Table 3.
Assembly metrics of the four merged assemblies.
| PICR | PIRC | IPCR | IPRC | |
|---|---|---|---|---|
|
| ||||
| Scaffolds [#] | 1,829 | 1,825 | 2,317 | 2,304 |
| Length [Gb] | 2.37 | 2.37 | 2.36 | 2.36 |
| Min length [bp] | 568 | 568 | 915 | 915 |
| Max length [Mb] | 80.58 | 80.58 | 66.35 | 66.35 |
| Mean length [kb] | 1,295.21 | 1,298.43 | 1,019.33 | 1,024.64 |
| Median length [bp] | 37,019 | 38,181 | 13,201 | 14,241 |
| N50 length [kb] | 20,188.72 | 19,582.71 | 21,744.88 | 21,262.79 |
| N50 [#] | 32 | 33 | 33 | 34 |
| N90 length [kb] | 4,400.57 | 4,422.38 | 3,545.61 | 3,650.27 |
| N90 [#] | 121 | 122 | 122 | 122 |
| Total N gaps [#] | 3,237 | 3,250 | 72,528 | 72,536 |
| Total Ns [%] | 0.12 | 0.12 | 1.13 | 1.13 |