Table 2.

TCE vs Control annotated immune gene expression

Symbol	REFSEQ_ID	FC	P value	adj. P value	q-Value	PcG	Other TF with PcG
Cytokines
Ifit2	NM_008332.2	−2.91422	6.49E–06	0.008901	0.007645	None	Cdx1, Myod1
Tnf	NM_013693.1	−2.43709	3.44E–05	0.015926	0.01368	None	None
Ifitm3	NM_025378.2	−2.04188	0.000198	0.031075	0.026692	None	Stat5a
Amica1	NM_001005421.3	−2.01204	0.000128	0.025726	0.022097	None	None
Ifi202b	NM_008327.1	−2.00414	1.99E–06	0.005447	0.004679	None	None
Il4	NM_021283.1	−1.98215	0.00038	0.041971	0.03605	None	Nfatc2
Ifitm1	NM_026820.2	−1.86847	0.00039	0.04252	0.036523	None	None
Irf7	NM_016850.2	−1.84292	0.000657	0.054756	0.047032	None	None
Isg20	NM_020583.4	−1.75296	1.48E–05	0.011839	0.010169	None	Foxa2
Il17a	NM_010552.3	−1.68794	0.000793	0.060267	0.051766	None	Bhlhe40
Lif	NM_001039537.1	−1.50454	1.05E–05	0.01061	0.009113	None	Pax6
Il16	NM_010551	1.305869	6.96E–07	0.00394	0.003384	None	Foxa2, ATOH1
Tnfrsf26	NM_175649.5	1.346837	0.00032	0.038826	0.03335	None	Cdx1
Ing4	NM_133345.2	1.366442	0.000634	0.054238	0.046587	None	Rxra, Sox3
Traf1	NM_009421.3	1.401221	0.000837	0.062156	0.053389	None	Bhlhe40, Myod1
Ncf4	NM_008677.1	1.405497	8.09E–05	0.021965	0.018867	None	Ebf1, Myod1, Bhlhe40
Il1r2	NM_010555.4	1.459921	0.00052	0.049157	0.042223	None	Foxa2
Chemokines
Cxcl10	NM_021274.1	−1.76465	0.000219	0.032733	0.028116	None	None
Ccrl2	NM_017466.4	−1.66005	1.25E–05	0.010725	0.009212	None	None
Cxcr4	NM_009911.2	1.634843	0.000334	0.020502	0.016849	Suz12,Jarid2, Mtf2	ATOH1
Transcription factors & enzymes
Mycbp2	NM_207215.2	−1.64382	0.000189	0.030347	0.026066	Mtf2	Meis1, Bhlhe40, Ebf1
Trafd1	NM_172275.1	−1.58643	7.10E–05	0.021467	0.018439	None	Foxa2, Nkx2-5
Sp100	NM_013673.2	−1.31215	0.000377	0.041921	0.036008	None	Bhlhe40, Cdx1
Cxxc1	NM_028868.3	1.321214	7.64E–05	0.021965	0.018867	None	Bhlhe40
Csk	NM_007783.2	1.344270	0.0003704	0.041861	0.035956	None	Ebf1, ATOH1
Mapk11	NM_011161.4	1.341871	0.000238	0.034005	0.029208	None	Egr2, Sox3
Rap1gap	NM_001081155.1	1.344891	0.000792	0.060267	0.051766	Mtf2	Bhlhe40
Elk3	NM_205536.1	1.3791	1.47E–05	0.011839	0.010169	None	Ebf1, Stat5a
Nfkbib	NM_010908.3	1.410298	0.000119	0.025478	0.021884	None	Foxa2
Rag1ap1	NM_009057.2	1.42048	0.000158	0.027165	0.023333	None	Ebf1
Mt1	NM_013602.2	2.12539	7.29E–06	0.009447	0.008114	None	None
Cell cycle
Gadd45g	NM_011817.1	−1.30109	7.79E–05	0.021965	0.018867	Suz12, Mtf2	ATOH1
Cdc23	NM_178347	1.340161	5.13E–06	0.0083	0.007129	None	Foxa2
Apoptosis
Daxx	NM_007829.3	−1.79108	3.82E–05	0.016024	0.013764	None	None
Fas1	NM_010177.3	−1.45356	0.000115	0.025294	0.021726	None	Cdx1
Bcl11b	NM_021399.2	1.311508	0.000262	0.035376	0.030386	EZH2, Suz12, Jarid2, Mtf2
Pdcd2	NM_008799.2	1.356754	3.22E–06	0.006902	0.005928	None	Bhlhe40, Meis1
Pdcd4	NM_011050.3	1.407455	0.000546	0.05012	0.04305	None	Foxa2, Myod1
Integrins
Sdc3	NM_011520.3	−1.84389	0.000208	0.031629	0.027168	None	Hoxc9, Sox3
Ly6c1	NM_010741.2	−1.50191	0.000146	0.026013	0.022343	None	Cdx1, Bhlhe40
Cd247	NM_031162.1	1.300788	0.000203	0.031216	0.026812	None	Foxa2, Creg1, Tal1
Leng9	NM_175529.3	1.303316	0.000444	0.045017	0.038667	Mtf2	None
Mic2l1	NM_138309.1	1.33617	9.20E–05	0.022878	0.019651	None	Stat5a
Hist1h2ai	NM_178182.1	1.419197	0.000898	0.063308	0.054378	None	None
Hist1h1c	NM_015786.1	1.592885	0.000622	0.054158	0.046519	None	Cdx1, Bhlhe40
Ctla4	NM_009843.3	1.472701	0.000221	0.03284	0.028208	None	None
Miscellaneous
Birc2	NM_007465.1	1.372856	1.75E–05	0.012794	0.010989	None	Rxra, Cdx1
Ddb2	NM_028119.4	1.37404	1.22E–05	0.010725	0.009212	None	Cdx1, Rxra, Tal1
Rfx1	NM_009055.2	1.519909	0.000101	0.023946	0.020568	None	Myod1