Table 1.
MHC class I cDNA sequences identified in Indonesian-origin cynomolgus macaques (ICM).
| ICM allele name | ICM Accession # | Reference animal | Previously described identical nucleotide sequence1 |
|---|---|---|---|
| Mafa-A alleles | |||
| Mafa-A1*060102 | EU203689 | IN04 (02367) | |
| Mafa-A1*1002 | EU203687 | IN02 (02326) | Mane-A*19 (pig-tail, EF010520);Mafa-A1*1002(unknown cynomolgus, AM295831); Mamu-A1*1001(Chinese rhesus, AM295894) (1,2) |
| Mafa-A1*1004 | EU203706 | CE19 (13659) | |
| Mafa-A1*1005 | EU203707 | CE28 (13668) | |
| Mafa-A1*1006 | EU203699 | IN12 (04146) | |
| Mafa-A1*1803 | EU203709 | CE29 (13670) | |
| Mafa-A1*2202 | EU203696 | IN07 (04132) | Mafa-A1*2202 (unknown cynomolgus, AM295835) (2) |
| Mafa-A1*4103 | EU203713 | CE16 (13655) | |
| Mafa-A1*6003 | EU203698 | IN10 (04141) | |
| Mafa-A1*6202 | EU203711 | CE12 (13651) | |
| Mafa-A1*6603 | EU203712 | CE12 (13651) | |
| Mafa-A1*7001 | EU203708 | CE28 (13668) | Mafa-A1*7001 (unknown cynomolgus, AM295858) (2) |
| Mafa-A1*780102 | EU203685 | IN01 (01095), IN02 (02326) | |
| Mafa-A1*7802 | EU203705 | CE19 (13659) | |
| Mafa-A1*8701 | EU203710 | CE29 (13670) | |
| Mafa-A1*8801 | EU203686 | IN01 (01095) | |
| Mafa-A1*8901 | EU203697 | IN10 (04141) | |
| Mafa-A1*9001 | EU203700 | IN12 (04146) | |
| Mafa-A2*0532 | EU203688 | IN04 (02367) | |
| Mafa-B alleles | |||
| Mafa-B*0302 | EU203720 | CE29 (13670) | |
| Mafa-B*0702 | EU203704 | IN12 (04146) | |
| Mafa-B*1201 | EU203690 | IN04 (02367), IN10 (04141) | Mafa-B*12 (Malaysian and Mauritian cynomolgus, AB195442) (3,4) |
| Mafa-B*1202 | EU203682 | IN02 (02326) | |
| Mafa-B*3302 | EU046324 | CE16 (13655), CE19 (13659) | |
| Mafa-B*4403 | EU203715 | CE19 (13659) | |
| Mafa-B*4501 | EU203717 | CE28 (13668) | Mafa-B*450101 (Mauritian cynomolgus, AY958143) (5) |
| Mafa-B*5002 | EU203693 | IN04 (02367) | |
| Mafa-B*5101 | EU203718 | CE28 (13668) | Mafa-B*510101 (Mauritian cynomolgus, AY958150) (5) |
| Mafa-B*5601 | EU203714 | CE16 (13655) | |
| Mafa-B*5701 | EU203719 | CE28 (13668) | |
| Mafa-B*5801 | EU203722 | CE12 (13651) | |
| Mafa-B*5802 | EU203683 | IN02 (02326) | |
| Mafa-B*5803 | EU203721 | CE29 (13670) | |
| Mafa-B*5901 | EU203723 | CE12 (13651) | |
| Mafa-B*6602 | EU203716 | CE28 (13668) | |
| Mafa-B*6701 | EU203724 | CE12 (13651) | |
| Mafa-B*6801 | EU203725 | CE12 (13651) | |
| Mafa-B*6901 | EU203726 | CE16 (13655) | |
| Mafa-B*7001 | EU203680 | IN01 (01095) | |
| Mafa-B*7101 | EU203681 | IN02 (02326) | |
| Mafa-B*7201 | EU203684 | IN02 (02326) | |
| Mafa-B*7301 | EU203701 | IN07 (04132) | |
| Mafa-B*7401 | EU203702 | IN07 (04132) | |
| Mafa-B*7501 | EU203703 | IN12 (04146) | |
| Mafa-B*7601 | EU203691 | IN04 (02367) | |
| Mafa-B*7701 | EU203692 | IN04 (02367) | |
| Mafa-B*7801 | EU203694 | IN04 (02367), CE28 (13668) | |
| Mafa-B*7901 | EU203695 | IN04 (02367) | Mamu-B*05 (Indian rhesus, U41827) (6) |
1
The references for the previously described alleles are shown in parentheses.
MHC class I cDNA sequences identified in this study were compared with other known MHC nucleotide sequences previously identified in other macaque species. Previously named alleles whose sequences are identical to the Indonesian cynomolgus macaque MHC class I cDNA sequences are shown with their accession number. The reference animal used for allele discovery is shown. References listed are: (1) (Lafont et al. 2007), (2) (Otting et al. 2007), (3) (Uda et al. 2005), (4) (Wiseman et al. 2007), (5) (Krebs et al. 2005), (6) (Boyson et al. 1996).