Abstract
Elemental selenium (Se0) nanomaterials undergo allotropic transition from thermodynamically‐unstable to more stable phases. This process is significantly different when Se0 nanoparticles (NPs) are produced via physico‐chemical and biological pathways. While the allotropic transition of physico‐chemically synthesized Se0 is fast (minutes to hours), the biogenic Se0 takes months to complete. The biopolymer layer covering biogenic Se0 NPs might be the main factor controlling this retardation, but this still remains an open question. Phylogenetically‐diverse bacteria reduce selenium oxyanions to red amorphous Se0 allotrope, which has low market value. Then, red Se0 undergoes allotropic transition to trigonal (metallic grey) allotrope, the end product having important industrial applications (e.g. semiconductors, alloys). Is it not yet clear whether biogenic Se0 presents any biological function, or it is mainly a detoxification and respiratory by‐product. The better understanding of this transition would benefit the recovery of Se0 NPs from secondary resources and its targeted utilization with respect to each allotropic stage. This review article presents and critically discusses the main physico‐chemical methods and biosynthetic pathways of Se0 (bio)mineralization. In addition, the article proposes a conceptual model for the resource recovery potential of trigonal selenium nanomaterials in the context of circular economy.
The present manuscript consists of a novel review compiling an updated state of the art about the synthesis, applications, and allotropic transitions of SeNPs within the circular economy concept.

INTRODUCTION
The formation of solid, elemental selenium, Se0, via physico‐chemical and biological pathways is still a poorly understood process (Ruiz‐Fresneda et al., 2020). Se0 is a key component of the biogeochemical cycle of selenium (Se) in nature and in industrial settings (Staicu & Barton, 2021). This is particularly relevant since its solid state and poor water solubility make it non bioavailable and thus unavailable to biota. In addition, Se finds multiple uses in industry and commercial applications, therefore understanding the synthesis route leading to Se0 (nano)particles is important for its recovery from aqueous solutions as a solid product. Based on the agent controlling the synthesis of Se0, we distinguish between biogenic (resulting from the metabolic activity of a biological system) and chemogenic (produced as a results of physico‐chemical methods). While the physico‐chemical methods rely mainly on the reduction of tetravalent selenite, SeO3 2−/SeIV, the biological systems can reduce both selenite and hexavalent selenate, SeO4 2−/SeVI, oxyanions to Se0. The formation of Se0 by biological systems is considered a biomineralization process, mainly leading to an amorphous mineral phase (Staicu et al., 2022). Interestingly, elemental selenium has several different allotropes: two amorphous (red and black), three crystalline monoclinic (deep red), crystalline trigonal (or rhombohedral) selenium (metallic grey), orthorhombic selenium and three allotropes of crystalline cubic Se0 (Fernández‐Martínez & Charlet, 2009). The phase transition between these allotropes (i.e. allotropic transition) is relevant from a biological and technological perspective. Biologically, the formation of crystalline Se0 with needle‐like structures is detrimental for the cellular integrity and homeostasis (in contrast, the amorphous allotrope is regularly globular in shape). Technologically, the transition to trigonal (metallic grey) Se0 is desirable since this allotrope is a semiconductor, making it useful in photocells (trigonal Se0 is a photoconductor, which means it has the ability to change electromagnetic energy into electrical energy).
This review article presents and discusses the up‐to‐date physico‐chemical and biosynthetic (biomineralization) methods and pathways of Se0 nanomaterials synthesis and proposes a conceptual model for the resource recovery potential of Se0 in the context of circular economy.
PHYSICO‐CHEMICAL SYNTHESIS OF SE0
Nowadays, there is a huge demand for the large‐scale production of SeNPs due to their enormous usefulness in many industrial and medical applications (Ojeda et al., 2020). Physico‐chemical methods have been the most widely used so far for their fabrication. Although these procedures have several disadvantages over biosynthesis, they provide a quick and reproducible way to produce large amounts of NPs.
The chemical route is based on the use of chemical compounds that initiate the synthesis reaction under controlled conditions. The most common and simplest method employed is chemical reduction, which involves the use of reducing agents (e.g., ascorbic acid, glutathione, sulfur dioxide, glucose, cysteine, sodium dodecyl sulfate, etc.) of Se salts precursors (sodium selenite, sodium selenate, selenious acid, thiosulfuric acid, sodium selenosulfate, etc.) (Table 1). This experimental setup is fast and has therefore been used to a greater extent than physical methods. However, the process is commonly based on the use of toxic and expensive compounds. Many chemical reducing agents have been reported in the literature for the formation of SeNPs of different sizes and morphology. Ascorbic acid is one of the most employed agents due to its lower toxicity and higher biocompatibility (Gangadoo et al., 2017; Sun et al., 2009). Gangadoo et al. (2017) showed a quick and replicable methodology to synthesize amorphous nanospheres of Se using this compound. They demonstrated that the concentration of ascorbic acid affects NP size, forming smaller Se spheres (<70 nm) with increasing concentrations. Other acids are also useful as effective reducing agents. For instance, Dwivedi et al. (2011) developed a simple chemical method to produce amorphous SeNPs ranging from 35 to 70 nm based on different organic acids (acetic acid, oxalic acid, and gallic acid) reactions in aqueous medium with sodium selenosulphate as Se source. In many cases, chemical reduction is accompanied by other chemical reactions such as precipitation and acid decomposition. Panahi‐Kalamuei et al. (2015) mixed SeCl4 with CTAB (cetrimonium bromide) before reduction with different compounds (hydrazine, TGA, or borohydride) for co‐precipitation of SeNPs. A wide variety of shapes and sizes were observed with SEM (Scanning Electron Microscopy) depending on the precipitant: Se nanorods (nm scale in diameter and μm scale in length) were produced with hydrazine, spherical SeNPs (20 nm) with TGA, and big Se aggregates with borohydride. Decomposition with non‐oxidative acids (HCl, H3PO4, etc.) prior to reduction has also been employed to produce SeNPs. For example, Stroyuk et al. (2008) proposed an indirect reduction method based on the reduction of bulk Se crystals with sodium sulphite to obtain sodium selenosulfate (Na2SeSO3), which was decomposed and converted to SeNPs with HCl in aqueous solution of a surfactant or polymer.
