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. Author manuscript; available in PMC: 2018 Jun 12.
Published in final edited form as: Biochem J. 2018 Jun 6;475(11):1909–1937. doi: 10.1042/BCJ20180043

Table 1. Proteomic identification of CoAlated proteins in S. aureus treated with diamide. CoAlated peptides identified by MS/MS analysis and corresponding proteins are shown. Perspective CoA-modified cysteine residues within the identified peptides are marked by asterisks.

Gene name Protein name MW (kDa) Sequence Score
HMPREF0769_11633 Resolvase, N-terminal domain protein 21.845 LNAYGC*EK 72.531
MW2460 MW2460 protein 63.757 LC*EDVAVYNHQIEK 97.291
ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase 17.89 GGC*SPVGMK 41.689
pyrE Orotate phosphoribosyltransferase 22.057 SPIYC*DNR 105.25
binL BinL protein 22.491 LNTHGC*EK 98.156
SAOUHSC_02733 Membrane protein, putative 67.572 NVNVC*TIPFK 116.98
SAUSA300_1090 Pseudouridine synthase 34.634 DYTLVEC*QLETGR 88.803
SAKOR_01553 Uncharacterized protein 50.22 LIEESPC*AALTEER 106.87
pyrG Cytidine 5′-triphosphate synthase 59.991 ESVIEC*R 131.12
pyrG Cytidine 5′-triphosphate synthase 59.991 IALFC*DINK 153.34
pyrG Cytidine 5′-triphosphate synthase 59.991 LGLYPC*SIK 86.114
yisK Fumarylacetoacetate hydrolase family protein 33.113 SLTGGC*PMGPYIVTK 108.45
deoC2 Deoxyribose-phosphate aldolase 2 23.341 SVC*VNPTHVK 99.941
polC DNA polymerase III PolC-type 162.69 NC*GFDIDK 94.767
AYM28_04315 Phage protein 10.633 ENYFC*DR 58.132
V070_02571 Uncharacterized protein 13.806 SC*VEVAR 83.647
pflB Formate acetyltransferase 84.861 AAC*EAYGYELDEETEK 166.57
pflB Formate acetyltransferase 84.861 IPYDC*C*K 101.46
rpmF 50S ribosomal protein L32 6.48 NC*GSYNGEEVAAK 159.4
purB Adenylosuccinate lyase 49.603 EELDEC*FDPK 109.15
pheT Phenylalanine–tRNA ligase β subunit 88.901 AC*YLLQTYANGK 110.22
SAZ172_1072 Uncharacterized protein 8.7688 NAGKFEETPC*EFVDGSKGVR 236.03
ddl d-alanine–d-alanine ligase 40.23 ATDC*SGLVR 136.81
ddl d-alanine–d-alanine ligase 40.23 C*NNEAELK 100.09
HMPREF0769_11996 Response regulator receiver domain protein 27.021 KDGIDVC*K 104.94
gapA2 Glyceraldehyde-3-phosphate dehydrogenase 2 36.979 SC*NESIIPTSTGAAK 122.83
N/A Truncated catalase-like protein 38.88 GVGIENIC*PFSR 173.19
mvaD Mevalonate diphosphate decarboxylase 36.831 EAGYPC*YFTMDAGPNVK 116.79
rpoC DNA-directed RNA polymerase subunit β′ 135.41 C*GVEVTK 114.89
rpoC DNA-directed RNA polymerase subunit β′ 135.41 DGLFC*ER 87.806
rpoC DNA-directed RNA polymerase subunit β′ 135.41 DWEC*.SC*.GK 121.61
rpoC DNA-directed RNA polymerase subunit β′ 135.41 MYQC*GLPK 123.86
gluD NAD-specific glutamate dehydrogenase 45.76 C*GIVNLPYGGGK 135.81
gluD NAD-specific glutamate dehydrogenase 45.76 GGIVC*DPR 110.53
SAKOR_01005 Phosphoenolpyruvate–protein phosphotransferase 63.276 LC*LAQQDIFR 135.02
SAKOR_02109 Uncharacterized protein 12.497 TAETNYFWLNC*GYNR 141.34
HMPREF0776_2410 ABC transporter, ATP-binding protein 13.659 FTEGNC*YGLIGANGAGK 128.85
SAOUHSC_00756 Uncharacterized protein 41.797 IAELC*HK 96.034
yloU General stress protein, Gls24 family 13.345 AVEC*YGIVGMASR 161.48
rap 50S ribosomal protein L2 30.026 MILSTC*R 128.6
cmk Cytidylate kinase 24.595 GQC*VILDNEDVTDFLR 91.622
sarS HTH-type transcriptional regulator SarS 29.889 KIVSDLC*YK 205.53
SAR2771 UPF0176 protein SAR2771 36.938 DWFDGKPC*ER 108.32
SAR2771 UPF0176 protein SAR2771 36.938 VVTYC*TGGIR 139.78
SAR2771 UPF0176 protein SAR2771 36.938 YINCANPEC*NK 111.07
SAR2771 UPF0176 protein SAR2771 36.938 YLGAC*SYDCAK 92.151
SAR2771 UPF0176 protein SAR2771 36.938 YLGACSYDC*AK 104.7
SAR2771 UPF0176 protein SAR2771 36.938 YTTIDDPEQFAQDHLAFC*K 97.823
HMPREF0769_10405 Metallo-β-lactamase domain protein 29.57 EVLLC*DTDK 190.66
ctsR Transcriptional regulator CtsR 17.841 FDC*VPSQLNYVIK 189.52
