ENSMUSG00000039671,conserved gene and region,2,165884700,165884821,122,*,122,10,0.56557377,1.026936027,0.081967213,4.23E-07,CpGisland,TRUE,PromF2,
cg23665306,NA,NA,0.233992991,NA,NA,NA,Ank2,Ank2_Exon,3,127077540,127077589,127077588,127077589,50,-,GAACTTTGACAACTTCTGCTTGTCCAGCCAAAGATGCAATGTGAAGAGCG,"Exon (Ank2-208/Ank2, exon 5 of 46)",3,126921614,127409059,487446,2,Ank2-208,331470,Ank2-208;Ank2-207;Ank2-218;Ank2-220;Ank2-203;Ank2-214;Ank2-221;Ank2-217;Ank2-213;Ank2-205;Ank2-228;Ank2-223,Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2;Ank2,0;0;0;0;0;0;0;0;0;84649;47273;331365,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,109676,ENSMUSG00000032826,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg23687194,1.262657778,NA,NA,NA,3.491462399,NA,Id4,Id4_Intron,13,48262886,48262935,48262886,48262887,50,+,CGGTGGCGCCAGTTAGTCTGCAGCGAGAAGGTTCACACACCCCCTCTATT,"Intron (Id4-201/Id4, intron 2 of 2)",13,48261228,48266026,4799,1,Id4-201,1658,Id4-201,Id4,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,9,15904,ENSMUSG00000021379,conserved gene and region,,,,,,,,,,,,,TRUE,PromF5,
cg23699324,NA,NA,NA,NA,0.896886524,NA,Ctnna2,Ctnna2_fiveUTR,6,77979396,77979445,77979444,77979445,50,+,GAGGATGCTCTGCCCGGGACTCACCTCTGTGGGTCGGTGGGAGTTTCTCG,Promoter (<=1kb),6,76881637,77979699,1098063,2,Ctnna2-204,254,Ctnna2-204;Ctnna2-205;Ctnna2-202;Ctnna2-201;Ctnna2-206;Ctnna2-203,Ctnna2;Ctnna2;Ctnna2;Ctnna2;Ctnna2;Ctnna2,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,4,24,12386,ENSMUSG00000063063,mapped to different genes,6,77979410,77979902,493,*,493,54,0.726166329,0.831288056,0.109533469,1.51E-43,CpGisland,TRUE,TSS2,
cg23734659,NA,NA,NA,NA,1.683991358,NA,Gnao1,Gnao1_Exon,8,93811378,93811427,93811378,93811379,50,-,CGGAGCAAGGCGATTGAGAAAAACCTCAAAGAGGATGGCATCAGCGCCGC,"Exon (Gnao1-202/Gnao1, exon 1 of 2)",8,93809966,93950403,140438,1,Gnao1-206,1412,Gnao1-206;Gnao1-202;Gnao1-201;Gnao1-203;Gnao1-207,Gnao1;Gnao1;Gnao1;Gnao1;Gnao1,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,13,14681,ENSMUSG00000031748,conserved gene and region,8,93811274,93811435,162,*,162,16,0.648148148,0.965722802,0.098765432,1.97E-12,CpGisland,TRUE,BivProm1,
cg23773983,-0.050320993,NA,NA,NA,NA,NA,Atxn1,Atxn1_Promoter,13,45965100,45965149,45965148,45965149,50,-,TGTAAATGTGTAATAGAAGCCAAATATGGAGCAGTTGGCTGCCGCCGCCG,Promoter (<=1kb),13,45792329,45965008,172680,2,Atxn1-204,-141,Atxn1-201;Atxn1-202;Atxn1-203;Atxn1-204;Atxn1-206,Atxn1;Atxn1;Atxn1;Atxn1;Atxn1,0;0;0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,3,10,20238,ENSMUSG00000046876,mapped to different genes,,,,,,,,,,,,,TRUE,TSS1,
cg23815914,0.011893507,NA,NA,NA,NA,NA,Cnot6l,Cnot6l_threeUTR,5,96094260,96094309,96094308,96094309,50,-,TAGCTGCCGGGTAGCGTATTTATCACATAACACATTGTAACACATAACCG,3' UTR,5,96070333,96161990,91658,2,Cnot6l-210,67681,Cnot6l-210;Cnot6l-201;Cnot6l-202;Cnot6l-203,Cnot6l;Cnot6l;Cnot6l;Cnot6l,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,11,13,231464,ENSMUSG00000034724,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg23952337,NA,-0.063500958,NA,NA,NA,NA,Satb1,Satb1_Intron,17,51791357,51791406,51791405,51791406,50,-,AACTATAAAGACAGATGTCAAAAACTGTTTACACAGAGCAATCAGGAGCG,"Intron (Satb1-208/Satb1, intron 5 of 10)",17,51736187,51832672,96486,2,Satb1-208,41266,Satb1-208;Satb1-213;Satb1-204;Satb1-214;Satb1-203;Satb1-211;Satb1-207,Satb1;Satb1;Satb1;Satb1;Satb1;Satb1;Satb1,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,28,36,20230,ENSMUSG00000023927,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk6,
cg23985931,1.223673164,NA,NA,NA,NA,NA,Pou4f1,Pou4f1_Exon,14,104459330,104459379,104459378,104459379,50,-,AAAGCTCAATAGCTGCCTGAAAATATTGCATTTTATATCACCAAAGGGCG,"Exon (D130079A08Rik-202/D130079A08Rik-202, exon 1 of 5)",14,104463973,104465365,1393,2,Pou4f1-202,6035,Pou4f1-201;Pou4f1-202,Pou4f1;Pou4f1,0;5986,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,31,18996,ENSMUSG00000048349,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg24024857,-0.592728696,NA,NA,NA,NA,NA,Nr6a1,Nr6a1_Intron,2,38925332,38925381,38925380,38925381,50,-,GCGCTAATTGCTCCAGGGCGCTTTCCAAGTTCAAAAGTTCACCTTTTACG,"Intron (Nr6a1-202/Nr6a1, intron 2 of 11)",2,38723370,38927688,204319,2,Nr6a1-202,2307,Nr6a1-202;Nr6a1-201;Nr6a1-208,Nr6a1;Nr6a1;Nr6a1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,12,14536,ENSMUSG00000063972,conserved gene and region,2,38925258,38925381,124,*,124,11,0.596774194,0.999267399,0.088709677,3.88E-08,CpGisland,TRUE,BivProm1,
cg24034621,NA,NA,0.013251844,NA,NA,NA,Ube2z,Ube2z_Exon,11,96060957,96061006,96061005,96061006,50,+,TTTCCCATTGCGGTAGAAGTTGGGGTTAAACCTCACTGTGTTATTGCCCG,"Exon (Ube2z-201/Ube2z, exon 3 of 7)",11,96047432,96065388,17957,2,Ube2z-201,4382,Ube2z-201,Ube2z,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,6,6,268470,ENSMUSG00000014349,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg24076820,NA,NA,NA,0.14562957,NA,NA,Tenm2,Tenm2_Exon,11,36078378,36078427,36078426,36078427,50,-,TCTCCAGGAATGATGTGGGTGCTATCCTTGCCTGCCAAGAGCTTGATACG,"Exon (Tenm2-202/Tenm2, exon 16 of 31)",11,36006656,37235882,1229227,2,Tenm2-202,1157455,Tenm2-202;Tenm2-208;Tenm2-201,Tenm2;Tenm2;Tenm2,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,21,84,23964,ENSMUSG00000049336,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk2,
cg24111804,NA,NA,0.116905027,NA,NA,NA,Prpf39,Prpf39_threeUTR,12,65043830,65043879,65043830,65043831,50,-,CGTGGGGATCAGAACATTGCCATGTTCTATCCAACCTCCACCCAAATGGT,3' UTR,12,65036333,65063386,27054,1,Prpf39-201,7497,Prpf39-201;Prpf39-205;Prpf39-202;Prpf39-207;Prpf39-210;Prpf39-209;Prpf39-203;Prpf39-208;Prpf39-206,Prpf39;Prpf39;Prpf39;Prpf39;Prpf39;Prpf39;Prpf39;Prpf39;Prpf39,0;0;0;0;0;0;0;-113;-4437,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,7,328110,ENSMUSG00000035597,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg24119607,NA,-0.322496313,-0.080596114,NA,NA,NA,Cxxc5,Cxxc5_Intron,18,35848035,35848084,35848035,35848036,50,-,CGCCTCCCAGACCTCTGGGGCCATGAATCATTTATGAGGCAAAAATGAAA,"Intron (Gm50371-201/Gm50371-201, intron 4 of 4)",18,35829397,35859002,29606,1,Cxxc5-202,18638,Cxxc5-202;Cxxc5-201;Cxxc5-206;Cxxc5-203,Cxxc5;Cxxc5;Cxxc5;Cxxc5,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,49,67393,ENSMUSG00000046668,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg24124633,0.213413199,NA,1.119635287,NA,NA,NA,Phox2b,Phox2b_Promoter,5,67100393,67100442,67100393,67100394,50,+,CGCCGTGTGGTGTAAACAAACCCTGGATATTTTATATGAATTAAATGTGT,Promoter (1-2kb),5,67094399,67099301,4903,2,Phox2b-201,-1092,Phox2b-201;Phox2b-202,Phox2b;Phox2b,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,28,18935,ENSMUSG00000012520,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg24151358,NA,NA,NA,NA,0.511624487,NA,Pou4f3,Pou4f3_Promoter,18,42394788,42394837,42394836,42394837,50,+,TCTAAGGCACATTTTTTGACAGGCACTAGCTTCATGTTTTTTTCATGTCG,Promoter (<=1kb),18,42394539,42397249,2711,1,Pou4f3-201,249,Pou4f3-201;Pou4f3-202,Pou4f3;Pou4f3,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,4,17,18998,ENSMUSG00000024497,conserved gene and region,18,42394836,42394895,60,*,60,8,0.683333333,1.379310345,0.133333333,2.21E-07,CpGisland,TRUE,ReprPC1,
cg24181435,NA,0.175752531,NA,NA,NA,NA,Cadps,Cadps_Intron,14,12389278,12389327,12389326,12389327,50,+,TGGTAGTTTTTTTGTGTGTGAACAAGTGCCATACAACAGATTGAGCCTCG,"Intron (Cadps-210/Cadps, intron 27 of 28)",14,12372563,12823053,450491,2,Cadps-210,433726,Cadps-210;Cadps-202;Cadps-203;Cadps-204;Cadps-201;Cadps-212;Cadps-208,Cadps;Cadps;Cadps;Cadps;Cadps;Cadps;Cadps,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,17,34,27062,ENSMUSG00000054423,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA18,
cg24184266,-0.233130348,NA,NA,NA,NA,NA,Sall3,Sall3_fiveUTR,18,80986674,80986723,80986674,80986675,50,-,CGCGCATGGGGCTGAGCAATTAGGCTGGTGAATAATGCATGGCCATTAGC,Promoter (<=1kb),18,80966376,80986771,20396,2,Sall3-201,48,Sall3-201;Sall3-203,Sall3;Sall3,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,5,10,20689,ENSMUSG00000024565,conserved gene but different region,18,80985515,80986677,1163,*,1163,120,0.682717111,0.88568473,0.103181427,1.42E-92,CpGisland,TRUE,BivProm3,Simple_repeat
cg24185526,NA,NA,NA,NA,0.590103483,NA,Wwox,Wwox_Intron,8,114514728,114514777,114514776,114514777,50,-,TAGCCTCTTATTACCATGTTTGTATTGTTTGCAAATACTATTTACAGTCG,"Intron (Wwox-201/Wwox, intron 5 of 8)",8,114439655,115352708,913054,1,Wwox-201,75073,Wwox-201;Wwox-207;Wwox-203;Wwox-208,Wwox;Wwox;Wwox;Wwox,0;0;0;66518,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,32,32,80707,ENSMUSG00000004637,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA17,
