dataset_id n_sequenced_cells n_high_quality_cells median_total_mapped_reads median_coverage_breadth median_coverage_depth umap__n_neighbors hdbscan__min_samples hdbscan__min_cluster_size cell_type signature_type SA039 2061 878 2140177.0 0.05635 0.05943 100 5 20 184-hTert SA1054 636 382 2220094.0 0.05973 0.06366 5 5 20 184-hTert SA1055 582 391 2643700.0 0.06717 0.07150 25 5 15 184-hTert SA1056 758 496 1780342.0 0.04336 0.04574 100 5 20 184-hTert SA1188 1245 472 1941492.5 0.04363 0.04560 20 5 10 184-hTert SA1188-extra 2930 1395 1750875.0 0.04199 0.04384 n/a n/a n/a 184-hTert SA1292 1289 377 1591582.0 0.02084 0.02139 25 5 20 184-hTert SA906a 1441 650 1368550.5 0.03300 0.03440 50 5 20 184-hTert SA906a-extra 6044 3061 1378294.0 0.03351 0.03489 n/a n/a n/a 184-hTert SA906b 1355 984 1280393.5 0.03320 0.03452 100 5 20 184-hTert SA906b-extra 7955 4732 1098603.0 0.02623 0.02730 n/a n/a n/a 184-hTert DG1134 455 133 2694340.0 0.04043 0.04268 5 5 5 HGSC FBI DG1197 345 115 2146373.0 0.03327 0.03489 100 5 20 HGSC FBI SA1049 3564 1283 3317326.0 0.07753 0.08399 100 5 20 HGSC FBI SA1091 1629 506 2043910.0 0.05860 0.06276 3 25 15 HGSC FBI SA1096 3944 802 2271622.0 0.06030 0.06459 10 1 20 HGSC FBI SA1162 3176 254 2995304.0 0.07100 0.07602 5 1 10 HGSC FBI SA1180 1228 774 2141666.5 0.05168 0.05446 100 5 20 HGSC FBI SA1182 487 214 4722266.0 0.11503 0.12795 10 5 20 HGSC FBI SA1050 3457 990 2718403.5 0.07017 0.07424 100 5 20 HGSC HRD-Dup SA1051 2067 892 3130638.0 0.07277 0.07791 25 5 20 HGSC HRD-Dup SA1052 3700 556 3159566.5 0.07724 0.08379 100 5 20 HGSC HRD-Dup SA1053 2611 825 2089300.0 0.05102 0.05411 100 5 20 HGSC HRD-Dup SA1181 833 296 3041172.5 0.07277 0.07812 5 5 20 HGSC HRD-Dup SA1184 1681 621 2182385.0 0.04688 0.04925 25 10 20 HGSC HRD-Dup SA1047 1172 347 4685558.0 0.08730 0.09434 25 1 5 HGSC TD SA1093 1261 346 2409750.5 0.06648 0.07091 25 5 20 HGSC TD SA530 743 324 2710163.5 0.04964 0.05365 5 5 20 TNBC FBI SA604 6630 2139 1643149.0 0.04438 0.04670 25 5 20 TNBC FBI SA609 14008 6033 1187441.0 0.02981 0.03107 20 5 20 TNBC FBI SA610 1250 268 3952805.0 0.09851 0.10777 100 5 20 TNBC FBI SA501 14551 2473 1857427.0 0.04313 0.04530 100 5 20 TNBC HRD-Dup SA535 5984 1801 1724480.0 0.04972 0.05273 12 5 20 TNBC HRD-Dup SA605 1057 65 8540392.0 0.13043 0.14501 5 5 10 TNBC TD