. Author manuscript; available in PMC: 2011 Jan 1.

Published in final edited form as: Sci China Chem. 2010 Jan 1;53(1):52–60. doi: 10.1007/s11426-010-0011-5

Table 1.

Examples of predicted calcium binding sites in bacteria [41]

class	patterns	protein name (Accession ID) prediction	organism
I	canonical EF-hand (ELOOPF)	PlcR (PA0843)	Pseudomonas aeruginosa
I	canonical EF-hand (ELOOPF)	Shr (NF01861114)	Streptococcus pyrosenes
II	EF-hand like	hypothetical protein Ecs5257 (NF0070486)	Escherichia coli
		N-acetylmuramoyl-L-alanine amidase amiB precursor (NF0069565)	Escherichia coli
		rhamnulokinase (NF01134307)	Escherichia coli
		putative glycosyltransferase (NF01744738)	Escherichia coli
		resolvase family recombinase (NF00692267)	Escherichia coli
III	excalibur DXDXDXXXCE	YokF protein (O32001)	Bacillus subilis
IV	EHEDDSDDDD	ChaA Na⁺/Ca²⁺ antiporter (NP_415734)	Escherichia coli