Sample Name Raw PE(#) Combined(#) Qualified(#) Nochime(#) Base(nt) AvgLen(nt) Q20 Q30 GC% Effective% MS2.7.2 "96,102" "95,186" "94,806" "67,553" "17,087,790" 253 99.22 97.7 52.92 70.29 MS2.8.2 "95,589" "94,663" "94,278" "69,010" "17,451,890" 253 99.27 97.88 53.39 72.19 MS1.1.2 "80,317" "79,298" "78,940" "65,432" "16,546,319" 253 99.17 97.68 50.65 81.47 MS1.3.2 "93,926" "92,707" "92,270" "63,310" "16,014,029" 253 99.39 98.16 53.96 67.4 MS1.2.2 "95,878" "94,764" "94,201" "61,079" "15,454,975" 253 99.5 98.31 53.96 63.7 MS3.14.2 "96,845" "92,084" "91,052" "62,334" "16,045,437" 257 99.5 98.29 55.11 64.36 MS3.12.2 "87,998" "85,140" "84,165" "65,486" "16,666,201" 255 99.41 98.05 53.88 74.42 MS3.17.2 "85,560" "84,442" "83,903" "65,796" "16,648,576" 253 99.46 98.13 54.43 76.9 MS2.16.2 "93,872" "92,243" "91,620" "67,763" "17,231,096" 254 99.41 98.04 50.3 72.19 MS2.20.2 "89,785" "88,327" "87,748" "68,665" "17,412,181" 254 99.52 98.34 54.4 76.48 MS2.15.2 "94,796" "92,720" "92,208" "66,234" "16,812,916" 254 99.48 98.22 55.15 69.87 MS2.11.2 "97,065" "95,371" "94,741" "66,621" "16,855,201" 253 99.5 98.25 53.87 68.64 MS2.18.2 "82,201" "80,987" "80,421" "69,493" "17,578,857" 253 99.49 98.29 55.89 84.54 MS2.17.2 "93,953" "92,539" "91,902" "67,169" "16,985,531" 253 99.4 98.06 54.81 71.49 MS1.10.2 "93,603" "92,129" "91,531" "61,620" "15,574,401" 253 99.4 97.97 53.44 65.83 MS1.20.2 "98,586" "97,180" "96,411" "63,652" "16,101,489" 253 99.32 97.8 53.1 64.56 MS1.15.2 "97,162" "96,041" "95,444" "66,710" "16,869,979" 253 99.42 98.08 53.9 68.66 MS1.17.2 "88,204" "87,045" "86,486" "61,607" "15,586,002" 253 99.4 98.01 52.06 69.85 MS1.18.2 "87,406" "86,275" "85,627" "63,770" "16,142,789" 253 99.42 98.08 52.72 72.96 MS1.16.2 "83,733" "82,583" "82,023" "66,471" "16,811,783" 253 99.39 97.98 51.72 79.38 MS3.6.2 "85,349" "83,780" "83,267" "69,445" "17,567,881" 253 99.34 97.86 50.73 81.37 MS1.12.2 "82,131" "80,888" "80,358" "65,319" "16,520,492" 253 99.4 98 55.02 79.53 MS1.11.2 "90,098" "88,954" "88,420" "69,216" "17,506,696" 253 99.46 98.14 54.4 76.82 MS3.7.2 "97,204" "95,935" "95,381" "62,310" "15,761,821" 253 99.44 98.12 52.02 64.1 MS1.19.2 "85,245" "84,000" "83,514" "64,133" "16,222,302" 253 99.49 98.24 52.03 75.23 MS1.13.2 "80,745" "79,396" "79,007" "60,920" "15,408,881" 253 99.51 98.27 54.13 75.45 MS1.14.2 "90,381" "89,175" "88,541" "62,416" "15,785,727" 253 99.42 98.06 54.33 69.06 MS2.4.2 "83,308" "81,518" "80,818" "66,474" "16,812,383" 253 99.51 98.31 53.72 79.79 MS3.13.2 "87,333" "85,203" "84,492" "67,040" "16,953,606" 253 99.49 98.26 52.86 76.76 MS3.9.2 "82,836" "81,837" "81,324" "68,925" "17,434,978" 253 99.6 98.61 55 83.21 MS3.11.2 "87,208" "85,410" "84,672" "64,671" "16,354,916" 253 99.51 98.29 53.41 74.16 MS2.14.2 "98,868" "97,265" "96,762" "68,159" "17,233,999" 253 99.46 98.19 52.62 68.94 MS2.10.2 "97,888" "96,672" "96,166" "62,464" "15,795,509" 253 99.51 98.37 55.12 63.81 MS2.6.2 "82,489" "81,477" "80,979" "63,217" "15,983,747" 253 99.55 98.41 55.17 76.64 MS2.13.2 "93,090" "91,443" "90,925" "64,838" "16,392,301" 253 99.27 97.97 54.52 69.65 MS2.12.2 "97,324" "95,833" "95,336" "69,912" "17,680,166" 253 99.33 98 53.77 71.83 MS2.19.2 "83,551" "81,948" "81,476" "61,643" "15,601,000" 253 99.36 98.14 55.24 73.78 MS2.5.2 "99,198" "96,773" "95,956" "60,993" "15,941,565" 261 99.32 97.76 53.67 61.49 MS2.3.2 "84,529" "82,003" "81,348" "68,491" "17,333,097" 253 99.23 97.82 54.67 81.03 MS3.8.2 "83,598" "82,168" "81,714" "63,982" "16,185,040" 253 99.24 97.79 52.27 76.54 MS1.7.2 "96,302" "94,601" "94,159" "68,430" "17,305,004" 253 99.22 97.78 51.18 71.06 MS1.6.2 "89,903" "88,423" "87,936" "61,886" "15,649,612" 253 99.28 97.9 52.81 68.84 MS3.16.2 "83,054" "81,914" "81,519" "62,291" "15,744,997" 253 99.26 97.87 53.89 75 MS2.1.2 "92,912" "91,771" "91,250" "69,549" "17,592,962" 253 99.34 98.05 53.62 74.85 MS1.8.2 "97,357" "96,021" "95,537" "68,164" "17,242,450" 253 99.27 97.85 54.66 70.01 MS3.1.2 "92,540" "91,792" "91,473" "61,460" "15,546,135" 253 99.25 97.85 51.46 66.41 MS1.9.2 "89,068" "87,715" "87,209" "63,867" "16,148,217" 253 99.16 97.68 51.86 71.71 MS3.20.2 "86,493" "85,386" "84,926" "64,388" "16,286,242" 253 99.31 97.92 55.18 74.44 MS3.15.2 "91,017" "89,700" "89,267" "66,163" "16,740,447" 253 99.33 98.02 54.79 72.69 MS3.18.2 "83,120" "81,988" "81,625" "61,932" "15,669,033" 253 99.33 98.02 55.35 74.51 MS3.2.2 "86,449" "85,064" "84,561" "60,375" "15,270,209" 253 99.09 97.51 52.62 69.84 MS3.4.2 "86,202" "84,938" "84,509" "68,150" "17,248,113" 253 99.28 97.95 53.95 79.06 MS1.4.2 "80,152" "78,727" "78,286" "59,982" "15,162,177" 253 99.3 97.95 53.5 74.84 MS3.3.2 "85,807" "84,477" "84,001" "65,364" "16,508,059" 253 99.28 97.91 53.66 76.18 MS3.10.2 "86,416" "85,262" "84,868" "60,410" "15,265,296" 253 99.32 98 54.67 69.91 MS2.9.2 "93,828" "92,825" "92,361" "67,283" "17,016,990" 253 99.33 98 54.44 71.71 MS3.19.2 "85,609" "84,681" "84,331" "64,804" "16,397,300" 253 99.25 97.89 56.13 75.7 MS1.5.2 "82,598" "81,061" "80,618" "59,334" "14,998,415" 253 99.48 98.3 53.49 71.83 MS3.5.2 "90,787" "89,097" "88,573" "68,054" "17,212,743" 253 99.45 98.23 53.85 74.96 MS2.2.2 "98,067" "96,294" "95,830" "63,555" "16,043,448" 252 99.46 98.23 52.36 64.81