cg24205097,-0.37464143,NA,NA,NA,NA,NA,Nog,Nog_Intergenic_downstream,11,89300205,89300254,89300253,89300254,50,-,GGGTCAAGTTTCAGCGGCACTCCGCCCCCAGGGTAGGTGTGAAAGACACG,Distal Intergenic,11,89300638,89302332,1695,2,Nog-201,2127,Nog-201,Nog,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,16,36,18121,ENSMUSG00000048616,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg24208901,NA,NA,NA,0.315903384,NA,NA,Fam214b,Fam214b_fiveUTR,4,43037132,43037181,43037180,43037181,50,-,GCAGTCTGATCCATGCCTGCTGCACTGGCAAGGTGACTGCCACCATTCCG,5' UTR,4,43032414,43040288,7875,2,Fam214b-204,3107,Fam214b-204;Fam214b-205;Fam214b-202;Fam214b-203;Fam214b-201;Fam214b-207;Fam214b-210;Fam214b-206;Fam214b-209;Fam214b-208,Fam214b;Fam214b;Fam214b;Fam214b;Fam214b;Fam214b;Fam214b;Fam214b;Fam214b;Fam214b,0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,5,230088,ENSMUSG00000036002,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg24221221,NA,NA,NA,NA,0.208910288,NA,Casz1,Casz1_Intron,4,148885981,148886030,148885981,148885982,50,-,CGGGCTCCTGACAGCTCCTCAATACAGGAAGGAGGCCAAACAGAATATTT,"Intron (Casz1-201/Casz1, intron 2 of 15)",4,148804429,148945129,140701,1,Casz1-201,81552,Casz1-201;Casz1-202;Casz1-205,Casz1;Casz1;Casz1,0;0;-3351,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg24260138,-0.444034685,NA,NA,NA,NA,NA,Ylpm1,Ylpm1_Exon,12,84996668,84996717,84996668,84996669,50,+,CGCAGCTCCAGCAGCTGCAGCAGATGCACCAGAAGCAAATGCAGTGCGTG,Promoter (<=1kb),12,84996321,85070492,74172,1,Ylpm1-207,347,Ylpm1-207;Ylpm1-201;Ylpm1-202,Ylpm1;Ylpm1;Ylpm1,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,11,13,56531,ENSMUSG00000021244,conserved gene and region,12,84996187,84996669,483,*,483,66,0.685300207,1.177004874,0.136645963,2.43E-60,CpGisland,TRUE,PromF4,
cg24291087,NA,NA,NA,NA,0.404667912,NA,Pcdh7,Pcdh7_fiveUTR,5,57718848,57718897,57718848,57718849,50,+,CGATTAGCACCCATTGCATGAATTATGAAACAATAACTTTCGGAAGAAGC,Promoter (<=1kb),5,57717967,58133230,415264,1,Pcdh7-203,881,Pcdh7-203;Pcdh7-201;Pcdh7-202;Pcdh7-205;Pcdh7-206;Pcdh7-207;Pcdh7-204,Pcdh7;Pcdh7;Pcdh7;Pcdh7;Pcdh7;Pcdh7;Pcdh7,0;0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,5,13,54216,ENSMUSG00000029108,conserved gene and region,5,57718758,57718889,132,*,132,13,0.575757576,1.230107527,0.098484848,3.82E-10,CpGisland,TRUE,PromF5,
cg24326491,NA,NA,NA,NA,1.688435706,NA,Nipbl,Nipbl_Intron,15,8291714,8291763,8291714,8291715,50,-,CGGCAATGAGACGCACCGTGACCGCCAGCGCCAAGGGGTTAACATATACT,"Intron (Nipbl-201/Nipbl, intron 46 of 46)",15,8290617,8444463,153847,2,Nipbl-201,152700,Nipbl-201,Nipbl,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,9,36,71175,ENSMUSG00000022141,conserved gene and region,15,8291652,8291795,144,*,144,11,0.506944444,1.194570136,0.076388889,1.84E-07,CpGisland,TRUE,Tx5,
cg24350085,-0.000260291,NA,NA,NA,NA,NA,Gsx2,Gsx2_Promoter,5,75071882,75071931,75071882,75071883,50,-,CGGGTAAGATGTGCCACAGACAGCAATATCACAATGCCACTCGGAGAAAA,Promoter (3-4kb),5,75075601,75077893,2293,1,Gsx2-201,-3719,Gsx2-201;Gsx2-202,Gsx2;Gsx2,-3670;-3671,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,5,10,14843,ENSMUSG00000035946,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg24352905,0.138312663,NA,NA,NA,1.276822081,0.035114852,Otp,Otp_Promoter,13,94868966,94869015,94869014,94869015,50,+,GACCCCTTTACTCCGTGACGTGCAACCGCTCCATCTCATTAAGGAAATCG,Promoter (6-7kb),13,94875602,94885130,9529,1,Otp-201,-6587,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,27,34,18420,ENSMUSG00000021685,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm1,
cg24355006,-0.001157759,NA,NA,NA,NA,NA,Csnk1g2,Csnk1g2_fiveUTR,10,80634427,80634476,80634427,80634428,50,+,CGTGGAGAGGCCAGGGTATCACAAACTTATGGATTTTGACAAGAAAGGAG,5' UTR,10,80622838,80640741,17904,1,Csnk1g2-201,11589,Csnk1g2-201;Csnk1g2-202;Csnk1g2-205;Csnk1g2-203;Csnk1g2-204;Csnk1g2-207;Csnk1g2-206,Csnk1g2;Csnk1g2;Csnk1g2;Csnk1g2;Csnk1g2;Csnk1g2;Csnk1g2,0;0;0;-1689;-3794;-4685;-4920,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,1,1,103236,ENSMUSG00000003345,conserved gene and region,10,80634310,80634428,119,*,119,13,0.672268908,0.982222222,0.109243697,9.66E-11,CpGisland,TRUE,,
cg24444575,0.095481965,NA,NA,NA,0.265663286,NA,Dgki,Dgki_fiveUTR,6,37299904,37299953,37299904,37299905,50,-,CGCTGGCAGGGGCAGCAAATGGCAGCCCCTTCCCGCAGCATCCATCCGCG,Promoter (<=1kb),6,36846022,37299974,453953,2,Dgki-203,21,Dgki-203;Dgki-202;Dgki-205;Dgki-208;Dgki-201;Dgki-204,Dgki;Dgki;Dgki;Dgki;Dgki;Dgki,0;0;0;0;0;-160,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,2,7,320127,ENSMUSG00000038665,conserved gene but different region,,,,,,,,,,,,,TRUE,TSS2,
cg24480093,NA,NA,NA,NA,-0.500594534,NA,Casz1,Casz1_Intron,4,148807306,148807355,148807306,148807307,50,-,CGGTTAAGGAGAGTTTATGGGGAATATTGTTGAACTTCAGTAATCAGGTT,"Intron (Casz1-201/Casz1, intron 1 of 15)",4,148804429,148945129,140701,1,Casz1-201,2877,Casz1-201;Casz1-202;Casz1-203,Casz1;Casz1;Casz1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,94,124,69743,ENSMUSG00000028977,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg24539381,NA,NA,0.070227192,NA,NA,NA,Pum2,Pum2_Exon,12,8733417,8733466,8733465,8733466,50,-,TAGGCATGCCTCTGCCAAGCCAAACTCCAGGACATTCACTTACGCCACCG,"Exon (Pum2-203/Pum2, exon 13 of 21)",12,8674134,8751454,77321,1,Pum2-203,59283,Pum2-203;Pum2-216;Pum2-201;Pum2-202;Pum2-207;Pum2-204;Pum2-210;Pum2-209;Pum2-206,Pum2;Pum2;Pum2;Pum2;Pum2;Pum2;Pum2;Pum2;Pum2,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,11,80913,ENSMUSG00000020594,conserved gene and region,,,,,,,,,,,,,TRUE,Tx7,
cg24561596,NA,NA,NA,NA,-1.082058458,NA,Copb1,Copb1_Exon,7,114219546,114219595,114219546,114219547,50,+,CGGCCCACATCTGACGGAATTCTGCATCAGTGCAAGTTGCAGGCTGGATA,"Exon (Copb1-201/Copb1, exon 19 of 22)",7,114215559,114254711,39153,2,Copb1-201,35116,Copb1-201;Copb1-202,Copb1;Copb1,0;-1385,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,70349,ENSMUSG00000030754,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg24590724,NA,NA,NA,NA,-1.389670321,NA,Dach1,Dach1_Intron,14,98156077,98156126,98156125,98156126,50,-,TCTGGAAAAAACAGACAAGTATGCACTCTTTTTAACTGCAGCTTAGGGCG,"Intron (Dach1-201/Dach1, intron 1 of 10)",14,97786853,98169543,382691,2,Dach1-201,13417,Dach1-201;Dach1-202;Dach1-203,Dach1;Dach1;Dach1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,61,76,13134,ENSMUSG00000055639,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk4,
cg24643424,0.391375851,NA,1.104271935,NA,NA,NA,Map4k4,Map4k4_Exon,1,40011621,40011670,40011621,40011622,50,+,CGAGACAAGTGTGCCTGTTTTTTCTACAGAGTACAGTTGACCAAAAGCGT,"Exon (Map4k4-213/Map4k4, exon 22 of 31)",1,39900913,40026310,125398,1,Map4k4-201,110708,Map4k4-201;Map4k4-202;Map4k4-213;Map4k4-218;Map4k4-215;Map4k4-217;Map4k4-209;Map4k4-208;Map4k4-205;Map4k4-207;Map4k4-210,Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4;Map4k4,0;0;0;0;0;0;0;0;0;4228;-2182,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,12,26921,ENSMUSG00000026074,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEx2,
cg24648594,-0.723433181,NA,NA,NA,NA,NA,Sp5,Sp5_fiveUTR,2,70475023,70475072,70475071,70475072,50,+,GGGTAGCGGCAAACTTCAAAGCCATAAATCTTCCCTCTGACTGGCTGGCG,Promoter (<=1kb),2,70474923,70477729,2807,1,Sp5-201,100,Sp5-201,Sp5,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,7,11,64406,ENSMUSG00000075304,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm1,
cg24653257,-0.046748457,NA,NA,NA,NA,NA,Hand1,Hand1_Promoter,11,57837144,57837193,57837192,57837193,50,-,CCTGTTTATATTAGCGCGGTGTAAAATATTCTCGCTGTCTTGGGGAATCG,Promoter (4-5kb),11,57828705,57832818,4114,2,Hand1-203,-4375,Hand1-203;Hand1-201;Hand1-202,Hand1;Hand1;Hand1,-4326;-4997;-4326,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,4,4,15110,ENSMUSG00000037335,conserved gene and region,11,57837102,57837281,180,*,180,18,0.533333333,1.408695652,0.1,4.82E-14,CpGisland,TRUE,ReprPC1,
cg24664689,-0.078805664,NA,NA,NA,NA,NA,Xkr6,Xkr6_Exon,14,63606681,63606730,63606681,63606682,50,+,CGATGCACATCTGCCACTGCTGCAACACCTCCTCGTGCTACTGGGGCTGC,Promoter (<=1kb),14,63606503,63820809,214307,1,Xkr6-201,178,Xkr6-201;Xkr6-203;Xkr6-205,Xkr6;Xkr6;Xkr6,0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,10,11,219149,ENSMUSG00000035067,conserved gene and region,14,63606019,63607249,1231,*,1231,130,0.728675873,0.7956862,0.105605199,1.15E-101,CpGisland,TRUE,TSS1,
cg24677551,-0.000165978,-0.093644087,NA,NA,NA,NA,Rnf220,Rnf220_Exon,4,117272681,117272730,117272681,117272682,50,-,CGTCCGAGCCTTTTATTACTGTCTCCGGGCGACATTTTAATGGCTGCTCC,"Exon (Rnf220-211/Rnf220, exon 2 of 2)",4,117271463,117497052,225590,2,Rnf220-201,224322,Rnf220-201;Rnf220-203;Rnf220-212;Rnf220-202;Rnf220-205;Rnf220-214;Rnf220-211;Rnf220-209;Tmem53-201;Tmem53-204;Tmem53-203;Tmem53-206;Tmem53-202;Tmem53-205,Rnf220;Rnf220;Rnf220;Rnf220;Rnf220;Rnf220;Rnf220;Rnf220;Tmem53;Tmem53;Tmem53;Tmem53;Tmem53;Tmem53,0;0;0;0;0;0;0;0;20730;20641;20639;20619;20341;7310,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,152,66743,ENSMUSG00000028677,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh4,
cg24677671,NA,NA,NA,NA,-1.087715555,-0.838442024,Gtf2h4,Gtf2h4_Exon,17,35672725,35672774,35672725,35672726,50,+,CGGTCCAATACCCCAGGGCTCAGGCCCCCTAAGAATTCCTGCAGATTCCT,Promoter (<=1kb),17,35667730,35673739,6010,2,Gtf2h4-201,965,Gtf2h4-201;Gtf2h4-212;Gtf2h4-205;Gtf2h4-207;Gtf2h4-208;Gtf2h4-211;Gtf2h4-204;Gtf2h4-209;Gtf2h4-202;Gtf2h4-210;Gtf2h4-206;Gtf2h4-203,Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4;Gtf2h4,0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,3,14885,ENSMUSG00000001524,conserved gene and region,,,,,,,,,,,,,TRUE,PromF7,