TABLE 1.
Physico‐chemical methodologies for the synthesis of selenium nanoparticles.
| Chemical method | Reagent | Se precursor | Se product | Allotropic form and morphology | Size (nm) | Reference |
|---|---|---|---|---|---|---|
| Chemical reduction | Ascorbic acid | Selenium tetrachloride (SeCl4) | Se0 NPs | Amorphous nanospheres | <100 | Gangadoo et al. (2017) |
| Chemical reduction |
Acetic acid Oxalic acid Gallic acid |
Sodium selenosulphate (Na2SeSO3) | SeNPs | Amorphous nanospheres | 40–100 | Dwivedi et al. (2011) |
| Chemical reduction | L‐cysteine | Sodium selenite (Na2SeO3) | Se0 NPs | Amorphous nanospheres | ~100 | Li et al. (2010) |
| Chemical reduction | Glutathione (GSH) | Sodium selenite (Na2SeO3) | SeNPs | Rods |
~178 (by DLS) ~75 (by SEM) |
Verma and Maheshwari (2018) |
| Chemical reduction | Glucose | Sodium selenite (Na2SeO3) | SeNPs | Amorphous nanospheres | 280–295 | Nie et al. (2016) |
| Acidic Decomposition | HCl | Sodium selenosulfate (Na2SeSO3) | SeNPs |
Amorphous nanospheres |
25–200 | Stroyuk et al. (2008) |
| Chemical precipitation | Hydrazine | SeCl4 | SeNPs | Hexagonal microrods | ‐ | Panahi‐Kalamuei et al. (2015) |
| Chemical precipitation | TGA | SeCl4 | SeNPs | Hexagonal nanospheres | 20 | Panahi‐Kalamuei et al. (2015) |
| Physical method | Reagent | Se precursor | Se product | Structure and morphology | Size | Reference |
|---|---|---|---|---|---|---|
| Liquid laser ablation | Purified water | Polycrystalline Se | Se0 NPs | Amorphous spheres | 20–100 | Kuzmin et al. (2012) |
| Liquid laser ablation | Deionized water | Selenium pellet (99.99% purity) | SeNPs | Amorphous spheres | ~115 | Guisbiers et al. (2016) |
| Microwaves | Hydrofluoric acid | Se powder (99.99% purity) | Se0 NPs | Trigonal spheres | 30 nm‐50 μm | Ahmad (2016) |
| Microwaves | Oleic acid and diophenyl ether | Cycloocteno‐1,2,3‐selenadiazol | Se0 NPs |
Amorphous, monoclinic, and trigonal Nanospheres and plates‐like shape |
1–100 (nanospheres) 300 nm‐ 1 μm (plates) |
Jadhav and Khanna (2015) |
| Gamma radiation (25 kGy dose) | YPG broth | Sodium selenite (Na2SeO3) | Se0 NPs | Amorphous nanospheres | 100–220 | Pereira et al. (2022) |
| Gamma radiation (25 kGy dose) | Dextran | Selenium dioxide (SeO2) | Se0 NPs | Nanospheres | ~74 | Hien et al. (2018) |
| Photocatalysis (UV radiation) | TiO2 |
Sodium selenite (Na2SeO3) Sodium selenate (Na2SeO4) |
Se0 NPs | Amorphous aggregates | ‐ | Nu Hoai Nguyen et al. (2005) |
| Hydrothermal (150°C) | L‐cysteine | Selenium dioxide (SeO2) | Se0 NPs | Trigonal microrods | 600–650 | Mondal et al. (2008) |
| Hydrothermal (130°C) | Glucose and CTAB | Sodium selenite (Na2SeO3) | SeNPs | Trigonal nanorods | 200–300 | Cao et al. (2011) |
SeNPs can be also synthesized through several physical methods including ultraviolet (UV) radiation, laser ablation, gamma irradiation, microwaves, hydrothermal techniques, sonochemical methods, etc (Table 1). Although these methodologies can be dangerous, they have some advantages over chemical methods, including the absence of contaminants and toxic compounds, shorter reactions, and low‐cost equipment (Shahbazi et al., 2015). Most procedures are based on the application of physical phenomena, mainly radiation and temperature variation, to selenium sources in liquid solvents. Liquid laser ablation is being deeply explored for its advantages such as being a non‐toxic, low‐cost, and homogeneous method in comparison with conventional chemical procedures. Amorphous SeNPs of around 20–100 nm were produced with this method in water by using pulsed copper vapour laser (wavelengths 510.6 and 578.2 nm; pulse duration 15 ns; and pulse repetition rate 15 kHz) over polycrystalline Se as target (Kuzmin et al., 2012). Microwave irradiation can assist Se salts interaction with liquid solvents to synthesize SeNPs. Ahmad (2016) reported on a method for trigonal Se nanosphere production on a silicon surface by applying microwave radiation combined with high pressures (60 bar) and temperature (160°C) to selenium powder in hydrofluoric acid. Another type of radiation that could be involved in SeNP synthesis is the Gamma rays. Pereira et al. (2022) were able to produce amorphous Se nanospheres (100–220 nm) through Gamma irradiation (25 kGy dose) over sodium selenite as precursor in YPG (Yeast‐Peptone‐Galactose) broth. Although it is a promising method, the high danger of gamma rays is well known. Photocatalytic processes involve the activation of semiconductor catalysts with different light sources. Titanium dioxide (TiO2)‐based photocatalysis with UV radiation has been extensively used as an economic strategy for SeVI and SeIV reduction and production of SeNPs. Following this method, Nu Hoai Nguyen et al. (2005) showed the formation of amorphous Se0 and their transformation to crystalline Se after drying and ageing process for 2 weeks. In a recent study, Holmes et al. (2022) investigated the reduction of SeVI in a mine‐impacted wastewater, revealing the ability of photocatalytic reduction of TiO2 to selectively reduce selenate from >500 μg L−1 to <2 μg L−1. The reduction yield was unaffected by the presence of the more energetically favourable electron acceptor, nitrate (250× molar concentration of selenate) or the high concentrations of sulfate (1940× molar concentration of selenate).