rplN 50S ribosomal protein L14 13.135 FDENAC*VIIR 96.464
rplN 50S ribosomal protein L14 13.135 TANIGDVIVC*TVK 196.01
RK97_03585 Nitrogen fixation protein NifU 16.631 C*ATLAWK 95.81
RK97_03585 Nitrogen fixation protein NifU 16.631 GVLDNGSMTVDMNNPTC*GDR 109.28
proC Pyrroline-5-carboxylate reductase 29.825 QQLEC*QNPVAR 108.23
aspS Aspartate–tRNA ligase 55.836 C*FRDEDLR 94.767
infB Translation initiation factor IF-2 31.699 VGTIAGC*YVTEGK 132.15
pyrB Aspartate carbamoyltransferase 33.257 GESLYDTC*K 130.69
tsaD tRNA N6-adenosine threonylcarbamoyltransferase 37.069 QSLADQC*K 72.289
mshB Bacillithiol biosynthesis deacetylase BshB2 24.894 ERELEEAC*K 158.76
SAOUHSC_00547 Uncharacterized protein 58.418 QC*QDISQYIENK 94.309
murI Glutamate racemase 29.702 C*PYGPRPGEQVK 103.13
clpC ATP-dependent Clp protease 91.141 GELQC*IGATTLDEYRK 190.1
SAV0414 Uncharacterized protein 83.287 C*AIVTDLDEQAIPSEHR 77.668
SAV0414 Uncharacterized protein 83.287 IVEFEAC*R 149.94
SAV0414 Uncharacterized protein 83.287 SNLNFC*INENYDK 231.38
murE UDP-N-acetylmuramoyl-l-alanyl-d-glutamate–l-lysine ligase 54.104 FC*QNVADQGCK 82.515
SAOUHSC_02158 Uncharacterized protein 48.119 IAFSC*VEK 131.42
ribH 6,7-Dimethyl-8-ribityllumazine synthase 16.41 GATSHYDYVC*NEVAK 54.094
nadE NH(3)-dependent NAD(+) synthetase 30.682 EEGIDC*TFIAVK 139.77
glyA Serine hydroxymethyltransferase 45.172 EAEETLDSVGITC*NK 114.55
glyA Serine hydroxymethyltransferase 45.172 GGMILC*K 85.212
AYM28_08455 Integral membrane protein 36.972 YSYIC*EK 125.75
ble Bleomycin resistance protein 14.922 SIGFYC*DK 117.25
SAOUHSC_01732 Uncharacterized protein 12.768 KEGQGC*ISLK 92.247
typA GTP-binding protein TypA 37.865 EIDGVMC*EPFER 191.89
secA Protein translocase subunit SecA 11.664 NDDC*.PC*.GSGK 70.68
vraX Protein VraX 6.5003 C*DDSFSDTEIFK 128.06
AYM28_07645 YqiW-like protein 16.014 DAFDENC*K 129
AYM28_05325 UPF0738 protein AYM22_05325 13.529 IKDDILYC*YTEDSIK 108.28
dltA d-alanine–poly(phosphoribitol) ligase subunit 1 54.67 AGC*GYVPVDTSIPEDR 167.93
SAOUHSC_02613 Uncharacterized protein 25.225 AVC*GFSK 90.601
SAOUHSC_01744 Uncharacterized protein 85.61 VLNDQC*PTSVK 153.41
AYM28_02495 GIY-YIG catalytic domain protein 9.1542 C*SDGSLYTGYAK 114.31
tagF_3 CDP-glycerol–poly(glycerophosphate) glycerophosphotransferase 66.074 IDGNQFVC*R 111.5
mqo1 Probable malate : quinone oxidoreductase 1 54.785 C*TNQEVIDR 135.04
mqo1 Probable malate : quinone oxidoreductase 1 54.785 DGTVDC*SK 147.3
N/A Putative uncharacterized protein 7.9711 GEC*DDKWEGLYSK 104.76
gnd 6-Phosphogluconate dehydrogenase 51.802 DGASC*VTYIGPNGAGHYVK 98.76
gnd 6-Phosphogluconate dehydrogenase 51.802 IC*SYAQGFAQMR 155.33
alr1 Alanine racemase 1 42.823 VC*MDQTIVK 114.72
SAOUHSC_00696 Uncharacterized protein 34.777 C*GIILPSK 110.41
ychF Ribosome-binding ATPase YchF 13.516 EVDAIC*QVVR 196.02
tsf Elongation factor Ts 32.511 TGAGMMDC*K 78.324
xpt Xanthine phosphoribosyltransferase 20.884 LEEAGLTVSSLC*K 79.332
mqo2 Probable malate : quinone oxidoreductase 2 55.998 EGC*MNHLR 122.94
gmk Guanylate kinase 24.037 IQC*IVEAEHLK 100.11
HMPREF0776_1272 Mu transposase domain protein 32.351 NDTNWPVC*GIPEK 69.314
MW1126 Ribosome biogenesis GTPase A 33.403 IGNYC*FDIFK 65.809
fabG β-Ketoacyl-ACP reductase 24.616 GVFNC*IQK 121.73
SAKOR_02572 Transcriptional regulator, TetR family protein 22.356 ALLQC*IEAGNNK 89.484
SAKOR_02572 Transcriptional regulator, TetR family protein 22.356 SDLC*YYVIQR 129.82
nth Endonuclease III 25.668 LC*SVIPR 78.264
SA0511 Uncharacterized epimerase/dehydratase 36.052 QGIANSWPDSIDTSC*SR 155.06
SA0511 Uncharacterized epimerase/dehydratase 36.052 VAGELLC*QYYFK 119
tagF_2 Putative teichoic acid biosynthesis protein 45.954 IC*QTLFK 66.056
mnmG tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 69.507 YC*PSIEDK 131.09
