Table 1.
Location of sample collection | No. of patients samples | HCoV RT-PCR | Patient | Sample | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Pos. sample | Primer setsd | Age median | Males | CAAe | Throat swab | NP swab | Scraped NP cells | Nasal wash | Illness Dayf (median) | Samples post-IVIG | ||
CA, USA | 17 (23) | 1 | A–J | 2m-9y (30 m) | 15 | 1/6 | 8 | 7 | 8 | 0 | 3–15 (6.5) | 2 |
IL, USA | 13b (15) | 0 | J–O | 4m-10y (38 m) | 11 | 1/5 | 13 | 0 | 2 | 0 | 4–9 (6) | 0 |
12c (12) | 0 | A–C | 4m-6y (12 m) | 11 | 1/3 | 12 | 0 | 0 | 0 | 3–9 (6.5) | 0 | |
NL | 7 (7) | 0 | P–R, J–L | 5m-9y (35 m) | 5 | 1/2 | 0 | 0 | 0 | 7 | 4–9 (7) | 2 |
Total | 48 (57) | 1 | 2m-10y (31 m) | 42 | 4/16 | 33 | 7 | 10 | 7 | 3–15 (7) | 4 |
Reproduced with permission from Shimizu et al., “Human coronavirus NL63 is not detected in the respiratory tract of children with acute Kawasaki disease”, The Journal of Infectious Diseases 2005; 192: (in press).
Samples analyzed at Northwestern University and Loyola University, one sample was also tested at Vanderbilt University.
Samples analyzed at Vanderbilt University, one sample was also tested at Northwestern University and Loyola University.
Primer sets A-C, N, O, R = primer sets from HCoV-NL63 nucleocapsid protein gene, D-F, M, and P with nested primer st Q = primer sets from HCoV-NL63 ORF1b; J = primer sets from HCoV-NH ORF1a; K with nested primer set L = primer sets from HCoV-NH spike glycoprotein gene. G-I = degenerate primer sets from conserved regions of the ORF1b shared by HCoV-NL63, severe acute respiratory syndrome (SARS)-CoV (NC_004718), HCoV-E229 (NC_002645), and HCoV-OC43 (NC_005147).
CAA = coronary artery abnormality, patients with aneurysms/patients with dilatation (internal lumen z score>2.5.
Illness Day 1 = first day of fever.