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. Author manuscript; available in PMC: 2020 Jun 17.
Published in final edited form as: Parasitology. 2019 Dec 17;147(8):855–864. doi: 10.1017/S0031182019001689

Table 1.

Animal and human parasitic nematode species for which microRNA data is available from parasite extracts, extracellular vesicles (EV), excretory-secretory supernatant (ES), or released into host serum/plasma. From small RNA sequencing data, unless indicated otherwise.

Nematode species (clade) Developmental stage/host sample Small RNA class GEO Acc No./in MiRBase Reference
Angiostrongylus cantonensis (V) Male and female adults miRNA, siRNA NA/No Chen et al., 2011a
Ascaris lumbricoides (III) Female adults miRNA NA/No Shao et al., 2104
Ascaris suum (III) Germline, zygote, embryo, L1-L3 miRNA, siRNA GSE 26956,GSE 26957/Yes Wang et al., 2011
Male and female adults miRNA NA/No Xu et al., 2013
Female adults miRNA NA/No Shao et al., 2104
Brugia malayi III) Male and female adults, mf miRNA, siRNA NA/Yes Poole et al., 2010
Male and female adults, mf miRNA NA/Yes Poole et al., 2014
L3 EV miRNA SRA PRJNA 285132/No Zamanian et al., 2015
Brugia pahangi (III) L3, mixed sex adults miRNA, siRNA GSE 34539/Yes Winter et al., 2012
L3, L4, male and female adults miRNA microarray NA/No Winter et al., 2015
Infected dog plasma miRNA NA/No Tritten et al., 2014a
Dirofilaria immitis (III) Mixed sex adult worms miRNA GSE 35646/No Fu et al., 2013
Infected dog plasma miRNA NA/No Tritten et al., 2014a
Haemonchus contortus (V) L3, mixed sex adults miRNA, siRNA, piRNA GSE 34539/Yes Winter et al., 2012
L3, L4, male and female adults, gut miRNA microarray GSE 101501/No Marks et al., 2019
L4 EV and ES, adult EV and ES miRNA NA/No Gu et al., 2017
Heligmosomoides polygyrus (V) Egg, L3, adults, adult EV and ES miRNA, siRNA,piRNA,YRNA GSE 55941/Yes Buck et al., 2014
Litomosoides sigmodontis (III) Infected mouse serum miRNA GSE 55978/No Buck et al., 2014
Loa loa (III) Infected baboon plasma miRNA NA/No Tritten et al., 2014b
Onchocerca ochengi (III) Infected cow plasma miRNA NA/No Tritten et al., 2014b
Infected cow nodule fluid miRNA GSE 63933/No Quintana et al., 2015
Onchocerca volvulus (III) Infected human serum miRNA NA/No Tritten et al., 2014a
Infected human serum miRNA GSE 63933/No Quintana et al., 2015
Strongyloides ratti (IV) Infective L3 and mixed stage miRNA GSE 41402/Yes Ahmed et al., 2013
Toxocara canis (III) Male and female adults miRNA GSE 68710/No Ma et al., 2016
Trichinella spiralis (I) Muscle stage larvae miRNA NA/No Chen et al., 2011b
Trichuris muris (I) Mixed sex adult EV miRNA GSE 93667/No Tritten et al., 2017