Physically‐based methods are frequently combined with chemically‐based methods to improve the quality of the NPs (in terms of size, stability, crystallinity, purity, and other physico‐chemical properties). High temperatures influence the allotropic transition from unstable amorphous to trigonal crystalline Se, the most thermodynamically stable phase (Properzi et al., 2013). For this reason, hydrothermal‐based methods are being employed to increase the crystallinity of chemically‐formed SeNPs for the production of trigonal Se crystals (Chen et al., 2010; Dwivedi et al., 2011), which exhibit different properties and applications compared to amorphous Se materials, such as high photoconductivity and piezoelectricity (Lei et al., 2020; Mayers et al., 2003). Several authors have employed this methodology as an emerging tool for the synthesis of crystalline Se nanomaterials using autoclaving conditions (120–150°C) for 12–24 h on different Se sources (Cao et al., 2011; Mondal et al., 2008). Temperatures oscillating from 80 to 100°C are generally sufficient to obtain crystalline SeNPs as reported in the literature (Chen et al., 2010; Lortie et al., 1992; Stroyuk et al., 2008). However, in the recent years several processes using lower temperatures for crystallization have been proposed. Vieira et al. (2017) reported a facile synthesis way to produce trigonal crystalline SeNPs using D‐fructose as reducing agent and sodium selenite as Se source, respectively, at 45°C. Similarly, Hageman et al. (2017) employed a 50°C temperature to gradually transform red amorphous nanospheres to grey hexagonal Se crystals, providing a simpler and more economical way for large‐scale production.
These traditional methods involving the use of physico‐chemical procedures are usually costly, dangerous, and in many cases require the use of high temperatures, acidic pHs, or hazardous chemicals, which may make NPs unsafe for biomedical application (Iranifam et al., 2013). However, inorganic SeNPs are currently being investigating in the field of nanomedicine due to their low toxicity and safe purification protocols. Indeed, many examples of physico‐chemically synthesized SeNPs have been proved to trigger cellular apoptosis in tumoral cell lines (Cui et al., 2018; Geoffrion et al., 2020; Zou et al., 2019). In addition, green chemistry is gaining attention as a hybrid and safe method based on the use of environmentally benign solvents and non‐toxic reducing agents. For instance, silver NPs have been synthesized using several green solvents such as water, polyethylene glycol (PEG) and β‐D‐glucose as reducing agent (Shameli et al., 2012; Shanan Abed et al., 2019). Despite all the advances that have been made with regards to physico‐chemically methods, the biosynthesis of Se0 by non‐pathogenic microorganisms is gaining attention in the last years as an eco‐friendly, non‐toxic, and cheaper procedure to safely produce nanoparticles (Salunke et al., 2014; Wadhwani et al., 2016).
BIOLOGICAL SYNTHESIS OF SE0
Bacteria
As mentioned in the previous section, production of nanoparticles though biological procedures is one of the most promising methods today as an eco‐friendly and safe technology. The use of living organisms and their derivates (plant and bacterial extracts) to produce NPs of interest would avoid the use of hazardous and toxic chemicals, harmful radiation, high temperatures, and other technologies that are expensive and dangerous to human health. Thus, biosynthesized NPs could be safely used for biomedical applications. However, like the physico‐chemical methods, biosynthesis of nanoparticles also presents some disadvantages. For example, industrial‐scale production could be a problem with living organisms. In this regard, one of the main concerns is the longer reaction times required for biologic synthesis compared to physico‐chemical methods. An added difficulty is that the biomaterial (plant, bacteria, etc.) is often abundant in exclusive habitats and/or during certain times of the year (Ying et al., 2022). Another limitation is the quality of the nanoparticles. Biological formation of SeNPs by microorganism exhibit variation over size and shape due to the wide diversity of mechanisms and enzymes involved during the synthesis process. For instance, Oremland et al. (2004) characterized the structural and spectral features of the biogenic Se0 from three phylogenetically‐diverse Se‐respiring bacteria (Sulfurospirillum barnesii, Bacillus selenitireducens and Selenihalanaerobacter shriftii). The study observed large differences in the optical properties (UV–visible absorption and Raman spectra) of biogenic Se0 produced by the three different bacterial species. These properties also differed substantially from those of amorphous Se0 formed by chemical synthesis, probably reflecting the diversity of Se‐respiring enzymes. However, many efforts are being made to overcome these limitations and shortcomings to put biological synthesis of NPs into practical use.
A great number of studies have reported the biogenic synthesis of SeNPs mediated by different living organisms including bacteria, plant, fungi, and archaea (Table 2). From all of them, bacteria have been by far the most studied for SeNPs synthesis probably due to their ease of handling. Many bacterial species including both Gram‐negative and Gram‐positive exhibit the ability to enzymatically reduce toxic Se oxyanions, SeVI and SeIV, to non‐toxic Se0 in the form of nanoparticles with a wide variety of shapes, sizes, and structures (Eswayah et al., 2019; Fischer et al., 2020; Pinel‐Cabello et al., 2021). Most bacteria produce amorphous spherical NPs variable in size located both extracellularly and intracellularly. In the case of extracellular anaerobic respiration, Se0 particles are disposed outside the cells (Figure 1A), thus overcoming the challenge of managing such bulky products inside the cell. In other cases, such as detoxification reactions, Se0 is synthesized inside the cell (Figure 1B) most probably because the reducing agent (e.g. glutathione) is present in the cytoplasm.
