"Table 2S. Detailed clinical information for the 148 CN-AML samples from GEO dataset (GSE12417, GPL96)" Title Geo_accession Source_name_ch1 Characteristics_ch1 Treatment_protocol_ch1 Molecule_ch1 Extract_protocol_ch1 Label_ch1 Label_protocol_ch1 Hyb_protocol Scan_protocol Subtype Age OS(days) Status (0=alive/1=dead): CN_AML Patient 62 (U133A) GSM311659 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =48 years; OS = 31 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =48 years 31 1 CN_AML Patient 127 (U133A) GSM311724 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =59 years; OS = 31 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =59 years 31 1 CN_AML Patient 25 (U133A) GSM311622 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =61 years; OS = 33 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =61 years 33 1 CN_AML Patient 98 (U133A) GSM311695 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =40 years; OS = 33 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =40 years 33 1 CN_AML Patient 79 (U133A) GSM311676 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =67 years; OS = 39 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =67 years 39 1 CN_AML Patient 9 (U133A) GSM311606 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =48 years; OS = 41 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =48 years 41 1 CN_AML Patient 65 (U133A) GSM311662 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =81 years; OS = 41 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =81 years 41 1 CN_AML Patient 78 (U133A) GSM311675 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =71 years; OS = 41 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =71 years 41 1 CN_AML Patient 142 (U133A) GSM311739 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =75 years; OS = 41 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =75 years 41 1 CN_AML Patient 61 (U133A) GSM311658 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =26 years; OS = 44 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =26 years 44 1 CN_AML Patient 47 (U133A) GSM311644 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =65 years; OS = 47 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =65 years 47 1 CN_AML Patient 80 (U133A) GSM311677 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =75 years; OS = 50 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =75 years 50 1 CN_AML Patient 11 (U133A) GSM311608 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =55 years; OS = 51 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =55 years 51 1 CN_AML Patient 117 (U133A) GSM311714 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =39 years; OS = 51 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =39 years 51 0 CN_AML Patient 159 (U133A) GSM311756 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =53 years; OS = 51 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =53 years 51 1 CN_AML Patient 74 (U133A) GSM311671 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M0; age =52 years; OS = 56 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M0" age =52 years 56 1 CN_AML Patient 53 (U133A) GSM311650 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =49 years; OS = 61 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =49 years 61 1 CN_AML Patient 96 (U133A) GSM311693 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =78 years; OS = 62 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =78 years 62 1 CN_AML Patient 21 (U133A) GSM311618 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =66 years; OS = 72 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =66 years 72 0 CN_AML Patient 30 (U133A) GSM311627 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =54 years; OS = 75 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =54 years 75 1 CN_AML Patient 82 (U133A) GSM311679 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =58 years; OS = 77 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =58 years 77 1 CN_AML Patient 135 (U133A) GSM311732 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =24 years; OS = 79 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =24 years 79 1 CN_AML Patient 63 (U133A) GSM311660 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =69 years; OS = 86 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =69 years 86 1 CN_AML Patient 97 (U133A) GSM311694 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =75 years; OS = 91 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =75 years 91 1 CN_AML Patient 2 (U133A) GSM311599 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =59 years; OS = 104 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =59 years 104 0 CN_AML Patient 45 (U133A) GSM311642 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =46 years; OS = 105 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =46 years 105 1 CN_AML Patient 88 (U133A) GSM311685 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =49 years; OS = 107 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =49 years 107 1 CN_AML Patient 56 (U133A) GSM311653 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =54 years; OS = 109 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =54 years 109 1 CN_AML Patient 55 (U133A) GSM311652 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =66 years; OS = 113 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =66 years 113 1 CN_AML Patient 119 (U133A) GSM311716 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =67 years; OS = 114 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =67 years 114 0 CN_AML Patient 46 (U133A) GSM311643 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =43 years; OS = 119 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =43 years 119 1 CN_AML Patient 72 (U133A) GSM311669 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =62 years; OS = 123 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =62 years 123 1 CN_AML Patient 75 (U133A) GSM311672 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =69 years; OS = 124 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =69 years 124 1 CN_AML Patient 123 (U133A) GSM311720 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =83 years; OS = 127 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =83 years 127 1 CN_AML Patient 136 (U133A) GSM311733 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =67 years; OS = 137 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =67 years 137 1 CN_AML Patient 128 (U133A) GSM311725 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =65 years; OS = 148 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =65 years 148 1 CN_AML Patient 83 (U133A) GSM311680 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =67 years; OS = 157 