rpoA DNA-directed RNA polymerase subunit alpha 35.011 SYNC*LKR 61.593
tagB Teichoic acid biosynthesis protein B 18.212 C*LPGYTLINK 116.74
SAOUHSC_01812 Uncharacterized protein 35.096 C*IEDNDTIIIHR 141.34
SAV1710 Putative universal stress protein SAV1710 18.38 HAPC*DVLVVR 131.83
srtA LPXTG-specific sortase A 23.541 QLTLITC*DDYNEK 152.32
ST398NM01_1322 Uncharacterized protein 28.118 SELEELC*K 118.23
recG ATP-dependent DNA helicase RecG 78.343 C*IFFNQPYLK 125.72
SAKOR_00906 Oligopeptide transport ATP-binding protein oppF 16.074 GETLGLVGESGC*GK 102.03
murD MURD 29.82 NQTEEDYLIC*NYHQR 92.151
SA0315 Uncharacterized protein 20.923 C*DAPMEVNK 73.435
HMPREF0776_0655 3-Demethylubiquinone-9 3-methyltransferase domain protein 16.768 VLC*SDSFGR 132.03
SAOUHSC_02324 Uncharacterized protein 24.634 QFFTEWNC*HD 141.58
rnc Ribonuclease III 27.922 ATIVC*EPSLVIFANK 95.273
topA DNA topoisomerase I 79.07 C*NDGDVVER 92.151
topA DNA topoisomerase I 79.07 C*NQYLVENK 126.12
rpmJ 50S ribosomal protein L36 4.3 VMVIC*ENPK 183.99
SAZ172_2022 Uncharacterized protein 24.952 TVIIDC*VTK 109.44
N/A Uncharacterized protein 13.573 GIDLNMGC*PVANVAK 167.93
polC_2 DNA polymerase III PolC-type 4.1918 TSIC*SVGMVK 67.952
ackA Acetate kinase 44.056 IISC*HIGNGASIAAIDGGK 50.404
SAOUHSC_02264 Accessory gene regulator protein C 13.754 C*ADDIPR 101.46
rnpA Ribonuclease P protein component 11.093 QFVVYTC*NNK 166.48
rpmG 50S ribosomal protein L33 5.87 VNVTLAC*TEC*GDR 134.08
rpmG 50S ribosomal protein L33 5.87 VNVTLAC*TEC*GDR 100.01
N/A mRNA interferase PemK 20.91 FLC*DSLK 100.25
graR Response regulator protein GraR 26.066 YDGFYWC*R 123.79
SAKOR_02101 Uncharacterized protein 42.899 VVVLGC*PAEEGGENGSAK 95.755
SAKOR_02241 Molybdopterin biosynthesis MoeB protein 37.894 YATLC*GR 87.806
cshB DEAD-box ATP-dependent RNA helicase CshB 51.064 C*NAQPQLIIGTPTR 86.016
SACOL0939 NifU domain protein 7.9651 DGGDC*SLIDVEDGIVK 163.45
SAKOR_00091 Ornithine cyclodeaminase family protein 37.776 VVVDDWSQC*NR 91.592
SA2277 Uncharacterized protein 50.847 TILC*ALDVR 107.34
glnA Glutamine synthetase 50.854 GFTAVC*NPLVNSYK 229.96
glnA Glutamine synthetase 50.854 LIC*DVYK 111.61
glnA Glutamine synthetase 50.854 LVPGYEAPC*YIAWSGK 134.32
glnA Glutamine synthetase 50.854 YADAVTAC*DNIQTFK 154.34
whiA Putative sporulation transcription regulator WhiA 35.868 LVNC*ETANLNK 154.72
whiA Putative sporulation transcription regulator WhiA 35.868 NNIYIC*R 157.91
SAKOR_00683 Transcriptional regulator, MarR family protein 17.089 EQLC*FSLYNAQR 207.66
menB 1,4-Dihydroxy-2-naphthoyl-CoA synthase 30.411 EIWYLC*R 154.12
menB 1,4-Dihydroxy-2-naphthoyl-CoA synthase 30.411 VEDETVQWC*K 185.57
perR Peroxide-responsive repressor PerR 17.183 MEIYGVC*K 120.45
SAOUHSC_00462 Uncharacterized protein 29.281 GLSYEEVC*EQTTK 170
tpx Probable thiol peroxidase 18.005 LISVVPSIDTGVC*DQQTR 81.656
SAOUHSC_00960 Uncharacterized protein 57.927 VTMTDYC*YR 87.216
ybhF_3 ABC transporter ATP-binding protein 32.952 LEDIELIC*DR 121.42
BN1321_100031 MutT/NUDIX family protein 15.067 C*VCLVEETADK 193.28
SAKOR_00705 Uncharacterized protein 14.205 YDEVTIYC*K 153.74
SAOUHSC_01677 Uncharacterized protein 25.002 TAQTVTDLRPAGIIFC*ENER 111.77
SAKOR_00374 Phosphoglycerate mutase family protein 22.777 SADDLC*DYFK 121.56
sufB Fe–S cluster assembly protein SufB 52.531 YPNC*VLLGEGAK 121.45
ccpA Catabolite control protein A 12.161 NGLQLGDTLNC*SGAESYK 140.07
SAV0485 Signal peptidase II-like protein 23.935 DAENALILC*K 85.672
SAV0485 Signal peptidase II-like protein 23.935 LVNC*EYTLDK 97.223
sucD Succinate-CoA ligase [ADP-forming] subunit alpha 31.542 LVGPNC*PGVITADEC*K 249.56
sucD Succinate-CoA ligase [ADP-forming] subunit alpha 31.542 LVGPNC*PGVITADEC*K 179.85