TABLE 2.
Comparative analysis of the different biological procedures for the synthesis of selenium nanoparticles by living organisms.
| Living micro/macroorganisms | Taxonomic affiliation | Se precursor | Interaction mechanism | Se product | Allotropic form and morphology | Size (nm) | Location | Reference |
|---|---|---|---|---|---|---|---|---|
| Bacteria | ||||||||
| Rhodococcus aethirovorans |
Actinobacteria Gram positive |
SeIV | Reduction | Se0 NPs |
Amorphous nanospheres Nanorods |
53–97 (nanospheres) 444–555 (nanorods) |
Bacterial surface Extracellular |
Presentato et al. (2018) |
| Azospirillum brasilense |
Alphaproteobacteria Gram negative |
SeIV | Reduction | Se0 NPs | Amorphous nanospheres | 25–84 | Extracellular | Tugarova et al. (2020) |
| Azospirillum thiophilum |
Alphaproteobacteria Gram negative |
SeIV | Reduction | Se0 NPs | Amorphous nanospheres | 50–90 | Extracellular | Tugarova et al. (2018) |
| Bacillus subtilis |
Bacilli Gram positive |
SeIV | Reduction | Se0 NPs | Amorphous nanospheres | 135–165 | Extracellular | Zhu et al. (2021) |
| Bacillus cereus |
Bacilli Gram positive |
SeVI SeIV |
Reduction Volatilization |
Se0 NPs DMDSe DMDSes |
Amorphous nanospheres Trigonal nanorods |
50–150 |
Intracellular Extracellular |
Che et al. (2019) |
| Herbaspirillum sp. |
Betaproteobacteria Gram negative |
SeVI |
Reduction Volatilization |
Se0 NPs |
Amorphous nanospheres Se flowers |
≥ 200 |
Cellular surface Extracellular |
Xu et al. (2020) |
| Thauera selenatis |
Betaproteobacteria Gram negative |
SeVI SeIV |
Reduction | Se0 NPs | Nanospheres | ~150 |
Intracellular Extracellular |
Butler et al. (2012) |
| Spirullina platensis |
Cyanobacteria |
SeIV | Reduction | Se0 NPs |
Amorphous nanospheres Monoclinic and trigonal structures |
70–80 | Extracellular | Zhang et al. (2020) |
| Geobacter sulfurreducens |
Deltaproteobacteria Gram negative |
SeIV |
Reduction Volatilization |
Se0 NPs Se−II |
Amorphous nanospheres | 100–250 |
Intracellular Bacterial surface Extracellular |
Pearce et al. (2009) |
| Stenotrophomonas bentonitica |
Gammaproteobacteria Gram negative |
SeVI SeIV |
Reduction Volatilization |
Se0 NPs DMDSe DMSeS |
Amorphous nanospheres Trigonal and monoclinic nanorods |
50–200 |
Intracellular Extracellular |
Ruiz‐Fresneda et al. (2018, 2019, 2020) |
| Stenotrophomonas maltophilia |
Gammaprotebacteria Gram negative |
SeVI SeIV |
Reduction Volatilization |
Se0 NPs Se−II |
Amorphous nanospheres Crystalline nanorods |
118 ± 36 (nanospheres) 324 ± 89 (nanorods) |
Intracellular Extracellular |
Piacenza et al. (2018) |
| Acinetobacter sp. |
Gammaproteobacteria Gram negative |
SeIV | Reduction | Se0 NPs |
Amorphous nanospheres Crystalline nanorods |
≥ 100 | Extracellular | Wadhwani et al. (2017) |
| Pseudomonas putida |
Gammaproteobacteria Gram negative |
SeIV |
Reduction | Se0 NPs | Amorphous nanospheres | 100–500 |
Bacterial surface Extracellular |
Avendaño et al. (2016) |
| Escherichia coli |
Gammaproteobacteria Gram negative |
SeVI SeIV |
Reduction | Se0 NPs | Amorphous nanospheres | 100–220 |
Cellular surface Extracellular |
Kora and Rastogi(2017) |
| Fungi | ||||||||
| Trichoderma atroviride |
Fungi Sordariomycetes |
SeIV | Reduction | Se0 NPs | Crystalline nanospheres | 60–123 | Intracellular |
Joshi et al. (2019) |
| Alternaria alternata |
Fungi Dothideomycetes |
SeIV | Reduction | Se0 NPs | Amorphous nanospheres | 30–150 | Extracellular | Shoeibi et al. (2017) |
| Aspergillus terreus |
Fungi Trichomaceae |
SeIV | Reduction | Se0 NPs | Amorphous nanospheres | ≥ 100 | Extracellular |
Shoeibi et al. (2017) |
| Saccharomyces cerevisiae |
Fungi Saccharomycetes |
SeIV | Reduction | Se0 NPs | Crystalline (nanocomposite) | 30–150 | Intracellular |
Shoeibi et al. (2017) |
| Archaea | ||||||||
| Halococcus salidofinae BK8 | Haloarchaeae | SeIV | Reduction | Se0 NPs |
Nanospheres Nanorods with hexagonal phase |
~ 9 (nanospheres) ~129 (nanorods) |
Intracellular Extracellular |
Srivastava et al. (2014) |
| Haloferax alexandrines | Haloarchaeae | SeIV | Reduction | Se0 NPs | Pentagonal nanoparticles with hexagonal structure | 15 diagonal length |
Intracellular Extracellular |
Alvares and Furtado (2022) |
| Halorubrum xinjiangense | Halobacterium | SeIV | Reduction | Se0 NPs | Amorphous nanospheres | ‐ |
Intracellular Extracellular |
Güven et al. (2013) |
| Halogeometricum sp. | Halobacterium | SeIV | Reduction | Se0 NPs | Hexagonal nanospheres | ~30 | Extracellular | Abdollahnia et al. (2020) |
| Plants | ||||||||
|
Saussurea costus (roots extract) |
Magnoliopsida | SeIV | Reduction | Se0 NPs | Spherical nanospheres | 3–9 | Extracellular | Al‐Saggaf et al. (2020) |
| Vitis vinifera (dried extract of raisin) | Magnoliopsida | H2SeO3 | Reduction | Se0 NPs | Amorphous nanospheres | 3–18 | Extracellular | Husen and Siddiqi (2014) |
|
Therminalia arjuna (leaf extract) |
Magnoliopsida | SeIV | Reduction | Se0 NPs | Crystalline nanospheres | 10–80 | Extracellular | Prasad and Selvaraj (2014) |
| Catharanthus roseus (flower extract) | Magnoliopsida | SeVI | Reduction | Se0 NPs | Crystalline nanospheres | 17–34 | Extracellular | Deepa and Ganesan (2015) |
| Withania somnifera (leaf extract) | Eudicotyledoneae | H2SeO3 | Reduction | Se0 NPs | Amorphous and trigonal agglomerated nanospheres | 40–90 | Extracellular | Alagesan and Venugopal (2019) |
| Enicostema axillare (leaf extract) | Magnoliopsida | H2SeO3 | Reduction | Se0 NPs | Spherical nanoparticles | 56–98 | Extracellular | Perumal et al. (2021) |
Abbreviations: DMDSe, dimethyl diselenide; DMSe, dimethyl selenide.
