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. Author manuscript; available in PMC: 2020 Nov 30.
Published in final edited form as: HGG Adv. 2020 Aug 25;1(1):100008. doi: 10.1016/j.xhgg.2020.100008

Figure 4. Inherited variants potentially contributing to etiology of CDH probands.

Figure 4.

(A) Compound heterozygous (boxed in dark purple) or homozygous (boxed in light purple) inherited variants highly ranked as damaging and rare by VAAST (with pseudogenes, highly mutable genes, and genes expressed at low levels in PPFs filtered out). Genes in bold and in larger font harbor variants that are ranked as more damaging (see Table S4 and its legend).

(B) Candidate genes with inherited variants overlaid on all genes expressed in mouse PPFs at E12.5. RNA-seq reads normalized using TPM. Black line denotes TPM = 0, and red dashed line denotes TPM = 10.