sucD Succinate-CoA ligase [ADP-forming] subunit alpha 31.542 TLNSC*GVK 91.469
SAKOR_01205 Transcriptional regulator, GntR family protein 26.976 EQSNHNIC*YADTEIEAVNYEPR 97.621
SAKOR_01205 Transcriptional regulator, GntR family protein 26.976 TADGEPVVYC*LDK 129.88
SAOUHSC_02755 Uncharacterized protein 39.192 YGC*ALAIEVLK 79.283
ugtP Processive diacylglycerol β-glucosyltransferase 44.547 SANAQVVMIC*GK 213.99
ugtP Processive diacylglycerol β-glucosyltransferase 44.547 YATQTIC*R 122.18
MW0660 MW0660 protein 28.342 TGC*SASTIR 104.07
MW0924 Uncharacterized protein 18.511 SC*VDATYR 89.171
MW0924 Uncharacterized protein 18.511 VAGC*IISYSGENELK 145.17
MW0924 Uncharacterized protein 18.511 WSLNC*DINNEAALK 126.04
SAOUHSC_01973 Uncharacterized protein 35.778 EAEILC*YIDNIDAR 77.505
SAOUHSC_01973 Uncharacterized protein 35.778 SIC*DIYPLLNK 112.44
upp Uracil phosphoribosyltransferase 23.05 FMC*LIAAPEGVEK 131.96
SAOUHSC_02727 Uncharacterized protein 22.28 C*IYVQPHSYTIENQQQNK 119.37
MW0535 MW0535 protein 29.857 AGEVYEASNAQYFVVDPVMVC*K 55.621
HMPREF0776_0347 CHAP domain protein 12.753 NLYTSGQC*TYYVFDR 78.615
SAOUHSC_02574 Uncharacterized protein 40.742 SCLNDC*YDK 139.74
SAV2378 Uncharacterized protein 13 C*ANEEER 63.624
tagH_1 Teichoic acids export ATP-binding protein TagH 29.762 MLC*MGFK 101.28
CH52_06005 2-Dehydropantoate 2-reductase 32.358 QLLLDGC*R 82.279
glyS Glycine–tRNA ligase 53.62 IIDDEGIVC*PVSK 195.45
glyS Glycine–tRNA ligase 53.62 YIPYC*IEPSLGADR 107.98
tpiA Triosephosphate isomerase (TIM) (TPI) 27.261 HGMTPIIC*VGETDEER 135.95
tpiA Triosephosphate isomerase (TIM) (TPI) 27.261 SSTSEDANEMC*AFVR 142.93
SAOUHSC_01716 Uncharacterized protein 47.655 C*TLSNHMTAR 60.901
SAOUHSC_01716 Uncharacterized protein 47.655 TGATGIIVADPLIIETC*K 92.8
vraS_1 Histidine kinase (nitrate/nitrite sensor protein) (EC 2.7.3.-) (two-component sensor protein) 41.88 ALQEC*INNVK 101.61
vicR DNA-binding response regulator (PhoP family transcriptional regulator) 27.192 DGMEVC*R 117.81
SAOUHSC_02218 Conserved hypothetical phage protein 11.1 EISNGHC*NYWK 144.51
SAOUHSC_01696 Uncharacterized protein 22.463 TIDC*LNYYNYSDER 154.72
hsdS_2 Restriction endonuclease subunit S 23.781 IPC*LTEQDK 102.87
sufA Chaperone involved in Fe–S cluster assembly 12.485 VAGNPENC* 106.16
SAKOR_00641 Ferrichrome transport ATP-binding protein fhuC 29.496 TGKPLLVTYDLC*R 90.755
SAKOR_00641 Ferrichrome transport ATP-binding protein fhuC 29.496 VTSIIGPNGC*GK 164.66
HMPREF0769_12132 ROK family protein 35.077 IILAADVGGTTC*K 103.13
nadK NAD kinase 30.769 GDGLC*VSTPSGSTAYNK 102.24
mraZ Transcriptional regulator MraZ 17.237 EC*TVIGVSNR 109.16
yutD Uncharacterized protein conserved in bacteria 15.401 EC*FNEEQFIAR15.401 149.35
SAZ172_0295 Uncharacterized protein 15.751 C*FEEEDFER 164.48
SAZ172_0295 Uncharacterized protein 15.751 YIDC*LEVGPTLSTK 170
gatA Glutamyl-tRNA(Gln) amidotransferase subunit A 52.82 DNIITNGLETTC*ASK 128.66
MW0675 MW0675 protein 22.322 YHSLIADGATFPNC*LK 80.905
rpsR 30S ribosomal protein S18 9.3098 VC*YFTANGITHIDYK 100.69
fusA Elongation factor G 64.009 DTGTGDTLC*GEK 188
fusA Elongation factor G 64.009 KC*DPVILEPMMK 134.61
fusA Elongation factor G 64.009 KEFNVEC*NVGAPMVSYR 171.39
fusA Elongation factor G 64.009 QATTNVEFYPVLC*GTAFK 81.594
rocD2 Ornithine aminotransferase 2 43.417 EEGLLC*K 133.86
hutU Urocanate hydratase 60.632 GLSIEC*K 80.231
narH NarH protein 59.446 RDEDGIVLVDQDAC*R 95.988
SAOUHSC_00882 Uncharacterized protein 15.517 LTIIDPHETFC*QR 93.839
SAOUHSC_02811 Uncharacterized protein 27.165 EC*ATEITEVEDK 115.68
NWMN_2186 Acyl-CoA dehydrogenase-related protein 34.413 METLLLC*AR 163.9
fabF 3-Oxoacyl-[acyl-carrier protein] synthase 2 42.433 ALSTNDDIETAC*R 94.61
fabF 3-Oxoacyl-[acyl-carrier protein] synthase 2 42.433 GPNGATVTAC*ATGTNSIGEAFK 70.501