FIGURE 1.

Biogenic Se0 particles: (A) Extracellular Se0 produced by a strain of Shewanella (related to Shewanella baltica) via extracellular respiration (personal archive of Dr Staicu; growth conditions detailed in Staicu et al. (2022)); (B) intracellular Se0 nanoparticles produced by the bacterial species Stenotrophomonas bentonitica (personal archive of Dr Merroun; growth conditions detailed in Ruiz‐Fresneda et al. [2018]).
For instance, a broad spectrum of bacterial species belonging to genera such as Bacillus subtilis, Bacillus cereus, Stenotrophomonas maltophilia, Stenotrophomonas bentonitica, Thauera selenatis, Ralstonia metallidurans or Geobacter sulfurreducens, have been reported to produce amorphous nanospheres ranging from 50 to 200 nm (Butler et al., 2012; Jia et al., 2022; Kora, 2018; Lampis et al., 2017; Pearce et al., 2009; Roux et al., 2001; Ruiz‐Fresneda et al., 2023). Less frequently, some bacteria have been reported to form crystalline NPs (monoclinic, trigonal allotropes) with different shapes (polygonal, nanorods, nanowires, hexagons, etc.). Interestingly, some microorganisms are able to crystallize NPs under mesophilic conditions without using any chemical agent or physical method. For instance, the bacterial species Bacillus subtilis and Stenotrophomonas bentonitica have been reported to reduce SeIV to Se0 amorphous nanospheres, which were transformed by the cells into crystalline nanostructures at room temperature. This is a huge advance over physico‐chemical methods and provides a promising option for the eco‐friendly formation of crystalline SeNPs.
Plants
The use of plant extracts also represents a good alternative to physico‐chemical methods for the synthesis of SeNPs. In addition, they offer a cost reduction compared to microbial‐based methods, which requires a final purification step to remove the cellular content. Plant extracts contain biomolecules (e.g., flavonoids, amino acids, proteins, polysaccharides, polyphenols, minerals, etc.) that can act as biodegradable and easily accessible reducing agents of Se to produce NPs. The general experimental setup is simple and inexpensive, mainly consisting of extracting the chosen part of the plant (fruit, leave, seed, peel, etc.), washing and drying, to finally crushing it vigorously. Subsequently, the plant extract is soaked in the solution with the Se feedstock. Leaf extracts from Withania somnifera (Fam. Solanaceae) produced amorphous and spherical SeNPs within the diameter range of 45–90 nm after exposure to seleniuos acid (H2SeO3) at room temperature (Alagesan & Venugopal, 2019). The leaf extract exhibited huge quantities of phytoconstituents (flavonoids, phenolics, tannins, and alkaloids) with reducing functional groups which may play a crucial role in NPs synthesis. Some of these compounds could act as natural stabilizers of the produced NPs due to their electron‐donating capability and capping properties, making them more attractive as antibacterial agents. Indeed, SeNPs (55–100 nm in size) synthesized following a similar method (H2SeO3 as Se source, room temperature, etc.) by leaf extract from Enicostema axillare (Fam. Gentianaceae) exhibited efficient antibacterial properties against a broad range of bacteria including B. subtilis, S. aureus, E. coli, Klebsiella pneumoniae (Perumal et al., 2021). Bacteria have also been reported to produce polysaccharides and protein‐capped SeNPs with potential medical purposes. The cells of Lactobacillus casei 393 form protein‐associated SeNPs with excellent antioxidative properties in intestinal epithelial cells and cytotoxic activity against HepG2 (liver hepatocellular carcinoma) cells (Xu et al., 2018). These findings propose capped‐SeNPs from L. casei 393 as a potential antioxidant and drug for hepatocellular carcinoma.
