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. Author manuscript; available in PMC: 2023 Mar 21.
Published in final edited form as: Cell. 2022 Nov 10;185(24):4560–4573.e19. doi: 10.1016/j.cell.2022.10.018

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-DYKDDDDK tag antibody (mouse monoclonal, clone 1E6) FujiFilm Wako Pure Chemicals Cat# 012–22384; RRID: AB_10659717
Goat anti-mouse IgG secondary antibody, conjugated with Alexa Fluor 488 Thermo Fisher Scientific Cat# A32723; RRID: AB_2633275
Goat anti-mouse IgG secondary antibody, conjugated with Alexa Fluor 647 Thermo Fisher Scientific Cat# A21235; RRID: AB_2535804
Anti-β-Arrestin1 antibody (rabbit monoclonal, clone D8O3J) Cell Signaling Technology Cat# 12697; RRID: AB_2797996
Anti-β-Arrestin2 antibody (rabbit monoclonal, clone C16D9) Cell Signaling Technology Cat# 3857; RRID: AB_2258681
anti-α-tubulin antibody (mouse monoclonal, clone DM1A) Santa Cruz Biotechnologies Cat# sc-32293; RRID: AB_628412
Anti-Rabbit IgG, conjugated with horseradish peroxidase GE Healthcare Cat# NA9340; RRID: AB_772191
Anti-Mouse IgG, conjugated with horseradish peroxidase GE Healthcare Cat# NA9310; RRID: AB_772193
Bacterial and virus strains
SCS1 Supercompetent Cells Agilent Technologies Cat# 200231
E. coli NiCo21(DE3) NEB Cat# C2529H
E. coli Rosetta (DE3) Millipore Sigma Cat# 70954–3
Biological samples
Biological samples
Fetal bovine serum Thermo Fisher Scientific Cat# 10270–106
Goat serum Nippon Bio-test Laboratories Cat# 0208–01
Chemicals, peptides, and recombinant proteins
Polyethylenimine (PEI) Max (MW 40,000) Polysciences Cat# 24765–1
Opti-MEM Thermo Fisher Scientific Cat# 31985–070
2-[4-(2-hydroxyethyl)piperazin-1-yl]ethanesulfonic acid (HEPES) Sigma-Aldrich Cat# H3375
Ethylenediaminetetraacetic acid (EDTA) solution Thermo Fisher Scientific Cat# 15575–020
Trypsin Thermo Fisher Scientific Cat# 27250–018
Bovine serum albumin SERVA Electrophoresis Cat# 11945
Coelenterazine Carbosynth Cat# EC14031
Angiotensin II Peptide Institute Cat# 4001-v
Bradykinin Peptide Institute Cat# 4002-v
(D-Ala2,N-Me-Phe4,glycinol5)-Enkephalin (DAMGO) Bachem AG Cat# 4007829
Dopamine FUJIFILM Wako Pure Chemical Cat# 040–15433
Dynorphin A Peptide Institute Cat# 4080-v
Endothelin-1 Peptide Institute Cat# 4198-s
Isoproterenol Tokyo Chemical Industry Cat# I0260
Isoproterenol Sigma-Aldrich Cat# I6504
Methionine-Enkephalin Peptide Institute Cat# 4042-v
Neurotensin Peptide Institute Cat# 4029
Norepinephrine Tokyo Chemical Industry Cat# A0906
Oxytocin Peptide Institute Cat# 4084-v
PAR2 peptide Peptide Institute Cat# PAR-3664-PI
Parathyroid Hormone (PTH) Peptide Institute Cat# 4068-s
Serotonin FUJIFILM Wako Pure Chemical Cat# 321–42341
Sphingosine 1-phosphate Cayman Chemical Cat# 62570
Substance P Peptide Institute Cat# 4014-v