N/A Putative uncharacterized protein 24.022 VDMIAC*EDTR 92.295
ppaC Probable manganese-dependent inorganic pyrophosphatase 34.068 AEPVGC*TATILYK 136.26
ppaC Probable manganese-dependent inorganic pyrophosphatase 34.068 IANFETAGPLC*YR 229.02
ppaC Probable manganese-dependent inorganic pyrophosphatase 34.068 SPTC*TQQDVK 163.33
AYM28_13750 Nicotianamine synthase 31.096 SLQYITAQC*VK 120.21
HMPREF0769_12162 Transketolase, pyridine binding domain protein 36.033 SNNDWQC*PLTIR 110.57
nos Nitric oxide synthase oxygenase 41.71 EC*HYETQIINK 55.899
nos Nitric oxide synthase oxygenase 41.71 YAGYDNC*GDPAEKEVTR 147.84
SAKOR_00998 Hydroxymethylpyrimidine transport ATP-binding protein 53.302 VLLLGPSGC*GK 54.898
SAOUHSC_01872 Uncharacterized protein 46.176 C*SQFVYK 68.657
SAV2122 Putative aldehyde dehydrogenase SAV2122 51.968 VVNNTGQVC*TAGTR 225.69
SAOUHSC_02064 Phi ETA orf 25-like protein 15.401 DVNLTWIC*K 79.089
HUNSC491_pPR9_p11 ATP-binding protein p271 (ATP-binding protein, putative) 7.4555 YQYIGIC*YGQPGVGK 91.065
AYM28_02415 Acetyltransferase (GNAT) family protein 19.908 AQEYSTVVVDHC*FDYFEK 87.963
accD Acetyl-coenzyme A carboxylase carboxyl transferase subunit β 31.52 IIDYC*TENR 143.42
ldh2 l-lactate dehydrogenase 2 (l-LDH 2) 34.42 AGEYEDC*KDADLVVITAGAPQKPGETR 129.82
gltX Glutamate–tRNA ligase 18.695 C*YMTEEELEAER 204.18
srpF Alpha-helical coiled-coil protein 19.257 TYVC*EDMSK 193.22
mnmA tRNA-specific 2-thiouridylase MnmA 42.15 DSTGIC*FIGEK 84.173
mnmA tRNA-specific 2-thiouridylase MnmA 42.15 TPNPDVMC*NK 145.52
V070_01284 Uncharacterized protein 48.871 LPYTLC*YISR 145.61
tmk Uncharacterized protein 51.081 AQLIEC*LEK 79.886
trxA_1 Thiol reductase thioredoxin 11.454 IDLNFYPQFC*K 83.204
pdxT Pyridoxal 5′phosphate synthase subunit PdxT 20.63 VGQGVDILC*K 126.71
mcsB Protein-arginine kinase 38.61 SLGILQNC*R 63.694
ydaG General stress protein 26 15.886 EDPELC*VLR 152.7
HMPREF0769_12370 SWIM zinc finger domain protein 15.906 GFNYYQSEC*VINLK 157.73
HMPREF0769_10247 Oxidoreductase, FAD-binding protein 42.831 AFLANKPEIYIC*GGTK 107.15
tarI1 Ribitol-5-phosphate cytidylyltransferase 1 26.656 SILSDAC*K 122.69
SACOL2177 Zinc-type alcohol dehydrogenase-like protein 32.773 QETTEWC*EK 218.02
SAOUHSC_02146 Uncharacterized protein 40.354 ESGC*TVFQGK 93.345
SAOUHSC_02146 Uncharacterized protein 40.354 LILENC*R 125.68
SACOL2396 Uroporphyrinogen III methylase SirB, putative 36.29 INDC*IVEAAR 113.37
glpK Glycerol kinase 55.625 ATLESLC*YQTR 158.91
glpK Glycerol kinase 55.625 QTQSIC*SELKQQGYEQTFR 125.84
HMPREF3211_00337 Methyltransferase domain protein 21.763 ALDIGC*GSGLLVEK 55.031
tarJ Ribulose-5-phosphate reductase 1 38.451 IPEGLTFDHAFEC*VGGR 60.968
MW2550 MW2550 protein 29.096 LLIMC*GK 113.41
gpmI 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase 56.423 AIEAVDEC*LGEVVDK 144.75
SAR1875 Putative membrane protein insertion efficiency factor 8.9865 FYPTC*SEYTR 109.95
serS Serine–tRNA ligase 48.639 EISSC*.SNC*.TDFQAR 122.29
serS Serine–tRNA ligase 48.639 FTGQSAC*FR 123.26
serS Serine–tRNA ligase 48.639 MTGILC*R 123.21
serS Serine–tRNA ligase 48.639 VILC*TGDIGFSASK 124.45
MW2545 MW2545 protein 25.27 GC*TLILDEAK 83.204
femB Aminoacyltransferase FemB 49.675 YLQQHQC*LYVK 83.53
mfd Transcription-repair-coupling factor 134.3 LLC*GDVGYGK 84.605
N/A Kanamycin nucleotidyl transferase protein 27 IC*YTTSASVLTEAVK 119.62
sdhA SdhA protein 65.502 EIFDVC*INQK 265.75
sdhA SdhA protein 65.502 GLFAAGEC*DFSQHGGNR 110.77
HMPREF0769_12639 PHP domain protein 8.9913 ASLQVAC*ENGK 121.95
SAZ172_1861 Ribosomal large subunit pseudouridine synthase D-like protein 31.387 C*VSPTGQR 88.056
NWMN_0748 Uncharacterized protein 28.19 GIVTMC*APMGGK 138.55
SAZ172_0851 Pathogenicity island protein 15.839 IIC*DFSTEREEK 134.38
SAKOR_01965 RecT protein 16.895 NQC*YFIPYGNK 86.772