Fungi
In contrast to bacteria and plant extracts, a lower number of fungi were shown to synthesize SeNPs, mainly because they have low tolerance against selenium. However, a broad range of fungal species including filamentous fungi (Trichoderma, Aspergillus, etc.) and yeasts (Saccharomyces, Candida, etc.) have been reported in the last years to efficiently reduce Se oxyanions (Faramarzi et al., 2020; Herrero & Wellinger, 2015; Hussein et al., 2022; Liang et al., 2019). The molecular mechanisms proposed to be involved in the metabolic reduction pathway of inorganic Se to Se0 are very similar to those reported for bacteria (Herrero & Wellinger, 2015; Lampis & Vallini, 2021). Interestingly, rhizosphere fungi isolated from Se‐resistant plants in polluted sites are not inhibited in the presence of this element (Shoeibi et al., 2017). This tolerance could be related to long‐term adaptation to the Se present in the habitat (Shoeibi et al., 2017). Mariannaea sp. HJ, Trichoderma atroviride, Aspergillus oryzae, Aspergillus terreus, and Lentinula edodes are among the few known fungal species capable of reducing SeIV to Se0 particles. SeVI can be reduced as well by several fungal species. Rosenfeld et al. (2017) reported six different Ascomycete fungi (Pyrenochaeta sp. DS3sAY3a; Acremonium strictum DS1bioAY4a; Plectosphaerella cucumerina sp. DS2psM2A2; Stagonospora sp. SRC1lmsM3a; Alternaria alternat asp. SRC1lrK2f; and Paraconiothyrium sporulosum) capable of removing dissolved SeVI and SeIV from solution and producing Se0 biominerals. In spite of the limited number of Se‐reducing fungi, they exhibit exceptional protein secretion which may result in an increased production of NP in comparison to bacteria and other microorganisms (Joshi et al., 2019). Overall, spherical Se0 NPs were formed in all cases, most of them being crystalline in structure. This differs from other living organisms such as bacteria and plants, where most of the Se nanospheres produced are amorphous. One of the potential applications of fungal SeNPs that is being investigated is related to agricultural industry. The SeNPs produced by Trichoderma atroviride are a promising plant‐defensive strategy against fungal phytopathogens and provide an economic and eco‐friendly alternative to chemical fertilizers. They have been demonstrated to efficiently inhibit Pyricularia grisea, Colletotrichum capsici, Alternaria solani, which cause blast and early blight diseases, among other pathologies (Joshi et al., 2019). The results described here show that the number of Se‐reducing fungal species discovered is increasing significantly in recent years, whereas a few years ago not many species had been described.
Archaea
In comparison to bacteria, a limited number of reports have been published on the synthesis of SeNPs by Archaea. Specifically, most of archaea involved in Se reduction and SeNPs production belong to the salt‐resistant class haloarchaea, such as Halococcus salifodinae BK18, Halogeometricum sp., Halorubrum xinjiangense, or Halobacterium sp. SP1 (Abdollahnia et al., 2020; Güven et al., 2013; Naik et al., 2017; Srivastava et al., 2014). Halophilic Archaea are considered potential candidates for Se and other toxic substances tolerance because of their ability to survive under high stressful concentration of anions and cations. The Se reduction products derived from Halorubrum xinjiangense consist of intracellular spherical deposits with an amorphous nature. In contrast, the cells of Halococcus salifodinae BK18 and Halogeometricum sp. produced crystalline Se with hexagonal phase of different morphologies: nanorods and nanospheres for H. salifodinae BK18 and spherical shape for Halogeometricum sp. Although, from an industrial point of view, the synthesis process of SeNPs by archaea would require more complex conditions (high salt concentrations, temperatures, etc.), they provide an efficient option for bioremediation in extreme environments such as hypersaline habitats or marine sites, where few microorganisms can survive.
ALLOTROPIC TRANSITION
Most commonly, bacterially‐synthesized Se0 has an amorphous structure. Because this mineralogical phase is thermodynamically unstable, it undergoes a phase transition towards a more crystalline and thermodynamically‐stable state (Fernández‐Martínez & Charlet, 2009). This process is known as allotropic transition, and it shows a stark contrast between biogenic and chemogenic Se0. In the absence of a capping agent (e.g., Bovine Serum Albumin/BSA), chemogenic Se0 undergoes a quick transition towards crystalline states ranging from minutes to hours (Johnson et al., 2008). In contrast, biogenic Se0 exhibits a very slow allotropic transition (Figure 2). Fellowes et al. (2011) determined by XRD analysis that biogenic Se0 retained its amorphous structure after 58 days. This retardation may be associated with the biopolymer layer covering biogenic Se0 particles but a mechanistic explanation underlying this process was not proposed as yet. The biopolymer was shown to contain mainly proteins (Pearce et al., 2009; Staicu et al., 2015) and Extracellular Polymeric Substances (Jain et al., 2015). Bulgarini et al. (2021) performed an in‐depth study involving five phylogenetically‐diverse bacterial strains (Bacillus mycoides SeITE01, Stenotrophomonas maltophilia SeITE02, and three strains closely related to Achromobacter sp., Ensifer sp., and Lysinibacillus sp.) with the aim of characterizing the chemical composition of the biopolymer layer covering biogenic Se0 particles. The study identified carbohydrates, proteins and lipids present in the capping layer of biogenic Se0 with distinct, strain‐specific concentrations.
FIGURE 2.

Allotropic transition of biogenic red Se0 produced by Shewanella sp. O23S under anoxic (left cone) and oxic (right cone) conditions. Oxically‐sourced Se0 undergoes allotropic transition to black at the bottom of the cone, while the anoxic counterpart shows allotropic stability. (A) Day 1; (B) 6 months; (C) inset (panel B) of the cone tips after 6 months (personal archive of Dr Staicu). The incubation conditions are detailed in Staicu et al. (2022).