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =67 years 157 1 CN_AML Patient 89 (U133A) GSM311686 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =53 years; OS = 175 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =53 years 175 1 CN_AML Patient 162 (U133A) GSM311759 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =79 years; OS = 175 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =79 years 175 1 CN_AML Patient 102 (U133A) GSM311699 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =72 years; OS = 176 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =72 years 176 1 CN_AML Patient 112 (U133A) GSM311709 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =61 years; OS = 184 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =61 years 184 1 CN_AML Patient 17 (U133A) GSM311614 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =48 years; OS = 190 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =48 years 190 1 CN_AML Patient 19 (U133A) GSM311616 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =25 years; OS = 190 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =25 years 190 1 CN_AML Patient 144 (U133A) GSM311741 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =69 years; OS = 192 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =69 years 192 1 CN_AML Patient 59 (U133A) GSM311656 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =40 years; OS = 205 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =40 years 205 1 CN_AML Patient 16 (U133A) GSM311613 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =49 years; OS = 209 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =49 years 209 0 CN_AML Patient 147 (U133A) GSM311744 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =62 years; OS = 209 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =62 years 209 0 CN_AML Patient 24 (U133A) GSM311621 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =62 years; OS = 214 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =62 years 214 1 CN_AML Patient 23 (U133A) GSM311620 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =64 years; OS = 223 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =64 years 223 1 CN_AML Patient 158 (U133A) GSM311755 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =61 years; OS = 223 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =61 years 223 1 CN_AML Patient 104 (U133A) GSM311701 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =55 years; OS = 229 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =55 years 229 1 CN_AML Patient 149 (U133A) GSM311746 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =65 years; OS = 233 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =65 years 233 1 CN_AML Patient 69 (U133A) GSM311666 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =71 years; OS = 236 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =71 years 236 1 CN_AML Patient 87 (U133A) GSM311684 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =45 years; OS = 238 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =45 years 238 1 CN_AML Patient 29 (U133A) GSM311626 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =74 years; OS = 240 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =74 years 240 1 CN_AML Patient 42 (U133A) GSM311639 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =50 years; OS = 247 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =50 years 247 1 CN_AML Patient 90 (U133A) GSM311687 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =40 years; OS = 250 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =40 years 250 1 CN_AML Patient 100 (U133A) GSM311697 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =44 years; OS = 251 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =44 years 251 1 CN_AML Patient 60 (U133A) GSM311657 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =70 years; OS = 252 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =70 years 252 1 CN_AML Patient 12 (U133A) GSM311609 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =52 years; OS = 253 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =52 years 253 1 CN_AML Patient 76 (U133A) GSM311673 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =60 years; OS = 256 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =60 years 256 1 CN_AML Patient 38 (U133A) GSM311635 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M0; age =62 years; OS = 257 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M0" age =62 years 257 1 CN_AML Patient 48 (U133A) GSM311645 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =73 years; OS = 260 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =73 years 260 1 CN_AML Patient 105 (U133A) GSM311702 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =68 years; OS = 263 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =68 years 263 1 CN_AML Patient 108 (U133A) GSM311705 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =38 years; OS = 271 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =38 years 271 1 CN_AML Patient 5 (U133A) GSM311602 bone marrow mononuclear cells "MDS RAEB, normal karyotype (training set) MDS RAEB; age =61 years; OS = 275 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "MDS RAEB, normal karyotype (training set) MDS RAEB" age =61 years 275 0 CN_AML Patient 4 (U133A) GSM311601 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =66 years; OS = 280 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =66 years 280 0 CN_AML Patient 70 (U133A) GSM311667 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =49 years; OS = 280 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =49 years 280 1 CN_AML Patient 51 (U133A) GSM311648 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =52 years; OS = 283 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =52 years 283 1 CN_AML Patient 130 (U133A) GSM311727 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =74 years; OS = 284 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =74 years 284 1 CN_AML Patient 66 (U133A) GSM311663 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =47 years; OS = 285 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =47 years 285 0 CN_AML Patient 54 (U133A) GSM311651 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =72 years; OS = 289 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =72 years 289 1 CN_AML Patient 92 (U133A) GSM311689 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =71 years; OS = 289 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =71 years 289 0 CN_AML Patient 43 (U133A) GSM311640 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =33 years; OS = 293 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =33 years 293 1 CN_AML Patient 14 (U133A) GSM311611 