Table 1.
Summary of the parameter values used in our simulations
Da | 0.1 μm2/s | diffusion of the active form A in the membrane |
Db | 10 μm2/s | diffusion of the inactive form B in the cytoplasm (deterministic system only) |
k0 | 0.067 s−1 | rate of background activation |
γ | 1 s−1 | maximal rate of auto-activation of A |
δ | 1 s−1 | rate of background inactivation |
K | 1 μM | concentration of A resulting in half-maximal rate of auto-activation (deterministic system) |
KN | … | as constant K but rescaled depending on current volume of the system (KN ∝ NAH LW·K, where NA is Avogadro’s number) |
ks | 10 s−1 | rate of activation due to transient pulse |
L | 10 μm | length of the domain |
N | 50 | number of membrane lattice points |