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. Author manuscript; available in PMC: 2015 Oct 19.
Published in final edited form as: Genom Data. 2015 Mar 1;3:61–62. doi: 10.1016/j.gdata.2014.11.006
Organism/cell line/tissue Mus musculus
Sex N/A
Sequencer or array type NGS: Illumina HiSeq2000
Microarray: Illumina MouseRef-8
Data format NGS: raw data in SRA files
Microarray: raw data in TXT files
Experimental factors NGS: mouse oral squamous cell carcinoma cell lines
Microarray: mouse oral squamous cell carcinoma cell lines, metastatic lymph node, control primary C57BL/6 splenocytes
Experimental features 1. NGS to determine mutational landscape of mouse oral cancer lines
2. Microarray to determine transcriptional landscape of mouse oral cancer lines
3. Comparative analysis of genomic and transcriptional data between aggressive and indolent mouse oral cancer lines
4. Comparative analysis between mouse model and published human sequencing and microarray data
Consent N/A
Sample source location Saint Louis, MO United States