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. Author manuscript; available in PMC: 2015 May 18.
Published in final edited form as: Clin Transl Sci. 2009 Oct;2(5):355–360. doi: 10.1111/j.1752-8062.2009.00148.x

Table 1.

Primers and PCR conditions.

Transcript and primers PCR conditions
Specific first exon forward primers
NESP55 (Accession no. NMJH6592)
Round 1 5′-GAAGAGTCGAAGGAGCCCAAG-3′ 95°C × 6 minutes; 95°C × 30 seconds, 57°C × 30 seconds, 72°C
Round 2 5′-GTCACTAATGGAGGACGCCGT-3′ × 1 minute 45 seconds × 35 cycles; 72°C × 10 minutes
XLαs (Accession no. NM_001077490)
Round 1 5′-GGATGCCTCCGCTGGTTTCAGCATCG-3′ 95°C × 6 minutes; 95°C × 30 seconds, 57°C × 30 seconds, 72°C
Round 2 5′-CTTTCTCGTGCAAGCCTTC-3′ × 1 minute 45 seconds × 35 cycles; 72°C × 10 minutes
Gas (Accession no. NM_000516)
Round 1 5′-ATGGGCTGCCTCGGGAACAGT-3′ 95°C × 3 minutes; 94°C × 30 seconds, 66°C × 2 minutes, × 39 cycles; 68°C × 5 minutes
Common downstream reverse primers Product size (bp)
Exon 6 NESP55 XLαs s
Round 1 5′-TTCGTAGCAGGCACGCACTCC-3′ 482 616 451
Round 2 5′-GCCTTGGCATGCTCATAGA-3′ 329 517 416
Exon 8
Round 1 5′-GTCCACCTGGAACTTGGTCTC-3′ 635 769 604
Round 2 5′-CCAGAAGTCAGGACACGGCAG-3′ 489 677 576
Exon 13
Round 1 5′-AGAGCAGCTCGTACTGACGAAG-3′ 1,172 1,306 1,141
Round 2 5′-GCGCTGAATGATGTCACGGC-3′ 1,027 1,215 1,115