gtf1 Glycosyltransferase Gtf1 58.273 SSFVTC*YLQNEQK 187.56
fbp Fructose-1,6-bisphosphatase class 3 76.213 VC*LANLLR 91.087
glmU Bifunctional protein GlmU [includes: UDP-N-acetylglucosamine pyrophosphorylase] 48.532 EGTTIVVC*GDTPLITK 109.28
glmU Bifunctional protein GlmU [includes: UDP-N-acetylglucosamine pyrophosphorylase] 48.532 TNIGC*GTITVNYDGENK 155.26
SAOUHSC_02464 Uncharacterized protein 32.803 NIEAC*TSLK 62.162
trxA_2 Thiol reductase thioredoxin 12.141 FEAGWCPDC*R 119.87
aroC Chorismate synthase 43.059 VAVGALC*K 123.35
MW0527 MW0527 protein 23.895 AC*GLTEPSSK 168.85
MW0527 MW0527 protein 23.895 C*GEVATQSAFK 97.273
lolD_1 ABC transporter ATP-binding protein 24.698 AC*IIVTHDER 73.435
pckA Phosphoenolpyruvate carboxykinase 59.377 NGVFNIEGGC*YAK 207.21
glmS Glutamine–fructose-6-phosphate aminotransferase 65.835 C*GIVGYIGYDNAK 159.41
ST398NM01_0974 Uncharacterized protein 81.447 GELHC*IGATTLNEYR 166.21
SAV0406 Uncharacterized protein 29.041 GWNTLC*TYLK 147.39
SAOUHSC_02980 Uncharacterized protein 20.729 SC*DIESVESWK 130.19
lysA_1 Diaminopimelate decarboxylase 9.757 AFTC*IQMVK 106.26
HMPREF0776_0362 HTH domain protein 26.531 QC*LSLPQTR 63.966
SAKOR_02509 Transcriptional regulator, MarR family protein 16.544 VYMAC*LTEK 137.01
SAOUHSC_00118 Capsular polysaccharide biosynthesis protein Cap5E, putative 38.591 SEQTLIC*GTR 184.51
SAOUHSC_00118 Capsular polysaccharide biosynthesis protein Cap5E, putative 38.591 VIC*LSTDK 157.66
SAOUHSC_02364 Uncharacterized protein 12.686 MEVC*PYLEETFK 158.89
SAOUHSC_02584 Uncharacterized protein 30.385 AC*HETVLK 114.97
SAOUHSC_02584 Uncharacterized protein 30.385 GEGAFC*NGIK 114.72
SAOUHSC_02584 Uncharacterized protein 30.385 LIC*SWLK 118.33
map Methionine aminopeptidase 27.358 EIGYIC*AK 128.86
QU38_16080 Acyl-CoA ligase 59.748 LGVAIIPC*SEMLR 111.07
AYM28_10805 6-Phosphogluconolactonase 38.546 AGTGC*YVSISEDKR 105.63
AYM28_10805 6-Phosphogluconolactonase 38.546 EGEQC*GVASLK 153
AYM28_10805 6-Phosphogluconolactonase 38.546 ITLC*DNTR 151.13
SAOUHSC_02891 Uncharacterized protein 21.555 SCELNSEAFC*NK 123.72
SA2075 Sulfur carrier protein FdhD 19.75 LYGFC*IQR 106.68
pth Peptidyl-tRNA hydrolase 21.703 C*IVGLGNIGK 84.31
dnaK Chaperone protein DnaK 66.361 IIGIDLGTTNSC*VTVLEGDEPK 89.507
SAOUHSC_01064 Pyruvate carboxylase 18.812 C*AEEGIK18.812 77.73
sarR HTH-type transcriptional regulator SarR 13.669 C*SEFKPYYLTK 98.421
lepA Elongation factor 4 28.674 C*YGGDISR 128.35
asnS Asparagine–tRNA ligase 49.157 SVLENC*KLELK 125.97
pfkA ATP-dependent 6-phosphofructokinase 34.839 C*PEFKEQEVR 108.97
SAKOR_01872 Uncharacterized protein 12.527 FILSTSDDSDYIC*K 91.589
lipA_2 Lipoyl synthase 34.885 HC*QAGPLVR 83.08
lipA_2 Lipoyl synthase 34.885 NLNTVC*EEAK 222.56
V070_00687 Uncharacterized protein 27.971 LINPDC*K 128.35
SAOUHSC_00532 Uncharacterized protein 42.89 NDAILSDELNHASIIDGC*R 87.411
rnj2 Ribonuclease J 2 (RNase J2) 62.603 LIVSC*YASNFIR 118.71
MW1645 MW1645 protein 44.233 C*FEIEER 74.165
miaB_1 MiaB family protein, possibly involved in tRNA or rRNA modification 50.955 STVAFHTLGC*K 79.614
ung Uracil-DNA glycosylase (UDG) 24.967 ELADDIGC*VR 138.24
glpD Aerobic glycerol-3-phosphate dehydrogenase 62.387 KDYGLTFSPC*NTK 250.46
SAV0941 NADH dehydrogenase-like protein 44.104 IATPIVAC*NEK 236.05
SAV0941 NADH dehydrogenase-like protein 44.104 IPELC*SK 154.01
MW2452 MW2452 protein 24.558 LDC*KDEFIK 89.189
SA1530 Uncharacterized peptidase 39.606 QVLFC*PK 132.76
pheT_2 Phenylalanine–tRNA ligase β subunit 12.153 GVASSGMIC*SMK 86.772
SAKOR_02579 Putative cytosolic protein 11.547 YMFDYSAC*K 90.614
AYM28_07495 DNA-binding protein 12.72 HYQQLINQC*K 121.29
gcvPB Probable glycine dehydrogenase (decarboxylating) subunit 2 22.485 NFGVDNGFYPLGSC*TMK 102.15
NWMN_0123 Uncharacterized protein 151.91 SLLEC*VK 99.013
