Table II.
Oligonucleotide primers used for PCR amplification reactions.
| Primers | Sequence (5′–3′) |
|---|---|
| 1a | GGTACCCCCGATAGCTTCCGCTATTGC |
| 2 | CTACGAAGGATGAAATTTTTCAGGG |
| 3a | GCAATAGCGGAAGCTATCGGGGGTACC |
| 4 | CCCTGAAAAATTTCATCCTTCGTAG |
| 48 | GTCAGATAGGCCTAATGACTGGC |
| 76 | TTATAAAAGCCAGTCATTAGGCCTATCTGAC |
| 77b | aatcaGCATGC GGTACCTTATAAAAGCCAGTCATTAGGCCTATCTGAC |
| 118 | ATGGCTACAATGGTCTGTAATTATCTTC |
| 119 | TTATATTACTGTTATTGTTCGTAGATCC |
| 120 | CCATGATAATCTCGACTTCGG |
| 121 | GCAATAGCGGAAGCTATCGGGGGTACCATTCCTATCTCTTGAAGGATAGG |
| 122 | CCCTGAAAAATTTCATCCTTCGTAGGTATAGAGGTACAATGGATATAGGGC |
| 123 | GCACCCATTTATCTAAATAATCTTC |
| 124 | GGCCCTCAACCTTTTCTGGC |
| 125 | CCTATCCTTTAGGTATCTATATG |
| 126b | CGAACAATAACAGTAATATAATGTACAATGAACTTTAATAAAATTGATTTAGAC |
| 127 | aatcaCATATGGGTACCTTATAAAAGCCAGTCATTAGGCCTATCTGAC |
| 128 | aatcaGGTACCGTATAGAGGTACAATGGATATAGGGC |
| 130 | CCAATTGTCTAAATCAATTTTATTAAAGTTCATTGTACATTATATTACTGTTATTGTTCGTAGATCC |
| 133 | aatcaTGTACATTATATTACTGTTATTGTTCGTAGATCCTC |
| 134 | aatcaCTCGAGCCATGATAATCTCGACTTCGG |
| 140 | aatcaCATATGGCACCCATTTATCTAAATAATCTTC |
| 152 | CTAAATTTCTTTCATAATAATTCTTTGTATAATGATTGATGTTTTAAATTTAGAATGGACC |
| 153 | GGTCCATTCTAAATTTAAAACATCAATCATTATACAAAGAATTATTATGAAAGAAATTTAG |
| 460c | ATGACAAAAAAGAAATTGCCCGTTCGTTTTAC |
| 461c | CTACGAAGGATGAAATTTTTCAGGGACAAC |
| 474d | CGGGCAATTTCTTTTTTGTCATTTCTTAATGTAATCTAAGTCCAACCG |
| 475d | TTGTAGCAGAACTATCAGCCAATCAC |
| 476d | GTTGTCCCTGAAAAATTTCATCCTTCGTAGGTATAGAGGTACAATGGATATAG |
| 477d | CCCAGACTCTTCTTTAACAAGAAACC |
| 512 | TGCAGGCTGCAATTGATTCC |
| 513 | GATCCCACGTGAAAGCAAATA |
| 524 | GTAAAACGAACGGGCAATTTCTTTTTTGTCAT |
| 525 | CCCTGAAAAATTTCATCCTTCGTAG |
| 530 | CGTATGATATTTGCAGTCTTG |
| 531 | GTAATAACCATATCTGCCTCTGGAAC |
| 540 | CAACAATTGTAGCAGAACTATCAGCC |
| 541 | aatcaGGTACCTATAAGTATAGAGGTACAATGGATATAGG |
| 542 | aatcaGCATGCGGTATCTATATGAAGTACGCACC |
| 543 | ctgaCTCGAGCAACAATTGTAGCAGAACTATC |
| 565 | CTAAATCAATTTTATTAAAGTTCAT |
| 575 | TCTAAATTAAGAATATCCATTTCTTAATGTAATCTAAGTCCAACCGCATTCC |
| 576 | GACTTAGATTACATTAAGAAATGGATATTCTTAATTTAGAATGGACTTCC |
Nucleotides used for overlap-extension PCRs are written in bold, artificial restriction sites are underscored. Lowercase letters indicate artificially introduced bases to improve restriction enzyme digestion.
Sequence (3′–5′)