cg24765266,NA,NA,NA,NA,0.645594197,NA,Tcf20,Tcf20_Intron,15,82963746,82963795,82963746,82963747,50,+,CGATTTACTGGCTGCAATTCCCGGCGCCCCTCGATGGCACTTAAGAGAGA,"Intron (Tcf20-203/Tcf20, intron 1 of 1)",15,82857130,82987872,130743,2,Tcf20-203,24077,Tcf20-204;Tcf20-203,Tcf20;Tcf20,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,13,21411,ENSMUSG00000041852,mapped to different genes,15,82963194,82964023,830,*,830,133,0.824096386,0.949281095,0.160240964,2.63E-132,CpGisland,TRUE,Dse1,
cg24831901,-0.109410744,NA,NA,NA,NA,NA,Prkce,Prkce_Exon,17,86168875,86168924,86168923,86168924,50,+,GTGGCCAACTGCACCATCCAGTTTGAGGAGCTGCTGCAGAACGGGAGCCG,"Exon (Prkce-202/Prkce, exon 1 of 15)",17,86167785,86657919,490135,1,Prkce-202,1090,Prkce-202;Prkce-204;Prkce-201,Prkce;Prkce;Prkce,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,7,18754,ENSMUSG00000045038,conserved gene and region,17,86168631,86168971,341,*,341,31,0.618768328,0.951485149,0.090909091,1.51E-22,CpGisland,TRUE,PromF5,
cg24860713,0.188822539,NA,NA,NA,NA,NA,Apba1,Apba1_Exon,19,23893249,23893298,23893249,23893250,50,+,CGCGCTGCCCAACCACCTGCACTTCCACTCGCTGGAGCACGAGGAAGCCA,"Exon (Apba1-201/Apba1, exon 2 of 13)",19,23758887,23949596,190710,1,Apba1-201,134362,Apba1-201,Apba1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,5,5,319924,ENSMUSG00000024897,conserved gene and region,19,23892739,23893861,1123,*,1123,151,0.715939448,1.050410382,0.134461264,4.45E-136,CpGisland,TRUE,Acet1,
cg24866418,0.075381896,NA,0.902792434,0.289225711,0.190277507,0.549729587,Lhfpl4,Lhfpl4_Exon,6,113193894,113193943,113193942,113193943,50,-,GATGCAGCCGAGGATCAGCACCATGGAGAGCAGCACGAAGAAGGCGGCCG,Promoter (<=1kb),6,113175395,113193943,18549,2,Lhfpl4-202,0,Lhfpl4-201;Lhfpl4-202,Lhfpl4;Lhfpl4,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,269788,ENSMUSG00000042873,conserved gene and region,6,113193884,113194365,482,*,482,42,0.668049793,0.8053467,0.087136929,1.49E-29,CpGisland,TRUE,BivProm2,
cg24867198,NA,NA,NA,NA,0.085278915,0.15706146,Zfpm2,Zfpm2_Intron,15,40978774,40978823,40978774,40978775,50,+,CGCTGCAAGGTAGGTGATGTCTAGGTTTTTAATCTTCCACTCCGGAGAGG,"Intron (Zfpm2-201/Zfpm2, intron 5 of 7)",15,40655035,41104592,449558,1,Zfpm2-201,323739,Zfpm2-201;Zfpm2-203,Zfpm2;Zfpm2,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,39,41,22762,ENSMUSG00000022306,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA2,
cg24975211,-0.051643873,NA,NA,NA,NA,NA,Nr1d1,Nr1d1_threeUTR,11,98768102,98768151,98768150,98768151,50,+,TTTTATAACAATATAAATAAGATTCTGGTTTGCTTTTCCTTTTCGTCTCG,3' UTR,11,98767932,98775333,7402,2,Nr1d1-201,7182,Nr1d1-201;Nr1d1-202;Thra-201;Thra-202;Thra-203,Nr1d1;Nr1d1;Thra;Thra;Thra,0;2275;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,3,9,217166,ENSMUSG00000020889,mapped to different genes,11,98768145,98768493,349,*,349,27,0.633237822,0.781732205,0.077363897,8.51E-18,CpGisland,TRUE,TxEnh4,
cg25061576,NA,NA,NA,NA,-0.29403669,NA,Gsx2,Gsx2_Promoter,5,75071938,75071987,75071986,75071987,50,-,ATACAAGTTAACGATGCACTTTCAATAAAACATTCATAGACTTGTTCACG,Promoter (3-4kb),5,75075601,75077893,2293,1,Gsx2-201,-3663,Gsx2-201;Gsx2-202,Gsx2;Gsx2,-3614;-3615,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,5,10,14843,ENSMUSG00000035946,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg25064060,NA,NA,NA,NA,0.265728572,NA,Ranbp17,Ranbp17_Intron,11,33297498,33297547,33297546,33297547,50,+,GGCAATAATGACCACATATCTGATTTTGATTCATTAGCTAAAATGTCTCG,"Intron (Ranbp17-202/Ranbp17, intron 19 of 27)",11,33211795,33513746,301952,2,Ranbp17-202,216199,Ranbp17-202;Ranbp17-206;Ranbp17-203,Ranbp17;Ranbp17;Ranbp17,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,26,31,66011,ENSMUSG00000040594,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg25072946,0.007475958,NA,NA,NA,NA,NA,Mark2,Mark2_threeUTR,19,7275905,7275954,7275953,7275954,50,-,AACAGCAGAGAAATAAATTAAGGGATGCAGTGGCCACCACCAGCCAAGCG,3' UTR,19,7275396,7341819,66424,2,Mark2-202,65865,Mark2-202;Mark2-206;Mark2-201;Mark2-221;Mark2-209;Mark2-203;Mark2-211;Mark2-207;Mark2-218;Mark2-215;Mark2-212;Mark2-208;Mark2-219;Mark2-204;Rcor2-201;Rcor2-202;Rcor2-203,Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Mark2;Rcor2;Rcor2;Rcor2,0;0;0;0;0;0;0;0;0;0;0;0;0;5987;0;0;4953,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,10,13728,ENSMUSG00000024969,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg25080417,NA,NA,NA,NA,-0.128872318,NA,Tshz3,Tshz3_Intergenic_upstream,7,36477125,36477174,36477125,36477126,50,-,CGAGGGGAGCCTGTAATGACTGGATATTGAGAAAGATTCCGAAAGATTAG,Distal Intergenic,7,36698118,36773553,75436,1,Tshz3-201,-220993,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,12,58,243931,ENSMUSG00000021217,mapped to different genes,,,,,,,,,,,,,TRUE,HET2,
cg25102951,NA,NA,NA,0.039560782,NA,NA,Pbx1,Pbx1_Intron,1,168357894,168357943,168357894,168357895,50,-,CGAATAAATGTTGATTAGTGTTGATTTTGTCCGACAAACGCCTGTCGAGT,"Intron (Pbx1-208/Pbx1, intron 2 of 7)",1,168119364,168432270,312907,2,Pbx1-208,74327,Pbx1-208;Pbx1-205;Pbx1-206;Pbx1-201;Pbx1-202;Pbx1-204,Pbx1;Pbx1;Pbx1;Pbx1;Pbx1;Pbx1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,50,84,18514,ENSMUSG00000052534,conserved gene and region,1,168357767,168357940,174,*,174,14,0.568965517,1.0875,0.08045977,1.09E-09,CpGisland,TRUE,EnhA19,
cg25133549,0.117921811,NA,NA,NA,NA,NA,Tnrc6a,Tnrc6a_threeUTR,7,123170393,123170442,123170393,123170394,50,-,CGTGTGAGCACAATGAATCATCCTCAGATGCAGGCTCCATCAGGTATGAA,3' UTR,7,123124177,123193987,69811,1,Tnrc6a-203,46216,Tnrc6a-203;Tnrc6a-201;Tnrc6a-210;Tnrc6a-206;Tnrc6a-205;Tnrc6a-202;Tnrc6a-211;Tnrc6a-204;Tnrc6a-207,Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a;Tnrc6a,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,24,233833,ENSMUSG00000052707,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx2,
cg25139325,-1.430598416,-0.005540756,-2.191377803,NA,NA,NA,Pou2f1,Pou2f1_Intron,1,166001158,166001207,166001158,166001159,50,+,CGAATGTAAAATATAAACACGGCGTTGGGCTGTGAGTGGCTGTTATTAAA,"Intron (Pou2f1-208/Pou2f1, intron 1 of 16)",1,165865154,166002678,137525,2,Pou2f1-208,1471,Pou2f1-208;Pou2f1-206;Pou2f1-216;Pou2f1-209;Pou2f1-201;Pou2f1-215;Pou2f1-214;Pou2f1-211;Pou2f1-212,Pou2f1;Pou2f1;Pou2f1;Pou2f1;Pou2f1;Pou2f1;Pou2f1;Pou2f1;Pou2f1,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,7,18,18986,ENSMUSG00000026565,conserved gene and region,,,,,,,,,,,,,TRUE,PromF3,
cg25237839,NA,NA,-0.251207225,NA,NA,NA,Bcor,Bcor_Intron,X,12126684,12126733,12126732,12126733,50,-,TGGCTTTCCACATGAGCCTGAAAATGTCGACAAATTTGAAACATCTGCCG,"Intron (Bcor-201/Bcor, intron 1 of 13)",20,12036743,12160355,123613,2,Bcor-201,33622,Bcor-201;Bcor-207;Bcor-205;Bcor-208,Bcor;Bcor;Bcor;Bcor,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,56,74,71458,ENSMUSG00000040363,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg25291437,NA,NA,0.796298874,NA,NA,NA,Lcorl,Lcorl_threeUTR,5,45730399,45730448,45730447,45730448,50,+,AGTGCAAAAGCATTGAAGTGCTTTACTACAAATTACAACCTAGAAACACG,3' UTR,5,45697181,45857615,160435,2,Lcorl-202,127167,Lcorl-202;Lcorl-212;Lcorl-210;Lcorl-205;Lcorl-211;Lcorl-204;Lcorl-201,Lcorl;Lcorl;Lcorl;Lcorl;Lcorl;Lcorl;Lcorl,0;0;0;0;-2821;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,5,9,209707,ENSMUSG00000015882,conserved gene and region,,,,,,,,,,,,,TRUE,Quies3,
cg25297228,NA,NA,NA,NA,0.004799836,0.415066568,Neurog2,Neurog2_Promoter,3,127627236,127627285,127627284,127627285,50,-,ACTCCTTGAATGACATCAAAAGAATGAGTTTCCATAGCTGTTGAAGCACG,Promoter (5-6kb),3,127633135,127635631,2497,1,Neurog2-201,-5899,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,14,11924,ENSMUSG00000027967,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg25379954,NA,NA,NA,NA,0.234993802,NA,Prox1,Prox1_Exon,1,190161835,190161884,190161883,190161884,50,-,GGGGGCTGTCTCTTGAAGAGTTGCTGCATATATCCTCCTGATGTACTTCG,"Exon (Prox1-202/Prox1, exon 2 of 5)",1,190118035,190170714,52680,2,Prox1-202,8830,Prox1-202;Prox1-201;Prox1-203,Prox1;Prox1;Prox1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,19,59,19130,ENSMUSG00000010175,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg25424749,-0.050933803,NA,NA,NA,NA,NA,Erfl,Erfl_Promoter,7,24944932,24944981,24944932,24944933,50,+,CGGAAAATAAAGTTCAGAGCTGATCAAATTTGAAAACAGATGTCGAATCG,Promoter (<=1kb),7,24927445,24944494,17050,2,Erfl-201,-438,Erfl-201,Erfl,0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,29,36,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg25452665,-0.233055845,NA,NA,NA,NA,NA,Hand1,Hand1_Promoter,11,57837128,57837177,57837176,57837177,50,-,AGGACCCGGCCGGCCGCCTGTTTATATTAGCGCGGTGTAAAATATTCTCG,Promoter (4-5kb),11,57828705,57832818,4114,2,Hand1-203,-4359,Hand1-203;Hand1-201;Hand1-202,Hand1;Hand1;Hand1,-4310;-4981;-4310,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,4,4,15110,ENSMUSG00000037335,conserved gene and region,11,57837102,57837281,180,*,180,18,0.533333333,1.408695652,0.1,4.82E-14,CpGisland,TRUE,ReprPC1,
