Table 2.
Pattern | Training ASD + /subgroup | Validation ASD + /subgroup | ASD/ Subgroup | Precision | Precision drop | Total ASD % (n=450) | Fisher’s exact test p-value | OR (95% CI)a | OR p-value |
---|---|---|---|---|---|---|---|---|---|
CRMP1+GDA | 15/15 | 4/4 | 19/19 | 1.00 | 0.00 | 4.2 | <0.0001 | 31.04 (1.8678 to 516.0620) | 0.0166 |
CRMP1+CRMP2 | 12/12 | 4/4 | 16/16 | 1.00 | 0.00 | 3.6 | 0.0001 | 26.08 (1.5596 to 436.4170) | 0.0233 |
NSE+STIP1 | 8/8 | 6/6 | 14/14 | 1.00 | 0.00 | 3.1 | 0.0005 | 22.82 (1.3565 to 383.9379) | 0.0299 |
CRMP2+STIP1 | 6/6 | 3/3 | 9/9 | 1.00 | 0.00 | 2 | 0.0064 | 14.78 (0.8573 to 254.8841) | 0.0637 |
LDHA+YBOX | 1/1 | 5/5 | 6/6 | 1.00 | 0.00 | 1.3 | 0.0393 | 10.04 (0.5640 to 178.9532) | 0.1164 |
LDHB+YBOX | 2/2 | 4/4 | 6/6 | 1.00 | 0.00 | 1.3 | 0.0393 | 10.04 (0.5640 to 178.9532) | 0.1164 |
GDA+YBOX | 5/5 | 1/1 | 6/6 | 1.00 | 0.00 | 1.3 | 0.0393 | 10.04 (0.5640 to 178.9532) | 0.1164 |
STIP1+YBOX | 4/5 | 7/7 | 11/12 | 0.92 | 0.08 | 2.4 | 0.0161 | 8.56 (1.1010 to 66.7020) | 0.0402 |
CRMP1+STIP1 | 15/17 | 3/3 | 18/20 | 0.90 | 0.10 | 4 | 0.0022 | 7.10 (1.6371 to 30.8292) | 0.0088 |
Abbreviations: ASD, Autism Spectrum Disorders; OR: odds ratio; CI, confidence interval. CRMP1 and CRMP2, collapsin response mediator proteins 1 and 2; GDA, guanine deaminase; NSE, neuron specific enolase; LDHA-B, lactate dehydrogenase A and B; STIP1, stress induced phosphoprotein 1 and YBOX, Y-box binding protein 1.
Fisher’s exact (two-sided) was used to evaluate the association of the patterns with ASD diagnosis and p-values > 0.05 were bolded and considered significant.
A 0.5 continuity correction was applied to OR calculations for observations with zero cell counts, since all the patterns in this table are ASD specific, all the TD cells were equal to zero, the correction was applied to all OR calculations in this table.