Skip to main content
. Author manuscript; available in PMC: 2017 Aug 30.
Published in final edited form as: Biol Res Nurs. 2016 Mar 8;18(4):370–385. doi: 10.1177/1099800416629209

Table 4.

Summary of Transcript Origin Analysis results for differentially perturbed gene sets

KEGG
Down		 KEGG
2d		 GO
Down		 GO
2d		 BioCarta
Down		 BioCarta
2d
SPS 22 94 249 2685 1 67
SPS with E.C. Genes 22 94 249 2685 1 67
SPS with TOA signal 22 72 230 2201 1 45
    Monocytes 15 13 84 1081 0 16
    Dendritic cells 14 23 80 617 0 13
    NK cells 5 13 32 226 1 10
    B-cells 2 3 31 213 0 4
    CD4+ T-cells 0 0 3 33 0 0

Abbreviation: E.C. Genes = Essential contributing genes: Genes with substantial or above-background expression changes in the set; GO = Gene Ontogeny; KEGG = Kyoto Encyclopedia of Genes and Genomes; NK = natural killer; SPS = Significantly perturbed sets; TOA = Transcript origin analysis; 2d = Simultaneous two dimensional perturbation (up and down).