Skip to main content
. Author manuscript; available in PMC: 2021 Nov 9.
Published in final edited form as: Cell Rep Methods. 2021 Jun 30;1(3):100040. doi: 10.1016/j.crmeth.2021.100040

Figure 1. Genome-scale metabolic models can be used to infer the activity of a defined list of metabolic functions.

Figure 1.

(A) Metabolic tasks are a modeling concept that we extend here to infer metabolic functions from transcriptomic data.

(B) We curated and reconciled a collection of 195 tasks, derived in large part from earlier modeling studies (i.e., Recon2 and iHsa). The original source of each task and comments on the biological evidence of the associated metabolic function are presented in Table S1.

(C) The list of curated tasks covers seven main metabolic systems.