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. Author manuscript; available in PMC: 2018 Apr 13.
Published in final edited form as: J Vis Exp. 2018 Mar 5;(133):10.3791/57413. doi: 10.3791/57413

Table 1. Calculating percent repair using CT values generated from SSPE-qPCR.

(A) Repair of a DPC-containing substrate transfected in V79 Chinese hamster lung fibroblasts 3 and 8 h post-transfection. (B) SSPE-qPCR of 0 h samples not transfected into cells. In one sample the efficiency of the crosslinking reaction between DNA and oxoguanine glycosylase was high (this sample yielded a low delta CT value) while in the other sample the efficiency of protein crosslinking was low (this sample yielded a relatively high delta CT value). See text of Representative Results for details.

A
Time − Primer extension + Primer extension Δ CT Percent Repair (2ΔCT/23× 100)
3 h 23.5 21.1 2.4 66
8 h 29.4 26.5 2.9 93
B
Time − Primer extension + Primer extension Δ CT Percent Background (2ΔCT/23× 100)
0 h 15.4 14.6 0.8 22
0 15.4 12.9 2.5 71