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. Author manuscript; available in PMC: 2022 Oct 14.
Published in final edited form as: Proteins. 2021 Oct 10;89(12):1647–1672. doi: 10.1002/prot.26247

FIGURE 9.

FIGURE 9

Structures of J-DNA binding domains. From left to right: the structure of JBP1-DBD is the closest homologue to the CASP14 target crystallographic structure of JBP3-DBD that is shown next to it; the AlphaFold2 model has all independent evidence in essentially identical orientation as the experimental structure; the second best model (from the Baker group) shows a different orientation for the α5 helix and the N-terminal region.