cg25476259,NA,NA,NA,NA,-0.061834666,NA,Zeb2,Zeb2_threeUTR,2,45095977,45096026,45095977,45095978,50,-,CGTCACACCACTTTAGTTCAACAGTGCCTGTCGAATGGGCATCAGCAGAT,3' UTR,2,44983632,45117395,133764,2,Zeb2-212,21369,Zeb2-212;Zeb2-213;Zeb2-201;Zeb2-202;Zeb2-215;Zeb2-214;Zeb2-203;Zeb2-221;Zeb2-220;Zeb2-216;Zeb2-222;Zeb2-208;Zeb2-228;Zeb2-226;Zeb2-209;Zeb2-224;Zeb2-207;Zeb2-219;Zeb2-211,Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2;Zeb2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,10,158,24136,ENSMUSG00000026872,conserved gene but different region,,,,,,,,,,,,,TRUE,TxEnh7,
cg25483422,-0.112156894,NA,NA,NA,NA,NA,Fgfr2,Fgfr2_Exon,7,130198509,130198558,130198557,130198558,50,-,CATTCCGAATATAGAGAACCTCAATCTCTTTGTCCGTGGTGTTAACACCG,"Exon (Fgfr2-207/Fgfr2, exon 6 of 16)",7,130162451,130266263,103813,2,Fgfr2-211,67705,Fgfr2-211;Fgfr2-217;Fgfr2-207;Fgfr2-226;Fgfr2-215;Fgfr2-201;Fgfr2-202;Fgfr2-203;Fgfr2-204;Fgfr2-205;Fgfr2-206;Fgfr2-208;Fgfr2-209;Fgfr2-210;Fgfr2-212;Fgfr2-213;Fgfr2-214;Fgfr2-216;Fgfr2-222;Fgfr2-225;Fgfr2-218,Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2;Fgfr2,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,12,79,14183,ENSMUSG00000030849,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg25551677,NA,NA,-0.046097491,NA,NA,NA,Bcor,Bcor_Intron,X,12152636,12152685,12152636,12152637,50,+,CGAAAGCAGCAGCCCAGGCAAATATGTAGCTATTAAAATTAATCGCCCCG,"Intron (Bcor-201/Bcor, intron 1 of 13)",20,12036743,12160355,123613,2,Bcor-201,7670,Bcor-201;Bcor-208,Bcor;Bcor,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,56,74,71458,ENSMUSG00000040363,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA18,
cg25580139,NA,NA,NA,-0.596269696,NA,NA,Dll1,Dll1_Promoter,17,15377029,15377078,15377029,15377030,50,-,CGAGGCTGAATCAGTGGCTCTTTGTGCGCTCAGCTGTATGGTAATGCAGA,Promoter (<=1kb),17,15374794,15376872,2079,2,Dll1-205,-206,Dll1-201;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1,-1053;-2957;-1929;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,,,,,,,,,,,,,TRUE,BivProm1,
cg25583823,NA,NA,NA,0.063896549,NA,NA,Kmt2d,Kmt2d_threeUTR,15,98833823,98833872,98833871,98833872,50,-,AAATCCAACACTTAAATGAGGTAGGTGTGGGTGCGGGGTCTCCTTGCCCG,3' UTR,15,98831669,98871183,39515,2,Kmt2d-202,37311,Kmt2d-202;Kmt2d-201;Kmt2d-204;Prkag1-201;Prkag1-206;Prkag1-203;Prkag1-205,Kmt2d;Kmt2d;Kmt2d;Prkag1;Prkag1;Prkag1;Prkag1,0;0;0;-2302;-2852;-2369;-2335,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,5,16,381022,ENSMUSG00000048154,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx3,
cg25607172,NA,NA,NA,NA,0.682843603,NA,Nkx2-3,Nkx2-3_Exon,19,43614518,43614567,43614566,43614567,50,+,CAGGTGAAAATCTGGTTCCAGAATCGCAGGTACAAGTGCAAGAGACAGCG,"Exon (Nkx2-3-201/Nkx2-3, exon 2 of 2)",19,43612325,43615892,3568,1,Nkx2-3-201,2193,Nkx2-3-201,Nkx2-3,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,6,18089,ENSMUSG00000044220,conserved gene and region,19,43614336,43615012,677,*,677,89,0.70310192,1.063713721,0.131462334,1.99E-79,CpGisland,TRUE,BivProm1,
cg25651791,-0.388484531,NA,NA,NA,NA,NA,Nr6a1,Nr6a1_Intron,2,38925333,38925382,38925333,38925334,50,+,CGCTAATTGCTCCAGGGCGCTTTCCAAGTTCAAAAGTTCACCTTTTACGA,"Intron (Nr6a1-202/Nr6a1, intron 2 of 11)",2,38723370,38927688,204319,2,Nr6a1-202,2306,Nr6a1-202;Nr6a1-201;Nr6a1-208,Nr6a1;Nr6a1;Nr6a1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,12,14536,ENSMUSG00000063972,conserved gene and region,2,38925258,38925381,124,*,124,11,0.596774194,0.999267399,0.088709677,3.88E-08,CpGisland,TRUE,BivProm1,
cg25654366,NA,NA,-0.134424529,NA,NA,NA,Eri3,Eri3_Intron,4,117658079,117658128,117658079,117658080,50,+,CGCGTTGTAATTGTGAACAAGCTGTAATGTTTAATTAGTCTGTAAATGAA,"Intron (Eri3-201/Eri3, intron 8 of 8)",4,117550365,117674297,123933,1,Eri3-201,107714,Eri3-201;Eri3-206;Eri3-203,Eri3;Eri3;Eri3,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,82,97,140546,ENSMUSG00000033423,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg25657841,NA,NA,NA,NA,-0.485275662,NA,Neurog2,Neurog2_Promoter,3,127627429,127627478,127627477,127627478,50,-,CGCCAATATAAATAACAAAACAACTCTTGTGGCTGCACTATTCCTACACG,Promoter (5-6kb),3,127633135,127635631,2497,1,Neurog2-201,-5706,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,13,14,11924,ENSMUSG00000027967,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC1,
cg25658543,NA,NA,0.110418538,NA,NA,NA,Eif4g2,Eif4g2_Exon,7,111077241,111077290,111077241,111077242,50,-,CGAATTTGATTGATCGTCTTTGGTCCATTGTCAAGAAAAGCCTTGCGAGG,"Exon (Eif4g2-213/Eif4g2, exon 11 of 22)",7,111067750,111083030,15281,2,Eif4g2-213,5740,Eif4g2-213;Eif4g2-206;Eif4g2-207;Eif4g2-208;Eif4g2-214;Eif4g2-202;Eif4g2-204;Eif4g2-211;Eif4g2-210;Eif4g2-209;Eif4g2-203;Eif4g2-201;Eif4g2-212;Eif4g2-205,Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2;Eif4g2,0;0;0;0;-2992;-2542;-1856;-1032;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,20,22,13690,ENSMUSG00000005610,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg25667123,NA,NA,NA,NA,-0.080557298,NA,Gm9341,Gm9341_Intergenic_downstream,7,135965754,135965803,135965802,135965803,50,-,CTGTGTTTGTCTTTGGCTCTCAGAAGGACAAAATTCACCATGTGGCGACG,Distal Intergenic,7,135952798,135953783,986,1,Gm9341-201,13005,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,27,28,668764,NA,mapped to different genes,,,,,,,,,,,,,TRUE,HET2,
cg25670483,0.334586642,NA,NA,NA,NA,NA,Rnf220,Rnf220_Exon,4,117297619,117297668,117297619,117297620,50,+,CGGAATAAAAAAAGGTCACTGGTGCTTTTTAAACATGGACCAAAAAGCAG,"Exon (Gm12843-201/Gm12843-201, exon 2 of 2)",4,117271463,117497052,225590,2,Rnf220-201,199384,Rnf220-201;Rnf220-202;Rnf220-208,Rnf220;Rnf220;Rnf220,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,15,152,66743,ENSMUSG00000028677,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg25731502,-0.015556765,NA,-0.440018006,NA,NA,NA,Mbnl1,Mbnl1_fiveUTR,3,60529032,60529081,60529080,60529081,50,+,GATTTTGCTCTAAACTGCTGCATCTGTCTATGCCAAACTAATCAATACCG,5' UTR,3,60472830,60595764,122935,1,Mbnl1-222,56202,Mbnl1-222;Mbnl1-221;Mbnl1-216;Mbnl1-220;Mbnl1-211;Mbnl1-204;Mbnl1-201;Mbnl1-209;Mbnl1-202;Mbnl1-225;Mbnl1-217;Mbnl1-203;Mbnl1-218;Mbnl1-208;Mbnl1-219;Mbnl1-214;Mbnl1-207;Mbnl1-205;Mbnl1-212,Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1;Mbnl1,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,3,36,56758,ENSMUSG00000027763,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx4,
cg25736045,NA,NA,-0.032222077,NA,-0.237474694,-0.088382445,Jag1,Jag1_Intergenic_upstream,2,137560537,137560586,137560585,137560586,50,+,CAAAGCATGATTCAGAATCTAATTTTGTCAGCTGGTGATTGGCTCCCACG,Distal Intergenic,2,137081456,137116644,35189,2,Jag1-201,-443893,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,8,16,16449,ENSMUSG00000027276,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA17,
cg25824158,-0.084973665,NA,NA,NA,NA,NA,Camk2g,Camk2g_Exon,14,20757705,20757754,20757705,20757706,50,-,CGGGGGCGGAGCTCTGCCTGCCAACTGAGGGGATACAGTCTCTCAGTGCA,"Exon (Camk2g-209/Camk2g, exon 4 of 11)",14,20734875,20794051,59177,2,Camk2g-203,36297,Camk2g-203;Camk2g-201;Camk2g-202;Camk2g-217;Camk2g-209;Camk2g-204;Camk2g-212;Camk2g-211;Camk2g-214;Camk2g-216;Camk2g-206,Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g;Camk2g,0;0;0;0;0;0;0;0;0;0;7755,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,15,12325,ENSMUSG00000021820,conserved gene and region,14,20757639,20757712,74,*,74,11,0.783783784,0.986666667,0.148648649,1.07E-10,CpGisland,TRUE,TxEnh5,
cg25830596,NA,NA,-0.081110889,NA,NA,NA,Tfap2a,Tfap2a_threeUTR,13,40715667,40715716,40715667,40715668,50,-,CGACATAAAGCGTATCAAATATTTATTTATCTGGGCAACAAAGGACTATG,3' UTR,13,40715302,40730443,15142,2,Tfap2a-201,14727,Tfap2a-201;Tfap2a-202;Tfap2a-205;Tfap2a-203;Tfap2a-209;Tfap2a-208;Tfap2a-206,Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a;Tfap2a,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,5,57,21418,ENSMUSG00000021359,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC1,
cg25875743,NA,NA,NA,NA,1.628391794,NA,Plxnc1,Plxnc1_Intron,10,94808495,94808544,94808495,94808496,50,+,CGGGAAGTGACTACAGGCCGGATTAATTTCATTATCATCCTTAAGCAGAT,"Intron (Plxnc1-201/Plxnc1, intron 23 of 30)",10,94790866,94944835,153970,2,Plxnc1-201,136291,Plxnc1-201,Plxnc1,0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,5,54712,ENSMUSG00000074785,conserved gene and region,,,,,,,,,,,,,TRUE,Tx8,
cg25879860,0.097908248,NA,NA,NA,NA,NA,Gm14106,Gm14106_Intergenic_downstream,2,147691675,147691724,147691723,147691724,50,+,TTCCAAAACTCACAAATACCGAATAGCCAAAAGTTCCAAAGCTGTGCACG,Distal Intergenic,2,147668015,147668452,438,1,Gm14106-201,23660,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,1,1,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,ReprPC4,
