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. Author manuscript; available in PMC: 2018 Jul 23.
Published in final edited form as: Biotechnol Bioeng. 2018 May 29;115(8):2087–2100. doi: 10.1002/bit.26722

Table 3.

Assembly metrics of the four merged assemblies.

PICR PIRC IPCR IPRC

Scaffolds [#] 1,829 1,825 2,317 2,304
Length [Gb] 2.37 2.37 2.36 2.36
Min length [bp] 568 568 915 915
Max length [Mb] 80.58 80.58 66.35 66.35
Mean length [kb] 1,295.21 1,298.43 1,019.33 1,024.64
Median length [bp] 37,019 38,181 13,201 14,241
N50 length [kb] 20,188.72 19,582.71 21,744.88 21,262.79
N50 [#] 32 33 33 34
N90 length [kb] 4,400.57 4,422.38 3,545.61 3,650.27
N90 [#] 121 122 122 122
Total N gaps [#] 3,237 3,250 72,528 72,536
Total Ns [%] 0.12 0.12 1.13 1.13