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =54 years; OS = 294 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =54 years 294 1 CN_AML Patient 138 (U133A) GSM311735 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =66 years; OS = 304 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =66 years 304 1 CN_AML Patient 101 (U133A) GSM311698 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =53 years; OS = 314 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =53 years 314 1 CN_AML Patient 18 (U133A) GSM311615 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =26 years; OS = 317 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =26 years 317 0 CN_AML Patient 73 (U133A) GSM311670 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =27 years; OS = 321 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =27 years 321 1 CN_AML Patient 137 (U133A) GSM311734 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =36 years; OS = 326 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =36 years 326 1 CN_AML Patient 94 (U133A) GSM311691 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =20 years; OS = 340 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =20 years 340 1 CN_AML Patient 143 (U133A) GSM311740 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =44 years; OS = 352 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =44 years 352 1 CN_AML Patient 40 (U133A) GSM311637 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =47 years; OS = 366 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =47 years 366 0 CN_AML Patient 91 (U133A) GSM311688 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =47 years; OS = 416 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =47 years 416 1 CN_AML Patient 8 (U133A) GSM311605 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =34 years; OS = 421 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =34 years 421 1 CN_AML Patient 37 (U133A) GSM311634 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =28 years; OS = 425 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =28 years 425 0 CN_AML Patient 7 (U133A) GSM311604 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =66 years; OS = 427 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =66 years 427 1 CN_AML Patient 3 (U133A) GSM311600 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =66 years; OS = 432 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =66 years 432 1 CN_AML Patient 77 (U133A) GSM311674 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =54 years; OS = 442 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =54 years 442 1 CN_AML Patient 95 (U133A) GSM311692 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =60 years; OS = 452 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =60 years 452 0 CN_AML Patient 50 (U133A) GSM311647 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =63 years; OS = 461 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =63 years 461 1 CN_AML Patient 109 (U133A) GSM311706 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =69 years; OS = 484 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =69 years 484 1 CN_AML Patient 125 (U133A) GSM311722 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =44 years; OS = 486 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =44 years 486 0 CN_AML Patient 146 (U133A) GSM311743 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =68 years; OS = 559 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =68 years 559 1 CN_AML Patient 115 (U133A) GSM311712 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =57 years; OS = 575 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =57 years 575 0 CN_AML Patient 111 (U133A) GSM311708 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =38 years; OS = 581 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =38 years 581 0 CN_AML Patient 85 (U133A) GSM311682 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =60 years; OS = 599 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =60 years 599 1 CN_AML Patient 118 (U133A) GSM311715 peripheral blood mononuclear cells "AML, normal karyotype (training set) FAB M1; age =39 years; OS = 608 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =39 years 608 0 CN_AML Patient 6 (U133A) GSM311603 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =52 years; OS = 657 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =52 years 657 1 CN_AML Patient 160 (U133A) GSM311757 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =56 years; OS = 676 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =56 years 676 0 CN_AML Patient 126 (U133A) GSM311723 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =66 years; OS = 693 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =66 years 693 1 CN_AML Patient 15 (U133A) GSM311612 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =48 years; OS = 719 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =48 years 719 0 CN_AML Patient 103 (U133A) GSM311700 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M0; age =44 years; OS = 741 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M0" age =44 years 741 1 CN_AML Patient 68 (U133A) GSM311665 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =47 years; OS = 749 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =47 years 749 1 CN_AML Patient 13 (U133A) GSM311610 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M0; age =64 years; OS = 761 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M0" age =64 years 761 1 CN_AML Patient 122 (U133A) GSM311719 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =71 years; OS = 794 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =71 years 794 0 CN_AML Patient 49 (U133A) GSM311646 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =19 years; OS = 826 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =19 years 826 0 CN_AML Patient 121 (U133A) GSM311718 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =49 years; OS = 840 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =49 years 840 0 CN_AML Patient 36 (U133A) GSM311633 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =62 years; OS = 842 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =62 years 842 0 CN_AML Patient 120 (U133A) GSM311717 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =32 years; OS = 849 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =32 years 849 0 CN_AML Patient 114 (U133A) GSM311711 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =58 years; OS = 850 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =58 years 850 0 CN_AML Patient 22 (U133A) GSM311619 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =61 years; OS = 860 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =61 years 860 0 CN_AML Patient 99 (U133A) GSM311696 