cg25943464,NA,NA,NA,NA,0.634705306,NA,Ncam1,Ncam1_threeUTR,9,49503635,49503684,49503683,49503684,50,+,CACAACCAAACTATGTTGAAGTTTTATTTCAATACTATGACAAAAACACG,3' UTR,9,49502136,49798925,296790,2,Ncam1-204,295241,Ncam1-204;Ncam1-205;Ncam1-202,Ncam1;Ncam1;Ncam1,0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,3,16,17967,ENSMUSG00000039542,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg25982943,NA,NA,NA,NA,0.023186805,NA,Lhfpl4,Lhfpl4_Exon,6,113194079,113194128,113194079,113194080,50,+,CGCCCACCCAGTAGGGCTGGATGAAGACCACCACGTTGATGATGGCGAAG,"Exon (Lhfpl4-201/Lhfpl4, exon 2 of 4)",6,113168090,113195384,27295,2,Lhfpl4-201,1256,Lhfpl4-201;Lhfpl4-202,Lhfpl4;Lhfpl4,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,269788,ENSMUSG00000042873,conserved gene and region,6,113193884,113194365,482,*,482,42,0.668049793,0.8053467,0.087136929,1.49E-29,CpGisland,TRUE,BivProm2,
cg26019380,NA,-0.254213758,NA,NA,NA,NA,Setd5,Setd5_fiveUTR,6,113105047,113105096,113105047,113105048,50,+,CGTCATGAGCATTGCAATCCCTCTGGGAGTCACCACATCAGATACATCCT,5' UTR,6,113077365,113107561,30197,1,Setd5-209,27682,Setd5-209;Setd5-201;Setd5-206;Setd5-205;Setd5-203;Setd5-212;Setd5-202;Setd5-204;Setd5-210,Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5;Setd5,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,19,72895,ENSMUSG00000034269,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg26022924,-0.088952744,NA,NA,NA,NA,NA,Reck,Reck_Exon,4,43905084,43905133,43905084,43905085,50,-,CGTTACCTGCAGCTGATGAGCTCCAAAAAGAGCGAAACCTATTAGGTCCT,"Exon (Gm27265-201/Gm27265-201, exon 1 of 1)",4,43875530,43944745,69216,1,Reck-202,29554,Reck-202;Reck-201,Reck;Reck,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,53614,ENSMUSG00000028476,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg26062249,NA,NA,NA,NA,0.168847617,NA,Pax2,Pax2_Intergenic_upstream,19,44734482,44734531,44734482,44734483,50,+,CGGAGATGTTACTCCGGAGTTGGAGACGATGATAAATATGATAATTTGTA,Distal Intergenic,19,44756045,44837851,81807,1,Pax2-203,-21514,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,101,166,18504,ENSMUSG00000004231,conserved gene and region,19,44734344,44734509,166,*,166,19,0.728915663,1.030718954,0.114457831,5.57E-16,CpGisland,TRUE,ReprPC1,
cg26085807,NA,NA,NA,NA,-0.128404942,NA,Gm28308,Gm28308_Intron,6,52197015,52197064,52197063,52197064,50,+,TGCACAATGTAAACTTTTGACCCTCAACTTTTTGACCTGCAGTTGTAACG,"Intron (Hoxaas3-202/Hoxaas3-202, intron 1 of 2)",6,52163359,52213339,49981,2,Gm28308-201,16275,Gm28308-201;Hoxa3-201;Hoxa3-203;Hoxa5-201,Gm28308;Hoxa3;Hoxa3;Hoxa5,0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,46,103,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg26127669,NA,NA,NA,NA,-0.358265457,NA,Gm38154,Gm38154_Exon,3,17793889,17793938,17793937,17793938,50,+,TTTGTTTGGCTGGAGCGAGCCATTAATCCCTAATTCTGGATCAGCAAGCG,"Exon (Mir124-2hg-202/Mir124-2hg-202, exon 1 of 2)",3,17670688,17671027,340,1,Gm38154-201,123201,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,3,15,NA,NA,mapped to different genes,3,17793904,17794069,166,*,166,12,0.590361446,0.928671329,0.072289157,7.76E-08,CpGisland,TRUE,BivProm3,
cg26219540,NA,NA,NA,NA,1.178599822,NA,Nr2f1,Nr2f1_Exon,13,78181730,78181779,78181730,78181731,50,+,CGGCACAGTCGCGAACCATCTGGTGTGTATTAAGAGTGGTGCTGTAAATA,"Exon (3110006O06Rik-201/3110006O06Rik-201, exon 2 of 2)",13,78189872,78190443,572,2,Nr2f1-204,8664,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,25,55,13865,ENSMUSG00000069171,conserved gene and region,13,78181696,78181859,164,*,164,10,0.475609756,1.114130435,0.06097561,6.12E-06,CpGisland,TRUE,BivProm2,
cg26231191,NA,NA,NA,NA,0.248844847,NA,Hoxd3,Hoxd3_Exon,2,74749747,74749796,74749795,74749796,50,-,AAACTTCATAAATTATAAACAAGCCGCCTTGGCCTTCGCAATAAATTCCG,"Exon (Haglr-201/Haglr-201, exon 1 of 1)",2,74745722,74748442,2721,1,Hoxd3-206,4074,Gm28230-201;Hoxd3-203;Hoxd3-202;Hoxd3-201;Hoxd3-204;Hoxd3-206,Gm28230;Hoxd3;Hoxd3;Hoxd3;Hoxd3;Hoxd3,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,3,24,15434,ENSMUSG00000079277,mapped to different genes,2,74749625,74749796,172,*,172,17,0.61627907,1.042424242,0.098837209,3.41E-13,CpGisland,TRUE,BivProm2,
cg26234638,-0.010097477,NA,NA,NA,NA,NA,Zfp827,Zfp827_Promoter,8,79028385,79028434,79028433,79028434,50,+,GATCCGTTTCCATTGAAGAATATTACGCTCGGGGACAAGCCAGGTGCACG,Promoter (<=1kb),8,79028437,79071837,43401,1,Zfp827-201,-3,Zfp827-201;Zfp827-202;Zfp827-203;Zfp827-209,Zfp827;Zfp827;Zfp827;Zfp827,0;0;0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,10,28,622675,ENSMUSG00000071064,conserved gene but different region,8,79028199,79028434,236,*,236,23,0.588983051,1.130833333,0.097457627,1.44E-17,CpGisland,TRUE,PromF4,
cg26300812,NA,0.02543713,NA,NA,NA,NA,Dll4,Dll4_Promoter,2,119322259,119322308,119322307,119322308,50,-,GCTGCATTAAATTGTAAAATCGATTTATTGACCGGCAGGTGCGAGCAGCG,Promoter (3-4kb),2,119325784,119335962,10179,1,Dll4-201,-3525,Dll4-201,Dll4,0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,8,20,54485,ENSMUSG00000027314,conserved gene and region,2,119322082,119322448,367,*,367,37,0.632152589,1.026301867,0.100817439,1.47E-28,CpGisland,TRUE,BivProm2,
cg26339573,NA,-0.05407017,NA,NA,NA,NA,Irx3,Irx3_Exon,8,91991946,91991995,91991994,91991995,50,-,TCTGTACAGTGTCGACAGTCTGTAATGCCTTTTTAGCATGAATGACAACG,"Exon (Gm36670-201/Gm36670-201, exon 1 of 3)",8,91798525,91802067,3543,2,Irx3-202,-189928,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,16,36,16373,ENSMUSG00000031734,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA17,
cg26352306,NA,NA,NA,-0.160918616,NA,NA,Zbtb20,Zbtb20_Intron,16,43334506,43334555,43334554,43334555,50,-,TTCTGTATGTTTTTCCTTTAAAACCAAGAGCTGGGCAGGCATCCCATTCG,"Intron (Zbtb20-209/Zbtb20, intron 7 of 7)",16,42875881,43463175,587295,1,Zbtb20-209,458625,Zbtb20-209;Zbtb20-211;Zbtb20-217;Zbtb20-218;Zbtb20-204;Zbtb20-215;Zbtb20-201;Zbtb20-203,Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20;Zbtb20,0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,64,98,56490,ENSMUSG00000022708,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA3,
cg26352942,-0.048868221,NA,NA,NA,NA,NA,Hsf2,Hsf2_fiveUTR,10,57486526,57486575,57486526,57486527,50,-,CGTGCCGGCTTTCCTCAGCAAGCTGTGGACGCTTGTGGAGGAAACCCACA,Promoter (<=1kb),10,57486385,57507668,21284,1,Hsf2-206,141,Hsf2-206;Hsf2-201;Hsf2-204,Hsf2;Hsf2;Hsf2,0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,1,1,15500,ENSMUSG00000019878,conserved gene but different region,10,57486190,57487038,849,*,849,113,0.716136631,1.038650167,0.133097762,2.11E-101,CpGisland,TRUE,PromF4,
cg26375896,-0.354779809,NA,-0.764422087,NA,NA,NA,Maf,Maf_threeUTR,8,115703346,115703395,115703346,115703347,50,-,CGTGGTTAGTTAGTAACTCAAGATATAAAACAATTTTGCACAGCAAAATA,3' UTR,8,115682942,115707096,24155,2,Maf-201,3701,Maf-201;Maf-202,Maf;Maf,0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,2,23,17132,ENSMUSG00000055435,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm4,
cg26425570,NA,NA,-0.145206721,NA,NA,NA,Klf9,Klf9_Intron,19,23147178,23147227,23147226,23147227,50,-,AGTGCCTAGTAATTGGTACAAAGGCACTTTCTGTTTCTATGCAACACACG,"Intron (Klf9-201/Klf9, intron 1 of 1)",19,23141226,23168134,26909,1,Klf9-201,5952,Klf9-201;Klf9-202,Klf9;Klf9,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,13,16601,ENSMUSG00000033863,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg26466145,-2.45437196,NA,NA,NA,NA,NA,Lpp,Lpp_Intergenic_downstream,16,25059417,25059466,25059417,25059418,50,+,CGGGGCTTGATGTCTGCAAAATGTCGGAAACGCAGCCAAGAGCTGCTAAC,Distal Intergenic,16,24845175,24979450,134276,1,Lpp-206,214242,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,4,7,210126,ENSMUSG00000033306,mapped to different genes,,,,,,,,,,,,,TRUE,TSS2,
cg26509965,NA,NA,NA,NA,0.142692924,NA,Gata3,Gata3_Promoter,2,9896195,9896244,9896195,9896196,50,-,CGTTACCGCTGCGAGCTCCTAAATGAGTGTCAAGGAGGCAAATATCAAAT,Promoter (6-7kb),2,9874702,9890034,15333,2,Gata3-202,-6210,NA,NA,NA,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Promoter,12,21,14462,ENSMUSG00000015619,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg26512254,NA,NA,NA,NA,0.49456888,NA,Hoxa13,Hoxa13_fiveUTR,6,52260793,52260842,52260841,52260842,50,-,AAGACCCCAGTGGCGCTGTTTTAAAAAGCCCCCAAGAAGTGAAGAGCGCG,Promoter (<=1kb),6,52257694,52260803,3110,2,Hoxa13-203,0,Hoxa13-203;Hoxa13-201;Hoxa13-202;Hoxa13-204;Hoxa13-205;Hoxa13-206,Hoxa13;Hoxa13;Hoxa13;Hoxa13;Hoxa13;Hoxa13,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,12,15398,ENSMUSG00000038203,mapped to different genes,6,52259987,52261198,1212,*,1212,176,0.764026403,1.001121681,0.145214521,1.45E-165,CpGisland,TRUE,BivProm1,Low_complexity
cg26556243,-0.145951095,NA,NA,NA,NA,NA,Son,Son_Exon,16,91656312,91656361,91656360,91656361,50,-,CTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCG,"Exon (Son-203/Son, exon 3 of 12)",16,91647506,91679207,31702,1,Son-203,8806,Son-203;Son-204;Son-202;Son-208;Son-201;Son-205;Son-212,Son;Son;Son;Son;Son;Son;Son,0;0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,31,20658,ENSMUSG00000022961,conserved gene and region,16,91656231,91656409,179,*,179,11,0.603351955,0.686780607,0.061452514,1.61E-06,CpGisland,TRUE,TxEx1,