Thyrotropin-releasing hormone (TRH) Peptide Institute Cat# 4011
[Arg8]-vasopressin (AVP) Peptide Institute Cat# 4085-v
DMEM Nissui Cat# 05919
Penicillin G Sigma-Aldrich Cat# P3032
Streptomycin Thermo Fisher Scientific Cat# 11860–038
ImmunoStar Zeta FUJIFILM Wako Pure Chemical Cat# 291–72401
3-isobutyl-1-methylxanthine (IBMX) Sigma-Aldrich Cat# I5879
Forskolin (Fsk) Sigma-Aldrich Cat# F6886
V2Rpp (ARGRpTPPpSLGPQDEpSCpTpTApSpSpSLAKDTSS) Tufts University Core Facility N/A
Monobromobimane (mBBr) Thermo Fisher Scientific Cat# M1378
IANBD Amide (N,N’-Dimethyl-N-(Iodoacetyl)-N’-(7-Nitrobenz-2-Oxa-1,3-Diazol-4-yl)Ethylenediamine) Thermo Fisher Scientific Cat# D2004
L-Cysteine Sigma-Aldrich Cat# 30089
5,5-dithio-bis-(2-nitrobenzoic acid) (DTNB) Thermo Fisher Scientific Cat# 22582
BODIPY-TMR PI(4,5)P2 Echelon Biosciences Cat # C-45M6
FLAG peptide (DYKDDDDK) Stanford Pan Facility N/A
AlexaFluor 488 C5 maleimide Thermo Fisher Scientific Cat# A10254
ATTO647N C2 maleimide ATTO TEC Cat# AD647N-41
Lauryl maltose neopentyl glycol (LMNG) Anatrace Cat# NG310
Cholesteryl Hemisuccinate (CHS) Steraloids Cat# C6823
Benzamidine hydrochloride hydrate Sigma-Aldrich Cat# B6506
Leupeptin Sigma-Aldrich Cat# 50-568-49
Tris(2-carboxyethyl)phosphine hydrochloride (TCEP) solution Sigma-Aldrich Cat# 646547
ESF921 culture medium Expression Systems Cat# 96–001
Ethylenediaminetetraacetic acid (EDTA) Sigma-Aldrich Cat# E5134
2-Mercaptoethanol (BME) Sigma-Aldrich Cat# M6250
HBS-P+ Buffer 10x Cytiva Cat# BR100671
08:0 PI(4,5)P2 Avanti Polar Lipids Cat# 850185
08:0 PI(3,4)P2 Avanti Polar Lipids Cat# 850183
08:0 PI(3,5)P2 Avanti Polar Lipids Cat# 850184
08:0 PI(3,4,5)P3 Avanti Polar Lipids Cat# 850186
08:0 PI(3)P Avanti Polar Lipids Cat# 850187
08:0 PI(4)P Avanti Polar Lipids Cat# 850182
08:0 PG Avanti Polar Lipids Cat# 840433
Adenosine triphosphate (ATP) Sigma-Aldrich Cat# A7699
Isopropyl β-D-1-thiogalactopyranoside (IPTG) Sigma-Aldrich Cat# I6758
Neurotensin fragment 8–13 acetate salt Sigma-Aldrich Cat# N5266
Series S Sensor Chip SA Cytiva Cat# BR100531
Imidazole Sigma-Aldrich Cat# I2399
Ampicilin Sigma-Aldrich Cat# A9393
Sodium cholate Sigma-Aldrich Cat# C6445
HRV3C protease EMD Millipore Cat# 71493
Critical commercial assays
PrimeSTAR HS DNA Polymerase Takara Bio Cat# R010B
NEBuilder HiFi DNA Assembly Master Mix New England BioLabs Cat# E2621X
NucleoBond Xtra Midi Plus Macherey-Nagel Cat# 740412.50
PureYield Plasmid Miniprep System Promega Cat# A1222
FastGene Plasmid Mini Kit Nippon Genetics Cat# FG-90502
MycoAlert Mycoplasma Detection Kit Lonza Cat# LT07–118
Green Up cADDis cAMP Assay Kit Montana Molecular Cat# U0200G
BirA500 biotin-protein ligase standard reaction kit Avidity Cat #1
Deposited data
All experimental data This paper; Mendeley Data https://dx.doi.org/10.17632/ynrr4j7t4s.1