From a biological perspective, the allotropic transition of biogenic Se0 is an intriguing process. Amorphous Se0, irrespective of its diameter, is commonly round (globular), thus making it safe for the delicate cellular components, especially the plasma membrane. The transition to crystalline Se0 states entails the formation of structurally‐harmful nanorods (needle‐like structures). This might explain the stabilization of Se0 in its globular shape for a longer time frame than the growth cycle of the bacterial cell (e.g., months vs days). The formation of biogenic Se0 is a puzzling process in itself since this biomineralization product does not seem to have a biological function (discussed in Staicu & Barton, 2021). Thus, Se0 might be a byproduct of a detoxification mechanism (Ni et al., 2015) or of a respiratory process (Se oxyanions act as electron acceptors in anaerobic respiration, being reduced to Se0) (Staicu & Barton, 2021). Both detoxification and anaerobic respiration commonly lead to intracellular Se0, however, certain bacteria are capable of extracellular respiration (Gralnick & Newman, 2007), discarding the biomineralization byproducts in the vicinity or in the extracellular milieu (Staicu et al., 2022). From a more speculative perspective, biogenic Se0 might have an unknown biological function such as a density agent for anaerobic granules in upflow bioreactors or act as an electron donor/acceptor, analogous to S0 (Cosmidis & Benzerara, 2022; Staicu & Barton, 2021).
TOWARDS CIRCULAR ECONOMY: APPLICATIONS OF THE DIFFERENT SE ALLOTROPES
Treatment and decontamination of soils and wastewaters containing toxic Se and its recovery in form of non‐hazardous NPs has a huge potential within the concept of circular economy. The development of an efficient model for the recovery of Se and its use for the benefit of society would be of crucial importance. The authors propose herein a resource recovery framework of this element that could be of interest for the community (Figure 3).
FIGURE 3.

Se0 recovery and synthesis model from anthropogenic and natural sources of toxic Se (SeVI and SeIV).
It is well established that Se causes severe damage to biota and to human health depending on its chemical form, which deeply affects its toxicity. Specifically, Se oxidized forms (+VI and + IV) have been documented to be toxic due to their high solubility and bioavailability, while elemental Se0 is considered the least toxic due to the opposite, its solid state and low solubility. Se toxicity is due to its ability to substitute for sulfur (leading to dysfunctional macromolecules) and to the production on reactive oxygen species (ROS) (Ohlendorf et al., 2020). Selenium contamination of different environmental compartments (atmosphere, geosphere, hydrosphere) can originate from both anthropogenic and natural activities including mining, agricultural drainage water, fertilization, radioactive waste from power plants, petroleum refining, fossil fuel residues, or volcanic activities (Floor et al., 2013; Staicu et al., 2017; Wang et al., 2022) (Figure 3). Se oxyanions (+IV and + VI) are usually present at relatively low concentrations in nature (He et al., 2018; Wang et al., 2022). Concentrations ranging from 0.15 to 4.73 μg L−1 SeIV have been detected, for example, in ground waters from Chandigarh (India) (Bajaj et al., 2011). Higher amounts (around 341 μg L−1) were found, however, in ground waters from Jaipur (India), and in industrial wastewater from Japan, with a maximum level of 0.1 mg L−1 (Bajaj et al., 2011; Soda et al., 2011). However, release of Se and other contaminants into the environment is steadily increasing in the past years. For instance, Gerson et al. (2022) identified multiple anthropogenic sources of selenium release from coal wastes, mining activities being an important source of Se reaching the environment (Figure 3).
By transporting samples from contaminated environments or waste to laboratories and industrial facilities, chemical or biological processes can be employed for both bioremediation and NPs synthesis (Figure 3). As mentioned in the previous sections, SeIV and SeVI can be biologically and chemically transformed into insoluble and less toxic Se0, forming useful and applicable NPs. Both amorphous and crystalline SeNPs are widely used nowadays in many applications. They have been intensively investigated firstly for early applications in xerography (Li & Regensburger, 1963; Tang et al., 2006) to the current use in X‐ray imaging, photocells, rectifiers, solar cells, photographic exposure meters, pigment and glass production, etc. (Abbaszadeh & Huang, 2020; Ho et al., 2021; Panahi‐Kalamuei et al., 2015). One of the most promising research lines about SeNPs use is focused on their potential role as anti‐tumoral agents in several tumour types including lung, prostate, colorectal, cervical, and breast cancer (Cui et al., 2018; Hu et al., 2019; Liao et al., 2020; Xia et al., 2018). Although the specific molecular mechanisms are not fully understood, numerous studies reported that SeNPs can induce apoptosis of cancer cells inhibiting malignant tumours in different ways, with minimal effects on normal cells (Liao et al., 2020; Skalickova et al., 2017; Steinbrenner & Sies, 2009). Specifically, some proteins have been found to regulate crucial apoptotic pathways. Cruz et al. (2019) demonstrated the involvement of SeNPs in the caspase‐3 enzyme activation, ultimately leading to the blockage of cancer cell proliferation and their apoptosis in lung cancerous cell lines. SeNPs have been identified as well to exhibit cytotoxic activity against prostate tumour cells (Liao et al., 2020). The findings of Liao et al. (2020) suggested that SeNPs treatment in prostate tumours increased apoptosis rates by upregulating microRNA miR‐16 expression. Another important pathway to control cancer cell proliferation is related to the role of ROS. Chemically‐synthesized Glu‐SeNPs (glucose as reducing agent) with an amorphous nature quickly triggered intracellular ROS overproduction and mitochondria dysfunction leading to cellular death of hepatocellular carcinoma cells HepG2 (Nie et al., 2016). All these investigations on SeNPs provide new promising alternative therapies against a disease as harmful as cancer.