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =53 years; OS = 872 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =53 years 872 1 CN_AML Patient 113 (U133A) GSM311710 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =57 years; OS = 891 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =57 years 891 0 CN_AML Patient 163 (U133A) GSM311760 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =32 years; OS = 916 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =32 years 916 0 CN_AML Patient 27 (U133A) GSM311624 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =76 years; OS = 924 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =76 years 924 0 CN_AML Patient 140 (U133A) GSM311737 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =37 years; OS = 999 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =37 years 999 1 CN_AML Patient 67 (U133A) GSM311664 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =76 years; OS = 1102 days; 1" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =76 years 1102 1 CN_AML Patient 33 (U133A) GSM311630 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =55 years; OS = 1103 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =55 years 1103 0 CN_AML Patient 145 (U133A) GSM311742 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =68 years; OS = 1113 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =68 years 1113 0 CN_AML Patient 28 (U133A) GSM311625 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =76 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =76 years 1176 0 CN_AML Patient 34 (U133A) GSM311631 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =41 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =41 years 1176 0 CN_AML Patient 35 (U133A) GSM311632 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =45 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =45 years 1176 0 CN_AML Patient 39 (U133A) GSM311636 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =73 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =73 years 1176 0 CN_AML Patient 41 (U133A) GSM311638 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M6; age =34 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M6" age =34 years 1176 0 CN_AML Patient 44 (U133A) GSM311641 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M0; age =34 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M0" age =34 years 1176 0 CN_AML Patient 52 (U133A) GSM311649 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =59 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =59 years 1176 0 CN_AML Patient 58 (U133A) GSM311655 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =43 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =43 years 1176 0 CN_AML Patient 64 (U133A) GSM311661 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =46 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =46 years 1176 0 CN_AML Patient 84 (U133A) GSM311681 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =39 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =39 years 1176 0 CN_AML Patient 86 (U133A) GSM311683 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =72 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =72 years 1176 0 CN_AML Patient 107 (U133A) GSM311704 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =47 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =47 years 1176 0 CN_AML Patient 129 (U133A) GSM311726 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =17 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =17 years 1176 0 CN_AML Patient 131 (U133A) GSM311728 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =65 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =65 years 1176 0 CN_AML Patient 132 (U133A) GSM311729 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =20 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =20 years 1176 0 CN_AML Patient 134 (U133A) GSM311731 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =66 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =66 years 1176 0 CN_AML Patient 139 (U133A) GSM311736 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =54 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =54 years 1176 0 CN_AML Patient 141 (U133A) GSM311738 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =55 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =55 years 1176 0 CN_AML Patient 148 (U133A) GSM311745 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =67 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =67 years 1176 0 CN_AML Patient 150 (U133A) GSM311747 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =71 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =71 years 1176 0 CN_AML Patient 151 (U133A) GSM311748 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =40 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =40 years 1176 0 CN_AML Patient 152 (U133A) GSM311749 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =38 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =38 years 1176 0 CN_AML Patient 153 (U133A) GSM311750 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M2; age =43 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M2" age =43 years 1176 0 CN_AML Patient 154 (U133A) GSM311751 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M5; age =57 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M5" age =57 years 1176 0 CN_AML Patient 155 (U133A) GSM311752 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =59 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =59 years 1176 0 CN_AML Patient 156 (U133A) GSM311753 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M1; age =29 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M1" age =29 years 1176 0 CN_AML Patient 157 (U133A) GSM311754 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =61 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =61 years 1176 0 CN_AML Patient 161 (U133A) GSM311758 bone marrow mononuclear cells "AML, normal karyotype (training set) FAB M4; age =53 years; OS = 1176 days; 0" Pretreatment bone marrow or peripheral blood mononuclear cells from patients with newly diagnosed acute myeloid leukemia (AML) with a normal karyotype total RNA "Mononuclear cells from bone marrow (BM) or peripheral blood (PB) were enriched by Ficoll gradient centrifugation. Total RNA was isolated using the RNeasy Mini Kit (Qiagen, Hilden, Germany). cDNA preparation and in vitro transcription were performed according to standard Affymetrix protocols." biotin Biotin labeling of antisense cRNA was performed according to standard Affymetrix protocols Sample hybridisation was performed for 16 hours according to standard Affymetrix protocols Samples were scanned using an Affymetrix GeneChip scanner "AML, normal karyotype (training set) FAB M4" age =53 years 1176 0