Table 1.
PDB | Ligands/Variants | Resolution | Species | Reference |
---|---|---|---|---|
1HI0 | 5′-dTdTdTdCdC-3′, GTP, Mg2+, Mn2+ (Initiation Complex) | 3.0 Å | Φ6 | A |
1HHS | Mn2+ | 2.0 Å | Φ6 | A |
1HHT | 5′-dTdTdTdCdC-3′, Mn2+ | 2.9 Å | Φ6 | A |
1HI8 | Mg2+ | 2.5 Å | Φ6 | A |
1HI1 | ATP | 3.0 Å | Φ6 | A |
1UVI | 5′-UUUUCC-3′, Mn2+ | 2.15 Å | Φ6 | B |
1UVJ | 5′-UUCC-3′, Mn2+ | 1.9 Å | Φ6 | B |
1UVK | 5′-GG-3′, Mn2+, Mg2+, pyrophosphate (product state) | 2.45 Å | Φ6 | B |
1UVL | 5′-UUUCC-3′, Mn2+ | 2.0 Å | Φ6 | B |
1UVM | 5′-UUUCC-3′, Mn2+ (alternate conformation) | 2.0 Å | Φ6 | B |
1UVN | 5′-UUCC-3′, GTP, Mn2+, Ca2+ | 3.0 Å | Φ6 | B |
1WAC | 629-QYKW-632/629-SGT-631 mutant | 3.0 Å | Φ6 | C |
2JL9 | E491Q mutant | 3.2 Å | Φ6 | D |
2JLF | E491Q mutant, 5′-UUUUCC-3′, Mn2+ | 3.2 Å | Φ6 | D |
2JLG | E491Q mutant, 5′-dTdTdTdTdCdC-3′, GTP, Mn2+ | 2.8 Å | Φ6 | D |
4A8F | 5′-dAdGdCdG-3′, Mg2+, ATP | 3.3 Å | Φ6 | E |
4A8K | 5′-dAdAdTdC-3′, Mg2+, GTP | 3.5 Å | Φ6 | E |
4A8M | 5′-dAdAdTdC-3′, Mg2+, ATP, GTP | 2.92 Å | Φ6 | E |
4A8O | E634Q mutant, Mn2+ | 2.67 Å | Φ6 | E |
4A8Q | E634Q mutant, 5′-dTdTdCdGdCdG-3′, Mg2+, ATP | 3.06 Å | Φ6 | E |
4A8S | E634Q mutant, 5′-dTdTdTdTdCdGdCdGdTdAdGdCdG-3′, Mg2+, ATP | 2.9 Å | Φ6 | E |
4A8W | E634Q mutant, 5′-dTdTdCdGdCdGdTdAdAdGdCdG-3′, Mg2+, ATP | 3.04 Å | Φ6 | E |
4A8Y | E634Q mutant, 5′-dTdTdTdTdCdGdCdGdTdAdAdGdCdG-3′, Mg2+, ATP | 3.41 Å | Φ6 | E |
4B02 | Nicked at R607, Mn2+ | 3.3 Å | Φ6 | F |
4IEG | Mg2+ (Form A) | 2.1 Å | Φ12 | G |
4GZK | Mg2+ (Form B) | 1.69 Å | Φ12 | G |
A (Butcher et al., 2001), B (Salgado et al., 2004), C (Laurila et al., 2005), D (Poranen et al., 2008c), E (Wright et al., 2012), F (Sarin et al., 2012), G (Ren et al., 2013)