Although both crystalline and amorphous NPs are of interest, recent studies indicate that crystalline t‐Se NPs have different optical, thermodynamical, and electrical properties, which could make them more attractive in many fields. However, the unique properties of the most thermodynamically‐stable phase of Se (t‐Se), a layered Van der Waals solid, have not been deeply studied. For instance, crystalline Se capping topological insulators (TI) showed improved capability to preserve the intrinsic transport properties of TI in comparison with amorphous Se (Lin et al., 2018). In addition, Barman et al. (2022) recently observed high optical absorption coefficient and favourable transport properties of t‐Se ultrathin films, which make t‐Se attractive for the fabrication of photosensitive detector devices. Not only industrially, but also from an environmental point of view, crystalline Se has been described to be highly settleable and therefore more prone for separation/recovery than a‐Se (Lenz et al., 2009). This fact makes Se crystals more attractive for bioremediation purposes since they would entail easier recovery. To sum up, the structure of SeNPs (amorphous or crystalline) can considerably affect their application due to their different properties. Notably, the new potential contributions and applications of crystalline properties are being investigated in the last years. However, this is the first review in the literature reporting and comparing the most recent advances in crystalline and amorphous Se applications separately.
After experimental treatment in laboratories and industries, SeNPs must be extracted and purified, and subsequently “cleaned” soils and wastewaters could be returned to their original location (Figure 3). The current problem is that a fully effective method for SeNPs production and extraction, that can be applied in the environment, has not yet been proposed and validated. As cited in the present study, many investigations are trying to elucidate an effective methodology, whether biological, physical, or chemical, with the aim of solving this environmental problem and making profit at the same time. The proposed model recognizes the importance of the circular economy concept in addressing environmental challenges such as global pollution.
CONCLUSIONS AND FUTURE DIRECTIONS
This review provides an updated bibliographical survey on the physicochemical and biological methods used for the reduction of Se oxyanions and the production of SeNPs with different shape, size, and allotropy. In addition, the Se0 allotropic transition from amorphous to thermodynamically stable trigonal Se by different microbial strains was reviewed. This section is focused on underlying the gaps and perspectives both on Se reduction, Se allotropic biotransformation mechanisms and biotechnological applications of Se reduction products in the field of bioremediation, nanotechnology, and food industry.
An open question awaiting further investigation pertains to the origin of macromolecules capping biogenic SeNPs macromolecules. Some of them would have been involved in the biosynthesis of biogenic Se0, while others may have been acquired later from the internal or from the spent microbial media due to electrostatic interactions. A future study using transposon mutagenesis could identify the macromolecules involved in the biomineralization process by creating mutants lacking or having impaired capacity to produce Se0. In addition, further characterization of the molecular mechanisms of transport of biogenic SeNPs from the cytoplasm to extracellular space is needed to shed light on the microbial adaptation mechanisms to Se stress and the recovery of the intracellular and extracellular SeNPs for their industrial uses. Identification and characterization of proteins (e.g., flagella like proteins) involved in the transition of amorphous to trigonal Se could mimic cell properties and contribute to the fabrication of trigonal Se NPs without the use of microbial cells should be further investigated.
Immobilization of Se‐reducing microbial strains on different inorganic matrices through technologies like sol gel will be useful for the design of efficient and sustainable bioremediation approaches of Se contaminated waters. These immobilization approaches promote cell viability, mechanical stability, enhancing the Se elimination potential of the biomaterial. A controlled and up‐scalable route for the Se reduction using immobilized cells needs to be optimized. The bioremediation of Se through the immobilized Se reducing cells or their proteins would contribute to the recovery of Se as SeNPs with trigonal structure from wastes, and their reuse in different industrial fields within the concept of circular economy.
In addition to their potential use in bioremediation and nanotechnology, Se reducing microbes are very attractive in the food industry to meet the demand of Se supplementation for humans in Se‐deficient regions. However, this field is in its infancy and further research should be addressed. For instance, understanding the mechanisms of microbial fabrication of organic Se through the Se reducing ability of Se‐enriched lactic acid bacteria (LAB) deserve more attention. Specifically, targeting the fabrication of low toxic and high nutritional value Se compounds (e.g. selenocysteine, selenomethionine) needs to be further explored.
AUTHOR CONTRIBUTIONS
Miguel Angel Ruiz‐Fresneda: Conceptualization (equal); data curation (equal); formal analysis (equal); investigation (equal); methodology (equal); software (equal); supervision (equal); validation (equal); visualization (equal); writing – original draft (equal); writing – review and editing (equal). Lucian C. Staicu: Conceptualization (equal); data curation (equal); formal analysis (equal); investigation (equal); methodology (equal); supervision (equal); validation (equal); visualization (equal); writing – original draft (equal); writing – review and editing (equal). Guillermo Lazuén‐López: Data curation (equal); formal analysis (equal); investigation (equal); methodology (equal); software (equal); visualization (equal); writing – review and editing (equal). Mohamed Larbi Merroun: Conceptualization (equal); formal analysis (equal); funding acquisition (lead); investigation (equal); project administration (lead); resources (lead); supervision (lead); validation (equal); visualization (equal); writing – original draft (equal); writing – review and editing (equal).
FUNDING INFORMATION
This work was supported by grant RTI2018‐101548‐B‐I00 of MCIN/AEI/10.13039/501100011033/925 FEDER “Una manera de hacer Europa” (Ministerio de Ciencia e Innovación, Spain) to M.L.M. LS acknowledges the National Science Centre (NCN), Poland (grant 2017/26/D/ NZ1/00408) for financial support.
CONFLICT OF INTEREST
The authors declare that they have no conflict of interest.
ACKNOWLEDGMENTS
The authors would like to thank the microscopy services of the University of Granada (Centro de Instrumentación Científica, University of Granada, Spain) for their assistance. Paulina Joanna Wójtowicz from University of Warsaw is kindly acknowledged for her work on Se allotropy.
Ruiz‐Fresneda, M.A. , Staicu, L.C. , Lazuén‐López, G. & Merroun, M.L. (2023) Allotropy of selenium nanoparticles: Colourful transition, synthesis, and biotechnological applications. Microbial Biotechnology, 16, 877–892. Available from: 10.1111/1751-7915.14209
Contributor Information
Miguel A. Ruiz‐Fresneda, Email: mafres@ugr.es.
Mohamed L. Merroun, Email: merroun@ugr.es.
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