cg26575155,0.386067275,NA,NA,NA,NA,NA,Gm42715,Gm42715_Exon,7,127519592,127519641,127519592,127519593,50,+,CGGCATGACAGGCAGCAATCCTGTGTCCCCTGCCTCATCCAGTTCCCCAG,Promoter (<=1kb),7,127519584,127567054,47471,1,Gm42715-201,8,Gm42715-201;Srcap-203;Srcap-210;Srcap-211;Srcap-202;Srcap-209;Srcap-212;Srcap-204;Srcap-201;Srcap-208;Srcap-207;Srcap-205;Srcap-206;Srcap-214,Gm42715;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap;Srcap,0;0;0;0;0;7480;7291;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,7,7,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg26616840,NA,NA,NA,NA,-1.476860866,NA,Slain1,Slain1_Exon,14,103650445,103650494,103650493,103650494,50,+,AAGCTGCAGGAGCTGGTGCGCAAGCTGGAGAAGCAGAACGAGCAGCTGCG,Promoter (<=1kb),14,103650228,103704907,54680,1,Slain1-201,217,Slain1-201;Slain1-203,Slain1;Slain1,0;-152,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,1,105439,ENSMUSG00000055717,mapped to different genes,14,103650105,103650973,869,*,869,104,0.758342923,0.833819242,0.119677791,8.27E-88,CpGisland,TRUE,,
cg26617601,0.447436831,0.103925106,NA,NA,NA,NA,Nol4l,Nol4l_Exon,2,153529442,153529491,153529442,153529443,50,+,CGAGCCCGTCTTGACCGGCACATACACCACTTGGCCCATCTTGGGTTCCC,Promoter (<=1kb),2,153407462,153529971,122510,2,Nol4l-201,480,Nol4l-201,Nol4l,0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,10,14,329540,ENSMUSG00000061411,conserved gene and region,2,153528543,153530628,2086,*,2086,233,0.761744966,0.771121688,0.111697028,6.66E-188,CpGisland,TRUE,TSS2,
cg26705314,NA,NA,NA,-0.060733739,NA,NA,Fras1,Fras1_Exon,5,96736991,96737040,96736991,96736992,50,-,CGGTGCAGAGGACTGGGAACCTGAACCAATATGCCATCGTCCTGTGTCGC,"Exon (Fras1-201/Fras1, exon 54 of 74)",5,96373955,96784728,410774,1,Fras1-201,363036,Fras1-201,Fras1,0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,1,1,231470,ENSMUSG00000034687,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg26709300,-0.047500378,NA,-0.115877739,NA,NA,NA,Ypel3,Ypel3_Exon,7,126777843,126777892,126777843,126777844,50,+,CGGATTTCAAAGCCCAAGACGTTTCAGGCCTACTTGGATGATTGTCACCG,Promoter (<=1kb),7,126776955,126780514,3560,1,Ypel3-201,888,Gdpd3-201;Gdpd3-203;Tbx6-202;Tbx6-201;Ypel3-201;Ypel3-210;Ypel3-204;Ypel3-209;Ypel3-211;Ypel3-203;Ypel3-207;Ypel3-205;Ypel3-202;Ypel3-208;Ypel3-206,Gdpd3;Gdpd3;Tbx6;Tbx6;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3;Ypel3,11509;9323;-3591;-3591;0;0;0;0;0;0;0;0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,4,66090,ENSMUSG00000042675,conserved gene and region,,,,,,,,,,,,,TRUE,PromF2,
cg26718996,NA,NA,NA,NA,-0.94616082,NA,Tmem178b,Tmem178b_Exon,6,39873373,39873422,39873421,39873422,50,+,CAACTCCACCAACATGGGCCTCTGGAGGAAGTGCCACCGGCAGGGCTTCG,"Exon (Tmem178b-204/Tmem178b, exon 1 of 4)",6,39871461,40245772,374312,1,Tmem178b-204,1912,Tmem178b-204;Tmem178b-203,Tmem178b;Tmem178b,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,4,7,434008,ENSMUSG00000057716,conserved gene and region,6,39873410,39873478,69,*,69,11,0.695652174,1.338624339,0.15942029,4.47E-11,CpGisland,TRUE,BivProm1,
cg26723360,NA,NA,NA,NA,-0.06779945,NA,Lhfpl4,Lhfpl4_Exon,6,113194073,113194122,113194073,113194074,50,+,CGCTGTCGCCCACCCAGTAGGGCTGGATGAAGACCACCACGTTGATGATG,"Exon (Lhfpl4-201/Lhfpl4, exon 2 of 4)",6,113168090,113195384,27295,2,Lhfpl4-201,1262,Lhfpl4-201;Lhfpl4-202,Lhfpl4;Lhfpl4,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,7,7,269788,ENSMUSG00000042873,conserved gene and region,6,113193884,113194365,482,*,482,42,0.668049793,0.8053467,0.087136929,1.49E-29,CpGisland,TRUE,BivProm2,
cg26767614,-0.025656466,NA,-0.27564473,NA,NA,NA,Nfix,Nfix_Exon,8,84771933,84771982,84771981,84771982,50,-,AACAAAATCACCATGACCAGGTCCAGCCGCCACACCTTGTCAGCCTGGCG,"Exon (Nfix-204/Nfix, exon 2 of 11)",8,84704712,84773396,68685,2,Nfix-204,1414,Nfix-204;Nfix-201;Nfix-202;Nfix-203;Nfix-205,Nfix;Nfix;Nfix;Nfix;Nfix,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,20,49,18032,ENSMUSG00000001911,conserved gene but different region,8,84771960,84772433,474,*,474,36,0.61814346,0.805285512,0.075949367,3.03E-23,CpGisland,TRUE,BivProm4,
cg26786582,-0.116145705,NA,NA,NA,NA,NA,Cux2,Cux2_Intron,5,121948350,121948399,121948398,121948399,50,-,TAAAAATAATCAGACATTCTGTGCACCACTGTTTGTTATAACGGTAATCG,"Intron (Cux2-202/Cux2, intron 2 of 22)",5,121856366,122049851,193486,2,Cux2-202,101452,Cux2-202;Cux2-201;Cux2-207;Cux2-205;Cux2-203,Cux2;Cux2;Cux2;Cux2;Cux2,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,15,21,13048,ENSMUSG00000042589,conserved gene and region,5,121948371,121948694,324,*,324,26,0.552469136,1.057228916,0.080246914,1.44E-17,CpGisland,TRUE,EnhA7,
cg26828755,0.025785841,NA,NA,NA,NA,NA,Gria2,Gria2_threeUTR,3,80691380,80691429,80691428,80691429,50,-,TTTGTCCAACAGGCCTTGTTCATTCAGTTTTAGTACTGCGAGGTTAACCG,3' UTR,3,80681450,80802835,121386,2,Gria2-201,111406,Gria2-201;Gria2-202;Gria2-203;Gria2-206,Gria2;Gria2;Gria2;Gria2,0;0;0;0,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,TRUE,FALSE,FALSE,threeUTR,12,19,14800,ENSMUSG00000033981,conserved gene and region,,,,,,,,,,,,,TRUE,TxWk1,
cg26834803,0.331075284,NA,NA,NA,NA,NA,Tfap2d,Tfap2d_Exon,1,19104632,19104681,19104680,19104681,50,+,AGCAGATCCACCACGGGGAGCCCACCGACTTTATTAACCTGCACAATGCG,"Exon (Tfap2d-201/Tfap2d, exon 2 of 8)",1,19103022,19166346,63325,1,Tfap2d-201,1610,Tfap2d-201;Tfap2d-202,Tfap2d;Tfap2d,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,23,226896,ENSMUSG00000042596,conserved gene and region,1,19104477,19104754,278,*,278,20,0.615107914,0.848336894,0.071942446,1.04E-12,CpGisland,TRUE,ReprPC1,
cg26844246,0.016076218,NA,NA,NA,NA,NA,Tlx3,Tlx3_fiveUTR,11,33203551,33203600,33203551,33203552,50,+,CGCACTGAAACTTTGCCAAGAGTGCGCGGGCCCGACAGGCTCTGTGTCAT,Promoter (<=1kb),11,33200752,33203589,2838,2,Tlx3-201,0,Tlx3-201,Tlx3,0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,4,20,27140,ENSMUSG00000040610,conserved gene and region,11,33202715,33203697,983,*,983,96,0.695829095,0.806819251,0.097660224,1.02E-71,CpGisland,TRUE,BivProm2,
cg26879409,NA,NA,NA,NA,-0.307783395,NA,Cacna1a,Cacna1a_Exon,8,84579522,84579571,84579522,84579523,50,-,CGGGTGCTACGACCTCTTAAAACCATCAAGCGGCTGCCAAAGCTCAAGGT,"Exon (Cacna1a-213/Cacna1a, exon 27 of 49)",8,84338639,84640246,301608,1,Cacna1a-213,240883,Cacna1a-213;Cacna1a-201;Cacna1a-202;Cacna1a-211;Cacna1a-203,Cacna1a;Cacna1a;Cacna1a;Cacna1a;Cacna1a,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,12,12286,ENSMUSG00000034656,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg26925489,NA,0.464864825,NA,NA,NA,NA,Hoxc5,Hoxc5_Intron,15,103010060,103010109,103010060,103010061,50,+,CGGCTTCCCTAGAAGAACGGGCGGAGAGAGTTTTTTATGGCCCCATAAAA,"Intron (Hoxc5-202/Hoxc5, intron 1 of 1)",15,102967443,103015676,48234,1,Hoxc5-202,42617,Hoxc5-202;Hoxc5-201;Hoxc6-202;Hoxc6-203;Hoxc6-201,Hoxc5;Hoxc5;Hoxc6;Hoxc6;Hoxc6,0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,46,134,15424,ENSMUSG00000022485,mapped to different genes,15,103009987,103010218,232,*,232,17,0.556034483,0.969041769,0.073275862,5.22E-11,CpGisland,TRUE,BivProm4,
cg26973693,NA,NA,NA,NA,0.186015471,NA,Uncx,Uncx_fiveUTR,5,139543500,139543549,139543500,139543501,50,+,CGCTCAATGTCTCTCTGTAATTGGAGCAACATCACTTTAAAGGTTCAGAG,Promoter (<=1kb),5,139543494,139548179,4686,1,Uncx-201,6,Uncx-201;Uncx-202,Uncx;Uncx,0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,fiveUTR,3,88,22255,ENSMUSG00000029546,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg27002632,NA,NA,-0.019454155,NA,NA,NA,Mapkap1,Mapkap1_Intron,2,34531227,34531276,34531275,34531276,50,-,AGATGGAGAGCCAAGTTACCTCAGAATGATCACTATCGTTAACATTCACG,"Intron (Mapkap1-204/Mapkap1, intron 5 of 10)",2,34406862,34623475,216614,1,Mapkap1-204,124365,Mapkap1-204;Mapkap1-202;Mapkap1-201;Mapkap1-209;Mapkap1-203;Mapkap1-207,Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1;Mapkap1,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,50,59,227743,ENSMUSG00000038696,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh8,
cg27009703,NA,NA,NA,NA,-0.378962947,NA,Hoxa9,Hoxa9_Exon,6,52225922,52225971,52225922,52225923,50,+,CGTCGCCTTGGACTGGAAGCTGCACGGGCTGAAGTCGGGGTGCTCGGCCA,"Exon (Hoxa9-201/Hoxa9, exon 1 of 2)",6,52223100,52227370,4271,2,Hoxa9-201,1399,Hoxa7-204;Hoxa9-201;Hoxa9-203;Hoxa9-202;Hoxa9-204;Hoxa9-205,Hoxa7;Hoxa9;Hoxa9;Hoxa9;Hoxa9;Hoxa9,0;0;0;0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,9,14,15405,ENSMUSG00000038227,mapped to different genes,6,52225670,52226051,382,*,382,36,0.678010471,0.824460432,0.094240838,1.10E-26,CpGisland,TRUE,BivProm1,
cg27050612,-0.032250587,-0.341583532,NA,-0.959028682,NA,NA,Nfe2l1,Nfe2l1_Intron,11,96822820,96822869,96822868,96822869,50,-,GAGAGGAAAATCCCTGCATTTCCAACCACCTGATGCAACCAATGACAACG,"Intron (Nfe2l1-210/Nfe2l1, intron 1 of 3)",11,96817414,96824013,6600,2,Nfe2l1-210,1144,Nfe2l1-210;Nfe2l1-212;Nfe2l1-211;Nfe2l1-201;Nfe2l1-203;Nfe2l1-204;Nfe2l1-202;Nfe2l1-205;Nfe2l1-209;Nfe2l1-206;Nfe2l1-208;Nfe2l1-207,Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1;Nfe2l1,0;0;0;0;0;0;0;0;0;-95;0;6632,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,1,4,18023,ENSMUSG00000038615,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg27070413,-0.908748541,NA,NA,NA,NA,NA,Ube2g1,Ube2g1_Intron,11,72608431,72608480,72608479,72608480,50,-,TTTAGGGGGTTGGCTCCTACTCTGCTAGGACTGTGTGCGCGGAGCATGCG,"Intron (Ube2g1-201/Ube2g1, intron 1 of 5)",11,72607283,72686481,79199,1,Ube2g1-201,1148,Ube2g1-201;Ube2g1-203;Ube2g1-202,Ube2g1;Ube2g1;Ube2g1,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,5,67128,ENSMUSG00000020794,conserved gene and region,11,72608470,72608638,169,*,169,13,0.627218935,0.83219697,0.076923077,8.77E-09,CpGisland,TRUE,PromF4,
