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Journal of Medical Genetics logoLink to Journal of Medical Genetics
. 1989 Dec;26(12):744–749. doi: 10.1136/jmg.26.12.744

Genetic studies on a new deficiency gene (PI*Ztun) at the PI locus.

D B Whitehouse 1, C M Abbott 1, J U Lovegrove 1, I McIntosh 1, C J McMahon 1, G Mieli-Vergani 1, A P Mowat 1, D A Hopkinson 1
PMCID: PMC1015753  PMID: 2575668

Abstract

During a study of the alpha 1 antitrypsin (AAT) protein and its locus (PI) by high resolution isoelectric focusing and direct molecular analysis of 106 PIZ probands and their families, a new allele (Ztun) was identified that resembles Z in many of its properties. Two sibs, both compound heterozygotes for Ztun and Z, showed similar evidence of mild liver involvement that was indistinguishable from that associated with classical ZZ homozygotes. The Ztun protein appeared to be deficient in the plasma to about the same degree as the Z protein. Allele specific oligonucleotide analysis of amplified genomic DNA indicated that the new allele is the result of a mutation in exon V that is identical to the classical G----A transition at codon 342 that results in the Glu----Lys substitution characteristic of the Z allele. An analysis of DNA haplotypes constructed from polymorphic restriction enzyme recognition sites in and around the PI locus confirmed that Ztun probably represents a new mutation at codon 342 that has occurred on an M2-like genetic background.

