Table 2.
Mean clone count | Frequency of cloning (log. scale) | |||||
---|---|---|---|---|---|---|
MicroRNA | MYC-amplified AS | MYC unamplified AS | MYC-amplified AS | MYC unamplified AS | FC | FDR |
hsa-miR-17-92 cluster | 36687 | 15609 | 6.54E-02 | 1.48E-02 | 4.4 | 4E-02 |
hsa-miR-17 | 12999 | 5137 | 2.3E-02 | 6.7E-03 | 3.4 | 1.8E-02 |
hsa-miR-18a | 4160 | 1334 | 7.7E-03 | 1.3E-03 | 5.7 | 3.3E-02 |
hsa-miR-19a | 10107 | 4744 | 1.9E-02 | 5.3E-03 | 3.6 | 1.2E-01 |
hsa-miR-20a | 9357 | 4344 | 1.6E-02 | 4.2E-03 | 3.8 | 3.5E-02 |
hsa-miR-92a | 19 | 5 | 3.8E-05 | 1.3E-05 | 2.8 | 4.4E-02 |
MicroRNA | MYC-amplified AS | Other Vascular Tumors | MYC-amplified AS | Other vascular Tumors | FC | FDR |
hsa-miR-17-92 cluster | 36687 | 7908 | 6.54E-02 | 6.89E-03 | 9,5 | 4.4E-04 |
hsa-miR-17 | 12999 | 2606 | 2,29E-02 | 2,32E-03 | 9,8 | 1,1E-03 |
hsa-miR-18a | 4160 | 609 | 7,68E-03 | 5,24E-04 | 14,6 | 5,8E-04 |
hsa-miR-19a | 10107 | 2305 | 1,89E-02 | 2,01E-03 | 9,4 | 2,2E-03 |
hsa-miR-20a | 9357 | 2326 | 1,59E-02 | 1,98E-03 | 8,0 | 5,1E-03 |
MicroRNA | MYC-amplified AS | WDLPS | MYC-amplified AS | WDLPS | FC | FDR |
hsa-miR-17-92 cluster | 36687 | 2551 | 6.54E-02 | 5.4E-03 | 12.1 | 2.2E-07 |
hsa-miR-17 | 12999 | 277 | 2.3E-02 | 4.7E-04 | 48,4 | 2.8E-12 |
hsa-miR-18a | 4160 | 158 | 7.7E-03 | 2.9E-04 | 26.3 | 1.8E-08 |
hsa-miR-19a | 10107 | 1374 | 1.9E-02 | 3.1E-03 | 6 | 7.7E-04 |
hsa-miR-20a | 9357 | 742 | 1.6E-02 | 1.5–03 | 10.8 | 4.8E-06 |
hsa-miR-92a | 19 | 0 | 3.8E-05 | 0 | NA | 2.9E-10 |
MicroRNA | MYC-amplified AS | DDLPS | MYC-amplified AS | DDLPS | FC | FDR |
hsa-miR-17-92 cluster | 36687 | 2551 | 6.54E-02 | 5.4E-03 | 12.1 | 2.2E-07 |
hsa-miR-17 | 12999 | 549 | 2.3E-02 | 5.9E-04 | 39 | 2.6E-06 |
hsa-miR-18a | 4160 | 274 | 7.7E-03 | 3.3E-04 | 23.1 | 5.2E-05 |
hsa-miR-20a | 9357 | 1444 | 1.6E-02 | 1.7E-03 | 9.4 | 1.9E-03 |
FC: fold-change; FDR: false discovery rate