Active-state crystal structure of β-arrestin 1 bound to the phosphorylated V2R C-tail and Fab30 Shukla et al., 2013 PDB: 4JQI
Inactive-state crystal structure of β-arrestin 1 Han et al., 2001 PDB: 1G4M
neurotensin receptor and arrestin2 complex Huang et al., 2020 PDB: 6UP7
Experimental models: Cell lines
Human: HEK293A cells Thermo Fisher Scientific Cat# R70507
Human: ΔβArr1/2 DKO HEK293 cells O’Hayre et al., 2017 Clones 1 and 2
Insect: Spodoptera frugiperda Sf9 cells Expression Systems Cat# 94–001
Insect: Trichuplusia ni Hi5 cells Expression Systems Cat# 94–002
Recombinant DNA
pFastBac-NTSR1 Huang et al., 2020 N/A
pVL-GRK5 Huang et al., 2020 N/A
pFB Dual Fab30 This study N/A
pET15b-β-arrestin-1 Huang et al., 2020 N/A
pET15b-β-arrestin-1 (ΔCT) Huang et al., 2020 N/A
pET15b-β-arrestin-1 (3Q) This study N/A
pET15b-β-arrestin-1 (3Q) (ΔCT) This study N/A
pET15b-β-arrestin-1 A12C V387C This study N/A
pET15b-β-arrestin-1 A12C V387C (3Q) This study N/A
pET15b-β-arrestin-1 L68C Latorraca et al., 2020 N/A
pET15b-β-arrestin-1 L68C (3Q) This study N/A
pET15b-β-arrestin-1 L167W L293C Latorraca et al., 2020 N/A
pET15b-β-arrestin-1 L167W L293C (3Q) This study N/A
Plasmids for NanoBiT experiments See Table S4 (Xu et al., 2022; Hisano et al., 2019; Huang et al., 2020; Shihoya et al., 2018; Baidya et al., 2020; Inoue et al., 2012; Kato et al., 2019; Kawakami et al., 2022) N/A
β-arrestin-2-mApple Eichel et al., 2016 N/A
β-arrestin-2(3Q)-mApple This study N/A
mApple-N1 Shaner et al., 2008 Addgene #54567
Software and algorithms
GraphPad Prism, Version 8.0, 9.0 GraphPad, Inc. https://www.graphpad.com/
Soft Max Pro, Version 7 Molecular Devices https://www.moleculardevices.com/products/microplatereaders#softmaxproLink
FlowJo software, Version 10 FlowJo https://www.flowjo.com/solutions/flowjo
PyMOL Schrö dinger, Inc. https://pymol.org/2/
FluorEssence Version 3.8 Horiba, Inc. https://www.horiba.com
Fiji (ImageJ2) Version 2.3.0 N/A https://imagej.net/software/fiji/
R studio Version 1.3.1093 N/A https://www.rstudio.com/products/rstudio/
R Version 4.0.3 The R Foundation for Statistical Computing
drc package (in R) Version 3.0–1 Ritz et al., 2015 N/A
Biacore Control and Analysis Software Version 2.0.4 Cytiva N/A
MagicPlot Version 3.0 MagicPlot Systems LLC https://magicplot.com/
Other
96 well white plates Greiner Bio-one Cat# 655083
384 well black Corning Cat# 3575
96 well ½ area white PerkinElmer Cat# 6005560
96-well V-bottom plate Greiner Bio-one Cat# 651201
96-well plate, black Corning Cat# 3340
Luminescence microplate reader Molecular Devices SpectraMax L, 2PMT
Flow cytometer Sony EC800
Chemiluminescent imager Cytiva Amersham Imager 680
BioTek Multi plate reader BioTek BioTek Synergy H4
Tecan multimodal microplate reader Tecan Infinite M1000 PRO
SPR Cytiva Biacore T100