adh Alcohol dehydrogenase (ADH) 36.061 LDPAAASSITC*AGVTTYK 210.33
dnaJ DnaJ 29.458 TEQVC*PK 88.495
guaB Inosine-5′-monophosphate dehydrogenase 52.85 VGIGPGSIC*TTR 119.46
N/A UPF0413 protein 25.089 C*QAQSTSNFDNIALAYK 125.39
SAKOR_00478 VEG protein 9.9982 NSIDC*HVGNR 76.868
mutS MutS protein 48.889 SEYQDC*LLFFR 79.885
mutS MutS protein 48.889 VAIC*EQMEDPK 125.36
yibN Putative sulfur transferase 14.803 KDQPVYLC*DANGIASYR 78.191
ileS Isoleucine–tRNA ligase 104.74 C*KEFALEQIELQK 116.61
SAOUHSC_01907 Uncharacterized protein 31.471 VENDENC*MESVK 159.04
nagB Glucosamine-6-phosphate deaminase 28.467 QASFYVAC*ELYK 106.82
SAKOR_02240 Molybdenum cofactor biosynthesis protein B 18.5 DFDTDKGGQC*VR 93.716
nirB Nitrite reductase [NAD(P)H], large subunit 46.979 SC*VESGVK 65.627
tetM Tetracycline resistance protein TetM 70.346 GPSELC*GNVFK 69.261
thyA Translation initiation factor IF-3 36.825 LSC*QLYQR 55.721
SAOUHSC_01781 Uncharacterized protein 36.431 FANC*TQELTIEK 110.6
miaB Uncharacterized protein 58.916 AWVNIMYGC*DK 135.91
miaB RNA methyltransferase TrmA family protein 58.916 YEGQTVTVLC*EGSSK 188.32
pgcA Fructose-1,6-bisphosphate aldolase 62.376 C*PNFDDVAQK 151.3
SAKOR_02003 Ribosomal protein-serine acetyltransferase 27.906 C*HNSFVVNR 98.407
SAKOR_02003 Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase TrmFO 27.906 IFIC*EDDPK 142.19
SAKOR_02003 Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase TrmFO 27.906 IIDC*LETAHTR 170.95
SAV1153 Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase TrmFO 19.255 GNC*DFYPEFENEAVAK 76.341
ftsH Peptide methionine sulfoxide reductase MsrB 77.812 IC*GLLGGR 124.08
HMPREF0769_10485 Putative peptide methionine 18.28 LDSPYDGYAEC*VK 115.26
sepF Cell division protein SepF 20.686 MC*LFEPR 120.15
SAOUHSC_02898 Uncharacterized protein 24.931 VNSLAYC*SSK 128.85
sucC Succinate-CoA ligase [ADP-forming] subunit β 42.056 C*DVIAEGIVEAVK 189.04
sucC Succinate-CoA ligase [ADP-forming] subunit β 42.056 RLYIEEGC*AIQK 231.07
SA2102 Putative formate dehydrogenase 111.29 FAEEC*AK 160.82
SA2102 Putative formate dehydrogenase 111.29 GHNNVQGC*SDMGSMPDK 88.108
SA2102 Putative formate dehydrogenase 111.29 QVIGTNNVDNC*SR 175.19
SA2102 Putative formate dehydrogenase 111.29 YC*QAPATK 117.25
SAKOR_00737 Ferric anguibactin transport ATP-binding protein 28.62 STLLSAIC*R 103.43
SAOUHSC_01323 Uncharacterized protein 29.821 QDFDEIVDYC*R 127.05
SAOUHSC_02248 Uncharacterized protein 17.196 IIGLSGMC*K 68.132
taqD Glycerol 3-phosphate cytidyltransferase 15.789 C*EVIYLK 51.528
AYM28_05950 Uncharacterized protein 15.185 FQMINDC*AEK 64.52
queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase 38.97 IIAEC*IK 138.08
SAOUHSC_00086 3-Ketoacyl-acyl-carrier protein reductase, putative 27.215 IINATSQAGVEGNPGLSLYC*STK 70.572
glcT Protein GlcT 32.822 NHYPIC*YNTAYK 118.52
AYM28_01135 AraC family transcriptional regulator 29.599 VVIC*DDER 129.82
AYM28_01135 AraC family transcriptional regulator 29.599 YLQMSPSDYC*K 115.09
AYM28_13045 Putative 3-methyladenine DNA glycosylase 22.771 AIDGATLNDC*R 116.58
tyrC Arogenate dehydrogenase 40.395 C*LNYSEAIK 68.676
SAOUHSC_02899 Uncharacterized protein 38.194 AIELC*QK 143.37
SAR2150 Protein SprT-like 17.186 ANYEYYC*TK 166.62
SAR2150 Protein SprT-like 17.186 FC*NSIESYQQR 97.797
SA0314 Uncharacterized protein 20.027 LDC*AEIIR 73.841
SA1974 Probable uridylyltransferase 44.865 LVNVDC*K 82.417
hemH Ferrochelatase 35.056 VVC*DDIGANYYRPK 112.24
hpt Hypoxanthine-guanine phosphoribosyltransferase 20.154 EVLLTEEDIQNIC*K 103.39
SAOUHSC_00548 Uncharacterized protein 58.418 GFLSC*SR 94.309
SAOUHSC_00531 Uncharacterized protein 43.657 VRPGAFFLTGC*GNESK 74.296
tnp Putative transposase 8.5839 GIEC*IYALYK 90.614
cap5G Capsular polysaccharide biosynthesis protein Cap5G 42.851 C*FDQNVPEEINR 186.96
