Table 1.
Strain ID | Source | Year | Array Serotype | ST | Associated Serotypesb |
---|---|---|---|---|---|
1620 | IPD | 1990 | 9N | 66 | 9N, 19F, 14 |
1614 | IPD | 1994 | 18C | 113 | 18C |
1613 | IPD | 1994 | 7F | 191 | 7F |
1610 | IPD | 1994 | 4 | 247 | 4 |
1611 | IPD | 1994 | 4 | 247 | 4 |
1616 | IPD | 1995 | 14 | 124 | 14 |
1615 | IPD | 1995 | 7F | 191 | 7F |
1612 | IPD | 1995 | 5 | 3035 | 5 |
1617 | IPD | 1995 | NT (non-pneumoniae): 16A-like but wzg, wzh, wzd, wze, wchA, rmlD absent or divergent |
Failed | NA |
1618 | IPD | 1998 | NT: only glf present | 1054 | NT |
1619 | IPD | 1999 | 14 | 124 | 14 |
1626 | IPD | 2002 | 19A (92%) + 37 (8%) | 199 | 19A and others |
1636 | IPD | 2002 | NT: only rmlB, rmlD, rmlA, rmlC present | 227 | 1 |
1635 | IPD | 2003 | 7F | 191 | 7F |
1625 | IPD | 2003 | 37 | 447 | 37, 11 |
1622 | IPD | 2003 | NT: 22A-like but wcwC and wcwA absent or divergent | 1294 | 22F |
1627 | IPD | 2003 | 33A/F | 1367 | 33F |
1623 | IPD | 2003 | 16F | 1840 | 16F |
1628 | IPD | 2004 | 1 | 227 | 1 |
1621 | IPD | 2004 | NT: only rmlB, rmlD, rmlA, rmlC present | 227 | 1 |
1629 | IPD | 2004 | NT: only rmlB, rmlD, rmlA, rmlC present | 227 | 1 |
1633 | IPD | 2004 | 8 | 1480 | 8 |
1631 | IPD | 2005 | 8 | 1480 | 8 |
1632 | IPD | 2005 | NT: 16F-like but wzg gene absent or divergent | 1840 | 16F |
1624 | IPD | 2006 | 7F | 191 | 7F |
1634 | IPD | 2006 | 7F | 218 | 12F |
1630 | IPD | 2006 | NT: only rmlB, rmlD, rmlA, rmlC present | 227 | 1 |
1637 | IPD | 2007 | 33A/F | 100 | 33F |
2566-06 | NP | 2006 | NT: only glf present | 448 | NT |
2537-06 | NP | 2006 | 35F | 487 | 35F |
2489-06 | NP | 2006 | NT: no cps genes detected | 2011 | NT |
2563-06 | NP | 2006 | 35A | 4505 | None |
0900-07 | NP | 2007 | NT: only glf present | 344 | NT |
2009-07 | NP | 2007 | 34 | 547 | 34 |
1944-07 | NP | 2007 | 6C | 3101 | 6A |
1878-08 | NP | 2008 | NT: only glf present | 1054 | NT |
1927-08 | NP | 2008 | 35A | 3026 | 35A |
Abbreviations: IPD, invasive pneumococcal disease; NA, not available; NP, nasopharyngeal.
Sorted by source, year of isolation, and ST.
Per Multilocus Sequence Typing online database.