TABLE 5.
Best three signals for each PGC dataset
| Trait | rs_id | chr | bp | P pval | Info | MAF | Genes/Distance (Kbp) |
|---|---|---|---|---|---|---|---|
| ADHD | rs568113293 | 11 | 54,899,533 | 7.40 * 10 −16 | 0.0189 | 0.00049 |
TRIM48,130.125
RP11–72 M10.2,135.351 |
| rs544637819 | 3 | 15,310,737 | 1.78 * 10−14 | 0.1543 | 0.00171 |
SH3BP5, 0
SH3BP5-AS1,4.737 |
|
| chr6:30450452 | 6 | 30,450,452 | 6.44 * 10−13 | 0.0698 | 0.00151 |
RANP1, 3.265
HLA-E, 6.792 |
|
| AUT | rs138098629 | 22 | 36,584,165 | 8.01 * 10−15 | 0.4980 | 0.00063 |
APOL4, 1.007 MTND1P10, 8.732 |
| BIP | rs76350051 | 7 | 64,164,245 | 2.42 * 10 −37 | 0.0417 | 0.00046 |
ZNF107, 0
RP11–561 N12.7, 16.474 |
| rs138549126 | 3 | 52,592,843 | 6.65 * 10 −16 | 0.073 | 0.00052 |
SMIM4, 0
PBRM1, 0 |
|
| rs149257260 | 15 | 71,600,045 | 1.40 * 10−15 | 0.4246 | 0.00017 |
THSD4, 0
RP11–592 N21.1, 33.421 |
|
| ED | rs78958069 | 8 | 43,539,021 | 4.17 * 10−10 | 0.005 | 0.0002 |
RP11–643 N23.2, 10.803 AC134698.1, 123.105 |
| rs144485994 | 20 | 4,963,320 | 5.18 * 10−9 | 0.15 | 0.0001 |
SLC23A2, 0 RP5–1116H23.1, 30.846 |
|
| MDD | rs567868887 | 12 | 31,931,432 | 1.57 * 10 −55 | 0.2800 | 0.00098 |
H3F3C, 12.691
RP11–467 L13.5, 23.377 |
| rs112241719 | 11 | 111,514,969 | 8.14 * 10 −45 | 0.4900 | 0.00025 |
SIK2, 0
AP000925.2, 26.711 |
|
| rs182264017 | 1 | 188,992,506 | 5.05 * 10 −44 | 0.2775 | 0.00035 |
LINC01035, 0
CLPTM1LP1, 12.586 |
|
| PTSD | rs150642422 | 1 | 89,223,553 | 1.3 * 10 −43 | 0.5512 | 0.0002 |
PKN2, 0
RNU6–125P, 58.909 |
| rs7521099 | 1 | 88,875,371 | 1.4 * 10−15 | 0.4521 | 0.0002 | GBP3, 248.796 | |
| rs111229512 | 2 | 31,800,662 | 6.7 * 10−14 | 0.6325 | 0.0002 |
BP7, 373.881
GBP4, 423.278 |
|
| PTSD-AA | rs111819353 | 7 | 127,907,569 | 1.1 * 10 −17 | 0.312 | 0.001 |
LEP, 9.8
RBM28, |
| rs370549636 | 20 | 58,131,312 | 7.2 * 10−15 | 0.37 | 0.001 |
PHACTR3, 21.252
PIEZO1P1,95.42 |
|
| rs554371692 | 13 | 20,632,168 | 3.2 * 10−12 | 0.21 | 0.001 |
ZMYM2, 0 KRR1P1, 21.222 |
|
| SCZ | rs559199817 | 3 | 17,267,731 | 1.30 * 10 −87 | 0.0213 | 0.00073 |
TBC1D5, 0
AC090644.1, 90.517 |
| rs143337489 | 12 | 11,2089,686 | 9.26 * 10 −46 | 0.2464 | 0.00019 |
BRAP, 0
PCNPP1, 17.97 |
|
| rs193224736 | 16 | 8,593,132 | 3.79 * 10 −21 | 0.28476 | 0.00018 |
RP11-483 K5.3, 11.117
TMEM114, 26.37 |
Abbreviations: ADHD, attention deficit hyperactive disorder; AUT, autism; BIP, bipolar; ED, eating disorder; MAF, minor-AF; MDD, major depressive disorder; PTSD, post-traumatic stress disorder; PTSD-AA, Africanpost-traumatic stress disorder; SCZ, schizophrenia.
Note: Bolded and underlined entries correspond to the most stringent threshold of p < 3 * 10−15, not bolded but underlined to the second most conservative threshold 3 * 10−15 < p < 10−12 and not bolded not underlined 10−12 < p < 5 * 10−8.