SAOUHSC_00973 Uncharacterized protein 27.727 VC*YQVFYDEK 138.02
ykaA Phosphate transport regulator 22.598 EFETNC*DGILR 133.48
hprK HPr kinase/phosphorylase 34.481 LC*RPETPAIIVTR 98.508
murA1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 44.995 LGHAIVALPGGC*AIGSR 67.846
rocA 1-Pyrroline-5-carboxylate dehydrogenase 56.867 GC*TSAVVGYHPFGGFK 103.67
HMPREF0769_10271 Oxidoreductase, NAD-binding domain protein 39.204 AAC*AAEAYGTDNAK 78.917
ahpC Alkyl hydroperoxide reductase 20.976 KNPGEVC*PAKWEEGAK 127.78
mvaS HMG-CoA synthase 43.217 EAC*YAATPAIQLAK 226.7
SAKOR_00677 Cytokinin riboside 5′-monophosphate phosphoribohydrolase 20.889 ALAPLC*DTK 137.4
SAKOR_00677 Cytokinin riboside 5′-monophosphate phosphoribohydrolase 20.889 IAVYC*GASK 122.33
pcrA ATP-dependent DNA helicase PcrA 84.073 IC*YVAITR 109.83
N/A Putative uncharacterized protein 15.429 EQGSDIDAAC*GQLR 137.52
rimP Ribosome maturation factor RimP 17.627 EGGVDLNDC*TLASEK 197.6
asp1 Accessory Sec system protein Asp1 53.78 EC*ITSVNEEYQAK 188
SAUSA300_2158 Uncharacterized protein 14.457 DDNILC*EEFSYK 79.393
SAKOR_00594 Trp repressor-binding protein 20.243 VILVGGDC*PK 186.76
SAOUHSC_02447 Uncharacterized protein 36.266 VPVC*GAISSYNHPEADIGPR 126.62
SAOUHSC_00497 Uncharacterized protein 53.954 NGLTLQEC*LDR 114.64
SAOUHSC_00497 Uncharacterized protein 53.954 SIFPSC*R 68.557
pyk Pyruvate kinase 63.102 C*DILNSGELK 126.71
pyk Pyruvate kinase 63.102 IVC*TIGPASESEEMIEK 96.561
pyk Pyruvate kinase 63.102 QC*SIVWGVQPVVK 172.11
rpoB DNA-directed RNA polymerase subunit β 133.22 FMDDEVVC*R 92.247
yigZ ABC transporter 23.868 EAVPC*IVTLNYDQTGK 120.21
yigZ ABC transporter 23.868 LDVHNAC*VVVTR 98.182
N/A Uncharacterized protein 32.909 NESLC*ELKK 140.63
SAOUHSC_01365 Uncharacterized protein 37.855 SHLVNLC*K 99.788
SA2162 Ferredoxin–NADP reductase 38.164 C*NTLLSETSSK 186.08
SA2162 Ferredoxin–NADP reductase 38.164 LDMHDDC*R 64.224
infC Translation initiation factor IF-3 20.244 YADEC*KDIATVEQKPK 88.311
SAOUHSC_02827 Uncharacterized protein 10.548 IIASC*SFAK 135.1
SAOUHSC_02579 Uncharacterized protein 41.89 VLYQGYTC*FR 109.99
NWMN_1835 RNA methyltransferase TrmA family protein 51.682 IVYISC*NPATQQR 216.34
fba Fructose-bisphosphate aldolase 30.836 EC*QELVEK 97.472
SAKOR_00338 Ribosomal protein-serine acetyltransferase 20.294 YC*FEELDLNR 77.644
trmFO Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase 48.371 FAELVC*SNSLR 144.4
trmFO Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase 48.371 YDKGEAAYLNC*PMTEDEFNR 90.259
trmFO Methylenetetrahydrofolate–tRNA-(uracil-5-)-methyltransferase 48.371 YFEGC*MPFEVMAER 85.937
msrB Peptide methionine sulfoxide reductase MsrB 16.277 FHSEC*GWPSFSK 125.33
msrB Peptide methionine sulfoxide reductase MsrB 16.277 YC*INSAAIQFIPYEK 144.3
ytqA Fe–S oxidoreductase 36.053 VALDGGFDC*PNR 116.87
yjlD NADH dehydrogenase 39.399 IYNC*DEPK 160.72
SAZ172_2586 Mutator mutT protein 11.465 C*DLIVGDK 63.073
AYM28_03635 Protein of uncharacterized function 14.312 IMYC*FNK 132.08
SAKOR_01397 ATP-dependent helicase, DinG family protein 104.19 C*LVLFTSYK 112.13
SAOUHSC_02393 Uncharacterized protein 25.34 C*LANNDVQIMNSIK 78.674
panD Aspartate 1-decarboxylase 14.05 IC*LNGAASR 112.64
purA Adenylosuccinate synthetase 47.551 IC*TAYELDGK 104.59
fhs Formate–tetrahydrofolate ligase 59.871 QFKENGWDNYPVC*MAK 200
SAZ172_2084 5-Amino-6-(5-phosphoribosylamino)uracil reductase 15.666 AFQILHEQYGC*K 51.727
gatB_2 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 53.656 C*DANISLRPYGQEK 76.574
SAZ172_2659 d-specific d-2-hydroxyacid dehydrogenase-like protein 37.264 DAVFVNC*AR 73.435
folP Dihydropteroate synthase 29.532 SEVAEAC*LK 115.33
AYM28_03210 Deoxyguanosinetriphosphate triphosphohydrolase 50.595 GGEVLLNNC*LK 164.22