cg27070699,-0.812674376,NA,NA,NA,NA,NA,Jade1,Jade1_fiveUTR,3,41563721,41563770,41563721,41563722,50,-,CGCTGCCTAGTGGAAATAATATAATACGTCATTAATATGGCGCCAAAAGA,5' UTR,3,41555731,41616864,61134,1,Jade1-201,7990,Jade1-201;Jade1-210;Jade1-214;Jade1-202;Jade1-209;Jade1-204;Jade1-203;Jade1-211;Jade1-206,Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1;Jade1,0;0;0;0;0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,5,16,269424,ENSMUSG00000025764,conserved gene and region,3,41563390,41564023,634,*,634,81,0.665615142,1.172679942,0.127760252,3.62E-71,CpGisland,TRUE,PromF4,
cg27145887,0.11162696,NA,NA,NA,NA,NA,Ipo11,Ipo11_Exon,13,106879674,106879723,106879722,106879723,50,-,GACTTGAATTTCACAGAAATCCACTGACCGATGAGCCAAATCACCCTGCG,"Exon (Ipo11-204/Ipo11, exon 15 of 30)",13,106794439,106925150,130712,2,Ipo11-204,45427,Ipo11-204;Ipo11-201;Ipo11-203,Ipo11;Ipo11;Ipo11,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,2,2,76582,ENSMUSG00000042590,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg27201382,NA,0.852140677,NA,NA,0.387754384,1.925122578,Bdnf,Bdnf_fiveUTR,2,109676257,109676306,109676257,109676258,50,-,CGCTGAAGTTGGCTTCCTAGCGGTGTAGGCTGGAATAGACTCTTGGCAAG,5' UTR,2,109674700,109727007,52308,1,Bdnf-201,1557,Bdnf-201;Bdnf-207;Bdnf-208;Bdnf-210;Bdnf-206,Bdnf;Bdnf;Bdnf;Bdnf;Bdnf,0;0;0;0;0,TRUE,FALSE,FALSE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,8,18,12064,ENSMUSG00000048482,conserved gene and region,2,109676012,109676311,300,*,300,19,0.566666667,0.795978215,0.063333333,4.10E-11,CpGisland,TRUE,BivProm2,
cg27205180,0.266383941,NA,NA,NA,NA,NA,Nbea,Nbea_Intron,3,55742813,55742862,55742813,55742814,50,+,CGGCTGTCCCCATCCTGTCAGGCATGTCAGGAAATGACAAGCACTGGGGA,"Intron (Nbea-201/Nbea, intron 41 of 57)",3,55625195,56183701,558507,2,Nbea-201,440839,Nbea-201;Nbea-208,Nbea;Nbea,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,14,26422,ENSMUSG00000027799,conserved gene and region,,,,,,,,,,,,,TRUE,EnhWk3,
cg27256262,NA,NA,NA,NA,0.702898147,NA,Klhl14,Klhl14_Exon,18,21651786,21651835,21651786,21651787,50,+,CGATCTTGCACACCTGCTTGTAGTTCTGCACCGAGATCTGGTCGTTGAGG,Promoter (<=1kb),18,21550377,21652368,101992,2,Klhl14-201,533,Klhl14-201;Klhl14-202,Klhl14;Klhl14,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,14,38,225266,ENSMUSG00000042514,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg27257233,NA,NA,NA,NA,-1.295657613,NA,Gm13668,Gm13668_Intergenic_upstream,2,74129222,74129271,74129270,74129271,50,-,TCAAATGTGTTTAGTGCACCAAATCTCCTGGAGCCTTCAGCCAGGCAGCG,Distal Intergenic,2,73959669,73960669,1001,2,Gm13668-201,-168602,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,18,20,667729,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg27263887,NA,NA,NA,0.015470809,NA,NA,Gm12074,Gm12074_Intergenic_upstream,11,26962217,26962266,26962265,26962266,50,-,GAAGCGATTAAGTCTGCTTTACTGAGTGGGCATGAAATGGCCAACCTTCG,Distal Intergenic,11,27051697,27051915,219,1,Gm12074-201,-89480,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,10,10,100042367,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg27303748,-0.875866492,-0.30351393,NA,NA,NA,NA,Ctnnd1,Ctnnd1_Exon,2,84616690,84616739,84616690,84616691,50,+,CGTCAGTCTTCACCTTGTCATTGCGGTAGCATAAGTGTTGCAGGTATGCA,"Exon (Ctnnd1-204/Ctnnd1, exon 5 of 18)",2,84600071,84650745,50675,2,Ctnnd1-204,34006,Ctnnd1-204;Ctnnd1-206;Ctnnd1-207;Ctnnd1-208;Ctnnd1-209;Ctnnd1-216;Ctnnd1-220;Ctnnd1-221;Ctnnd1-222;Ctnnd1-224;Ctnnd1-203;Ctnnd1-211;Ctnnd1-212;Ctnnd1-213;Ctnnd1-214;Ctnnd1-215;Ctnnd1-218;Ctnnd1-219;Ctnnd1-210;Ctnnd1-205;Ctnnd1-223;Ctnnd1-201;Ctnnd1-202;Ctnnd1-228;Ctnnd1-217;Ctnnd1-226;Gm28635-201,Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Ctnnd1;Gm28635,0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;0;-4112;0,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,4,12388,ENSMUSG00000034101,mapped to different genes,,,,,,,,,,,,,TRUE,TxEnh4,
cg27370397,NA,NA,NA,NA,NA,0.145082339,Tle4,Tle4_Intron,19,14590380,14590429,14590380,14590381,50,+,CGATTGATTTGCTGTCGAGCATGGTAAATTAATAGCAACAAATTGCTGAG,"Intron (Tle4-201/Tle4, intron 4 of 19)",19,14448150,14598051,149902,2,Tle4-201,7622,Tle4-201;Tle4-202;Tle4-203,Tle4;Tle4;Tle4,0;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,12,29,21888,ENSMUSG00000024642,conserved gene and region,,,,,,,,,,,,,TRUE,TxEnh3,
cg27393099,NA,NA,-0.192894635,NA,-0.206241051,NA,Dmrta2,Dmrta2_Intergenic_downstream,4,109984349,109984398,109984349,109984350,50,-,CGCCAGGCAGTGAAACTTAATAGCAGGACAAGAAAACGGTTTAATAAAGA,Downstream (<1kb),4,109978053,109983687,5635,1,Dmrta2-201,6345,Dmrta2-201,Dmrta2,0,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,Intergenic_downstream,4,13,242620,ENSMUSG00000047143,conserved gene and region,,,,,,,,,,,,,TRUE,BivProm2,
cg27419851,NA,NA,NA,NA,-0.338732351,NA,Dmrt3,Dmrt3_Promoter,19,25604587,25604636,25604587,25604588,50,-,CGGTATCGATTGATCCTGATATATCACAGAAATTTACTGTCACTTCTGTT,Promoter (5-6kb),19,25610301,25610867,567,1,Dmrt3-202,-5714,Dmrt1-201;Dmrt1-202,Dmrt1;Dmrt1,0;0,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,Promoter,3,5,240590,ENSMUSG00000042372,conserved gene and region,,,,,,,,,,,,,TRUE,ReprPC2,
cg27430422,0.434900839,NA,NA,NA,NA,NA,Taf15,Taf15_Exon,11,83488999,83489048,83488999,83489000,50,+,CGTGGGGGATATGACAAGGATGGAAGAGGTCCTATGACAGGATCAAGGTA,Promoter (<=1kb),11,83489027,83506743,17717,1,Taf15-203,0,Taf15-204;Taf15-201;Taf15-202;Taf15-203,Taf15;Taf15;Taf15;Taf15,0;0;0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,2,2,70439,ENSMUSG00000020680,conserved gene and region,,,,,,,,,,,,,TRUE,TxEx1,
cg27435767,-0.008846821,NA,NA,NA,NA,NA,Gm12024,Gm12024_Intron,11,18754542,18754591,18754542,18754543,50,+,CGTTTTTAAATGAAGATATTTAAAATGTACCCCATATTTCAGCATGTTGC,"Intron (Gm28401-202/Gm28401-202, intron 2 of 2)",11,18577227,18578479,1253,2,Gm12024-201,-176063,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,2,12,100417654,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA17,
cg27446026,NA,NA,0.61817447,NA,NA,NA,Tle3,Tle3_Intron,9,61121119,61121168,61121119,61121120,50,-,CGATTTTATGGCAGAGCTCATAACAGAGGTAATTTGCTGAAAATGTTCAG,"Intron (Gm33914-201/Gm33914-201, intron 2 of 6)",9,61372366,61418497,46132,1,Tle3-218,-251247,NA,NA,NA,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,3,30,21887,ENSMUSG00000032280,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm4,
cg27456337,NA,NA,-0.228241592,NA,NA,NA,Pcf11,Pcf11_Exon,7,92644693,92644742,92644693,92644694,50,-,CGTTTTTGACAATGTTCAACATAATATTCAAGGGGTTTTCAACTGGTGTC,"Exon (Pcf11-201/Pcf11, exon 16 of 16)",7,92643543,92669934,26392,2,Pcf11-201,25192,Pcf11-201;Pcf11-203;Pcf11-202,Pcf11;Pcf11;Pcf11,0;0;3467,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,8,8,74737,ENSMUSG00000041328,mapped to different genes,,,,,,,,,,,,,TRUE,Tx7,
cg27487378,NA,0.087341788,NA,NA,NA,NA,Dysf,Dysf_Intron,6,84120034,84120083,84120082,84120083,50,+,TTCGTATTATTCTTTTTCCAGCTAATATCCTGGCATTTCCAAAGACACCG,"Intron (Dysf-204/Dysf, intron 30 of 54)",6,84008590,84211060,202471,1,Dysf-204,111444,Dysf-204;Dysf-205;Dysf-213;Dysf-215;Dysf-210;Dysf-211;Dysf-212;Dysf-214;Dysf-216;Dysf-202;Dysf-203;Dysf-201;Dysf-209,Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf;Dysf,0;0;0;0;0;0;0;0;0;0;0;0;13483,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,13,15,26903,ENSMUSG00000033788,conserved gene and region,,,,,,,,,,,,,TRUE,EnhA2,
cg27487401,NA,NA,NA,NA,-0.310883501,NA,Gm13418,Gm13418_Intergenic_downstream,2,24521706,24521755,24521706,24521707,50,+,CGCTCACGGAGCTCTTTAAGATAAATGAGCAAAATTAAGAGACTCACTGG,Distal Intergenic,2,24494068,24495011,944,1,Gm13418-201,27638,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,2,2,433410,NA,mapped to different genes,2,24521623,24521713,91,*,91,12,0.747252747,0.952048823,0.131868132,5.70E-11,CpGisland,TRUE,,
cg27487607,NA,NA,NA,NA,0.506691526,NA,Fgfr2,Fgfr2_Intron,7,131542586,131542635,131542634,131542635,50,+,CCCCGCATTTAACTTGGATGACATTTTGATTTCATCATTAGCATCCGGCG,"Intron (Fgfr2-217/Fgfr2, intron 2 of 6)",7,130162451,133123350,2960900,2,Fgfr2-217,1580715,Fgfr2-217;Hmx3-201,Fgfr2;Hmx3,0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,58,79,14183,ENSMUSG00000030849,mapped to different genes,7,131542631,131543412,782,*,782,92,0.739130435,0.916717635,0.117647059,5.66E-77,CpGisland,TRUE,BivProm1,
cg27489284,NA,-0.173468101,NA,NA,NA,NA,Gm9287,Gm9287_Intergenic_downstream,14,97068898,97068947,97068946,97068947,50,-,AAATGCTTGAGACTTTGCCAGCTTTCAACTAACAAGCCAGGTTATTAACG,Distal Intergenic,14,96967825,96969754,1930,1,Gm9287-201,101122,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_downstream,5,6,668654,NA,mapped to different genes,,,,,,,,,,,,,TRUE,Quies2,D?
