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. Author manuscript; available in PMC: 2018 Jan 2.
Published in final edited form as: Neuron. 2017 Nov 30;96(6):1342–1357.e5. doi: 10.1016/j.neuron.2017.10.033
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies to
Calbindin (CB) [host Rb; Dil 1:5000] Swant Cat. No. CB 38; RRID:AB_10000340
Calretinin (CR) [host Rb; Dil 1:500] Swant Cat. No. 7699/3H; RRID:AB_10000321
Metabotropic glutamate receptor 1a (mGluR1a) [host Gp; Dil 1:1000] Frontier Institute Cat. No. mGluR1a-GP-Af660; RRID:AB_2531897
Parvalbumin (PV) [host Rb; Dil 1:1000] Swant Cat. No. PV 28; RRID:AB_2315235
Parvalbumin (PV) [host Gt; Dil 1:1000] Swant Cat. No. PVG 214; RRID:AB_10000345
Parvalbumin (PV) [host Gp; Dil 1:5000] Synaptic Systems Cat. No. 195 004; RRID:AB_2156476
Pro-cholecystokinin (pro-CCK) [host Rb; Dil 1:500] April 2005 gift (similar to Frontier Institute, CCK-pro-Rb-Af350) Similar labeling to two non-commercial antibodies characterized by Sloviter and Nilaver (The Journal of Comparative Neurology, 1987, 256, 42–102), Morino et al. (The European Journal of Neuroscience, 1994, 6, 681–773).
SATB1 (N-14) [host Rb; Dil 1:200] Abcam Cat. No. ab70004; RRID:AB_1270545
SATB1 (N-14) [host Gt; Dil 1:200] Santa Cruz Cat. No. sc-5989; RRID:AB_2184337
Somatostatin (SOM) [host Ms; Dil 1:500] GeneTex Cat. No. GTX71935; RRID:AB_383280
Somatostatin (SOM) [host Rb; Dil 1:50] GenWay Biotech Cat. No. 18-783-76392; RRID:AB_1027453
Vesicular GABA transporter (VGAT) [host Rb; Dil 1:500] Synaptic Systems Cat. No. 131 003; RRID:AB_887869
Vesicular GABA transporter (VGAT) [host Gp; Dil 1:500] Synaptic Systems Cat. No. 131 004; RRID:AB_887873
Vesicular Glutamate transporter (VGlut2) [host Gp; Dil 1:2000] Synaptic Systems Cat. No. 135 404; RRID:AB_887884
Chemicals, Peptides, and Recombinant Proteins
Neurobiotin Tracer Vector Laboratories Cat. No. SP-1120
Critical Commercial Assays
Vectastain ABC kit Vector Laboratories Cat. No. 6100
VECTASHIELD Antifade Mounting Medium Vector Laboratories Cat. No. H-1000
Experimental Models: Organisms/Strains
C57Bl/6J Charles River JAX Mice Stock Number 000664
Software and Algorithms
MATLAB MathWorks Version R2014a; https://uk.mathworks.com/products/matlab.html
Spike2 Cambridge Electronic Design Limited (CED) Spike2 version 7 and version 8; http://ced.co.uk/
KlustaKwik Harris et al., 2000 http://klustakwik.sourceforge.net/
Zen Zeiss Version 2.1; https://www.zeiss.co.uk/corporate/home.html
Fiji ImageJ (Schindelin et al., 2012)
Scalable Brain Atlas Allen Brain Atlas (Bakker et al., 2015)
Other
Silicon probe; A2x2tet-10mm-150-150-121 NeuroNexus http://neuronexus.com/
Jetball Dome PhenoSys http://www.phenosys.com/products/virtual-reality/jetball-dome/