Reagent or resource | Source | Identifier |
---|---|---|
Deposited data | ||
RNA-Seq data for the 32 human tissues | Uhlén et al., 2015 | proteinatlas.org |
Adult mouse brain single-cell transcriptomic dataset | Saunders et al., 2018 | dropviz.org |
Human brain single-cell transcriptomic dataset from ROSMAP (Religious Orders Study and Memory Aging Project). | Bennett et al., 2018 | radc.rush.edu |
Software and algorithms | ||
GenePattern | Reich et al., 2006 | genepattern.org |
Cobra Toolbox 3.0 | Heirendt et al., 2019 | github.com/opencobra/cobratoolbox |
Escher | King et al., 2015 | escher.github.io |
Other | ||
iMM1415 | Sigurdsson et al., 2010 | bigg.ucsd.edu |
Recon2.2 | Swainston et al., 2016 | bigg.ucsd.edu |