cg27496468,0.328758487,NA,NA,NA,1.591036745,NA,Nr2e1,Nr2e1_Intron,10,42579761,42579810,42579809,42579810,50,+,TGCCTATAGAGCCACCAGTGACCCGTCAAAAAGAGTAGCATGGGAATTCG,"Intron (Nr2e1-201/Nr2e1, intron 1 of 8)",10,42561963,42583632,21670,2,Nr2e1-201,3822,Nr2e1-201;Nr2e1-203;Nr2e1-204;Ostm1-204;Ostm1-202;Ostm1-203,Nr2e1;Nr2e1;Nr2e1;Ostm1;Ostm1;Ostm1,0;0;0;-4012;0;0,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Intron,5,11,21907,ENSMUSG00000019803,conserved gene and region,10,42579451,42579891,441,*,441,35,0.68707483,0.680555556,0.079365079,2.77E-23,CpGisland,TRUE,,
cg27556193,0.024857677,NA,NA,NA,NA,NA,Otx1,Otx1_fiveUTR,11,22001601,22001650,22001649,22001650,50,+,TGATGAAGATTGATCACCTTTCTACTGCCCTCCCCGGGTATGTGAACGCG,Promoter (<=1kb),11,21994764,22001615,6852,2,Otx1-201,0,Ehbp1-201;Ehbp1-202;Ehbp1-207;Otx1-201;Otx1-203;Otx1-202,Ehbp1;Ehbp1;Ehbp1;Otx1;Otx1;Otx1,0;0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,4,13,18423,ENSMUSG00000005917,conserved gene but different region,11,22001635,22002065,431,*,431,50,0.728538283,0.874416717,0.116009281,9.57E-42,CpGisland,TRUE,TSS2,
cg27563760,NA,NA,0.009116775,NA,NA,NA,Maz,Maz_Exon,7,127024892,127024941,127024892,127024893,50,+,CGTTCTGTTGAGTGCACTTGTCTGACGTGACTGTTGAGGTGATCCGGCCT,"Exon (Maz-203/Maz, exon 3 of 6)",7,127022130,127026526,4397,2,Maz-203,1585,Gm42742-201;Gm42742-203;Gm42742-204;Gm42742-202;Kif22-202;Kif22-201;Kif22-205;Kif22-206;Maz-203;Maz-201;Maz-204;Maz-202;Maz-206;Maz-205;Prrt2-201;Prrt2-202;Prrt2-204;Prrt2-205;Prrt2-206;Prrt2-207,Gm42742;Gm42742;Gm42742;Gm42742;Kif22;Kif22;Kif22;Kif22;Maz;Maz;Maz;Maz;Maz;Maz;Prrt2;Prrt2;Prrt2;Prrt2;Prrt2;Prrt2,0;0;0;0;4016;17530;3175;7763;0;0;0;0;0;0;0;0;-4990;-3936;-3755;-4537,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,16,17,17188,ENSMUSG00000030678,conserved gene but different region,,,,,,,,,,,,,TRUE,,
cg27589919,NA,-1.056453012,NA,NA,NA,NA,Dll1,Dll1_Promoter,17,15376107,15376156,15376155,15376156,50,-,TGGATCGCCAAATGGTCAGTGAGCTGTAAAATGTGCAACCCTCCTCCCCG,Promoter (<=1kb),17,15374794,15376872,2079,2,Dll1-205,716,Dll1-201;Dll1-206;Dll1-203;Dll1-202;Dll1-205,Dll1;Dll1;Dll1;Dll1;Dll1,-131;-4276;-2035;-1007;0,TRUE,FALSE,TRUE,FALSE,FALSE,FALSE,TRUE,FALSE,FALSE,Promoter,9,9,13388,ENSMUSG00000014773,conserved gene but different region,17,15376155,15376502,348,*,348,34,0.683908046,0.896363636,0.097701149,8.61E-26,CpGisland,TRUE,BivProm1,Low_complexity
cg27596519,NA,NA,NA,NA,0.281775124,NA,Usp21,Usp21_Exon,1,171283632,171283681,171283680,171283681,50,+,TCCCACCTTGGGGATGGGCAGGGACAGGTCACAAAAAACCTCGAAGGTCG,"Exon (Usp21-201/Usp21, exon 8 of 13)",1,171281945,171287991,6047,2,Usp21-201,4310,Ppox-207;Ppox-201;Ppox-206;Ppox-208;Ppox-202;Ppox-204;Ppox-205;Ppox-203;Ufc1-201;Ufc1-203;Usp21-201;Usp21-202;Usp21-208;Usp21-210;Usp21-203;Usp21-207;Usp21-205;Usp21-204;Usp21-209;Usp21-206;Usp21-211;Usp21-212,Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ppox;Ufc1;Ufc1;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21;Usp21,-2446;-2446;-2446;-2872;-3805;-3110;-2446;-2513;11343;6759;0;0;-726;0;0;-465;0;0;0;0;0;3125,TRUE,FALSE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,Exon,4,4,30941,ENSMUSG00000053483,conserved gene and region,,,,,,,,,,,,,TRUE,,
cg27597956,NA,NA,NA,NA,-0.663090907,NA,Pax6,Pax6_fiveUTR,2,105668893,105668942,105668941,105668942,50,-,AGCACCCTCTTTTCTTATCATTGACATTTAAACTCTGGGGCAGGTCCTCG,Promoter (<=1kb),2,105668900,105697364,28465,1,Pax6-206,0,Pax6-206;Pax6-207;Pax6-210;Pax6-214;Pax6-208,Pax6;Pax6;Pax6;Pax6;Pax6,0;0;0;0;0,TRUE,FALSE,TRUE,TRUE,FALSE,TRUE,TRUE,FALSE,FALSE,fiveUTR,15,78,18508,ENSMUSG00000027168,mapped to different genes,2,105668770,105669154,385,*,385,27,0.594805195,0.805813953,0.07012987,1.13E-16,CpGisland,TRUE,BivProm1,
cg27650369,NA,NA,NA,NA,0.260313627,NA,Gm48316,Gm48316_Intergenic_upstream,13,94706728,94706777,94706728,94706729,50,-,CGCCAGTCCTATCCTGCAGAAAGCCTTTAGCCCTGATGGCAGATGATTCT,Distal Intergenic,13,94752270,94752593,324,1,Gm48316-201,-45542,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,36,42,NA,NA,mapped to different genes,,,,,,,,,,,,,TRUE,BivProm3,
cg27652147,NA,NA,-0.373123728,NA,NA,NA,Mycn,Mycn_threeUTR,12,12936500,12936549,12936548,12936549,50,-,GAGGTATTATTACAGTACTTAGGTATGAACTTCCAGTCTAATACTGGCCG,3' UTR,12,12936093,12941914,5822,2,Mycn-201,5365,Mycn-201;Mycn-202;Mycn-203,Mycn;Mycn;Mycn,0;0;5276,TRUE,FALSE,FALSE,FALSE,TRUE,TRUE,FALSE,FALSE,FALSE,threeUTR,2,3,18109,ENSMUSG00000037169,mapped to different genes,,,,,,,,,,,,,TRUE,,
cg27699373,NA,NA,NA,NA,-0.000479108,NA,Twist2,Twist2_Exon,1,91801943,91801992,91801943,91801944,50,+,CGCTCAAGCTGGCCGCCAGGTACATAGACTTCCTCTACCAGGTCCTGCAG,Promoter (<=1kb),1,91801461,91848028,46568,1,Twist2-201,482,Twist2-201;Twist2-202,Twist2;Twist2,0;0,TRUE,FALSE,TRUE,FALSE,FALSE,TRUE,FALSE,FALSE,FALSE,Exon,1,2,13345,ENSMUSG00000007805,conserved gene and region,1,91801708,91802242,535,*,535,55,0.652336449,0.967672981,0.102803738,1.09E-42,CpGisland,TRUE,PromF5,
cg27702216,-0.194540444,NA,NA,NA,NA,NA,Rpl36-ps3,Rpl36-ps3_Intergenic_upstream,12,12725223,12725272,12725223,12725224,50,-,CGTCCATTCAGATCCATCACCCTGAGATAAACTGTGAATATTGCCCTTTG,Distal Intergenic,12,12912022,12912336,315,1,Rpl36-ps3-201,-186799,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,19,20,100043215,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA18,
cg27704080,-0.293896408,NA,NA,NA,NA,NA,Rpl36-ps3,Rpl36-ps3_Intergenic_upstream,12,12725229,12725278,12725277,12725278,50,+,TTCAGATCCATCACCCTGAGATAAACTGTGAATATTGCCCTTTGTCGCCG,Distal Intergenic,12,12912022,12912336,315,1,Rpl36-ps3-201,-186744,NA,NA,NA,FALSE,TRUE,FALSE,FALSE,FALSE,FALSE,FALSE,FALSE,TRUE,Intergenic_upstream,19,20,100043215,NA,mapped to different genes,,,,,,,,,,,,,TRUE,EnhA18,