Intestinal ECs release immune regulatory factors such as TSLP, RA and TGF-β1 upon sensing antigens from the lumen. These immune mediators condition DCs to generate CD103+ DCs and TipDCs. Such regulatory DCs produce more immune regulatory factors such as TGF-β1, RA, IL-10 and IL-27, which reinforce mucosal homeostasis and tolerance by promoting the development of IgA responses and regulatory T cell responses, including Treg and Tr1 responses. Treg and Tr1 cells suppress mucosal and systemic responses by TH1 cells, TH17 cells and CTLs. Such a situation may represent a challenge for mucosal vaccines aimed at eliciting mucosal and systemic T cell-mediated immunity.