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Selected References

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  1. Abbott C. M., McMahon C. J., Kelsey G. D., Parkar M., Whitehouse D. B., Corney G., Povey S., Hopkinson D. A., Mieli-Vergani G., Mowat A. Alpha 1-antitrypsin-related gene (ATR) for prenatal diagnosis. Lancet. 1987 Jun 20;1(8547):1425–1426. doi: 10.1016/s0140-6736(87)90607-6. [DOI] [PubMed] [Google Scholar]
  2. Brantly M., Nukiwa T., Crystal R. G. Molecular basis of alpha-1-antitrypsin deficiency. Am J Med. 1988 Jun 24;84(6A):13–31. doi: 10.1016/0002-9343(88)90154-4. [DOI] [PubMed] [Google Scholar]
  3. Carrell R. W. alpha 1-Antitrypsin: molecular pathology, leukocytes, and tissue damage. J Clin Invest. 1986 Dec;78(6):1427–1431. doi: 10.1172/JCI112731. [DOI] [PMC free article] [PubMed] [Google Scholar]
  4. Cox D. W., Billingsley G. D., Mansfield T. DNA restriction-site polymorphisms associated with the alpha 1-antitrypsin gene. Am J Hum Genet. 1987 Nov;41(5):891–906. [PMC free article] [PubMed] [Google Scholar]
  5. Cox D. W., Levison H. Emphysema of early onset associated with a complete deficiency of alpha-1-antitrypsin (null homozygotes). Am Rev Respir Dis. 1988 Feb;137(2):371–375. doi: 10.1164/ajrccm/137.2.371. [DOI] [PubMed] [Google Scholar]
  6. Cox D. W., Woo S. L., Mansfield T. DNA restriction fragments associated with alpha 1-antitrypsin indicate a single origin for deficiency allele PI Z. Nature. 1985 Jul 4;316(6023):79–81. doi: 10.1038/316079a0. [DOI] [PubMed] [Google Scholar]
  7. Darlington G. J., Astrin K. H., Muirhead S. P., Desnick R. J., Smith M. Assignment of human alpha 1-antitrypsin to chromosome 14 by somatic cell hybrid analysis. Proc Natl Acad Sci U S A. 1982 Feb;79(3):870–873. doi: 10.1073/pnas.79.3.870. [DOI] [PMC free article] [PubMed] [Google Scholar]
  8. Eriksson S. Alpha 1-antitrypsin deficiency and liver cirrhosis in adults. An analysis of 35 Swedish autopsied cases. Acta Med Scand. 1987;221(5):461–467. [PubMed] [Google Scholar]
  9. Eriksson S., Carlson J., Velez R. Risk of cirrhosis and primary liver cancer in alpha 1-antitrypsin deficiency. N Engl J Med. 1986 Mar 20;314(12):736–739. doi: 10.1056/NEJM198603203141202. [DOI] [PubMed] [Google Scholar]
  10. Feinberg A. P., Vogelstein B. "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum. Anal Biochem. 1984 Feb;137(1):266–267. doi: 10.1016/0003-2697(84)90381-6. [DOI] [PubMed] [Google Scholar]
  11. Feldmann G., Martin J. P., Sesboue R., Ropartz C., Perelman R., Nathanson M., Seringe P., Benhamou J. P. The ultrastructure of hepatocytes in alpha-1-antitrypsin deficiency with the genotype Pi--. Gut. 1975 Oct;16(10):796–799. doi: 10.1136/gut.16.10.796. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Frants R. R., Eriksson A. W. Reliable classification of six Pi M subtypes by separator isoelectric focusing. Hum Hered. 1978;28(3):201–209. doi: 10.1159/000152959. [DOI] [PubMed] [Google Scholar]
  13. Garver R. I., Jr, Mornex J. F., Nukiwa T., Brantly M., Courtney M., LeCocq J. P., Crystal R. G. Alpha 1-antitrypsin deficiency and emphysema caused by homozygous inheritance of non-expressing alpha 1-antitrypsin genes. N Engl J Med. 1986 Mar 20;314(12):762–766. doi: 10.1056/NEJM198603203141207. [DOI] [PubMed] [Google Scholar]
  14. Kelsey G. D., Parkar M., Povey S. The human alpha-1-antitrypsin-related sequence gene: isolation and investigation of its expression. Ann Hum Genet. 1988 May;52(Pt 2):151–160. doi: 10.1111/j.1469-1809.1988.tb01091.x. [DOI] [PubMed] [Google Scholar]
  15. Kelsey G. D., Povey S., Bygrave A. E., Lovell-Badge R. H. Species- and tissue-specific expression of human alpha 1-antitrypsin in transgenic mice. Genes Dev. 1987 Apr;1(2):161–171. doi: 10.1101/gad.1.2.161. [DOI] [PubMed] [Google Scholar]
  16. Meisen C., Poller W., Olek K. DNA haplotyping of PI Z and M alleles within the German population. Am J Hum Genet. 1988 Dec;43(6):978–979. [PMC free article] [PubMed] [Google Scholar]
  17. Nukiwa T., Brantly M. L., Ogushi F., Fells G. A., Crystal R. G. Characterization of the gene and protein of the common alpha 1-antitrypsin normal M2 allele. Am J Hum Genet. 1988 Sep;43(3):322–330. [PMC free article] [PubMed] [Google Scholar]
  18. Nukiwa T., Satoh K., Brantly M. L., Ogushi F., Fells G. A., Courtney M., Crystal R. G. Identification of a second mutation in the protein-coding sequence of the Z type alpha 1-antitrypsin gene. J Biol Chem. 1986 Dec 5;261(34):15989–15994. [PubMed] [Google Scholar]
  19. Saiki R. K., Gelfand D. H., Stoffel S., Scharf S. J., Higuchi R., Horn G. T., Mullis K. B., Erlich H. A. Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase. Science. 1988 Jan 29;239(4839):487–491. doi: 10.1126/science.2448875. [DOI] [PubMed] [Google Scholar]
  20. Schroeder W. T., Miller M. F., Woo S. L., Saunders G. F. Chromosomal localization of the human alpha 1-antitrypsin gene (PI) to 14q31-32. Am J Hum Genet. 1985 Sep;37(5):868–872. [PMC free article] [PubMed] [Google Scholar]
  21. Sveger T. Prospective study of children with alpha 1-antitrypsin deficiency: eight-year-old follow-up. J Pediatr. 1984 Jan;104(1):91–94. doi: 10.1016/s0022-3476(84)80599-5. [DOI] [PubMed] [Google Scholar]
  22. Sveger T. The natural history of liver disease in alpha 1-antitrypsin deficient children. Acta Paediatr Scand. 1988 Nov;77(6):847–851. doi: 10.1111/j.1651-2227.1988.tb10767.x. [DOI] [PubMed] [Google Scholar]
  23. Whitehouse D. B., Lovegrove J. U., Hopkinson D. A. Variation in alpha-1-antitrypsin phenotypes associated with penicillamine therapy. Clin Chim Acta. 1989 Jan 13;179(1):109–115. doi: 10.1016/0009-8981(89)90028-4. [DOI] [PubMed] [Google Scholar]
  24. Yoshida A., Lieberman J., Gaidulis L., Ewing C. Molecular abnormality of human alpha1-antitrypsin variant (Pi-ZZ) associated with plasma activity deficiency. Proc Natl Acad Sci U S A. 1976 Apr;73(4):1324–1328. doi: 10.1073/pnas.73.4.1324. [DOI] [PMC free article] [PubMed] [Google Scholar]

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